CmoCh02G001250 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh02G001250
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
LocationCmo_Chr02: 643932 .. 647862 (-)
RNA-Seq ExpressionCmoCh02G001250
SyntenyCmoCh02G001250
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTGCTTGTGATTGTTTTGAAGCGCTCGGGTCTCTATTTCTTTGCTCCGTTTCGCTGTATCAGTGTCCTTGATCTCTCTTTCTCAGTGTAGGGAAGAAAATCTGAATCCATGGCTACCTTAGCGGCTACAGCAGTTCGTCAAGCCAGAGCCCTAACTCGGGTTTCCTCTCCTCAGTCAACCGCCACCCTTAATCAAAGGCGCGGTCTCGCTGGCGCTGCCGGTAGGTTTCATCTCTCGCTCGCATTCTTACGCATTTAGATCATCTGCTTATGTACCAATCCCATTTTCGGGTTTGTTCATTTTTTTTCTGACGAATTTTTGGTGTTTCGTTTCGAAATGGTAATCGTGGTCATATACTCCTTTCCCCGAGTTCTGTTTTAGGGTTGGCTAGCATTGATATGAGGATCTTGAAAATATGAAATGAATGTGCGAATTATTTTAGTTGTTGGAATGCGTTTTCCTAATTTGAGAACCCAATTTTGTAAGCGCAGATTTCACTCTTATTCTTCGATAACGAGGGTTCGTTGTCTAGAATTGAAAAGTGTGTGCTACATATAATTTAACTCAATTATGCATTGGAAACTTTGATATGAAATTTAAGATCCCTTTATAACCATTTCGTTTTTGTAAATTAAGCGTCCACCTATGAGAATTATACTTTTTGCATTTTTTTAATTTTGAAAGCTTGTTTTTTCCTTCTACAATTTGACTAAGAATTCAAACAATTATTTAAGAAAGGTAAAAACCACCATAAAGAAATGGTTTTCAAACGGGCCTAAAATTTGTATTTTTCTCGCACATGGTTACCTTATCGCTTGGTTTCATTGGGGACTGTCACTTTGCTATCGCCCTCATGGTGAAGAATAGAACAGGTAAAGTGAAATATAATGAAGGCATGTAAGTACTTTTTTCTGGGGAAAGAAACAATTCCATTTATGCATGAAATTACCAAAGAAGGGAGAAACCTCAAAGGGAGATGATTACAAAAAATCTCTCATGCTATGTAGGGCATGGTTGAGAGTGGTTTTAAGAACATGCCCATAGTTTTCTTTAAAATTAAACTTTCAGATTTTGTTTACAAGAATGCACTCTACACATGCATTTGAGCTCCTCTTGTAGTTCCTTTTGTAGTGTTTATATTGTGTTGGAAGAAGGATGAACCAATAGTCAAACATTAAAAGAAAAAAAGGGAAACATCAAAAGATGAAAGAATAATCCTTTTTCTTGTAAGTTTTGACTCTCTTTGTTGATATTTGCAGACCAACATGGACCGCCGAAGGTTAACTGTTGGCAAGATCCTATGAGCCCATCTAAATGGAAGGAAGAGCATGTGAGACTTACTGTTCTATATGAAATTAGTAGCTTCTTTTTCTTTCCGTTCTTTTGTTTTCCTGTCTTTTTCTTTTTTGACTTCCTATTTTATCTCAACAAGTAGTAGGATTTAATAATGAAACTAACAAAAATATTAACATTCTTAAGTTTTCTAACCAGGGTCTCTTTTTAATCTGTAATCAACTCAACAAAATACTCGATTTTATTGCTTAAGAGATAGGACGCAAGGGCACAGTTTGTAGTGTCAGTATTATAGACCAGTCTTTATTAATTTAGCTATAATTTGGAATTTATGGGATCGAATTAGGGCTAAATGCAGCTGTTTGTCTCATTGTATTACTTGTTTCTCTTCGCTCTGCATAGGATTTGATGTTGAAAATTATAATTCCTTTAAGTCAATATTTACACTGAAACTTATGAGTTTTATGCAGTTATGCACTCCTCTCCTTAAGTCTTCCTGTCGTGGAGAATAAATAAATGACGTGAATATCATACCTGTGCCGTATTTAGCTAATGAGCAAATTGAACTTGTTCTGACGGGATTGTGGACTTTTGCAGTTTGTGATTGTCTCTCTATCTGGATGGGGTCTACTTTTCTATGGAGGGTACAAGTTCTTTACCGGGGGCAAGGGAAAGAAGGATGAGGTACTTCTTTCCTTATTATCTATGCGCTCTTAATACTTAAACCGTCTTGGAAGTATTACAGGTGCTGTTAACTGAATATTATTTAATGATCATTGATTGGTGTTTATGCCTCATATTTCTGACGGAGTCAGCTTAAAAGTGCTGCCCTAGCGCTTTTCTTGGTTTTACCTTCATTTTAGCTGAGTAATTTTCTAATTTCCATGTCAGATGTAACGTGAAATGTTAGAAATAGGAAATGTTAAACCCGCCTGGAGTATTCTGGAATATTTGAAAATATAATACAAGGTCTAGAATTTATGTTTGTCAAGCAACATTAGACTACAATTGTTAGGCTCCTGTTGTCTGGAAAATGAAAAACATTTACCCGATTTCTCTCCTCTAATAACGTTACAGGATTATATCGTTTGCAAGTACGTCTACTTTTTGAATCATTTGGATCATTAGACATTGAGTATTTGTAACTTGTAACAGTATGAAGGTGGCGTAGTACAACCTAGATGTATCATTATGTAACTTTACACATGAATTTTTTCACAAGCTTTTGCTTCTCTCCTAAGTTTTTGCCCTTTGCTTTCAGAAACCTGGGGCAGCATCATAACGAGCTGAGCTATGGACATTTTCCGGCTGTTCTGAAGTTCTCCCCGAAATAATGTATACCTTAGACCTCTTGCTGTCTGCAATTTCATTTCACTCTTGAATTGTTTCTCGTATATGATCCTATCTCGTAGTTTTTTTCTCGACATTTTAGTTGTTTCATGCACGAAAGTCCTATATCTAATAATACAATTTGCCCCCAACACCTCATTCATAGAGTTCGAAGGGAGGGAATTTGTGCTCCGGAGCTTGTGATTGAACCAAGGCATTTTTGAGTAAAAAAAAACTCGGTTGATTGCTTTTTTTCGGATGACAGGTAACGAACGTTACGATGTGAATTGCTTTTTTTTTTCTTCAATTTCACAGTTAATGTGAAAGTAGTCGAGTAGAAAGTCTAGGTTTGATTACTCATAATTTAGTAACATGATCGAGCAAGCTCTATGCACTACAACACAACTAACACAACACCCATTTGCCTACTCAAATTATCAAAAAATAAACAACACTTGCATTTGATTTAGAACTCGTCCTCTGTCTCTTCCTTGTTTGTTTCTTCTTTAACGTCATCGCCCACATGAGAATTGGATTCCCTATTGAAATGACCATCGTCGTCCTGTTCTTGTTCCTGTTTTTCTTCACTTTTCTTCACTTTTAGCTCATTCTCTTCATCTGGGTTTTGCTTAATGCTATCATCTCCCACATCAGAATTGGATTCCCTATTCAATTCTTCTTCTTTTAACCTTTTGTTTTCCTCTTCTCTAGCTTCCTCTGGGTACTCTTTCATTTTCTCCTCATTGAATGTCCCTCCCTTAATGAACTTCCTATTGGTCGTGCTAGTAGCCACACTGTCTTCCAAATTTCTGTTGTTTTCCTGCTTCCTTTTCTTCGAAATCAGTCTCCATCCGTTATCCCCCGACCTTTTCTTGGCGATGTATCTCCATCTTTTTCCTCTCATCTTTCTCGTATGCCCATATTTGCCTGTTTCTGTTTTCATCTTCATCCCATCATTCAGGATCTTATCAGCTCTCTGATTTTCAATTGCTTCAGAATCATTACCTTCTTCCCCCTTGTGATCGTTGGTGATCTTAGATTCCTCGCCATCATCTTCAGAGCTCACTTGCTTCTGCACTTTCGCACCCTCTTTCTCCCTTCTTTCAGGGGTTTCCTCTGACTTTTGAGTTTCAGTTTCAGTTTCAGTTTCATCTCTTTTTGAAGTGCTTCCCTCGCTGAAGTCTGGTTTACTCTCTCCTCTGTTATTCTTCATTGATTCTAGCAATATCTCGCTTTGTTCTTCAATCTTTATTGAATCTTCATGTGGGTCTGATGGATCATTAGCAGCCACAGCTCCACGAGACTTAA

mRNA sequence

TTTGCTTGTGATTGTTTTGAAGCGCTCGGGTCTCTATTTCTTTGCTCCGTTTCGCTGTATCAGTGTCCTTGATCTCTCTTTCTCAGTGTAGGGAAGAAAATCTGAATCCATGGCTACCTTAGCGGCTACAGCAGTTCGTCAAGCCAGAGCCCTAACTCGGGTTTCCTCTCCTCAGTCAACCGCCACCCTTAATCAAAGGCGCGGTCTCGCTGGCGCTGCCGACCAACATGGACCGCCGAAGGTTAACTGTTGGCAAGATCCTATGAGCCCATCTAAATGGAAGGAAGAGCATTTTGTGATTGTCTCTCTATCTGGATGGGGTCTACTTTTCTATGGAGGGTACAAGTTCTTTACCGGGGGCAAGGGAAAGAAGGATGAGCCACAGCTCCACGAGACTTAA

Coding sequence (CDS)

ATGGCTACCTTAGCGGCTACAGCAGTTCGTCAAGCCAGAGCCCTAACTCGGGTTTCCTCTCCTCAGTCAACCGCCACCCTTAATCAAAGGCGCGGTCTCGCTGGCGCTGCCGACCAACATGGACCGCCGAAGGTTAACTGTTGGCAAGATCCTATGAGCCCATCTAAATGGAAGGAAGAGCATTTTGTGATTGTCTCTCTATCTGGATGGGGTCTACTTTTCTATGGAGGGTACAAGTTCTTTACCGGGGGCAAGGGAAAGAAGGATGAGCCACAGCTCCACGAGACTTAA

Protein sequence

MATLAATAVRQARALTRVSSPQSTATLNQRRGLAGAADQHGPPKVNCWQDPMSPSKWKEEHFVIVSLSGWGLLFYGGYKFFTGGKGKKDEPQLHET
Homology
[Close]
BLAST of CmoCh02G001250 vs. ExPASy TrEMBL
Match: A0A6J1I3K1 (uncharacterized protein LOC111469597 OS=Cucurbita maxima OX=3661 GN=LOC111469597 PE=4 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 2.6e-41
Identity = 87/90 (96.67%), Postives = 87/90 (96.67%), Query Frame = 0 

Query: 1  MATLAATAVRQARALTRVSSPQSTATLNQRRGLAGAADQHGPPKVNCWQDPMSPSKWKEE 60
          MATLAATAVRQARALTR SSPQSTATL QRRGLAGAAD HGPPKVNCWQDPMSPSKWKEE
Sbjct: 1  MATLAATAVRQARALTRASSPQSTATLIQRRGLAGAADHHGPPKVNCWQDPMSPSKWKEE 60

Query: 61 HFVIVSLSGWGLLFYGGYKFFTGGKGKKDE 91
          HFVIVSLSGWGLLFYGGYKFFTGGKGKKDE
Sbjct: 61 HFVIVSLSGWGLLFYGGYKFFTGGKGKKDE 90

[Close]
BLAST of CmoCh02G001250 vs. ExPASy TrEMBL
Match: A0A6J1FYP0 (uncharacterized protein LOC111448907 OS=Cucurbita moschata OX=3662 GN=LOC111448907 PE=4 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 4.1e-39
Identity = 83/90 (92.22%), Postives = 84/90 (93.33%), Query Frame = 0 

Query: 1  MATLAATAVRQARALTRVSSPQSTATLNQRRGLAGAADQHGPPKVNCWQDPMSPSKWKEE 60
          MATLAA A RQARALTRVSSPQS ATL QRRGLAGAAD HGPPKVNCW DPMSPSKWKEE
Sbjct: 1  MATLAAAAARQARALTRVSSPQSAATLIQRRGLAGAADHHGPPKVNCWSDPMSPSKWKEE 60

Query: 61 HFVIVSLSGWGLLFYGGYKFFTGGKGKKDE 91
          HFVIVSLSGWGLLF+GGYKFFTGGKGKKDE
Sbjct: 61 HFVIVSLSGWGLLFFGGYKFFTGGKGKKDE 90

[Close]
BLAST of CmoCh02G001250 vs. ExPASy TrEMBL
Match: A0A6J1CEY6 (uncharacterized protein LOC111011068 OS=Momordica charantia OX=3673 GN=LOC111011068 PE=4 SV=1)

HSP 1 Score: 167.5 bits (423), Expect = 2.6e-38
Identity = 82/90 (91.11%), Postives = 85/90 (94.44%), Query Frame = 0 

Query: 1  MATLAATAVRQARALTRVSSPQSTATLNQRRGLAGAADQHGPPKVNCWQDPMSPSKWKEE 60
          MATLAA AVRQARALTRVSSPQSTATL  RRGLAGAAD HGPPKVNCW+DPMSPSKWKEE
Sbjct: 1  MATLAAAAVRQARALTRVSSPQSTATLIHRRGLAGAADHHGPPKVNCWKDPMSPSKWKEE 60

Query: 61 HFVIVSLSGWGLLFYGGYKFFTGGKGKKDE 91
          HFVIVSLSGWGLLF+GGYKFFT GKGKK+E
Sbjct: 61 HFVIVSLSGWGLLFFGGYKFFTRGKGKKEE 90

[Close]
BLAST of CmoCh02G001250 vs. ExPASy TrEMBL
Match: A0A5A7U364 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold133G001630 PE=4 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 3.2e-36
Identity = 78/90 (86.67%), Postives = 81/90 (90.00%), Query Frame = 0 

Query: 1  MATLAATAVRQARALTRVSSPQSTATLNQRRGLAGAADQHGPPKVNCWQDPMSPSKWKEE 60
          MATLAA AVRQARAL RVSSPQSTA L  +RGLAGAAD HGPPKVNCWQDPMSPSKWKEE
Sbjct: 1  MATLAAAAVRQARALARVSSPQSTANLIHKRGLAGAADHHGPPKVNCWQDPMSPSKWKEE 60

Query: 61 HFVIVSLSGWGLLFYGGYKFFTGGKGKKDE 91
          HFV+VSLSGWGLL +GGYKFFT GKG KDE
Sbjct: 61 HFVLVSLSGWGLLIFGGYKFFTRGKGNKDE 90

[Close]
BLAST of CmoCh02G001250 vs. ExPASy TrEMBL
Match: A0A1S3BJS2 (uncharacterized protein LOC103490467 OS=Cucumis melo OX=3656 GN=LOC103490467 PE=4 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 7.2e-36
Identity = 77/90 (85.56%), Postives = 81/90 (90.00%), Query Frame = 0 

Query: 1  MATLAATAVRQARALTRVSSPQSTATLNQRRGLAGAADQHGPPKVNCWQDPMSPSKWKEE 60
          MATLAA AVRQARAL RVSSPQSTA L  +RGLAGAAD HGPPKVNCWQDPMSPSKWKEE
Sbjct: 1  MATLAAAAVRQARALARVSSPQSTANLIHKRGLAGAADHHGPPKVNCWQDPMSPSKWKEE 60

Query: 61 HFVIVSLSGWGLLFYGGYKFFTGGKGKKDE 91
          HFV+VSLSGWG+L +GGYKFFT GKG KDE
Sbjct: 61 HFVLVSLSGWGVLIFGGYKFFTRGKGNKDE 90

[Close]
BLAST of CmoCh02G001250 vs. NCBI nr
Match: KAG6604817.1 (hypothetical protein SDJN03_02134, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 177.9 bits (450), Expect = 4.0e-41
Identity = 87/90 (96.67%), Postives = 88/90 (97.78%), Query Frame = 0 

Query: 1  MATLAATAVRQARALTRVSSPQSTATLNQRRGLAGAADQHGPPKVNCWQDPMSPSKWKEE 60
          MATLAATAVRQARALTRVSSPQST+TL QRRGLAGAAD HGPPKVNCWQDPMSPSKWKEE
Sbjct: 1  MATLAATAVRQARALTRVSSPQSTSTLIQRRGLAGAADHHGPPKVNCWQDPMSPSKWKEE 60

Query: 61 HFVIVSLSGWGLLFYGGYKFFTGGKGKKDE 91
          HFVIVSLSGWGLLFYGGYKFFTGGKGKKDE
Sbjct: 61 HFVIVSLSGWGLLFYGGYKFFTGGKGKKDE 90

[Close]
BLAST of CmoCh02G001250 vs. NCBI nr
Match: KAG7034933.1 (hypothetical protein SDJN02_01726, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 177.9 bits (450), Expect = 4.0e-41
Identity = 87/90 (96.67%), Postives = 88/90 (97.78%), Query Frame = 0 

Query: 1  MATLAATAVRQARALTRVSSPQSTATLNQRRGLAGAADQHGPPKVNCWQDPMSPSKWKEE 60
          MATLAATAVRQARALTRVSSPQST+TL QRRGLAGAAD HGPPKVNCWQDPMSPSKWKEE
Sbjct: 1  MATLAATAVRQARALTRVSSPQSTSTLIQRRGLAGAADHHGPPKVNCWQDPMSPSKWKEE 60

Query: 61 HFVIVSLSGWGLLFYGGYKFFTGGKGKKDE 91
          HFVIVSLSGWGLLFYGGYKFFTGGKGKKDE
Sbjct: 61 HFVIVSLSGWGLLFYGGYKFFTGGKGKKDE 90

[Close]
BLAST of CmoCh02G001250 vs. NCBI nr
Match: XP_022970685.1 (uncharacterized protein LOC111469597 [Cucurbita maxima])

HSP 1 Score: 177.6 bits (449), Expect = 5.3e-41
Identity = 87/90 (96.67%), Postives = 87/90 (96.67%), Query Frame = 0 

Query: 1  MATLAATAVRQARALTRVSSPQSTATLNQRRGLAGAADQHGPPKVNCWQDPMSPSKWKEE 60
          MATLAATAVRQARALTR SSPQSTATL QRRGLAGAAD HGPPKVNCWQDPMSPSKWKEE
Sbjct: 1  MATLAATAVRQARALTRASSPQSTATLIQRRGLAGAADHHGPPKVNCWQDPMSPSKWKEE 60

Query: 61 HFVIVSLSGWGLLFYGGYKFFTGGKGKKDE 91
          HFVIVSLSGWGLLFYGGYKFFTGGKGKKDE
Sbjct: 61 HFVIVSLSGWGLLFYGGYKFFTGGKGKKDE 90

[Close]
BLAST of CmoCh02G001250 vs. NCBI nr
Match: XP_023532872.1 (uncharacterized protein LOC111794912 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 177.2 bits (448), Expect = 6.9e-41
Identity = 87/90 (96.67%), Postives = 87/90 (96.67%), Query Frame = 0 

Query: 1  MATLAATAVRQARALTRVSSPQSTATLNQRRGLAGAADQHGPPKVNCWQDPMSPSKWKEE 60
          MATLAA AVRQARALTRVSSPQSTATL QRRGLAGAAD HGPPKVNCWQDPMSPSKWKEE
Sbjct: 1  MATLAAAAVRQARALTRVSSPQSTATLIQRRGLAGAADHHGPPKVNCWQDPMSPSKWKEE 60

Query: 61 HFVIVSLSGWGLLFYGGYKFFTGGKGKKDE 91
          HFVIVSLSGWGLLFYGGYKFFTGGKGKKDE
Sbjct: 61 HFVIVSLSGWGLLFYGGYKFFTGGKGKKDE 90

[Close]
BLAST of CmoCh02G001250 vs. NCBI nr
Match: XP_022944460.1 (uncharacterized protein LOC111448907 [Cucurbita moschata])

HSP 1 Score: 170.2 bits (430), Expect = 8.4e-39
Identity = 83/90 (92.22%), Postives = 84/90 (93.33%), Query Frame = 0 

Query: 1  MATLAATAVRQARALTRVSSPQSTATLNQRRGLAGAADQHGPPKVNCWQDPMSPSKWKEE 60
          MATLAA A RQARALTRVSSPQS ATL QRRGLAGAAD HGPPKVNCW DPMSPSKWKEE
Sbjct: 1  MATLAAAAARQARALTRVSSPQSAATLIQRRGLAGAADHHGPPKVNCWSDPMSPSKWKEE 60

Query: 61 HFVIVSLSGWGLLFYGGYKFFTGGKGKKDE 91
          HFVIVSLSGWGLLF+GGYKFFTGGKGKKDE
Sbjct: 61 HFVIVSLSGWGLLFFGGYKFFTGGKGKKDE 90

[Close]
BLAST of CmoCh02G001250 vs. TAIR 10
Match: AT2G20820.1 (unknown protein; Has 44 Blast hits to 44 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 95.1 bits (235), Expect = 3.2e-20
Identity = 46/83 (55.42%), Postives = 59/83 (71.08%), Query Frame = 0 

Query: 6  ATAVRQARALTRVSSPQ---STATLNQRRGLAGAADQHGPPKVNCWQDPMSPSKWKEEHF 65
          A+  R+A +L ++ S +     A++ QRR LAGAAD HG  KV+ W+ P +P  WKEEHF
Sbjct: 2  ASFARRAMSLAQIPSARISSGAASIGQRRCLAGAADHHGSTKVDFWKQPTNPGNWKEEHF 61

Query: 66 VIVSLSGWGLLFYGGYKFFTGGK 86
          V++SLSGWGLLFY GYK  TGGK
Sbjct: 62 VLISLSGWGLLFYSGYKLATGGK 84

[Close]
BLAST of CmoCh02G001250 vs. TAIR 10
Match: AT2G20820.2 (unknown protein; Has 36 Blast hits to 36 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 55.5 bits (132), Expect = 2.8e-08
Identity = 27/61 (44.26%), Postives = 40/61 (65.57%), Query Frame = 0 

Query: 6  ATAVRQARALTRVSSPQ---STATLNQRRGLAGAADQHGPPKVNCWQDPMSPSKWKEEHF 64
          A+  R+A +L ++ S +     A++ QRR LAGAAD HG  KV+ W+ P +P  WKEEH+
Sbjct: 2  ASFARRAMSLAQIPSARISSGAASIGQRRCLAGAADHHGSTKVDFWKQPTNPGNWKEEHW 61

The following BLAST results are available for this feature:
BLAST of CmoCh02G001250 vs.
Match NameE-valueIdentityDescription
BLAST of CmoCh02G001250 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1I3K12.6e-4196.67uncharacterized protein LOC111469597 OS=Cucurbita maxima OX=3661 GN=LOC111469597... [more]
A0A6J1FYP04.1e-3992.22uncharacterized protein LOC111448907 OS=Cucurbita moschata OX=3662 GN=LOC1114489... [more]
A0A6J1CEY62.6e-3891.11uncharacterized protein LOC111011068 OS=Momordica charantia OX=3673 GN=LOC111011... [more]
A0A5A7U3643.2e-3686.67Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A1S3BJS27.2e-3685.56uncharacterized protein LOC103490467 OS=Cucumis melo OX=3656 GN=LOC103490467 PE=... [more]
BLAST of CmoCh02G001250 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6604817.14.0e-4196.67hypothetical protein SDJN03_02134, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG7034933.14.0e-4196.67hypothetical protein SDJN02_01726, partial [Cucurbita argyrosperma subsp. argyro... [more]
XP_022970685.15.3e-4196.67uncharacterized protein LOC111469597 [Cucurbita maxima][more]
XP_023532872.16.9e-4196.67uncharacterized protein LOC111794912 [Cucurbita pepo subsp. pepo][more]
XP_022944460.18.4e-3992.22uncharacterized protein LOC111448907 [Cucurbita moschata][more]
BLAST of CmoCh02G001250 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G20820.13.2e-2055.42unknown protein; Has 44 Blast hits to 44 proteins in 13 species: Archae - 0; Bac... [more]
AT2G20820.22.8e-0844.26unknown protein; Has 36 Blast hits to 36 proteins in 10 species: Archae - 0; Bac... [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 17..44
NoneNo IPR availablePANTHERPTHR35292:SF8SUBFAMILY NOT NAMEDcoord: 1..93
NoneNo IPR availablePANTHERPTHR35292EXPRESSED PROTEINcoord: 1..93

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh02G001250.1CmoCh02G001250.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane