CmoCh02G000560 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTGTTTCCAGACGCCTGGCCCTTTTTTCCCTCGGAACGATCCTTCTCTGCTTCTTGATCACCAGAGCCGCCGTAGCCGACTCCGACCACGGCCACAACGTTCACGTCGTCAGGTACTCCTCCGCCGCCACCGACGAGAGCGAAAAAGCTCACCAATGCAGACAAGAAAACGACGACGTTGACGACGATTTCGATGACACATACAAGATCGTGAACAACATCGCCATAACCCTATCGGCATCCGGCAGAATACTTAAGGAGGGGGCGGCGTAA ATGGCTGTTTCCAGACGCCTGGCCCTTTTTTCCCTCGGAACGATCCTTCTCTGCTTCTTGATCACCAGAGCCGCCGTAGCCGACTCCGACCACGGCCACAACGTTCACGTCGTCAGGTACTCCTCCGCCGCCACCGACGAGAGCGAAAAAGCTCACCAATGCAGACAAGAAAACGACGACGTTGACGACGATTTCGATGACACATACAAGATCGTGAACAACATCGCCATAACCCTATCGGCATCCGGCAGAATACTTAAGGAGGGGGCGGCGTAA ATGGCTGTTTCCAGACGCCTGGCCCTTTTTTCCCTCGGAACGATCCTTCTCTGCTTCTTGATCACCAGAGCCGCCGTAGCCGACTCCGACCACGGCCACAACGTTCACGTCGTCAGGTACTCCTCCGCCGCCACCGACGAGAGCGAAAAAGCTCACCAATGCAGACAAGAAAACGACGACGTTGACGACGATTTCGATGACACATACAAGATCGTGAACAACATCGCCATAACCCTATCGGCATCCGGCAGAATACTTAAGGAGGGGGCGGCGTAA MAVSRRLALFSLGTILLCFLITRAAVADSDHGHNVHVVRYSSAATDESEKAHQCRQENDDVDDDFDDTYKIVNNIAITLSASGRILKEGAA Homology
BLAST of CmoCh02G000560 vs. ExPASy TrEMBL
Match: A0A5D3CVV2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold552G00150 PE=4 SV=1) HSP 1 Score: 95.9 bits (237), Expect = 9.3e-17 Identity = 58/96 (60.42%), Postives = 69/96 (71.88%), Query Frame = 0
BLAST of CmoCh02G000560 vs. ExPASy TrEMBL
Match: A0A0A0KGZ4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G169270 PE=4 SV=1) HSP 1 Score: 87.0 bits (214), Expect = 4.3e-14 Identity = 54/95 (56.84%), Postives = 68/95 (71.58%), Query Frame = 0
BLAST of CmoCh02G000560 vs. ExPASy TrEMBL
Match: A0A2N9FLD3 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS15974 PE=4 SV=1) HSP 1 Score: 69.3 bits (168), Expect = 9.3e-09 Identity = 39/88 (44.32%), Postives = 57/88 (64.77%), Query Frame = 0
BLAST of CmoCh02G000560 vs. ExPASy TrEMBL
Match: A0A2P5B771 (Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_330420 PE=4 SV=1) HSP 1 Score: 64.7 bits (156), Expect = 2.3e-07 Identity = 41/94 (43.62%), Postives = 57/94 (60.64%), Query Frame = 0
BLAST of CmoCh02G000560 vs. ExPASy TrEMBL
Match: A0A2P5BI74 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_236950 PE=4 SV=1) HSP 1 Score: 61.6 bits (148), Expect = 1.9e-06 Identity = 40/94 (42.55%), Postives = 56/94 (59.57%), Query Frame = 0
BLAST of CmoCh02G000560 vs. NCBI nr
Match: KAG6604744.1 (hypothetical protein SDJN03_02061, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 174.5 bits (441), Expect = 4.2e-40 Identity = 91/91 (100.00%), Postives = 91/91 (100.00%), Query Frame = 0
BLAST of CmoCh02G000560 vs. NCBI nr
Match: KAG6570557.1 (hypothetical protein SDJN03_29472, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 107.1 bits (266), Expect = 8.3e-20 Identity = 60/93 (64.52%), Postives = 73/93 (78.49%), Query Frame = 0
BLAST of CmoCh02G000560 vs. NCBI nr
Match: KAA0054503.1 (hypothetical protein E6C27_scaffold24G002830 [Cucumis melo var. makuwa] >TYK14536.1 hypothetical protein E5676_scaffold552G00150 [Cucumis melo var. makuwa]) HSP 1 Score: 95.9 bits (237), Expect = 1.9e-16 Identity = 58/96 (60.42%), Postives = 69/96 (71.88%), Query Frame = 0
BLAST of CmoCh02G000560 vs. NCBI nr
Match: KAE8646929.1 (hypothetical protein Csa_021071 [Cucumis sativus]) HSP 1 Score: 87.0 bits (214), Expect = 8.9e-14 Identity = 54/95 (56.84%), Postives = 68/95 (71.58%), Query Frame = 0
BLAST of CmoCh02G000560 vs. NCBI nr
Match: PON44611.1 (hypothetical protein TorRG33x02_330420 [Trema orientale]) HSP 1 Score: 64.7 bits (156), Expect = 4.7e-07 Identity = 41/94 (43.62%), Postives = 57/94 (60.64%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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