CmoCh02G002680 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ACATTCCTTGATTTTGCATATCAACGAAGGCCAGCCTCACGCTTCTGCAGAAAATCAGTTCGACTATGGCAGCCACCCTCTCCGTCCGGCCTAACACCCCTGCCGCCGGTTCACCGTTCTCCCGACCGCCCTTCCGACGATCCGGCTCAACATTTCACGGTAGAACTGTTTCCTGGACCGGTGGTGTCCCTCCTCTCTGCCGTGAATATGCTAGGACGCTGCTGCTGCCGGTTCAGGCGAGCTCGCGCGCTGACGACTCGGCGCCGTCTGAGATGTCCCTCGAGAACGCGCTTAAGCTTCTTGGAGTCTCCGAAGGAGCCTCCTTCGATGAAATACTCCGCGCCAAGAATTCCATTCTTGCTACTTGCGGCGACGACAAGGGGATTGCTCAGGTGATGTATTGATCGTGGTTTGAGTGCCAGTTTTGTCTTGATTTTGGAAATTTCAATACCTGTTCTCATGCGTTGATGTCAATTTGGTTGTTTTGTGACTCAATTTTGATAGTTTCTGTATTTCTTACTTCGATCAGTGGAACCTAATAGTCTAGTATCAGTATGTTACGTAATAAATTCTCTTAGAGTTTGAATTAATTAACCAAAGTCTATCATATTGAACGCCATGCAAATATAGAAACAATTTCAACTTCTCCCCTCAAAAGTAAAAAGGGAGAAACCGGGGATTCAACCTCCTTTTAGTTAAAAATATGATTATATTTGGTTTTTCATTGCCTACTGTTCTGCCAAATGTCATTTATCACTTCTATAGCACAAGTCATTGTACTTGTCATTCCATTTAGCTGTTTTGTTAATAATCCATTAGGAAGGAGATTTATTTGTCATTTGGAGAAAATCCTCTGCCTGGTTGCTAAAGCACGATATTGGATATCCTGCACTTTTCATGGATGATTGGGCAAAATTGTTACATTCCCTGGGTGAACGTTTTATATTTCTCAAAGGTTCTAATACTGACAGGTTTTTTATTTGTTACAAATGATTTCATGTGTTTTATATTTTATTTGGAAGGTTTTCTAAATGAAGAACTAAGGACTATGCATCGATTCCATTCTGTCACTCGTTACATTTTTTATCCACTATAGCCTATATGGTAGGAAAGCCATAAACATCTCCTTGTTGCTATGCCAAATGTGTTTCAGGTTGAAGCTGCGTATGACATACTGCTGATGCAGAGCTTAACTCGGCGTCGAGCTGGGAAAGTTGAGAACAGTCGCATCCGGTATGCTGATGTGAAACCAGTAAATTCTCCTGGTGTAGGCTCAATGTCTCAGTGGCTGCGGAACGTGCCTGTTTCTGTAGAAACACCATCTACTGGTGACTTGGGCATACAAGCTGGTGTATATGGGGCATTAGCAGTCTTGACATATGTAAATGGAGCTGCTTCATCTTCTTCACTGCCTTATGCAGGTGCTGATGTTCCTGGACTGATCTTGGCTGGTAGCTTTGGAGCCTCCCTGTACTTTATGACCAAAAAGAACGTAAAATTAGGTAAGGAGTTTCACAAAGAAGGTTTACAATATATTGCTTATAAGTACTAGAAGAGTTTGATTATCATGAACTTGAGAATTCTCCACTGCAACCCATTATGATTAATGTTTTAGGGAAGTCCAAAGACCGGCTGAAGAACCATACTATTTATCTTTGAAGTTATATATAGCCTGCAAGAATCGTGGCTAAAAAAGTGAATGTAACTTGATTCTTTTTAAACATAATTTGAAATATGGGAGGATCTTTTAGATTTATTGCTATTTCGAAATCAAGTTACCATGTTCTATTGATTGGCTTATTGGTTATCTGAAGTTTTTTTTTTTCAGTGTAGACCTGAATAATCGAGCAAATTAGCTTTCTTGGTTGTGTGAAAGTTACATACAGAGGTCTCTTCTAATAATGATTCCGTTATTAATTCTGTAATCTATGTCTAAAAAGATCTTTAATATGTTAATTAAGTTTAAGAACGCTGAAAGCACTTTTCACACCTCAAGAACAATAATGCTTAATTTTACGAGACAGAATTGTTATTGTTATTAATTGGAGCCCAAGCTTTCAGAATTTCATAAGTTGAAACTCTTAATCGTTGAAGAACATATTTGACGTTAATTTTTTCCCTCTCATTGCAGGAAAGGCGACGGCGATAACACTAGGTGGCCTTGTGGCTGGTGCGGTAGTCGGTTCTGCAGTTGAGAGTTGGCTGCAGGTTGACATTGTTCCTTTCCTTGGTATACACTCTCCTGCTACTGTAGTAAGCGAATTCCTAATTTTATCCCAATTCTTGGTCTCTTTATACCTTAGATAGTGCTAATAATATATTGTAACTGCCCCTTCATTGTAGGAGTTGTAATTATTCATTTGCTCTATCACATGTTAGCTTTTTAAGGCTGTGTGCTTTTGGATGCACAAAAGTTCAATGAATTGTTGGGAATGACTTGTGTTTATAGTGAAGAACATAATAATCATCATATGTTCTCCATGTTGGATATGATTGTTCAAAATGTCCATTTGTCACAATTTCACTATATTGTTCTCATCTTCTTATATTCTCAACTTGTAGATTTTATAGGCTTCACAGGTCATTACTATAAGCCCATGGCAATTAAGCCTTCTTGGTTCGATATGGAGTTCATGATTTAGAACAGAAAAGAGAAAATGAAGTATGGCCAGAAGGTCGTGAAATTCAGTCATGCTATCCCTACTGTTCTTCCAGGTTTCTATTCAATTGCAATCACTTGGGATATACAATGGAACTGTTTAAGAGTCGATATCTTCTTGCTTAAGAATGGTCCCCCCGCCCCAAATGCCCCCCTGTAGTGCTTTGTTGAAAGGTTCATGTCAGGTGGCAAGGACTTGCCAATGACTTCTTGAGATCCTTGAGCTCCTTCTGTATTGTAGAATAGCTTCTTGAGATACCCCAGCTTTCTCAGCTTGCAGGGCCTTACAGAGGGAGGATAATTATAAAAGACATCCAC ACATTCCTTGATTTTGCATATCAACGAAGGCCAGCCTCACGCTTCTGCAGAAAATCAGTTCGACTATGGCAGCCACCCTCTCCGTCCGGCCTAACACCCCTGCCGCCGGTTCACCGTTCTCCCGACCGCCCTTCCGACGATCCGGCTCAACATTTCACGGTAGAACTGTTTCCTGGACCGGTGGTGTCCCTCCTCTCTGCCGTGAATATGCTAGGACGCTGCTGCTGCCGGTTCAGGCGAGCTCGCGCGCTGACGACTCGGCGCCGTCTGAGATGTCCCTCGAGAACGCGCTTAAGCTTCTTGGAGTCTCCGAAGGAGCCTCCTTCGATGAAATACTCCGCGCCAAGAATTCCATTCTTGCTACTTGCGGCGACGACAAGGGGATTGCTCAGGTTGAAGCTGCGTATGACATACTGCTGATGCAGAGCTTAACTCGGCGTCGAGCTGGGAAAGTTGAGAACAGTCGCATCCGGTATGCTGATGTGAAACCAGTAAATTCTCCTGGTGTAGGCTCAATGTCTCAGTGGCTGCGGAACGTGCCTGTTTCTGTAGAAACACCATCTACTGGTGACTTGGGCATACAAGCTGGTGTATATGGGGCATTAGCAGTCTTGACATATGTAAATGGAGCTGCTTCATCTTCTTCACTGCCTTATGCAGGTGCTGATGTTCCTGGACTGATCTTGGCTGGTAGCTTTGGAGCCTCCCTGTACTTTATGACCAAAAAGAACGTAAAATTAGGAAAGGCGACGGCGATAACACTAGGTGGCCTTGTGGCTGGTGCGGTAGTCGGTTCTGCAGTTGAGAGTTGGCTGCAGGTTGACATTGTTCCTTTCCTTGGTATACACTCTCCTGCTACTGTAGTAAGCGAATTCCTAATTTTATCCCAATTCTTGGTCTCTTTATACCTTAGATAGTGCTAATAATATATTGTAACTGCCCCTTCATTGTAGGAGTTGTAATTATTCATTTGCTCTATCACATGTTAGCTTTTTAAGGCTGTGTGCTTTTGGATGCACAAAAGTTCAATGAATTGTTGGGAATGACTTGTGTTTATAGTGAAGAACATAATAATCATCATATGTTCTCCATGTTGGATATGATTGTTCAAAATGTCCATTTGTCACAATTTCACTATATTGTTCTCATCTTCTTATATTCTCAACTTGTAGATTTTATAGGCTTCACAGGTCATTACTATAAGCCCATGGCAATTAAGCCTTCTTGGTTCGATATGGAGTTCATGATTTAGAACAGAAAAGAGAAAATGAAGTATGGCCAGAAGGTCGTGAAATTCAGTCATGCTATCCCTACTGTTCTTCCAGGTTTCTATTCAATTGCAATCACTTGGGATATACAATGGAACTGTTTAAGAGTCGATATCTTCTTGCTTAAGAATGGTCCCCCCGCCCCAAATGCCCCCCTGTAGTGCTTTGTTGAAAGGTTCATGTCAGGTGGCAAGGACTTGCCAATGACTTCTTGAGATCCTTGAGCTCCTTCTGTATTGTAGAATAGCTTCTTGAGATACCCCAGCTTTCTCAGCTTGCAGGGCCTTACAGAGGGAGGATAATTATAAAAGACATCCAC ATGGCAGCCACCCTCTCCGTCCGGCCTAACACCCCTGCCGCCGGTTCACCGTTCTCCCGACCGCCCTTCCGACGATCCGGCTCAACATTTCACGGTAGAACTGTTTCCTGGACCGGTGGTGTCCCTCCTCTCTGCCGTGAATATGCTAGGACGCTGCTGCTGCCGGTTCAGGCGAGCTCGCGCGCTGACGACTCGGCGCCGTCTGAGATGTCCCTCGAGAACGCGCTTAAGCTTCTTGGAGTCTCCGAAGGAGCCTCCTTCGATGAAATACTCCGCGCCAAGAATTCCATTCTTGCTACTTGCGGCGACGACAAGGGGATTGCTCAGGTTGAAGCTGCGTATGACATACTGCTGATGCAGAGCTTAACTCGGCGTCGAGCTGGGAAAGTTGAGAACAGTCGCATCCGGTATGCTGATGTGAAACCAGTAAATTCTCCTGGTGTAGGCTCAATGTCTCAGTGGCTGCGGAACGTGCCTGTTTCTGTAGAAACACCATCTACTGGTGACTTGGGCATACAAGCTGGTGTATATGGGGCATTAGCAGTCTTGACATATGTAAATGGAGCTGCTTCATCTTCTTCACTGCCTTATGCAGGTGCTGATGTTCCTGGACTGATCTTGGCTGGTAGCTTTGGAGCCTCCCTGTACTTTATGACCAAAAAGAACGTAAAATTAGGAAAGGCGACGGCGATAACACTAGGTGGCCTTGTGGCTGGTGCGGTAGTCGGTTCTGCAGTTGAGAGTTGGCTGCAGGTTGACATTGTTCCTTTCCTTGGTATACACTCTCCTGCTACTGTAGTAAGCGAATTCCTAATTTTATCCCAATTCTTGGTCTCTTTATACCTTAGATAG MAATLSVRPNTPAAGSPFSRPPFRRSGSTFHGRTVSWTGGVPPLCREYARTLLLPVQASSRADDSAPSEMSLENALKLLGVSEGASFDEILRAKNSILATCGDDKGIAQVEAAYDILLMQSLTRRRAGKVENSRIRYADVKPVNSPGVGSMSQWLRNVPVSVETPSTGDLGIQAGVYGALAVLTYVNGAASSSSLPYAGADVPGLILAGSFGASLYFMTKKNVKLGKATAITLGGLVAGAVVGSAVESWLQVDIVPFLGIHSPATVVSEFLILSQFLVSLYLR Homology
BLAST of CmoCh02G002680 vs. ExPASy Swiss-Prot
Match: G5DBJ0 (Protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic OS=Nicotiana benthamiana OX=4100 GN=CPP1 PE=1 SV=1) HSP 1 Score: 58.2 bits (139), Expect = 1.8e-07 Identity = 58/211 (27.49%), Postives = 97/211 (45.97%), Query Frame = 0
BLAST of CmoCh02G002680 vs. ExPASy Swiss-Prot
Match: Q9FN50 (Protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CPP1 PE=1 SV=1) HSP 1 Score: 57.4 bits (137), Expect = 3.1e-07 Identity = 63/236 (26.69%), Postives = 101/236 (42.80%), Query Frame = 0
BLAST of CmoCh02G002680 vs. ExPASy TrEMBL
Match: A0A6J1G8F2 (protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111451784 PE=4 SV=1) HSP 1 Score: 541.6 bits (1394), Expect = 2.0e-150 Identity = 283/283 (100.00%), Postives = 283/283 (100.00%), Query Frame = 0
BLAST of CmoCh02G002680 vs. ExPASy TrEMBL
Match: A0A6J1I2A1 (protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111469847 PE=4 SV=1) HSP 1 Score: 529.3 bits (1362), Expect = 1.0e-146 Identity = 277/283 (97.88%), Postives = 278/283 (98.23%), Query Frame = 0
BLAST of CmoCh02G002680 vs. ExPASy TrEMBL
Match: A0A0A0LJI1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G271400 PE=4 SV=1) HSP 1 Score: 472.2 bits (1214), Expect = 1.5e-129 Identity = 251/287 (87.46%), Postives = 263/287 (91.64%), Query Frame = 0
BLAST of CmoCh02G002680 vs. ExPASy TrEMBL
Match: A0A6J1FUF4 (protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111448892 PE=4 SV=1) HSP 1 Score: 469.9 bits (1208), Expect = 7.3e-129 Identity = 245/286 (85.66%), Postives = 263/286 (91.96%), Query Frame = 0
BLAST of CmoCh02G002680 vs. ExPASy TrEMBL
Match: A0A6J1JHP7 (protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111484593 PE=4 SV=1) HSP 1 Score: 463.0 bits (1190), Expect = 9.0e-127 Identity = 243/286 (84.97%), Postives = 261/286 (91.26%), Query Frame = 0
BLAST of CmoCh02G002680 vs. NCBI nr
Match: XP_022948098.1 (protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic-like [Cucurbita moschata]) HSP 1 Score: 541.6 bits (1394), Expect = 4.1e-150 Identity = 283/283 (100.00%), Postives = 283/283 (100.00%), Query Frame = 0
BLAST of CmoCh02G002680 vs. NCBI nr
Match: KAG7027031.1 (Protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 537.7 bits (1384), Expect = 5.9e-149 Identity = 281/283 (99.29%), Postives = 281/283 (99.29%), Query Frame = 0
BLAST of CmoCh02G002680 vs. NCBI nr
Match: XP_023533984.1 (protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 532.7 bits (1371), Expect = 1.9e-147 Identity = 279/283 (98.59%), Postives = 280/283 (98.94%), Query Frame = 0
BLAST of CmoCh02G002680 vs. NCBI nr
Match: XP_022971066.1 (protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic-like [Cucurbita maxima]) HSP 1 Score: 529.3 bits (1362), Expect = 2.1e-146 Identity = 277/283 (97.88%), Postives = 278/283 (98.23%), Query Frame = 0
BLAST of CmoCh02G002680 vs. NCBI nr
Match: KAG6604951.1 (Protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 508.4 bits (1308), Expect = 3.8e-140 Identity = 263/266 (98.87%), Postives = 265/266 (99.62%), Query Frame = 0
BLAST of CmoCh02G002680 vs. TAIR 10
Match: AT2G20920.1 (Protein of unknown function (DUF3353) ) HSP 1 Score: 317.4 bits (812), Expect = 1.2e-86 Identity = 169/231 (73.16%), Postives = 196/231 (84.85%), Query Frame = 0
BLAST of CmoCh02G002680 vs. TAIR 10
Match: AT5G23040.1 (Protein of unknown function (DUF3353) ) HSP 1 Score: 57.4 bits (137), Expect = 2.2e-08 Identity = 63/236 (26.69%), Postives = 101/236 (42.80%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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