CmoCh02G003180 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAATTCCCCGGCTAGCTATCGTTCTCTCCGTCCTCTTCCTCGTCTCCATATCGGCCCGTTCCGAGTACTACTCCAGAACTTCCCGGCGTGTTCATCTAAAACCCAAGGTAACCCATCTCCGTTTCTTCCTTTTCGACATCCTAAGCGGCGATAAACCCACCGCTGTCAAAGTTGCGCATTCGAACGTCACCTTTGGCACGTCTGTGATCCCATTCGGCACCGTCTACGCCATCGACGACCCGCTTCGAGAGGGACCCGAATATAATTCGACATTGATCGGCAATGCCAGGGGGATGTATATGTCAGCAAGTAGAGGCTCAGATTTTTGCTTGGTGATGTACATTGACTACGCTTTCACTGCCGGCAAGTTCAAGGGCAGCTCCATCAGTGTGTTTTCGAGGAACCCGGTGACGGAGACGAAACGGGAGGTGGCGGTTGTCGGCGGGCGAGGGAAGTTTAGGATGGCTCGAGGGTTTGCTAAGCTTAAGACACATTATTTGAATGTCAACAATGGTGATGCCATTATTGAATATGATGTTACTGTGTTTCATTATTGAGAGATTAGGAGAAGATGATAGCCGTTGGATTTTGAATTGTGACATCGAATCATTTGGTCTTAAGGATTGATTAATTACCTAATTATCCTTTTGCTAAATTAATAAAAATCTCTCTTTTTTTCTTTATAATTTATAATTTATACCTCTAAAATTAATTATCCGGGTATTTTTTAATTTTTTTTTAAATATAAAGGTATTTTTTGTAATAATTATTGATATAAAAAATATTATTATAATTAACGGTGAAACAAAACAATTATGATTACATTAGAGGTCGAATAAAAAAAATTATAAGAATCTAACTGAAAACGACTATCTTTACTCATATAAGAATCTAAGGAAAATAAAAAACAAAACCGTAAGAGTATTTAAAATGTTTTCTTTACTCATATACGTTATCTGTCTTACAGTCATGTTTGTCCAAAGCGTGTTGTCAATAACCATTGAAGAGGTATTATAGGGGATGTATTATAAGGGGATGCGACTAGTTTGAAGTTTAAGGGTATGTCTTAGAATGTACTACAAGGGGATGTGACTAGTCGTTAATTCTTCCTACCTTGAGTTGTATGTTATTCAAGTCGTGGTGTTTCTTTCTTTACTTATAGTTATATAAAACGTTGCTTCCAATTCTTTCAAACTCTCTTTACCCGTTTTATAAAACTTTTCTAAAAGCATGGTTAGAGGTTTGGGTATACGTCATCAAGTCAAGAGCAACACGATTTCGAGTTGGTTGACTCACTCGGTGGTTAGGGTGAGTATCACACAATCACTTACAAATGATTGCACGTGTTAGGCTAATTAAGGATGTTCTGCTATACTGTTAGTTTAAACAGGATTTGAACGTTATAACCTACCGTTCCTCTCGATTTGATATGAGTTTGAAACATGCATGCTTTCGCTCTTTTGCTTTAAAACGATGTCATCATTCCTATAAAAACGAGCACGTATCAATCTATAATTTTAAAAAGTCGGATCGTTACAAATCAATTAAATTATACGTGTAAAAATTTTATTTTATAAAGAAATTAAATAATTACTCCTAATGCCACCTAAACATCCCTTATTTGGCTAACAAGAGATTATAGCATTAAAGTGAAAATTTTGTTTTAAAAAAAATTAAAAAAATTACCTCTAATGTGTACTAAACATCCCTAAATAGGTTTATTTTAAAATAAAATTCCTTAAAAAGGTTATATCATTAAATTCATTGATTTTTTTTAATTTTACAATGAGAATAAAAAAATAAATAAATAAATAAAGAATTTGTTTGTTTGGTCTATAAATATTTTATATAATTCCTAAAATTTTAATTTTATTAATTTAGTTCATAAAATTTTAAAATGTTTTTTTTTTCGTTCTTTGTAAAATTTCAAAATATCAGAAAAATAAGATATAAATGAAATTAAAATTATAATAATAATATATATATATATATAAATGTTCACGTGGCCAGAAGGGAAAGATATCTCTATTTATTTAAATTTTCATCCCTATTAATTTTTTTCCGAATCATATATATATTAAAAAATATTTCTTTAAAAAAAATTAATTAATAATTTATCATTTTCTAAAAAAGGAATCCTAATAAATTCAATAATATTCGATAATTTAATGGGTAGAATATTACAGATCATATTTTTCAAACTAAAGTGGGTCCCACATCCACGTGGTGCATTCTTATTTTTCCACGTCAGTCATATTCTATAAATTAAATTAAAAAACAAAAAGAAAAACCGTCTCCTTTTCATTATAAAACCGCCTCGTCATCGTCTCCATCGCCACGACAAGCTCTGTTTTTACAGAGAAAAACAGAGTAAAACAGAGAAAAACAGAGGAAAAGAAAATGGCGAATCTTTCTATTTCATTTTTCTTCCTTTTTCTCCTCGCAGCTCTCCCATGGACTCGAACCCTCGAAGCGAAGAAAACCGTGCTTTGCAGACGCCATTGCCGGAAGCAGACCGTCACCAAGATCCAATTCTACTTCCACGACACCATCACCGGGAAGAATCCCTCCGCCATTAAGGTCGCAGAGGCCCCTTCCTCCACCAATTCACCGACGCTCTTCGGCACCGTGTCCATCGCCGACGACCCATTGACGGAAACGCCGGACCCGAAATCGAAGGAGGTGGGCAGGGCACAGGGGCTGTATTCGTCGGCCGCGCAGCAGGAGGTGGGTCTGCTCATGACACTGACCTATGTATTCACCGCCGGTAAGTTCAACGGCAGCTCCGTTGTTATTGTTGGGAAGAATTCGATTATGAATAAAGTCCGCGAATTGCCGGTGGTCGGAGGGACGGGGGCTTTCCGGTTCGCTCGTGGGTATGCTCTGGCGAGTACTTACTGGGCCAACAACGTTGGAGATGCAATTGTGGGTTATAATTTAACGGTTATACACTAA ATGGCAATTCCCCGGCTAGCTATCGTTCTCTCCGTCCTCTTCCTCGTCTCCATATCGGCCCGTTCCGAGTACTACTCCAGAACTTCCCGGCGTGTTCATCTAAAACCCAAGGTAACCCATCTCCGTTTCTTCCTTTTCGACATCCTAAGCGGCGATAAACCCACCGCTGTCAAAGTTGCGCATTCGAACGTCACCTTTGGCACGTCTGTGATCCCATTCGGCACCGTCTACGCCATCGACGACCCGCTTCGAGAGGGACCCGAATATAATTCGACATTGATCGGCAATGCCAGGGGGATGTATATGTCAGCAAGTAGAGGCTCAGATTTTTGCTTGGTGATGTACATTGACTACGCTTTCACTGCCGGCAAGTTCAAGGGCAGCTCCATCAGTGTGTTTTCGAGGAACCCGGTGACGGAGACGAAACGGGAGGTGGCGGTTGTCGGCGGGCGAGGGAAGTTTAGGATGGCTCGAGGGTTTGCTAAGCTTAAGACACATTATTTGAATGTCAACAATGCTCTCCCATGGACTCGAACCCTCGAAGCGAAGAAAACCGTGCTTTGCAGACGCCATTGCCGGAAGCAGACCGTCACCAAGATCCAATTCTACTTCCACGACACCATCACCGGGAAGAATCCCTCCGCCATTAAGGTCGCAGAGGCCCCTTCCTCCACCAATTCACCGACGCTCTTCGGCACCGTGTCCATCGCCGACGACCCATTGACGGAAACGCCGGACCCGAAATCGAAGGAGGTGGGCAGGGCACAGGGGCTGTATTCGTCGGCCGCGCAGCAGGAGGTGGGTCTGCTCATGACACTGACCTATGTATTCACCGCCGGTAAGTTCAACGGCAGCTCCGTTGTTATTGTTGGGAAGAATTCGATTATGAATAAAGTCCGCGAATTGCCGGTGGTCGGAGGGACGGGGGCTTTCCGGTTCGCTCGTGGGTATGCTCTGGCGAGTACTTACTGGGCCAACAACGTTGGAGATGCAATTGTGGGTTATAATTTAACGGTTATACACTAA ATGGCAATTCCCCGGCTAGCTATCGTTCTCTCCGTCCTCTTCCTCGTCTCCATATCGGCCCGTTCCGAGTACTACTCCAGAACTTCCCGGCGTGTTCATCTAAAACCCAAGGTAACCCATCTCCGTTTCTTCCTTTTCGACATCCTAAGCGGCGATAAACCCACCGCTGTCAAAGTTGCGCATTCGAACGTCACCTTTGGCACGTCTGTGATCCCATTCGGCACCGTCTACGCCATCGACGACCCGCTTCGAGAGGGACCCGAATATAATTCGACATTGATCGGCAATGCCAGGGGGATGTATATGTCAGCAAGTAGAGGCTCAGATTTTTGCTTGGTGATGTACATTGACTACGCTTTCACTGCCGGCAAGTTCAAGGGCAGCTCCATCAGTGTGTTTTCGAGGAACCCGGTGACGGAGACGAAACGGGAGGTGGCGGTTGTCGGCGGGCGAGGGAAGTTTAGGATGGCTCGAGGGTTTGCTAAGCTTAAGACACATTATTTGAATGTCAACAATGCTCTCCCATGGACTCGAACCCTCGAAGCGAAGAAAACCGTGCTTTGCAGACGCCATTGCCGGAAGCAGACCGTCACCAAGATCCAATTCTACTTCCACGACACCATCACCGGGAAGAATCCCTCCGCCATTAAGGTCGCAGAGGCCCCTTCCTCCACCAATTCACCGACGCTCTTCGGCACCGTGTCCATCGCCGACGACCCATTGACGGAAACGCCGGACCCGAAATCGAAGGAGGTGGGCAGGGCACAGGGGCTGTATTCGTCGGCCGCGCAGCAGGAGGTGGGTCTGCTCATGACACTGACCTATGTATTCACCGCCGGTAAGTTCAACGGCAGCTCCGTTGTTATTGTTGGGAAGAATTCGATTATGAATAAAGTCCGCGAATTGCCGGTGGTCGGAGGGACGGGGGCTTTCCGGTTCGCTCGTGGGTATGCTCTGGCGAGTACTTACTGGGCCAACAACGTTGGAGATGCAATTGTGGGTTATAATTTAACGGTTATACACTAA MAIPRLAIVLSVLFLVSISARSEYYSRTSRRVHLKPKVTHLRFFLFDILSGDKPTAVKVAHSNVTFGTSVIPFGTVYAIDDPLREGPEYNSTLIGNARGMYMSASRGSDFCLVMYIDYAFTAGKFKGSSISVFSRNPVTETKREVAVVGGRGKFRMARGFAKLKTHYLNVNNALPWTRTLEAKKTVLCRRHCRKQTVTKIQFYFHDTITGKNPSAIKVAEAPSSTNSPTLFGTVSIADDPLTETPDPKSKEVGRAQGLYSSAAQQEVGLLMTLTYVFTAGKFNGSSVVIVGKNSIMNKVRELPVVGGTGAFRFARGYALASTYWANNVGDAIVGYNLTVIH Homology
BLAST of CmoCh02G003180 vs. ExPASy Swiss-Prot
Match: Q84TH6 (Dirigent protein 23 OS=Arabidopsis thaliana OX=3702 GN=DIR23 PE=2 SV=1) HSP 1 Score: 186.0 bits (471), Expect = 6.9e-46 Identity = 87/149 (58.39%), Postives = 115/149 (77.18%), Query Frame = 0
BLAST of CmoCh02G003180 vs. ExPASy Swiss-Prot
Match: Q9FIG6 (Dirigent protein 1 OS=Arabidopsis thaliana OX=3702 GN=DIR1 PE=2 SV=1) HSP 1 Score: 172.2 bits (435), Expect = 1.0e-41 Identity = 83/149 (55.70%), Postives = 108/149 (72.48%), Query Frame = 0
BLAST of CmoCh02G003180 vs. ExPASy Swiss-Prot
Match: F4JUF8 (Dirigent protein 15 OS=Arabidopsis thaliana OX=3702 GN=DIR15 PE=3 SV=1) HSP 1 Score: 167.2 bits (422), Expect = 3.3e-40 Identity = 90/170 (52.94%), Postives = 121/170 (71.18%), Query Frame = 0
BLAST of CmoCh02G003180 vs. ExPASy Swiss-Prot
Match: Q9FIG7 (Dirigent protein 2 OS=Arabidopsis thaliana OX=3702 GN=DIR2 PE=2 SV=1) HSP 1 Score: 164.9 bits (416), Expect = 1.6e-39 Identity = 80/144 (55.56%), Postives = 103/144 (71.53%), Query Frame = 0
BLAST of CmoCh02G003180 vs. ExPASy Swiss-Prot
Match: Q67YM6 (Dirigent protein 11 OS=Arabidopsis thaliana OX=3702 GN=DIR11 PE=2 SV=1) HSP 1 Score: 157.1 bits (396), Expect = 3.4e-37 Identity = 77/145 (53.10%), Postives = 102/145 (70.34%), Query Frame = 0
BLAST of CmoCh02G003180 vs. ExPASy TrEMBL
Match: A0A5N5LFN0 (Dirigent protein OS=Salix brachista OX=2182728 GN=DKX38_014531 PE=3 SV=1) HSP 1 Score: 352.4 bits (903), Expect = 2.1e-93 Identity = 202/392 (51.53%), Postives = 249/392 (63.52%), Query Frame = 0
BLAST of CmoCh02G003180 vs. ExPASy TrEMBL
Match: A0A6J1G7L6 (Dirigent protein OS=Cucurbita moschata OX=3662 GN=LOC111451607 PE=3 SV=1) HSP 1 Score: 340.9 bits (873), Expect = 6.2e-90 Identity = 172/172 (100.00%), Postives = 172/172 (100.00%), Query Frame = 0
BLAST of CmoCh02G003180 vs. ExPASy TrEMBL
Match: A0A6J1G6X2 (Dirigent protein OS=Cucurbita moschata OX=3662 GN=LOC111451304 PE=3 SV=1) HSP 1 Score: 336.3 bits (861), Expect = 1.5e-88 Identity = 169/169 (100.00%), Postives = 169/169 (100.00%), Query Frame = 0
BLAST of CmoCh02G003180 vs. ExPASy TrEMBL
Match: A0A6J1I0B8 (Dirigent protein OS=Cucurbita maxima OX=3661 GN=LOC111469705 PE=3 SV=1) HSP 1 Score: 332.4 bits (851), Expect = 2.2e-87 Identity = 166/169 (98.22%), Postives = 168/169 (99.41%), Query Frame = 0
BLAST of CmoCh02G003180 vs. ExPASy TrEMBL
Match: A0A6J1I556 (Dirigent protein OS=Cucurbita maxima OX=3661 GN=LOC111469709 PE=3 SV=1) HSP 1 Score: 331.3 bits (848), Expect = 4.9e-87 Identity = 167/172 (97.09%), Postives = 169/172 (98.26%), Query Frame = 0
BLAST of CmoCh02G003180 vs. NCBI nr
Match: KAG7035032.1 (Dirigent protein 23, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 647.9 bits (1670), Expect = 4.9e-182 Identity = 337/370 (91.08%), Postives = 337/370 (91.08%), Query Frame = 0
BLAST of CmoCh02G003180 vs. NCBI nr
Match: KAF9676133.1 (hypothetical protein SADUNF_Sadunf09G0106500 [Salix dunnii]) HSP 1 Score: 358.2 bits (918), Expect = 7.7e-95 Identity = 204/396 (51.52%), Postives = 249/396 (62.88%), Query Frame = 0
BLAST of CmoCh02G003180 vs. NCBI nr
Match: KAG6761645.1 (hypothetical protein POTOM_034873 [Populus tomentosa]) HSP 1 Score: 354.0 bits (907), Expect = 1.5e-93 Identity = 199/405 (49.14%), Postives = 251/405 (61.98%), Query Frame = 0
BLAST of CmoCh02G003180 vs. NCBI nr
Match: KAB5541557.1 (hypothetical protein DKX38_014531 [Salix brachista]) HSP 1 Score: 352.4 bits (903), Expect = 4.2e-93 Identity = 202/392 (51.53%), Postives = 249/392 (63.52%), Query Frame = 0
BLAST of CmoCh02G003180 vs. NCBI nr
Match: KAG6762961.1 (hypothetical protein POTOM_033488 [Populus tomentosa]) HSP 1 Score: 351.7 bits (901), Expect = 7.2e-93 Identity = 198/401 (49.38%), Postives = 249/401 (62.09%), Query Frame = 0
BLAST of CmoCh02G003180 vs. TAIR 10
Match: AT2G21100.1 (Disease resistance-responsive (dirigent-like protein) family protein ) HSP 1 Score: 186.0 bits (471), Expect = 4.9e-47 Identity = 87/149 (58.39%), Postives = 115/149 (77.18%), Query Frame = 0
BLAST of CmoCh02G003180 vs. TAIR 10
Match: AT5G42510.1 (Disease resistance-responsive (dirigent-like protein) family protein ) HSP 1 Score: 172.2 bits (435), Expect = 7.3e-43 Identity = 83/149 (55.70%), Postives = 108/149 (72.48%), Query Frame = 0
BLAST of CmoCh02G003180 vs. TAIR 10
Match: AT4G38700.1 (Disease resistance-responsive (dirigent-like protein) family protein ) HSP 1 Score: 167.2 bits (422), Expect = 2.4e-41 Identity = 90/170 (52.94%), Postives = 121/170 (71.18%), Query Frame = 0
BLAST of CmoCh02G003180 vs. TAIR 10
Match: AT5G42500.1 (Disease resistance-responsive (dirigent-like protein) family protein ) HSP 1 Score: 164.9 bits (416), Expect = 1.2e-40 Identity = 80/144 (55.56%), Postives = 103/144 (71.53%), Query Frame = 0
BLAST of CmoCh02G003180 vs. TAIR 10
Match: AT1G22900.1 (Disease resistance-responsive (dirigent-like protein) family protein ) HSP 1 Score: 157.1 bits (396), Expect = 2.4e-38 Identity = 77/145 (53.10%), Postives = 102/145 (70.34%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|