CmoCh02G003240 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh02G003240
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	transcription factor bHLH121-like
Location	Cmo_Chr02: 1676112 .. 1678939 (+)
RNA-Seq Expression	CmoCh02G003240
Synteny	CmoCh02G003240

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATCAACGACGCGACGCTCCAATTCCGAATCCAGTCACACCCTCCATTGAGCTTTCAGGGCACCCAAATCGCTCCCAATCCAGTTCCAGGTCTGTTCTAGAATCCGCCATTTCAAATTCCTTTTGTTTTTCCGATGTATCGATCACTCCATTGAGCACGGCTAGGAACCACGACCTCCACATATGATATTGTCGGTTGGATGAAGAAGAAAAGTCCCACGTCGACTAGTTTAGGGAATAGTCTAGGGAATGATCTTGAGTTTATAAGTGAGGAATACTAACTTCATTGGTACGAGGCCTTGGGGAAGCCCAAAACAAAGCCATGAGAGCTTATGCTCAAAGTGGACAATATCATACCACGGTGGAGATCCGTGATTCCTAACATGGTATCATACCATTGTGGAAAGCCATTGTACTTTGTTCGAGGGGAGATGTTGGATGAAAAAAAAAAGTCCCACGTTGGCTAATTTAGGGAATGATGATGGGTTTATAAGTGGCTAATACGGGACTTCTCTCCCAACCATCCTCCCCTCGAACAAAGCACACCATAAGAGCCTCTTTTGAGGCGTATATAGCCGTCGAACAACCTCCCCTTAATCGAGACTTGATTCCTTCTCTAGAGCCCTCGAACAAATACACCATTTGTTCGACACTTGTGTCACCTTTAATAGAAGAATCGCGTGAGGTGATATAGATTTACTTTTATGTGCATACTAACAAGACTAGATGTGAGATTCCACGTCCGGAAAACGAAACATTTCTTATAAGAGTGTGGAAACCTCTCTCTATCAGACACATTTTAAAACTGTGAGGTTGACAATGATACGTAACGAGCCAAAGCGGACAATATATGCTAGTGGTGGGTTGGGCTGATACAATGGTATTAGAGCCATACACTGAGCAGTGTGCCAACCAGGATGCTGGGCCCCCAACGGGGTGGATTGTGAGATCTTACAACGGTTGAAGAGGAGAACGAAACATTTCTTATAAATGTTTGGAAACCTCTCCCTAAGAAACGCGTTTTAAAACCGTGAGGCTGACAATGATACGTAAGGGCCCAAAGTGGACATTACATGCTAGCGGTGGGCTTGGGCTGTTACAAATCGTATCAGAGCCAGACATCGAACATAGTGCCAGCGAGAATGTTGGGCCTCCATGCAGGGTGGATTATGAGATCCCTCATCGGTTAGAGAGGAGAACGAAACATTCCTTATAAGGGTGTGGAAACCTCTCCCTAACTGACATGTTTTAAAACCGTGAAGCTAACGACAATACGTAACGGACCAAAACGAACAATATCTGATAGCGATGAGCTTGGACTGTTACAAATGATATCAGAGCCAGACACCGAGCGGTGTGCCATCCAGGACACTGGGCCTCTAAGGGGGGCAGATTGTGAGATCCCACGTTGGTTGGAGAGGAGAACGAAACATTCCTTATAAGGGTGTGGAAACCTCTCCCTAACAGATGCATTTTAAAACTGTGAGGCTGACAACAATATGTAACTGTCCAAAGCGGACAATATCTGTTAGCGGTGGGCTTGGGCTGTTACAAATGGTATCAAAGCCAGACACGGAGCGATATGCCAGCAAGGATGCTGTCCTCCAAGAGGGGTGGATTGTGATATCCCACATCAGTTGGAGAGGAGAACAAAACATTCCTTATAAAGGTATGGAAACCTCTCTAGAACATACGTGTTTTAAAACTGTGAGGCTGACAGTAGTACGTAATAGGCCAAAACGGACAATATGTGCTAGCGACGATTATATTACTCCAAGAAGTTAATATTAGTTCATCATGCACTTTGGTTCACTTGCAGCTAGCCCAGGAAAAGAATGATCTAAGAGAAGAGAAGGCCTCACTCAAATCTGATATTGAGAATCTCAATTCTCAATATCAGCAAAGACTCATGGCTACTAACTCTATTGTCATGGCCCCTGCTCCCTTTCCATTTCCAATGCCAATGCCACCAGGGCCATTTCCTCTACATCCAACCTCGCAGCCTTACATGTTCTTCGGCAATCAAAATCCTGGAGTGATAGCAAACCCATGTTCCCCGTTCGTCCAATACATAGCTCCTAATTCCATGGCTGAGCAGCAGTCCTCCCGAAATGCACCGCCTTTCGTTCATCCAAGCAACCATGATTCGTCGTTCTCGAACGACACGAACAGGAACGAAAATAATCCATCAGAAGTAGAACTAGAGGAGAGTTCTTCAAGTGAATGTTCTTTATCTCGTAGTTTAGAGGCTAATTCGTTCAGTAGCACACTTAATGGACGAAAAACTACTTGATATATGTGGAAACACATAAAAGTTCAGATTCGCCCCAGATGGTATGATATTGTTCGCTTTGAGTATAAGCTCTCGTGGTTTTACTTTTAGTTTTCCTAAAAGGTCTCGTACCAATAGAGAAGTATTTTCTTACTTACTTACAAACTCATGATCAACCCCTTAATTAGCTGATGTCGTTGTTGATGTATGATAGATGATATTTGGTGTCAGAAGGAAATGACTCTGATATTATGTAGAGGTGAATGGATACATGCACGATATCACGAGGGATTATGTTCAAAATTTTGGAATCACGGGACGAGAGTTGTCGGTCTCGAGCTTGGTCGAGGGGGTGAGGCCATTAATGCTGCAGCTATCAAGAAGTTTGAAGGTCTTGAATGAAAGGTGGAAAGGCATTCAAATCAAGAGTGCCCAATACCAGATATATTTCAATTGGTTCACGGGACATAGAGAGTTGTGGAGCCCTCTATGTATGGCTTGAAATCTTCTTGGTCTTTATCTAGCAGCGTTGTGTAACGAAGATTTAGAGGAGC

mRNA sequence

ATGGATCAACGACGCGACGCTCCAATTCCGAATCCAGTCACACCCTCCATTGAGCTTTCAGGGCACCCAAATCGCTCCCAATCCAGTTCCAGGTCTGTTCTAGAATCCGCCATTTCAAATTCCTTTTGTTTTTCCGATCTAGCCCAGGAAAAGAATGATCTAAGAGAAGAGAAGGCCTCACTCAAATCTGATATTGAGAATCTCAATTCTCAATATCAGCAAAGACTCATGGCTACTAACTCTATTGTCATGGCCCCTGCTCCCTTTCCATTTCCAATGCCAATGCCACCAGGGCCATTTCCTCTACATCCAACCTCGCAGCCTTACATGTTCTTCGGCAATCAAAATCCTGGAGTGATAGCAAACCCATGTTCCCCGTTCGTCCAATACATAGCTCCTAATTCCATGGCTGAGCAGCAGTCCTCCCGAAATGCACCGCCTTTCGTTCATCCAAGCAACCATGATTCGTCGTTCTCGAACGACACGAACAGGAACGAAAATAATCCATCAGAAGTAGAACTAGAGGAGAGTTCTTCAAGTGAATGTTCTTTATCTCGTAGTTTAGAGGCTAATTCGTTCAGTAGCACACTTAATGGACGAAAAACTACTTGATATATGTGGAAACACATAAAAGTTCAGATTCGCCCCAGATGGTATGATATTGTTCGCTTTGAGTATAAGCTCTCGTGGTTTTACTTTTAGTTTTCCTAAAAGGTCTCGTACCAATAGAGAAGTATTTTCTTACTTACTTACAAACTCATGATCAACCCCTTAATTAGCTGATGTCGTTGTTGATGTATGATAGATGATATTTGGTGTCAGAAGGAAATGACTCTGATATTATGTAGAGGTGAATGGATACATGCACGATATCACGAGGGATTATGTTCAAAATTTTGGAATCACGGGACGAGAGTTGTCGGTCTCGAGCTTGGTCGAGGGGGTGAGGCCATTAATGCTGCAGCTATCAAGAAGTTTGAAGGTCTTGAATGAAAGGTGGAAAGGCATTCAAATCAAGAGTGCCCAATACCAGATATATTTCAATTGGTTCACGGGACATAGAGAGTTGTGGAGCCCTCTATGTATGGCTTGAAATCTTCTTGGTCTTTATCTAGCAGCGTTGTGTAACGAAGATTTAGAGGAGC

Coding sequence (CDS)

ATGGATCAACGACGCGACGCTCCAATTCCGAATCCAGTCACACCCTCCATTGAGCTTTCAGGGCACCCAAATCGCTCCCAATCCAGTTCCAGGTCTGTTCTAGAATCCGCCATTTCAAATTCCTTTTGTTTTTCCGATCTAGCCCAGGAAAAGAATGATCTAAGAGAAGAGAAGGCCTCACTCAAATCTGATATTGAGAATCTCAATTCTCAATATCAGCAAAGACTCATGGCTACTAACTCTATTGTCATGGCCCCTGCTCCCTTTCCATTTCCAATGCCAATGCCACCAGGGCCATTTCCTCTACATCCAACCTCGCAGCCTTACATGTTCTTCGGCAATCAAAATCCTGGAGTGATAGCAAACCCATGTTCCCCGTTCGTCCAATACATAGCTCCTAATTCCATGGCTGAGCAGCAGTCCTCCCGAAATGCACCGCCTTTCGTTCATCCAAGCAACCATGATTCGTCGTTCTCGAACGACACGAACAGGAACGAAAATAATCCATCAGAAGTAGAACTAGAGGAGAGTTCTTCAAGTGAATGTTCTTTATCTCGTAGTTTAGAGGCTAATTCGTTCAGTAGCACACTTAATGGACGAAAAACTACTTGA

Protein sequence

MDQRRDAPIPNPVTPSIELSGHPNRSQSSSRSVLESAISNSFCFSDLAQEKNDLREEKASLKSDIENLNSQYQQRLMATNSIVMAPAPFPFPMPMPPGPFPLHPTSQPYMFFGNQNPGVIANPCSPFVQYIAPNSMAEQQSSRNAPPFVHPSNHDSSFSNDTNRNENNPSEVELEESSSSECSLSRSLEANSFSSTLNGRKTT

Homology

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BLAST of CmoCh02G003240 vs. ExPASy Swiss-Prot
Match: Q9LT23 (Transcription factor bHLH121 OS=Arabidopsis thaliana OX=3702 GN=BHLH121 PE=1 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 2.1e-21
Identity = 89/233 (38.20%), Postives = 122/233 (52.36%), Query Frame = 0


Query: 18  ELSGHPNRSQSSSRSVLESAISNSFCFSDLAQEKNDLREEKASLKSDIENLNSQYQQRLM 77
           EL+   N+ +S   ++ + +        +L QEKNDLREEK SLKSDIENLN QYQQRL 
Sbjct: 107 ELTSEVNKLKSEYTALTDES-------RELTQEKNDLREEKTSLKSDIENLNLQYQQRLR 166

Query: 78  A--------TNSIVMAPAP-FPFPMP--MPPGPFPLHPTSQPYMFFGNQNPGVIANPCSP 137
           +         ++++MAP P FP+PMP  MPPG  P+HP+   Y +FGNQNP +I  PC  
Sbjct: 167 SMSPWGAAMDHTVMMAPPPSFPYPMPIAMPPGSIPMHPSMPSYTYFGNQNPSMIPAPCPT 226

Query: 138 FVQYIAPNSMAEQQS--------SRNAPPFVHPSNHD-SSFSNDTN-------------- 197
           ++ Y+ PN++ EQQS        +R+  P    S    S  + D+N              
Sbjct: 227 YMPYMPPNTVVEQQSVHIPQNPGNRSREPRAKVSRESRSEKAEDSNEVATQLELKTPGST 286

Query: 198 ----------------RNENNPSEVELEESS-SSECSLSRSLEANSFSSTLNG 200
                           RN NN S   +EESS SS+CS S S+  +S SS++ G
Sbjct: 287 SDKDTLQRPEKTKRCKRNNNNNS---IEESSHSSKCSSSPSVRDHSSSSSVAG 329

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BLAST of CmoCh02G003240 vs. ExPASy Swiss-Prot
Match: Q8W2F2 (Transcription factor bHLH11 OS=Arabidopsis thaliana OX=3702 GN=BHLH11 PE=2 SV=2)

HSP 1 Score: 45.4 bits (106), Expect = 8.7e-04
Identity = 22/31 (70.97%), Postives = 28/31 (90.32%), Query Frame = 0


Query: 46  DLAQEKNDLREEKASLKSDIENLNSQYQQRL 77
           +L QEK++LREEKA+LKSDIE LN+QYQ R+
Sbjct: 114 ELIQEKSELREEKATLKSDIEILNAQYQHRI 144

[Close]

BLAST of CmoCh02G003240 vs. ExPASy TrEMBL
Match: A0A6J1L585 (transcription factor bHLH121-like OS=Cucurbita maxima OX=3661 GN=LOC111500006 PE=4 SV=1)

HSP 1 Score: 296.2 bits (757), Expect = 1.0e-76
Identity = 181/267 (67.79%), Postives = 185/267 (69.29%), Query Frame = 0


Query: 1   MDQRRDAPIPNPVTPSIELSGHPNRSQSSSRSVLE---SAISNSFCFSD----------- 60
           MDQRRDAPIPNPVTPSIELSGHPNRSQSSSRS  E   SA + +   +D           
Sbjct: 6   MDQRRDAPIPNPVTPSIELSGHPNRSQSSSRSECELKDSAAARTVQKADREKLRRDRLNE 65

Query: 61  ----------------------------------------------------LAQEKNDL 120
                                                               LAQEKNDL
Sbjct: 66  QFVELGSVLDPDRPKNDKATILMDTIQLLKDLTSQVNKLKTEYATLTEESRELAQEKNDL 125

Query: 121 REEKASLKSDIENLNSQYQQRLMATNSIVMAPAPFPFPMPMPPGPFPLHPTSQPYMFFGN 180
           REEKASLKSDIENLNSQYQQRLMATNSIVMAPAPFPF  PMPP PFPLHPTSQPYMFFGN
Sbjct: 126 REEKASLKSDIENLNSQYQQRLMATNSIVMAPAPFPF--PMPPAPFPLHPTSQPYMFFGN 185

Query: 181 QNPGVIANPCSPFVQYIAPNSMAEQQSSRNAPPFVHPSNHDSSF--SNDTNRNENNPSEV 200
           QNP VIANPCSPFVQYIA NSMAEQQ+SRNAPPFVHPS HDSSF  SNDTN NENNPSEV
Sbjct: 186 QNPRVIANPCSPFVQYIAHNSMAEQQASRNAPPFVHPSKHDSSFEQSNDTNGNENNPSEV 245

[Close]

BLAST of CmoCh02G003240 vs. ExPASy TrEMBL
Match: A0A6J1G707 (transcription factor bHLH121-like OS=Cucurbita moschata OX=3662 GN=LOC111451335 PE=4 SV=1)

HSP 1 Score: 247.7 bits (631), Expect = 4.2e-62
Identity = 127/127 (100.00%), Postives = 127/127 (100.00%), Query Frame = 0


Query: 77  MATNSIVMAPAPFPFPMPMPPGPFPLHPTSQPYMFFGNQNPGVIANPCSPFVQYIAPNSM 136
           MATNSIVMAPAPFPFPMPMPPGPFPLHPTSQPYMFFGNQNPGVIANPCSPFVQYIAPNSM
Sbjct: 1   MATNSIVMAPAPFPFPMPMPPGPFPLHPTSQPYMFFGNQNPGVIANPCSPFVQYIAPNSM 60

Query: 137 AEQQSSRNAPPFVHPSNHDSSFSNDTNRNENNPSEVELEESSSSECSLSRSLEANSFSST 196
           AEQQSSRNAPPFVHPSNHDSSFSNDTNRNENNPSEVELEESSSSECSLSRSLEANSFSST
Sbjct: 61  AEQQSSRNAPPFVHPSNHDSSFSNDTNRNENNPSEVELEESSSSECSLSRSLEANSFSST 120

Query: 197 LNGRKTT 204
           LNGRKTT
Sbjct: 121 LNGRKTT 127

[Close]

BLAST of CmoCh02G003240 vs. ExPASy TrEMBL
Match: A0A1S3C6M9 (transcription factor bHLH121 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103497296 PE=4 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 1.7e-39
Identity = 114/212 (53.77%), Postives = 132/212 (62.26%), Query Frame = 0


Query: 46  DLAQEKNDLREEKASLKSDIENLNSQYQQRLMAT-------NSIVMAPAPFPFPMPM--P 105
           +LAQEK+DLREEKA LKSDIENLN+QYQQ+L AT       +S+VMAPAPFPFPMPM  P
Sbjct: 120 ELAQEKSDLREEKALLKSDIENLNAQYQQKLRATYPWAAMDHSVVMAPAPFPFPMPMQIP 179

Query: 106 PGPFPLHPTSQPYMFFGNQNPGVIANPCSPFVQYIAPNSMAEQQSSRNAPPFVHPSN--- 165
           PGP+PLHP+ QPY FFGN +P VIANPCS FV YI PNS+ EQQSS+NAPPF+   N   
Sbjct: 180 PGPYPLHPSLQPYTFFGNPDPRVIANPCSTFVPYIPPNSLTEQQSSQNAPPFIQLDNRSR 239

Query: 166 ----------------------------------------HDSSF--SNDTNRNENNPSE 204
                                                    D+S+  +ND NR E+N S 
Sbjct: 240 NLSEQNTGSKSSSESKIEKSVDSNEVATCLELKTPGSSTDQDTSYEQTNDKNRKESNLS- 299

[Close]

BLAST of CmoCh02G003240 vs. ExPASy TrEMBL
Match: A0A1S3C798 (transcription factor bHLH121 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103497296 PE=4 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 1.7e-39
Identity = 114/212 (53.77%), Postives = 132/212 (62.26%), Query Frame = 0


Query: 46  DLAQEKNDLREEKASLKSDIENLNSQYQQRLMAT-------NSIVMAPAPFPFPMPM--P 105
           +LAQEK+DLREEKA LKSDIENLN+QYQQ+L AT       +S+VMAPAPFPFPMPM  P
Sbjct: 74  ELAQEKSDLREEKALLKSDIENLNAQYQQKLRATYPWAAMDHSVVMAPAPFPFPMPMQIP 133

Query: 106 PGPFPLHPTSQPYMFFGNQNPGVIANPCSPFVQYIAPNSMAEQQSSRNAPPFVHPSN--- 165
           PGP+PLHP+ QPY FFGN +P VIANPCS FV YI PNS+ EQQSS+NAPPF+   N   
Sbjct: 134 PGPYPLHPSLQPYTFFGNPDPRVIANPCSTFVPYIPPNSLTEQQSSQNAPPFIQLDNRSR 193

Query: 166 ----------------------------------------HDSSF--SNDTNRNENNPSE 204
                                                    D+S+  +ND NR E+N S 
Sbjct: 194 NLSEQNTGSKSSSESKIEKSVDSNEVATCLELKTPGSSTDQDTSYEQTNDKNRKESNLS- 253

[Close]

BLAST of CmoCh02G003240 vs. ExPASy TrEMBL
Match: A0A6J1CXY9 (transcription factor bHLH121-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111015477 PE=4 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 5.1e-39
Identity = 117/239 (48.95%), Postives = 137/239 (57.32%), Query Frame = 0


Query: 18  ELSGHPNRSQSSSRSVLESAISNSFCFSDLAQEKNDLREEKASLKSDIENLNSQYQQRLM 77
           +L+   N+ ++ + ++ E +        +LAQEKNDLREEKASLKSDIENLN+QYQQRL 
Sbjct: 100 DLTSEVNKLKTENATLTEES-------RELAQEKNDLREEKASLKSDIENLNAQYQQRLR 159

Query: 78  AT-------NSIVMAPAPFPFPMP--MPPGPFPLHPTSQPYMFFGNQNPGVIANPCSPFV 137
           AT       +S+V+AP PFPFP+P  MPPGPFP+HP+ QPY F GN NPGVIANPCS FV
Sbjct: 160 ATYPWPAMDHSVVIAPPPFPFPVPMQMPPGPFPVHPSLQPYPFIGNHNPGVIANPCSTFV 219

Query: 138 QYIAPNSMAEQQSSRNAPPFVHPSN----------------------------------- 197
            YI PNS+ EQQSSRN PPFVHP N                                   
Sbjct: 220 PYITPNSVIEQQSSRNTPPFVHPGNQSRNLSKQDSGSKSSSESKIEKSVDSSEVATDLEL 279

Query: 198 --------HDSSF----SNDTNRNENNPSEVELEESSSSECSLSRSLEANSFSSTLNGR 201
                    D+SF    S    R ENN S    EES SS CS S SLE NS SST NG+
Sbjct: 280 KTPGSSTEQDTSFEQTNSKKMRRKENNKS----EESFSSRCSSSCSLEVNSSSSTANGK 327

[Close]

BLAST of CmoCh02G003240 vs. NCBI nr
Match: KAG6605005.1 (Transcription factor basic helix-loop-helix 121, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 297.4 bits (760), Expect = 9.7e-77
Identity = 186/290 (64.14%), Postives = 190/290 (65.52%), Query Frame = 0


Query: 1   MDQRRDAPIPNPVTPSIELSGHPNRSQSSSRSVLESAISNSFCF---------------- 60
           MDQRR   IPN VTPSIELSGHPNRSQSSS + L + IS  FCF                
Sbjct: 6   MDQRR--AIPNTVTPSIELSGHPNRSQSSSSNSLLAMIS-IFCFRCQRCECELKDSAAAR 65

Query: 61  ------------------------------------------------------------ 120
                                                                       
Sbjct: 66  RVQKADREKLRRDRLNEQFVELGRVLDPDRPKNDKATILVDAIQLLKDLTSQVNKLKTEY 125

Query: 121 -------SDLAQEKNDLREEKASLKSDIENLNSQYQQRLMATNSIVMAPA--PFPFPMPM 180
                   +LAQEKNDLREEKASLKSDIENLNSQYQQRLMATNSIVMAPA  PFP PMPM
Sbjct: 126 ATLTEESRELAQEKNDLREEKASLKSDIENLNSQYQQRLMATNSIVMAPAPLPFPMPMPM 185

Query: 181 PPGPFPLHPTSQPYMFFGNQNPGVIANPCSPFVQYIAPNSMAEQQSSRNAPPFVHPSNHD 204
           PPGPFPLHPTSQPYMFFGNQNPGVIANPCSPFVQYIAPNSMAEQQS+RNAPPFVHPSNHD
Sbjct: 186 PPGPFPLHPTSQPYMFFGNQNPGVIANPCSPFVQYIAPNSMAEQQSTRNAPPFVHPSNHD 245

[Close]

BLAST of CmoCh02G003240 vs. NCBI nr
Match: XP_023007544.1 (transcription factor bHLH121-like [Cucurbita maxima] >XP_023007545.1 transcription factor bHLH121-like [Cucurbita maxima])

HSP 1 Score: 296.2 bits (757), Expect = 2.2e-76
Identity = 181/267 (67.79%), Postives = 185/267 (69.29%), Query Frame = 0


Query: 1   MDQRRDAPIPNPVTPSIELSGHPNRSQSSSRSVLE---SAISNSFCFSD----------- 60
           MDQRRDAPIPNPVTPSIELSGHPNRSQSSSRS  E   SA + +   +D           
Sbjct: 6   MDQRRDAPIPNPVTPSIELSGHPNRSQSSSRSECELKDSAAARTVQKADREKLRRDRLNE 65

Query: 61  ----------------------------------------------------LAQEKNDL 120
                                                               LAQEKNDL
Sbjct: 66  QFVELGSVLDPDRPKNDKATILMDTIQLLKDLTSQVNKLKTEYATLTEESRELAQEKNDL 125

Query: 121 REEKASLKSDIENLNSQYQQRLMATNSIVMAPAPFPFPMPMPPGPFPLHPTSQPYMFFGN 180
           REEKASLKSDIENLNSQYQQRLMATNSIVMAPAPFPF  PMPP PFPLHPTSQPYMFFGN
Sbjct: 126 REEKASLKSDIENLNSQYQQRLMATNSIVMAPAPFPF--PMPPAPFPLHPTSQPYMFFGN 185

Query: 181 QNPGVIANPCSPFVQYIAPNSMAEQQSSRNAPPFVHPSNHDSSF--SNDTNRNENNPSEV 200
           QNP VIANPCSPFVQYIA NSMAEQQ+SRNAPPFVHPS HDSSF  SNDTN NENNPSEV
Sbjct: 186 QNPRVIANPCSPFVQYIAHNSMAEQQASRNAPPFVHPSKHDSSFEQSNDTNGNENNPSEV 245

[Close]

BLAST of CmoCh02G003240 vs. NCBI nr
Match: XP_022947480.1 (transcription factor bHLH121-like [Cucurbita moschata])

HSP 1 Score: 247.7 bits (631), Expect = 8.8e-62
Identity = 127/127 (100.00%), Postives = 127/127 (100.00%), Query Frame = 0


Query: 77  MATNSIVMAPAPFPFPMPMPPGPFPLHPTSQPYMFFGNQNPGVIANPCSPFVQYIAPNSM 136
           MATNSIVMAPAPFPFPMPMPPGPFPLHPTSQPYMFFGNQNPGVIANPCSPFVQYIAPNSM
Sbjct: 1   MATNSIVMAPAPFPFPMPMPPGPFPLHPTSQPYMFFGNQNPGVIANPCSPFVQYIAPNSM 60

Query: 137 AEQQSSRNAPPFVHPSNHDSSFSNDTNRNENNPSEVELEESSSSECSLSRSLEANSFSST 196
           AEQQSSRNAPPFVHPSNHDSSFSNDTNRNENNPSEVELEESSSSECSLSRSLEANSFSST
Sbjct: 61  AEQQSSRNAPPFVHPSNHDSSFSNDTNRNENNPSEVELEESSSSECSLSRSLEANSFSST 120

Query: 197 LNGRKTT 204
           LNGRKTT
Sbjct: 121 LNGRKTT 127

[Close]

BLAST of CmoCh02G003240 vs. NCBI nr
Match: XP_008457648.1 (PREDICTED: transcription factor bHLH121 isoform X1 [Cucumis melo])

HSP 1 Score: 172.6 bits (436), Expect = 3.6e-39
Identity = 114/212 (53.77%), Postives = 132/212 (62.26%), Query Frame = 0


Query: 46  DLAQEKNDLREEKASLKSDIENLNSQYQQRLMAT-------NSIVMAPAPFPFPMPM--P 105
           +LAQEK+DLREEKA LKSDIENLN+QYQQ+L AT       +S+VMAPAPFPFPMPM  P
Sbjct: 120 ELAQEKSDLREEKALLKSDIENLNAQYQQKLRATYPWAAMDHSVVMAPAPFPFPMPMQIP 179

Query: 106 PGPFPLHPTSQPYMFFGNQNPGVIANPCSPFVQYIAPNSMAEQQSSRNAPPFVHPSN--- 165
           PGP+PLHP+ QPY FFGN +P VIANPCS FV YI PNS+ EQQSS+NAPPF+   N   
Sbjct: 180 PGPYPLHPSLQPYTFFGNPDPRVIANPCSTFVPYIPPNSLTEQQSSQNAPPFIQLDNRSR 239

Query: 166 ----------------------------------------HDSSF--SNDTNRNENNPSE 204
                                                    D+S+  +ND NR E+N S 
Sbjct: 240 NLSEQNTGSKSSSESKIEKSVDSNEVATCLELKTPGSSTDQDTSYEQTNDKNRKESNLS- 299

[Close]

BLAST of CmoCh02G003240 vs. NCBI nr
Match: XP_008457649.1 (PREDICTED: transcription factor bHLH121 isoform X2 [Cucumis melo])

HSP 1 Score: 172.6 bits (436), Expect = 3.6e-39
Identity = 114/212 (53.77%), Postives = 132/212 (62.26%), Query Frame = 0


Query: 46  DLAQEKNDLREEKASLKSDIENLNSQYQQRLMAT-------NSIVMAPAPFPFPMPM--P 105
           +LAQEK+DLREEKA LKSDIENLN+QYQQ+L AT       +S+VMAPAPFPFPMPM  P
Sbjct: 74  ELAQEKSDLREEKALLKSDIENLNAQYQQKLRATYPWAAMDHSVVMAPAPFPFPMPMQIP 133

Query: 106 PGPFPLHPTSQPYMFFGNQNPGVIANPCSPFVQYIAPNSMAEQQSSRNAPPFVHPSN--- 165
           PGP+PLHP+ QPY FFGN +P VIANPCS FV YI PNS+ EQQSS+NAPPF+   N   
Sbjct: 134 PGPYPLHPSLQPYTFFGNPDPRVIANPCSTFVPYIPPNSLTEQQSSQNAPPFIQLDNRSR 193

Query: 166 ----------------------------------------HDSSF--SNDTNRNENNPSE 204
                                                    D+S+  +ND NR E+N S 
Sbjct: 194 NLSEQNTGSKSSSESKIEKSVDSNEVATCLELKTPGSSTDQDTSYEQTNDKNRKESNLS- 253

[Close]

BLAST of CmoCh02G003240 vs. TAIR 10
Match: AT3G19860.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 104.0 bits (258), Expect = 1.5e-22
Identity = 89/233 (38.20%), Postives = 122/233 (52.36%), Query Frame = 0


Query: 18  ELSGHPNRSQSSSRSVLESAISNSFCFSDLAQEKNDLREEKASLKSDIENLNSQYQQRLM 77
           EL+   N+ +S   ++ + +        +L QEKNDLREEK SLKSDIENLN QYQQRL 
Sbjct: 54  ELTSEVNKLKSEYTALTDES-------RELTQEKNDLREEKTSLKSDIENLNLQYQQRLR 113

Query: 78  A--------TNSIVMAPAP-FPFPMP--MPPGPFPLHPTSQPYMFFGNQNPGVIANPCSP 137
           +         ++++MAP P FP+PMP  MPPG  P+HP+   Y +FGNQNP +I  PC  
Sbjct: 114 SMSPWGAAMDHTVMMAPPPSFPYPMPIAMPPGSIPMHPSMPSYTYFGNQNPSMIPAPCPT 173

Query: 138 FVQYIAPNSMAEQQS--------SRNAPPFVHPSNHD-SSFSNDTN-------------- 197
           ++ Y+ PN++ EQQS        +R+  P    S    S  + D+N              
Sbjct: 174 YMPYMPPNTVVEQQSVHIPQNPGNRSREPRAKVSRESRSEKAEDSNEVATQLELKTPGST 233

Query: 198 ----------------RNENNPSEVELEESS-SSECSLSRSLEANSFSSTLNG 200
                           RN NN S   +EESS SS+CS S S+  +S SS++ G
Sbjct: 234 SDKDTLQRPEKTKRCKRNNNNNS---IEESSHSSKCSSSPSVRDHSSSSSVAG 276

[Close]

BLAST of CmoCh02G003240 vs. TAIR 10
Match: AT3G19860.2 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 104.0 bits (258), Expect = 1.5e-22
Identity = 89/233 (38.20%), Postives = 122/233 (52.36%), Query Frame = 0


Query: 18  ELSGHPNRSQSSSRSVLESAISNSFCFSDLAQEKNDLREEKASLKSDIENLNSQYQQRLM 77
           EL+   N+ +S   ++ + +        +L QEKNDLREEK SLKSDIENLN QYQQRL 
Sbjct: 107 ELTSEVNKLKSEYTALTDES-------RELTQEKNDLREEKTSLKSDIENLNLQYQQRLR 166

Query: 78  A--------TNSIVMAPAP-FPFPMP--MPPGPFPLHPTSQPYMFFGNQNPGVIANPCSP 137
           +         ++++MAP P FP+PMP  MPPG  P+HP+   Y +FGNQNP +I  PC  
Sbjct: 167 SMSPWGAAMDHTVMMAPPPSFPYPMPIAMPPGSIPMHPSMPSYTYFGNQNPSMIPAPCPT 226

Query: 138 FVQYIAPNSMAEQQS--------SRNAPPFVHPSNHD-SSFSNDTN-------------- 197
           ++ Y+ PN++ EQQS        +R+  P    S    S  + D+N              
Sbjct: 227 YMPYMPPNTVVEQQSVHIPQNPGNRSREPRAKVSRESRSEKAEDSNEVATQLELKTPGST 286

Query: 198 ----------------RNENNPSEVELEESS-SSECSLSRSLEANSFSSTLNG 200
                           RN NN S   +EESS SS+CS S S+  +S SS++ G
Sbjct: 287 SDKDTLQRPEKTKRCKRNNNNNS---IEESSHSSKCSSSPSVRDHSSSSSVAG 329

[Close]

BLAST of CmoCh02G003240 vs. TAIR 10
Match: AT4G36060.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 45.4 bits (106), Expect = 6.2e-05
Identity = 22/31 (70.97%), Postives = 28/31 (90.32%), Query Frame = 0


Query: 46  DLAQEKNDLREEKASLKSDIENLNSQYQQRL 77
           +L QEK++LREEKA+LKSDIE LN+QYQ R+
Sbjct: 114 ELIQEKSELREEKATLKSDIEILNAQYQHRI 144

[Close]

BLAST of CmoCh02G003240 vs. TAIR 10
Match: AT4G36060.2 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 45.4 bits (106), Expect = 6.2e-05
Identity = 22/31 (70.97%), Postives = 28/31 (90.32%), Query Frame = 0


Query: 46  DLAQEKNDLREEKASLKSDIENLNSQYQQRL 77
           +L QEK++LREEKA+LKSDIE LN+QYQ R+
Sbjct: 96  ELIQEKSELREEKATLKSDIEILNAQYQHRI 126

The following BLAST results are available for this feature:

BLAST of CmoCh02G003240 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LT23	2.1e-21	38.20	Transcription factor bHLH121 OS=Arabidopsis thaliana OX=3702 GN=BHLH121 PE=1 SV=...	[more]
Q8W2F2	8.7e-04	70.97	Transcription factor bHLH11 OS=Arabidopsis thaliana OX=3702 GN=BHLH11 PE=2 SV=2	[more]

BLAST of CmoCh02G003240 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1L585	1.0e-76	67.79	transcription factor bHLH121-like OS=Cucurbita maxima OX=3661 GN=LOC111500006 PE...	[more]
A0A6J1G707	4.2e-62	100.00	transcription factor bHLH121-like OS=Cucurbita moschata OX=3662 GN=LOC111451335 ...	[more]
A0A1S3C6M9	1.7e-39	53.77	transcription factor bHLH121 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103497296 ...	[more]
A0A1S3C798	1.7e-39	53.77	transcription factor bHLH121 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103497296 ...	[more]
A0A6J1CXY9	5.1e-39	48.95	transcription factor bHLH121-like isoform X1 OS=Momordica charantia OX=3673 GN=L...	[more]

BLAST of CmoCh02G003240 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6605005.1	9.7e-77	64.14	Transcription factor basic helix-loop-helix 121, partial [Cucurbita argyrosperma...	[more]
XP_023007544.1	2.2e-76	67.79	transcription factor bHLH121-like [Cucurbita maxima] >XP_023007545.1 transcripti...	[more]
XP_022947480.1	8.8e-62	100.00	transcription factor bHLH121-like [Cucurbita moschata]	[more]
XP_008457648.1	3.6e-39	53.77	PREDICTED: transcription factor bHLH121 isoform X1 [Cucumis melo]	[more]
XP_008457649.1	3.6e-39	53.77	PREDICTED: transcription factor bHLH121 isoform X2 [Cucumis melo]	[more]

BLAST of CmoCh02G003240 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G19860.1	1.5e-22	38.20	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT3G19860.2	1.5e-22	38.20	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT4G36060.1	6.2e-05	70.97	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT4G36060.2	6.2e-05	70.97	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 44..71
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..33
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 17..33
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 136..203
None	No IPR available	PANTHER	PTHR47001:SF3	TRANSCRIPTION FACTOR BHLH121	coord: 46..179
IPR044579	Transcription factor bHLH11/121	PANTHER	PTHR47001	TRANSCRIPTION FACTOR BHLH121	coord: 46..179

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh02G003240.1	CmoCh02G003240.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055072	iron ion homeostasis
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003700	DNA-binding transcription factor activity