CmoCh02G000030 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh02G000030
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Unknown protein
Location	Cmo_Chr02: 21694 .. 22320 (-)
RNA-Seq Expression	CmoCh02G000030
Synteny	CmoCh02G000030

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGCACGTGCAAAAATTCCAGGGTCAGGGTCAGGGTCAGGGTCAGGGTCGGGGTCAGGGTCAGAGAGCTCAACGCAAGTTATTCAAAGCAAGGCGAAGGCGGATTTATGGGTAAGATGGGAGGGGGGGTGGGACCCTACTGCTGACCATTTTGTCGACCGTCAACCTCCCTTTATGACCAGGCACTCTCTTCCTTAGCCGACATTCAAGCACCCCAGCTGTGTGCTGACGCAGGCAGTGACACAAACGCCTAAACACCCTCTTCACGTGTCCATATTCCATTCGTCACTCCCCTCCTCACTTACACCTAAACATTATTATTCATTTTTCCTTAATTAACGTTTTTCCAATATATTACTTGGGACTAAAAAAACAAAGACCATAAATTATTTTATTTATTATTATTTTTAGATTTGATAATGGCGTGGCATGTGTGTTTTGGGTTTGGGTTCTAGAAGATGAGAAGTCACCGAATTGGTTATATATATCTCTCATTCTTCCCCCTCTGTGCTCACCCATTCCTGAACCCAGCCGCCGCTCGCTCATCGGAGTTAGATCAGATCCGGCAACACGCCCACCCACACGAACAGAGCGGAGAAGCAGTTCCAAAGCACCAATCCGATAG

mRNA sequence

ATGTCGCACGTGCAAAAATTCCAGGGTCAGGGTCAGGGTCAGGGTCAGGGTCGGGGTCAGGGTCAGAGAGCTCAACGCAAGTTATTCAAAGCAAGGCGAAGGCGGATTTATGGATTTGATAATGGCGTGGCATGTGTGTTTTGGGTTTGGGTTCTAGAAGATGAGAAGTCACCGAATTGGTTATATATATCTCTCATTCTTCCCCCTCTGTGCTCACCCATTCCTGAACCCAGCCGCCGCTCGCTCATCGGAGTTAGATCAGATCCGGCAACACGCCCACCCACACGAACAGAGCGGAGAAGCAGTTCCAAAGCACCAATCCGATAG

Coding sequence (CDS)

ATGTCGCACGTGCAAAAATTCCAGGGTCAGGGTCAGGGTCAGGGTCAGGGTCGGGGTCAGGGTCAGAGAGCTCAACGCAAGTTATTCAAAGCAAGGCGAAGGCGGATTTATGGATTTGATAATGGCGTGGCATGTGTGTTTTGGGTTTGGGTTCTAGAAGATGAGAAGTCACCGAATTGGTTATATATATCTCTCATTCTTCCCCCTCTGTGCTCACCCATTCCTGAACCCAGCCGCCGCTCGCTCATCGGAGTTAGATCAGATCCGGCAACACGCCCACCCACACGAACAGAGCGGAGAAGCAGTTCCAAAGCACCAATCCGATAG

Protein sequence

MSHVQKFQGQGQGQGQGRGQGQRAQRKLFKARRRRIYGFDNGVACVFWVWVLEDEKSPNWLYISLILPPLCSPIPEPSRRSLIGVRSDPATRPPTRTERRSSSKAPIR

Homology

The following BLAST results are available for this feature:

BLAST of CmoCh02G000030 vs.


Match Name	E-value	Identity	Description

BLAST of CmoCh02G000030 vs.


Match Name	E-value	Identity	Description

BLAST of CmoCh02G000030 vs.


Match Name	E-value	Identity	Description

BLAST of CmoCh02G000030 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 92..108
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..21
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 78..108
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..27

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh02G000030.1	CmoCh02G000030.1	mRNA