CmoCh01G020670 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CCAAGTCTCACGTAATCAGGCCCACTGAAACTACCACCACTTTTGCTCCTCGTAGTTTCGGTCTTCGGAGAGCTCATCGCTGCGCCCAGAATCTAGAAGGGAGCGGAATCAAAGTTTCCGTCGATCACCTTGCAGTTGATTTCGCGATCGTTGACCATAGGAATTCTTGGTTGAAGAGCAATCTCTAAGCGTTTACGTGATCCGATTTATGGCGGAGCAGGAGAAAGAGAGGAATAAGTACAGTTTAATTGTCCCAACCTACAACGAGCGCCTCAATATTGCTCTTCTTGTTTACCTCATTTTCAAGCACCTCCCGTACGTATCCTTCTCTATAATTGCGATCTTAATTCGTTTCTTGTTTTTGGATTATTTCTTGATGAGGTAGATTTTTGCTGTACGCGTACTCGGTCAATTTTTTCGAAGCAAGTCTTCTTTTGTGTAGAACTGTAGTTCATTTAGTTGGAATTAAATCATGATTTTCTTGTAGTTCAATCTCTTTAGTCTTTTAGTGGGAAATAAACATTTCTTGAGGTTGAGAAGGATTCTCTGGTGAAATCATCTGGAGTCGTTGGATCGAATTATTATTCTCTTTGTACAATTGTATCGTTTTTGTTTAGCACAGACGAGAGTTGACAGTTCCTTCTTTTTTTTTTTTTTTTTTTTTTAACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAACACTACTGGGAGTCGAAATTGTAATGTATAACTTCTGCATCCTATTATCGTTCACCCTCCAGTTTTAAGAAAAGGAAATTGGAAATGACCTAGCACAATGTTTTCTTGGCGATATTAGGGATGTTGATTTTGAAGTAATTGTCGTTGATGATGGAAGTCCTGATGGTACTCAAGAAGTTGTGAAAGAGTTGCAAGGGGTATATGGTGAAGATCGCATTGTAAGTTCACTGTGCTTGGTTTCTGTAGTTGTTGCAGCAGAGGTTACTCTTTATCTTATTTTGTTTATTATTGTCTGCAGCTATTGAGAGCCAGACCTAGGAAGCTTGGCTTAGGTATGTAATAGAGTTTCTTCGTTGATAATATCACCGATCTTATATTGATGAATCATTAATTTCAGGAACGGCTTACTGTCACGGTCTCAAGCATGCAAGTGGTAATTTTGTTGTAATAATGGATGCTGATTTATCCCACCATGTAAGTGTTTCAGTAGGAGTGCAGAAAACTTCTATCAACAACATTCTAGTGTTGGATTTGTGATTTGAAATGTTTCCATGAGTTCCATTCTGCATTATCAAATGCCTATTTCCCTGACATTATTATCTTCCTATTTTATTAATTGACATCTCTTTTTTATATATAATTTAACAAAAAATAACGATAATAAGATTGAGATAAACTTCCTTGATCTTCATTTTAGGCCCCCAAAAAATATTCTAAATGGAAACTAAAGGAACTATCCAAAATTGTGGCTCTAATCTATGCTAGAACAGTAGATAATAACACTTTTAAGAATATAATAGGCGAATGTCAAATAATTGGAACAACACACGATTTTAGTTTGATTTCTTTAATAAATGGCCCTGTATAATGAGGTTTCGAGGGAAATGAGTTTTTCTTAACAATGAAAATCGAGTGACAAAAAAGTAGAATGAGTTTGTATTTCTGTATTATTTGGCTTCTATTGAAAAACTGTTGTATATTGGTACAAGAAACCCTGGCTCCCTCCAATCATATGAATGCTTCTATTTAATAATATGTTTTTGCCTCTGACTTGCGCTACTTGAGACATCAAATTGGCAAATGCCATCCGAACTTCTACTTTCATCTAGCATATCTTTACTTCTAAAGCTCAATTTCCAAAAACTTCCATAAGCATGTTTGGAGTTCCAAGGGTTTAATTCCCCCTCCCTGTTGTTTTCTTATGATGCTTTCTCCATGGAATAACCTTTTCTTTTTCTTTCTTTTGTTTGGCAGCCCAAATATTTACCAAGCTTCATTCGGTAGGACAGACTTCCTTCCATTACCTCACTCCACTTCCTTAGCTCAGAGTCATAATAACTAAACTCTAGATATTATTGACTACTTATTTAAATCCTTTTTTTCTTTTTCCCTATAGGAAACAGTTACAAACGGGTGCTGATATAGTTACAGGCACCCGATATGTGAAAGGTGGCGGTGTGCATGGATGGAATCTTATGCGCAAACTAACAAGTAGAGGAGCTAATGTTCTTGCCCAAACACTTTTATGGCCTGGTGTATCAGATTTAACTGGATCTTTCCGGTAATCAATTTTTTTTCCTTTCAATTTATCAACTGTGTCAATCGTTCATACTTCTACAATTCTTAGTCAATGATTTATTCCTATGTGTAGGCTCTACAAGAAATCGGTGCTTGAAGATATCATTAGCTCAGTTGTTAGCAAGGGATATGTCTTTCAAATGGAGATGATTGTTCGAGCTACAAGAAAAGGCTATCACATTGAAGAGGTAGAGTTGTGCCCTGTGGCTGCGACAATCTAATTGTTGTTTTACAGTACTCTTTTCCCTTCATTTTTGCCTATCGTGGGATCTAGAACACCTTAGTTGTTAAGTGTAACGACCCAGGCCCACTGCTAGCAGATATTGTCCTCTTTGGGCTTTCCCTTTCGGGCTTCCCCTCGAGGTTTTAAAACGCGTCTGCTAGGGGAAGGTTTCCACACCCTTATAAATGGTGGTTTGTTCTCCTCCTCAACCAATGTGGCACATCACATTAAGTGTTTGAATAAGAATGTTTTTTCAATTTTTATTTTTCTTGGCCCTTTAGACCGTATTACACGGGGAAATTTGAGATGATTTGTGTTTCATTGTGGCCTGCAGGTTCCAATAACCTTTGTTGATAGAGTGTTTGGAATTTCCAAGCTTGGAGGATCTGAAGTAGTAGAGTATTTGAAAGGTCTGTTGTACCTTTTGGTCACCACATGATACACAAAATAGTGAAAATTTATTGAGTTACAACCAGGTAAGCTTCTTGATTGATTTCTGGTTAGGTACCCACCACCTCCAGGCTTTTGATGTAAACTTGAGATGATATTTCCTAATTAGGGGTTTTCCCGCAATTTTCCTTACAAATCAAAACCACAACTGCGAGCTTATTTGGTTCATGCTAGGTATTGTATTCCATGTTTATTTAGGTATTGTACTCCATGTTTATTTTGTAGGATACCTCCTTTGTCTGGCGGGTTTTTCTTCCTTTCAACATTAACTTGTACTACATTTCATTTACATACATTCATTGAAACTAGAATTAGATCAAAGTCTAATTAGCTTTGATG CCAAGTCTCACGTAATCAGGCCCACTGAAACTACCACCACTTTTGCTCCTCGTAGTTTCGGTCTTCGGAGAGCTCATCGCTGCGCCCAGAATCTAGAAGGGAGCGGAATCAAAGTTTCCGTCGATCACCTTGCAGTTGATTTCGCGATCGTTGACCATAGGAATTCTTGGTTGAAGAGCAATCTCTAAGCGTTTACGTGATCCGATTTATGGCGGAGCAGGAGAAAGAGAGGAATAAGTACAGTTTAATTGTCCCAACCTACAACGAGCGCCTCAATATTGCTCTTCTTGTTTACCTCATTTTCAAGCACCTCCCGGATGTTGATTTTGAAGTAATTGTCGTTGATGATGGAAGTCCTGATGGTACTCAAGAAGTTGTGAAAGAGTTGCAAGGGGTATATGGTGAAGATCGCATTCTATTGAGAGCCAGACCTAGGAAGCTTGGCTTAGGAACGGCTTACTGTCACGGTCTCAAGCATGCAAGTGGTAATTTTGTTGTAATAATGGATGCTGATTTATCCCACCATCCCAAATATTTACCAAGCTTCATTCGGAAACAGTTACAAACGGGTGCTGATATAGTTACAGGCACCCGATATGTGAAAGGTGGCGGTGTGCATGGATGGAATCTTATGCGCAAACTAACAAGTAGAGGAGCTAATGTTCTTGCCCAAACACTTTTATGGCCTGGTGTATCAGATTTAACTGGATCTTTCCGGCTCTACAAGAAATCGGTGCTTGAAGATATCATTAGCTCAGTTGTTAGCAAGGGATATGTCTTTCAAATGGAGATGATTGTTCGAGCTACAAGAAAAGGCTATCACATTGAAGAGGTTCCAATAACCTTTGTTGATAGAGTGTTTGGAATTTCCAAGCTTGGAGGATCTGAAGTAGTAGAGTATTTGAAAGGTCTGTTGTACCTTTTGGTCACCACATGATACACAAAATAGTGAAAATTTATTGAGTTACAACCAGGTAAGCTTCTTGATTGATTTCTGGTTAGGTACCCACCACCTCCAGGCTTTTGATGTAAACTTGAGATGATATTTCCTAATTAGGGGTTTTCCCGCAATTTTCCTTACAAATCAAAACCACAACTGCGAGCTTATTTGGTTCATGCTAGGTATTGTATTCCATGTTTATTTAGGTATTGTACTCCATGTTTATTTTGTAGGATACCTCCTTTGTCTGGCGGGTTTTTCTTCCTTTCAACATTAACTTGTACTACATTTCATTTACATACATTCATTGAAACTAGAATTAGATCAAAGTCTAATTAGCTTTGATG ATGGCGGAGCAGGAGAAAGAGAGGAATAAGTACAGTTTAATTGTCCCAACCTACAACGAGCGCCTCAATATTGCTCTTCTTGTTTACCTCATTTTCAAGCACCTCCCGGATGTTGATTTTGAAGTAATTGTCGTTGATGATGGAAGTCCTGATGGTACTCAAGAAGTTGTGAAAGAGTTGCAAGGGGTATATGGTGAAGATCGCATTCTATTGAGAGCCAGACCTAGGAAGCTTGGCTTAGGAACGGCTTACTGTCACGGTCTCAAGCATGCAAGTGGTAATTTTGTTGTAATAATGGATGCTGATTTATCCCACCATCCCAAATATTTACCAAGCTTCATTCGGAAACAGTTACAAACGGGTGCTGATATAGTTACAGGCACCCGATATGTGAAAGGTGGCGGTGTGCATGGATGGAATCTTATGCGCAAACTAACAAGTAGAGGAGCTAATGTTCTTGCCCAAACACTTTTATGGCCTGGTGTATCAGATTTAACTGGATCTTTCCGGCTCTACAAGAAATCGGTGCTTGAAGATATCATTAGCTCAGTTGTTAGCAAGGGATATGTCTTTCAAATGGAGATGATTGTTCGAGCTACAAGAAAAGGCTATCACATTGAAGAGGTTCCAATAACCTTTGTTGATAGAGTGTTTGGAATTTCCAAGCTTGGAGGATCTGAAGTAGTAGAGTATTTGAAAGGTCTGTTGTACCTTTTGGTCACCACATGA MAEQEKERNKYSLIVPTYNERLNIALLVYLIFKHLPDVDFEVIVVDDGSPDGTQEVVKELQGVYGEDRILLRARPRKLGLGTAYCHGLKHASGNFVVIMDADLSHHPKYLPSFIRKQLQTGADIVTGTRYVKGGGVHGWNLMRKLTSRGANVLAQTLLWPGVSDLTGSFRLYKKSVLEDIISSVVSKGYVFQMEMIVRATRKGYHIEEVPITFVDRVFGISKLGGSEVVEYLKGLLYLLVTT Homology
BLAST of CmoCh01G020670 vs. ExPASy Swiss-Prot
Match: Q9LM93 (Dolichol-phosphate mannosyltransferase subunit 1 OS=Arabidopsis thaliana OX=3702 GN=DPMS1 PE=1 SV=1) HSP 1 Score: 428.7 bits (1101), Expect = 4.3e-119 Identity = 208/242 (85.95%), Postives = 229/242 (94.63%), Query Frame = 0
BLAST of CmoCh01G020670 vs. ExPASy Swiss-Prot
Match: O60762 (Dolichol-phosphate mannosyltransferase subunit 1 OS=Homo sapiens OX=9606 GN=DPM1 PE=1 SV=1) HSP 1 Score: 318.5 bits (815), Expect = 6.3e-86 Identity = 151/237 (63.71%), Postives = 193/237 (81.43%), Query Frame = 0
BLAST of CmoCh01G020670 vs. ExPASy Swiss-Prot
Match: Q9WU83 (Dolichol-phosphate mannosyltransferase subunit 1 OS=Cricetulus griseus OX=10029 GN=DPM1 PE=2 SV=1) HSP 1 Score: 317.4 bits (812), Expect = 1.4e-85 Identity = 151/241 (62.66%), Postives = 194/241 (80.50%), Query Frame = 0
BLAST of CmoCh01G020670 vs. ExPASy Swiss-Prot
Match: O70152 (Dolichol-phosphate mannosyltransferase subunit 1 OS=Mus musculus OX=10090 GN=Dpm1 PE=1 SV=1) HSP 1 Score: 315.1 bits (806), Expect = 7.0e-85 Identity = 150/241 (62.24%), Postives = 193/241 (80.08%), Query Frame = 0
BLAST of CmoCh01G020670 vs. ExPASy Swiss-Prot
Match: Q9VIU7 (Dolichol-phosphate mannosyltransferase subunit 1 OS=Drosophila melanogaster OX=7227 GN=Dpm1 PE=3 SV=1) HSP 1 Score: 313.2 bits (801), Expect = 2.7e-84 Identity = 148/236 (62.71%), Postives = 191/236 (80.93%), Query Frame = 0
BLAST of CmoCh01G020670 vs. ExPASy TrEMBL
Match: A0A6J1FKE5 (Dolichol-phosphate mannosyltransferase subunit 1 OS=Cucurbita moschata OX=3662 GN=LOC111446230 PE=3 SV=1) HSP 1 Score: 483.4 bits (1243), Expect = 5.5e-133 Identity = 242/242 (100.00%), Postives = 242/242 (100.00%), Query Frame = 0
BLAST of CmoCh01G020670 vs. ExPASy TrEMBL
Match: A0A6J1IWU5 (Dolichol-phosphate mannosyltransferase subunit 1 OS=Cucurbita maxima OX=3661 GN=LOC111481318 PE=3 SV=1) HSP 1 Score: 481.9 bits (1239), Expect = 1.6e-132 Identity = 240/242 (99.17%), Postives = 242/242 (100.00%), Query Frame = 0
BLAST of CmoCh01G020670 vs. ExPASy TrEMBL
Match: A0A5A7VE99 (Dolichol-phosphate mannosyltransferase subunit 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G00690 PE=3 SV=1) HSP 1 Score: 473.4 bits (1217), Expect = 5.7e-130 Identity = 234/242 (96.69%), Postives = 240/242 (99.17%), Query Frame = 0
BLAST of CmoCh01G020670 vs. ExPASy TrEMBL
Match: A0A1S3BV11 (Dolichol-phosphate mannosyltransferase subunit 1 OS=Cucumis melo OX=3656 GN=LOC103493807 PE=3 SV=1) HSP 1 Score: 473.4 bits (1217), Expect = 5.7e-130 Identity = 234/242 (96.69%), Postives = 240/242 (99.17%), Query Frame = 0
BLAST of CmoCh01G020670 vs. ExPASy TrEMBL
Match: A0A0A0L0P4 (Dolichol-phosphate mannosyltransferase subunit 1 OS=Cucumis sativus OX=3659 GN=Csa_4G658550 PE=3 SV=1) HSP 1 Score: 468.4 bits (1204), Expect = 1.8e-128 Identity = 230/242 (95.04%), Postives = 240/242 (99.17%), Query Frame = 0
BLAST of CmoCh01G020670 vs. NCBI nr
Match: XP_022940722.1 (dolichol-phosphate mannosyltransferase subunit 1 [Cucurbita moschata]) HSP 1 Score: 483.4 bits (1243), Expect = 1.1e-132 Identity = 242/242 (100.00%), Postives = 242/242 (100.00%), Query Frame = 0
BLAST of CmoCh01G020670 vs. NCBI nr
Match: XP_022982527.1 (dolichol-phosphate mannosyltransferase subunit 1 [Cucurbita maxima] >XP_023522417.1 dolichol-phosphate mannosyltransferase subunit 1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 481.9 bits (1239), Expect = 3.3e-132 Identity = 240/242 (99.17%), Postives = 242/242 (100.00%), Query Frame = 0
BLAST of CmoCh01G020670 vs. NCBI nr
Match: KAG7037946.1 (Dolichol-phosphate mannosyltransferase subunit 1 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 481.5 bits (1238), Expect = 4.3e-132 Identity = 240/242 (99.17%), Postives = 242/242 (100.00%), Query Frame = 0
BLAST of CmoCh01G020670 vs. NCBI nr
Match: XP_038896151.1 (dolichol-phosphate mannosyltransferase subunit 1 isoform X1 [Benincasa hispida]) HSP 1 Score: 474.2 bits (1219), Expect = 6.9e-130 Identity = 234/242 (96.69%), Postives = 240/242 (99.17%), Query Frame = 0
BLAST of CmoCh01G020670 vs. NCBI nr
Match: XP_008452949.1 (PREDICTED: dolichol-phosphate mannosyltransferase subunit 1 [Cucumis melo] >KAA0064636.1 dolichol-phosphate mannosyltransferase subunit 1 [Cucumis melo var. makuwa] >TYK19956.1 dolichol-phosphate mannosyltransferase subunit 1 [Cucumis melo var. makuwa]) HSP 1 Score: 473.4 bits (1217), Expect = 1.2e-129 Identity = 234/242 (96.69%), Postives = 240/242 (99.17%), Query Frame = 0
BLAST of CmoCh01G020670 vs. TAIR 10
Match: AT1G20575.1 (Nucleotide-diphospho-sugar transferases superfamily protein ) HSP 1 Score: 428.7 bits (1101), Expect = 3.1e-120 Identity = 208/242 (85.95%), Postives = 229/242 (94.63%), Query Frame = 0
BLAST of CmoCh01G020670 vs. TAIR 10
Match: AT2G39630.1 (Nucleotide-diphospho-sugar transferases superfamily protein ) HSP 1 Score: 68.6 bits (166), Expect = 8.1e-12 Identity = 59/246 (23.98%), Postives = 100/246 (40.65%), Query Frame = 0
BLAST of CmoCh01G020670 vs. TAIR 10
Match: AT2G39630.2 (Nucleotide-diphospho-sugar transferases superfamily protein ) HSP 1 Score: 58.9 bits (141), Expect = 6.4e-09 Identity = 35/98 (35.71%), Postives = 50/98 (51.02%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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