CmoCh01G020540 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh01G020540
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	high mobility group B protein 9-like
Location	Cmo_Chr01: 14346966 .. 14349144 (-)
RNA-Seq Expression	CmoCh01G020540
Synteny	CmoCh01G020540

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCAACGCCGGCGAGGACCAAGAGCTGGAATGGCGACGTGGATAAGCATTACCCACCGGCGCTGGCCACCCATGATGAAGTTATTTCTGACCCCATTGTGTTTTGGGACACTTTGAGGCGTTTTCATTTTGTGATGAACACCAAGTTCATGTGAGACACCTTTCTTCTTCTTCTACTATTTTTTTTTTCCCGACTTGGTAAATGAAGTAAAATGGTGCTGCACAGCCAAAAGACACCATTTCTTTACTCTTTTCCTTCCTCTAATTTCTAAGCATCAATCTTTTTCCAGTAAAAAATATGAAGAAATCGAAGTTTTTAACTTTTACTTTCCTTTCCTTGAATACTTAAAAGGATTCCTGTGATCGGAGGGAAGGAGCTAGACTTGCATGTTTTGTATTCAGAGGTTACAAGGAGGGGCGGCCATGAAAAGGTAAGGTTTGGCCCTTCGTCTTCCATTTTTCAACAACAAAGCTCTTGGTTTGAGAAAATGGAGTGATTTTGACTATGCAAGTTCCTATTTCATGGCGGTTTAGGTTGTTGCAGAGAAGAAATGGAGGGAAGTTGGAGGTATATTTAAGTTTTCTCCTACGACCACAAGTGCTTCGTTTGTATTGAGAAAACACTATCTAAGTCTTCTGTACCATTATGAGCAAGTTTACTTGTTCGGCCGGCAGGGCCCCATCTGTGCCCCTCAAGGTCCCTTTTTGTTCTCCCCTTCCATTTTTCCTTTTTTACTTTATCCGTTATTTTCCATATCGGATTTTGCTGTAAATCTGAGTTGGGTTTTGTCCTTTTCTTCTTCTACAGCGCCATTATCTTTTGGTAGCCCTACGAGGGATAGCGAATTGGCTATGGTGGAATATACTCCCAAGACAACGTCGTTTTCGCCTGCGGAAGGTGACAACCTTTCACATTCCTTGCTTTTCTTCGTGGGGTCAAGTAATAAAAGTAGAACAGTTGTTGCCACCAATGCCTTCTATTTAACTGATTCGATTCGATAAATTATTGGGAGGGAGGGACCGTAGAGCTGAGTGGCTACACCAAATAAATTCTCCCTACTATGTGTGTCTGCGTTGGTTTTTCATTCAGTTTTGTTCCATTCCTACTTCGCATCTCTTCATATTTGTGTTTTTTTTTAACCCAAGTGGTTGATGTTTTTCAGTTACTGGAACAATTGATGGGAAATTCGACTGTGGTTACCTAGTGACTGTGAAATTGGGATCCGAGGTTCTTAGAGGAGTACTTTACCATCCAGATCAGCCAGTCCCGTCTGATCTACGGCCTCAGTCTACAAATGCTATTATACCTTACACTGGTGGCAGACAGAGACACGCTGGTCGACGACACCGGAGACGCCGGAGAAAGACAGACCCTAACCACCCAAAACCGAACAGAAGTGGGTACAATTTCTTCTTTGCAGAGAAGCATTACAAGCTCAAATCTCTGTACCCAAACAGAGAGAGGGAGTTCACCAAGATGATTGGAGAGTCTTGGAACAAACTAAGTCCTGAAGAAAGGATGGTATGTCTGTCTAGCTTTTTACCAAAGTTCCAACAGTTCTTGACTTTTTGTGGGTTTGATCAAATGGTTGTCTCTGCTCCTATAGGTTTATCAAAACATTGGGCTGAAAGACAAGGAAAGATACAAGAGAGAGTTGAAAGAGTACAAGGAGAAAATGAGGCAGGCAACTGCTGATATTCAGGCAACTAACTGTTCAAAACATGGAGAGTAACAAAGAGGGAAGAGAATTCAGCAGTTTAGGTCTTTTTTTGGGTCTCTTGTCAAGTTATATGATATATAAACTTTGTATCATATCCTTCTAACTTTACATGGCAAATCATAGGTTCTTATATCCAAGTGCTTGGCCTCAAACTGCTGCTACACACTACAATGTCACTATTGGAACTCTCATACTATGCTGCTACACACTAGATTCTTAGAATTTTCAACTTTGAAATGACAGAGGAATGTGCCCTTTTTAACTTCGTTTTTGTTTCTTATTCCATCAGTGGTCATGATGAAGCCAACCAAATGAGCCTTAGAGAGAGGCTTCTTCTGTGTCATGTGCTACAATATTCGAATATTAACAAACATGGTTTAAAAGAAAGTAAACAAAGGCACAGAAGCAAATGAGTGAATGTTAGAAACAGTTGATCATATATGCACAAGAACGTTAG

mRNA sequence

ATGTCAACGCCGGCGAGGACCAAGAGCTGGAATGGCGACGTGGATAAGCATTACCCACCGGCGCTGGCCACCCATGATGAAGTTATTTCTGACCCCATTGTGTTTTGGGACACTTTGAGGCGTTTTCATTTTGTGATGAACACCAAGTTCATGATTCCTGTGATCGGAGGGAAGGAGCTAGACTTGCATGTTTTGTATTCAGAGGTTACAAGGAGGGGCGGCCATGAAAAGGTTGTTGCAGAGAAGAAATGGAGGGAAGTTGGAGGTATATTTAAGTTTTCTCCTACGACCACAAGTGCTTCGTTTGTATTGAGAAAACACTATCTAAGTCTTCTGTACCATTATGAGCAAGTTTACTTGTTCGGCCGGCAGGGCCCCATCTGTGCCCCTCAAGGTCCCTTTTTGTTCTCCCCTTCCATTTTTCCTTTTTTACTTTATCCGTTATTTTCCATATCGGATTTTGCTGTAAATCTGAGTTGGGTTTTGTCCTTTTCTTCTTCTACAGCGCCATTATCTTTTGGTAGCCCTACGAGGGATAGCGAATTGGCTATGGTGGAATATACTCCCAAGACAACGTCGTTTTCGCCTGCGGAAGGTGACAACCTTTCACATTCCTTGCTTTTCTTCGTGGGGTCAATTACTGGAACAATTGATGGGAAATTCGACTGTGGTTACCTAGTGACTGTGAAATTGGGATCCGAGGTTCTTAGAGGAGTACTTTACCATCCAGATCAGCCAGTCCCGTCTGATCTACGGCCTCAGTCTACAAATGCTATTATACCTTACACTGGTGGCAGACAGAGACACGCTGGTCGACGACACCGGAGACGCCGGAGAAAGACAGACCCTAACCACCCAAAACCGAACAGAAGTGGGTACAATTTCTTCTTTGCAGAGAAGCATTACAAGCTCAAATCTCTGTACCCAAACAGAGAGAGGGAGTTCACCAAGATGATTGGAGAGTCTTGGAACAAACTAAGTCCTGAAGAAAGGATGGTTTATCAAAACATTGGGCTGAAAGACAAGGAAAGATACAAGAGAGAGTTGAAAGAGTACAAGGAGAAAATGAGGCAGGCAACTGCTGATATTCAGGCAACTAACTGTTCAAAACATGGAGAGTAACAAAGAGGGAAGAGAATTCAGCAGTTTAGGTTCTTATATCCAAGTGCTTGGCCTCAAACTGCTGCTACACACTACAATGTCACTATTGGAACTCTCATACTATGCTGCTACACACTAGATTCTTAGAATTTTCAACTTTGAAATGACAGAGGAATGTGCCCTTTTTAACTTCGTTTTTGTTTCTTATTCCATCAGTGGTCATGATGAAGCCAACCAAATGAGCCTTAGAGAGAGGCTTCTTCTGTGTCATGTGCTACAATATTCGAATATTAACAAACATGGTTTAAAAGAAAGTAAACAAAGGCACAGAAGCAAATGAGTGAATGTTAGAAACAGTTGATCATATATGCACAAGAACGTTAG

Coding sequence (CDS)

ATGTCAACGCCGGCGAGGACCAAGAGCTGGAATGGCGACGTGGATAAGCATTACCCACCGGCGCTGGCCACCCATGATGAAGTTATTTCTGACCCCATTGTGTTTTGGGACACTTTGAGGCGTTTTCATTTTGTGATGAACACCAAGTTCATGATTCCTGTGATCGGAGGGAAGGAGCTAGACTTGCATGTTTTGTATTCAGAGGTTACAAGGAGGGGCGGCCATGAAAAGGTTGTTGCAGAGAAGAAATGGAGGGAAGTTGGAGGTATATTTAAGTTTTCTCCTACGACCACAAGTGCTTCGTTTGTATTGAGAAAACACTATCTAAGTCTTCTGTACCATTATGAGCAAGTTTACTTGTTCGGCCGGCAGGGCCCCATCTGTGCCCCTCAAGGTCCCTTTTTGTTCTCCCCTTCCATTTTTCCTTTTTTACTTTATCCGTTATTTTCCATATCGGATTTTGCTGTAAATCTGAGTTGGGTTTTGTCCTTTTCTTCTTCTACAGCGCCATTATCTTTTGGTAGCCCTACGAGGGATAGCGAATTGGCTATGGTGGAATATACTCCCAAGACAACGTCGTTTTCGCCTGCGGAAGGTGACAACCTTTCACATTCCTTGCTTTTCTTCGTGGGGTCAATTACTGGAACAATTGATGGGAAATTCGACTGTGGTTACCTAGTGACTGTGAAATTGGGATCCGAGGTTCTTAGAGGAGTACTTTACCATCCAGATCAGCCAGTCCCGTCTGATCTACGGCCTCAGTCTACAAATGCTATTATACCTTACACTGGTGGCAGACAGAGACACGCTGGTCGACGACACCGGAGACGCCGGAGAAAGACAGACCCTAACCACCCAAAACCGAACAGAAGTGGGTACAATTTCTTCTTTGCAGAGAAGCATTACAAGCTCAAATCTCTGTACCCAAACAGAGAGAGGGAGTTCACCAAGATGATTGGAGAGTCTTGGAACAAACTAAGTCCTGAAGAAAGGATGGTTTATCAAAACATTGGGCTGAAAGACAAGGAAAGATACAAGAGAGAGTTGAAAGAGTACAAGGAGAAAATGAGGCAGGCAACTGCTGATATTCAGGCAACTAACTGTTCAAAACATGGAGAGTAA

Protein sequence

MSTPARTKSWNGDVDKHYPPALATHDEVISDPIVFWDTLRRFHFVMNTKFMIPVIGGKELDLHVLYSEVTRRGGHEKVVAEKKWREVGGIFKFSPTTTSASFVLRKHYLSLLYHYEQVYLFGRQGPICAPQGPFLFSPSIFPFLLYPLFSISDFAVNLSWVLSFSSSTAPLSFGSPTRDSELAMVEYTPKTTSFSPAEGDNLSHSLLFFVGSITGTIDGKFDCGYLVTVKLGSEVLRGVLYHPDQPVPSDLRPQSTNAIIPYTGGRQRHAGRRHRRRRRKTDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNKLSPEERMVYQNIGLKDKERYKRELKEYKEKMRQATADIQATNCSKHGE

Homology

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BLAST of CmoCh01G020540 vs. ExPASy Swiss-Prot
Match: Q9SGS2 (High mobility group B protein 9 OS=Arabidopsis thaliana OX=3702 GN=HMGB9 PE=1 SV=1)

HSP 1 Score: 382.5 bits (981), Expect = 5.5e-105
Identity = 209/356 (58.71%), Postives = 249/356 (69.94%), Query Frame = 0


Query: 16  KHYPPALATHDEVISDPIVFWDTLRRFHFVMNTKFMIPVIGGKELDLHVLYSEVTRRGGH 75
           K YP  LA H+ V+ D  VFWDTLRRFH +M+TKFMIPVIGGKELDLHVLY EVTRRGG+
Sbjct: 25  KEYPEPLALHEVVVKDSSVFWDTLRRFHSIMSTKFMIPVIGGKELDLHVLYVEVTRRGGY 84

Query: 76  EKVVAEKKWREVGGIFKFSPTTTSASFVLRKHYLSLLYHYEQVYLFGRQGPICAPQGPFL 135
           EKVV EKKWREVGG+F+FS TTTSASFVLRKHYL+LL+HYEQV+LF  +GP         
Sbjct: 85  EKVVVEKKWREVGGVFRFSATTTSASFVLRKHYLNLLFHYEQVHLFTARGP--------- 144

Query: 136 FSPSIFPFLLYPLFSISDFAVNLSWVLSFSSSTAPLSFGSPTRDSELAMVEYTPKTTSF- 195
                   LL+P   I+ F  N                  P+   E+A+VEYTP +  + 
Sbjct: 145 --------LLHP---IATFHAN------------------PSTSKEMALVEYTPPSIRYH 204

Query: 196 ---SPAEGDNLSHSLLFFVGSITGTIDGKFDCGYLVTVKLGSEVLRGVLYHPDQPVPSDL 255
               P++G +   ++        GTI+GKFDCGYLV VKLGSE+L GVLYH  QP PS  
Sbjct: 205 NTHPPSQGSSSFTAI--------GTIEGKFDCGYLVKVKLGSEILNGVLYHSAQPGPSS- 264

Query: 256 RPQS--TNAIIPY--TGGRQRHAGRRHRRRRRKTDPNHPKPNRSGYNFFFAEKHYKLKSL 315
            P +   NA++PY  TG R+R  G+R RR RR+ DPN+PKPNRSGYNFFFAEKH KLKSL
Sbjct: 265 SPTAVLNNAVVPYVETGRRRRRLGKR-RRSRRREDPNYPKPNRSGYNFFFAEKHCKLKSL 324

Query: 316 YPNREREFTKMIGESWNKLSPEERMVYQNIGLKDKERYKRELKEYKEKMRQATADI 364
           YPN+EREFTK+IGESW+ LS EERMVYQ+IGLKDKERY+REL EY+E +R    D+
Sbjct: 325 YPNKEREFTKLIGESWSNLSTEERMVYQDIGLKDKERYQRELNEYRETLRLRDGDM 332

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BLAST of CmoCh01G020540 vs. ExPASy Swiss-Prot
Match: Q9MAT6 (High mobility group B protein 15 OS=Arabidopsis thaliana OX=3702 GN=HMGB15 PE=2 SV=1)

HSP 1 Score: 252.3 bits (643), Expect = 8.6e-66
Identity = 143/349 (40.97%), Postives = 210/349 (60.17%), Query Frame = 0


Query: 23  ATHDEVISDPIVFWDTLRRFHFVMNTKFMIPVIGGKELDLHVLYSEVTRRGGHEKVVAEK 82
           AT++ V++DP +F  +L R H ++ TKFM+P+IGG++LDLH L+ EVT RGG  K++ E+
Sbjct: 23  ATYEAVVADPRLFMTSLERLHSLLGTKFMVPIIGGRDLDLHKLFVEVTSRGGINKILNER 82

Query: 83  KWREVGGIFKFSPTTTSASFVLRKHYLSLLYHYEQVYLFGRQGPICAPQGPFLFSPSIFP 142
           +W+EV   F F PT T+AS+VLRK+Y SLL +YEQ+Y F   G I  P    + SPS  P
Sbjct: 83  RWKEVTATFVFPPTATNASYVLRKYYFSLLNNYEQIYFFRSNGQI-PPDS--MQSPSARP 142

Query: 143 FLLYPLFSISDFAVNLSWVLSFSSSTAPLSFGSPTRDSELAMVEYTPKTTSFSPAE--GD 202
             +                            G+     EL  + +TP+    + AE  G 
Sbjct: 143 CFIQ---------------------------GAIRPSQELQALTFTPQ-PKINTAEFLGG 202

Query: 203 NLSHSLLFFVGSITGTIDGKFDCGYLVTVKLGSEVLRGVLYH-PDQPVPSDLRPQSTNAI 262
           +L+ S      ++ G IDGKF+ GYLVTV +GSE L+GVLY    Q   S   PQ ++ +
Sbjct: 203 SLAGS------NVVGVIDGKFESGYLVTVTIGSEQLKGVLYQLLPQNTVSYQTPQQSHGV 262

Query: 263 IPYT-----------GGRQRHAGRRHRRRRRKTDPNHPKPNRSGYNFFFAEKHYKLKSLY 322
           +P T           GG  +   RR +   ++ DP+HPKPNRSGYNFFFAE+H +LK L+
Sbjct: 263 LPNTLNISANPQGVAGGVTKRRRRRKKSEIKRRDPDHPKPNRSGYNFFFAEQHARLKPLH 322

Query: 323 PNREREFTKMIGESWNKLSPEERMVYQNIGLKDKERYKRELKEYKEKMR 358
           P ++R+ ++MIGE WNKL+ +E+++YQ   ++DKERY+ E+++Y+EK +
Sbjct: 323 PGKDRDISRMIGELWNKLNEDEKLIYQGKAMEDKERYRTEMEDYREKKK 334

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BLAST of CmoCh01G020540 vs. ExPASy Swiss-Prot
Match: Q9LTT3 (High mobility group B protein 10 OS=Arabidopsis thaliana OX=3702 GN=HMGB10 PE=1 SV=1)

HSP 1 Score: 195.3 bits (495), Expect = 1.2e-48
Identity = 125/335 (37.31%), Postives = 177/335 (52.84%), Query Frame = 0


Query: 23  ATHDEVISDPIVFWDTLRRFHFVMNTKFMIPVIGGKELDLHVLYSEVTRRGGHEKVVAEK 82
           A +D+++ +  +FW+ LR F  + +    +P +GG  LDLH L+ EVT RGG E+VV ++
Sbjct: 34  AKYDDLVRNSALFWEKLRAFLGLTSKTLKVPTVGGNTLDLHRLFIEVTSRGGIERVVKDR 93

Query: 83  KWREVGGIFKFSPTTTSASFVLRKHYLSLLYHYEQVYLFGRQGPICAPQGPFLFSPSIFP 142
           KW+EV G F F  T TSASFVLRK+YL  L+  E VY   +                   
Sbjct: 94  KWKEVIGAFSFPTTITSASFVLRKYYLKFLFQLEHVYYLEK------------------- 153

Query: 143 FLLYPLFSISDFAVNLSWVLSFSSSTAPLSFGSPTRDSELAMVEYTPKTTSFSPAEGDNL 202
                                      P+S    T ++  ++   +P     +P EG + 
Sbjct: 154 ---------------------------PVSSLQSTDEALKSLANESP-----NPEEGIDE 213

Query: 203 SHSLLFFVG-SITGTIDGKFDCGYLVTVKLGSEVLRGVLYH-PDQPVPSDLRPQSTNAII 262
                  VG  + G IDGKFD GYLVT+KLGS+ L+GVLYH P  P  S    ++ +AI+
Sbjct: 214 PQ-----VGYEVQGFIDGKFDSGYLVTMKLGSQELKGVLYHIPQTPSQSQQTMETPSAIV 273

Query: 263 PYTGGRQRHAGRRHRRRRR--KTDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKM 322
                  + + RRHR++ +    D   PK +RSGYNFFFAE++ +LK  Y  +ER  TK 
Sbjct: 274 -------QSSQRRHRKKSKLAVVDTQKPKCHRSGYNFFFAEQYARLKPEYHGQERSITKK 305

Query: 323 IGESWNKLSPEERMVYQNIGLKDKERYKRELKEYK 354
           IG  W+ L+  E+ VYQ+ G+KD ERY+ E+ EYK
Sbjct: 334 IGHMWSNLTESEKQVYQDKGVKDVERYRIEMLEYK 305

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BLAST of CmoCh01G020540 vs. ExPASy Swiss-Prot
Match: Q9LG02 (Putative high mobility group B protein 11 OS=Arabidopsis thaliana OX=3702 GN=HMGB11 PE=1 SV=2)

HSP 1 Score: 162.5 bits (410), Expect = 8.9e-39
Identity = 115/362 (31.77%), Postives = 169/362 (46.69%), Query Frame = 0


Query: 4   PARTKSWNGDVDKHYPPALATHDEVISDPIVFWDTLRRFHFVMNTKFMIPVIGGKELDLH 63
           PA   + + DV  H       + +++ +P +FW+ LR FH   + KF IP++GGK LDLH
Sbjct: 12  PANASALDNDVSSHMS---MLYQDIVRNPELFWEMLRDFHESSDKKFKIPIVGGKSLDLH 71

Query: 64  VLYSEVTRRGGHEKVVAEKKWREVGGIFKFSPTTTSASFVLRKHYLSLLYHYEQVYLFGR 123
            L++EVT RGG EKV+ +++ +EV   F F  T T+++FVLRK YL +L+ +E +Y F  
Sbjct: 72  RLFNEVTSRGGLEKVIKDRRCKEVIDAFNFKTTITNSAFVLRKSYLKMLFEFEHLYYF-- 131

Query: 124 QGPICAPQGPFLFSPSIFPFLLYPLFSISDFAVNLSWVLSFSSSTAPLSFGSPTRDSELA 183
           Q P+                     F   + A+ L            L   S  RD +  
Sbjct: 132 QAPLST-------------------FWEKEKALKL------------LIEKSANRDKD-- 191

Query: 184 MVEYTPKTTSFSPAEGDNLSHSLLFFVGSITGTIDGKFDCGYLVTVKLGSEVLRGVLYHP 243
             E  P T                     ITG IDGKF+ GYL++ K+GSE L+G+LYH 
Sbjct: 192 SQELKPGTV--------------------ITGIIDGKFESGYLISTKVGSEKLKGMLYH- 251

Query: 244 DQPVPSDLRPQSTNAIIPYTGGRQRHAGRRHRRRRRKTDPNHPKPNRSGYNFFFAEKHYK 303
                          I P T       G++  +  +      PK  R+GYNFF AE+  +
Sbjct: 252 ---------------ISPET-----KRGKKKAKSSQGDSHKPPKRQRTGYNFFVAEQSVR 294

Query: 304 LKSLYPNREREFTKMIGESWNKLSPEERMVYQNIGLKDKERYKRELKEYKEKMRQATADI 363
           +K+    ++    K  G  W  LS  +R VY     +D +RYK E+ +Y+  M    A+I
Sbjct: 312 IKAENAGQKVSSPKNFGNMWTNLSESDRKVYYEKSREDGKRYKMEILQYRSLMESRVAEI 294

Query: 364 QA 366
            A
Sbjct: 372 VA 294

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BLAST of CmoCh01G020540 vs. ExPASy Swiss-Prot
Match: Q68CP9 (AT-rich interactive domain-containing protein 2 OS=Homo sapiens OX=9606 GN=ARID2 PE=1 SV=2)

HSP 1 Score: 80.5 bits (197), Expect = 4.5e-14
Identity = 55/155 (35.48%), Postives = 81/155 (52.26%), Query Frame = 0


Query: 33  IVFWDTLRRFHFVMNTKF-MIPVIGGKELDLHVLYSEVTRRGGHEKVVAEKKWREVGGIF 92
           + F D LR+FH    + F  IP +GGKELDLH LY+ VT  GG  KV  + +W E+   F
Sbjct: 17  LAFLDELRQFHHSRGSPFKKIPAVGGKELDLHGLYTRVTTLGGFAKVSEKNQWGEIVEEF 76

Query: 93  KFSPTTTSASFVLRKHYLSLLYHYEQVYLFGRQGPICAPQGPFLFSP--SIFPFLLYPLF 152
            F  + ++A+F L+++YL  L  YE+V+ FG       P  P    P  +I     Y   
Sbjct: 77  NFPRSCSNAAFALKQYYLRYLEKYEKVHHFGEDDDEVPPGNPKPQLPIGAIPSSYNYQQH 136

Query: 153 SISDFAVNLSWVLSFSSSTAPLSFGSPTRDSELAM 185
           S+SD+ +  S+ LS       + F SP   ++L +
Sbjct: 137 SVSDY-LRQSYGLS-------MDFNSPNDYNKLVL 163

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BLAST of CmoCh01G020540 vs. ExPASy TrEMBL
Match: A0A6J1FKI9 (high mobility group B protein 9-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111446267 PE=4 SV=1)

HSP 1 Score: 724.9 bits (1870), Expect = 1.7e-205
Identity = 358/373 (95.98%), Postives = 359/373 (96.25%), Query Frame = 0


Query: 1   MSTPARTKSWNGDVDKHYPPALATHDEVISDPIVFWDTLRRFHFVMNTKFMIPVIGGKEL 60
           MSTPARTKSWNGDVDKHYPPALATHDEVISDPIVFWDTLRRFHFVMNTKFMIPVIGGKEL
Sbjct: 1   MSTPARTKSWNGDVDKHYPPALATHDEVISDPIVFWDTLRRFHFVMNTKFMIPVIGGKEL 60

Query: 61  DLHVLYSEVTRRGGHEKVVAEKKWREVGGIFKFSPTTTSASFVLRKHYLSLLYHYEQVYL 120
           DLHVLYSEVTRRGGHEKVVAEKKWREVGGIFKFSPTTTSASFVLRKHYLSLLYHYEQVYL
Sbjct: 61  DLHVLYSEVTRRGGHEKVVAEKKWREVGGIFKFSPTTTSASFVLRKHYLSLLYHYEQVYL 120

Query: 121 FGRQGPICAPQGPFLFSPSIFPFLLYPLFSISDFAVNLSWVLSFSSSTAPLSFGSPTRDS 180
           FGRQGPICAPQGPFLFSPSIFPFLLYPLFSISDFAVNLSWVLSFSSSTAPLSFGSPTRDS
Sbjct: 121 FGRQGPICAPQGPFLFSPSIFPFLLYPLFSISDFAVNLSWVLSFSSSTAPLSFGSPTRDS 180

Query: 181 ELAMVEYTPKTTSFSPAEGDNLSHSLLFFVGSITGTIDGKFDCGYLVTVKLGSEVLRGVL 240
           ELAMVEYTPKTTSFSPAE              +TGTIDGKFDCGYLVTVKLGSEVLRGVL
Sbjct: 181 ELAMVEYTPKTTSFSPAE--------------VTGTIDGKFDCGYLVTVKLGSEVLRGVL 240

Query: 241 YHPDQPVPSDLRPQSTNAIIPYTGGRQRHAGRRHRRRRRKTDPNHPKPNRSGYNFFFAEK 300
           YHPDQPVPSDLRPQSTNAIIPYTGGRQRHAGRRHRRRRRKTDPNHPKPNRSGYNFFFAEK
Sbjct: 241 YHPDQPVPSDLRPQSTNAIIPYTGGRQRHAGRRHRRRRRKTDPNHPKPNRSGYNFFFAEK 300

Query: 301 HYKLKSLYPNREREFTKMIGESWNKLSPEERMVYQNIGLKDKERYKRELKEYKEKMRQAT 360
           HYKLKSLYPNREREFTKMIGESWNKLSPEERMVYQNIGLKDKERYKRELKEYKEKMRQAT
Sbjct: 301 HYKLKSLYPNREREFTKMIGESWNKLSPEERMVYQNIGLKDKERYKRELKEYKEKMRQAT 359

Query: 361 ADIQATNCSKHGE 374
           ADIQATNCSKHGE
Sbjct: 361 ADIQATNCSKHGE 359

[Close]

BLAST of CmoCh01G020540 vs. ExPASy TrEMBL
Match: A0A6J1FQ88 (high mobility group B protein 9-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111446267 PE=4 SV=1)

HSP 1 Score: 636.3 bits (1640), Expect = 7.8e-179
Identity = 321/373 (86.06%), Postives = 322/373 (86.33%), Query Frame = 0


Query: 1   MSTPARTKSWNGDVDKHYPPALATHDEVISDPIVFWDTLRRFHFVMNTKFMIPVIGGKEL 60
           MSTPARTKSWNGDVDKHYPPALATHDEVISDPIVFWDTLRRFHFVMNTKFMIPVIGGKEL
Sbjct: 1   MSTPARTKSWNGDVDKHYPPALATHDEVISDPIVFWDTLRRFHFVMNTKFMIPVIGGKEL 60

Query: 61  DLHVLYSEVTRRGGHEKVVAEKKWREVGGIFKFSPTTTSASFVLRKHYLSLLYHYEQVYL 120
           DLHVLYSEVTRRGGHEKVVAEKKWREVGGIFKFSPTTTSASFVLRKHYLSLLYHYEQVYL
Sbjct: 61  DLHVLYSEVTRRGGHEKVVAEKKWREVGGIFKFSPTTTSASFVLRKHYLSLLYHYEQVYL 120

Query: 121 FGRQGPICAPQGPFLFSPSIFPFLLYPLFSISDFAVNLSWVLSFSSSTAPLSFGSPTRDS 180
           FGRQGPICAPQ                                     APLSFGSPTRDS
Sbjct: 121 FGRQGPICAPQ-------------------------------------APLSFGSPTRDS 180

Query: 181 ELAMVEYTPKTTSFSPAEGDNLSHSLLFFVGSITGTIDGKFDCGYLVTVKLGSEVLRGVL 240
           ELAMVEYTPKTTSFSPAE              +TGTIDGKFDCGYLVTVKLGSEVLRGVL
Sbjct: 181 ELAMVEYTPKTTSFSPAE--------------VTGTIDGKFDCGYLVTVKLGSEVLRGVL 240

Query: 241 YHPDQPVPSDLRPQSTNAIIPYTGGRQRHAGRRHRRRRRKTDPNHPKPNRSGYNFFFAEK 300
           YHPDQPVPSDLRPQSTNAIIPYTGGRQRHAGRRHRRRRRKTDPNHPKPNRSGYNFFFAEK
Sbjct: 241 YHPDQPVPSDLRPQSTNAIIPYTGGRQRHAGRRHRRRRRKTDPNHPKPNRSGYNFFFAEK 300

Query: 301 HYKLKSLYPNREREFTKMIGESWNKLSPEERMVYQNIGLKDKERYKRELKEYKEKMRQAT 360
           HYKLKSLYPNREREFTKMIGESWNKLSPEERMVYQNIGLKDKERYKRELKEYKEKMRQAT
Sbjct: 301 HYKLKSLYPNREREFTKMIGESWNKLSPEERMVYQNIGLKDKERYKRELKEYKEKMRQAT 322

Query: 361 ADIQATNCSKHGE 374
           ADIQATNCSKHGE
Sbjct: 361 ADIQATNCSKHGE 322

[Close]

BLAST of CmoCh01G020540 vs. ExPASy TrEMBL
Match: A0A6J1IY83 (high mobility group B protein 9-like OS=Cucurbita maxima OX=3661 GN=LOC111481010 PE=4 SV=1)

HSP 1 Score: 621.7 bits (1602), Expect = 2.0e-174
Identity = 315/373 (84.45%), Postives = 318/373 (85.25%), Query Frame = 0


Query: 1   MSTPARTKSWNGDVDKHYPPALATHDEVISDPIVFWDTLRRFHFVMNTKFMIPVIGGKEL 60
           MSTPARTKSWNG VDKHYPPALA+HDEVISDPIVFWDTLRRFHFVMNTKFMIPVIGGKEL
Sbjct: 1   MSTPARTKSWNGGVDKHYPPALASHDEVISDPIVFWDTLRRFHFVMNTKFMIPVIGGKEL 60

Query: 61  DLHVLYSEVTRRGGHEKVVAEKKWREVGGIFKFSPTTTSASFVLRKHYLSLLYHYEQVYL 120
           DLHVLYSEVTRRGGHEKVVAEKKWREVGGIFKFSPTTTSASFVLRKHYLSLLYHYEQVYL
Sbjct: 61  DLHVLYSEVTRRGGHEKVVAEKKWREVGGIFKFSPTTTSASFVLRKHYLSLLYHYEQVYL 120

Query: 121 FGRQGPICAPQGPFLFSPSIFPFLLYPLFSISDFAVNLSWVLSFSSSTAPLSFGSPTRDS 180
           FGRQGPICAPQ                                     APLSFGSPTRDS
Sbjct: 121 FGRQGPICAPQ-------------------------------------APLSFGSPTRDS 180

Query: 181 ELAMVEYTPKTTSFSPAEGDNLSHSLLFFVGSITGTIDGKFDCGYLVTVKLGSEVLRGVL 240
           ELAMVEYTPKTTSFSPAE              +TGTIDGKFDCGYLVTVKLGSEVLRGVL
Sbjct: 181 ELAMVEYTPKTTSFSPAE--------------VTGTIDGKFDCGYLVTVKLGSEVLRGVL 240

Query: 241 YHPDQPVPSDLRPQSTNAIIPYTGGRQRHAGRRHRRRRRKTDPNHPKPNRSGYNFFFAEK 300
           YHPDQPVPS+LRPQSTNAIIPYTGGRQRHAGRRHRRRRRK DPNHPKPNRSGYNFFFAEK
Sbjct: 241 YHPDQPVPSNLRPQSTNAIIPYTGGRQRHAGRRHRRRRRKADPNHPKPNRSGYNFFFAEK 300

Query: 301 HYKLKSLYPNREREFTKMIGESWNKLSPEERMVYQNIGLKDKERYKRELKEYKEKMRQAT 360
           HYKLKSLYPNREREFTKMIGESWNKLSPEERMVYQNIGLKDKERYKRELKEYKEKMRQAT
Sbjct: 301 HYKLKSLYPNREREFTKMIGESWNKLSPEERMVYQNIGLKDKERYKRELKEYKEKMRQAT 322

Query: 361 ADIQATNCSKHGE 374
           ADIQAT  SKHGE
Sbjct: 361 ADIQATKYSKHGE 322

[Close]

BLAST of CmoCh01G020540 vs. ExPASy TrEMBL
Match: A0A5A7VAK3 (High mobility group B protein 9 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold255G003410 PE=4 SV=1)

HSP 1 Score: 572.0 bits (1473), Expect = 1.8e-159
Identity = 286/373 (76.68%), Postives = 300/373 (80.43%), Query Frame = 0


Query: 1   MSTPARTKSWNGDVDKHYPPALATHDEVISDPIVFWDTLRRFHFVMNTKFMIPVIGGKEL 60
           MS PARTK+WNG +DKHYPP LATHDEVISDPIVFWDTLRRFHF+MNTKFMIPVIGGKEL
Sbjct: 1   MSPPARTKTWNGGLDKHYPPPLATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKEL 60

Query: 61  DLHVLYSEVTRRGGHEKVVAEKKWREVGGIFKFSPTTTSASFVLRKHYLSLLYHYEQVYL 120
           DLHVLYSEVTRRGGHEKVVAEKKWREVG +FKFSPTTTSASFVLRKHYLSLLYHYEQVYL
Sbjct: 61  DLHVLYSEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSASFVLRKHYLSLLYHYEQVYL 120

Query: 121 FGRQGPICAPQGPFLFSPSIFPFLLYPLFSISDFAVNLSWVLSFSSSTAPLSFGSPTRDS 180
           FGRQGPIC PQ PF                                     SFGSPT ++
Sbjct: 121 FGRQGPICVPQAPF-------------------------------------SFGSPTSEN 180

Query: 181 ELAMVEYTPKTTSFSPAEGDNLSHSLLFFVGSITGTIDGKFDCGYLVTVKLGSEVLRGVL 240
           ELA+VEYTPKTTSFSP                +TGTIDGKFDCGYLVTVKLGSEVLRGVL
Sbjct: 181 ELALVEYTPKTTSFSPGP-----------PSEVTGTIDGKFDCGYLVTVKLGSEVLRGVL 240

Query: 241 YHPDQPVPSDLRPQSTNAIIPYTGGRQRHAGRRHRRRRRKTDPNHPKPNRSGYNFFFAEK 300
           YHP+QP PSDLRP STNAI+PYTGGR RH+GRRHRR RRK DPNHPKPNRSGYNFFFAEK
Sbjct: 241 YHPEQPPPSDLRPLSTNAIVPYTGGRHRHSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEK 300

Query: 301 HYKLKSLYPNREREFTKMIGESWNKLSPEERMVYQNIGLKDKERYKRELKEYKEKMRQAT 360
           HYKLKSLYPNREREFTKMIGESWN LSPEERMVYQNIGLKDKERY+RELKEYKEKMR  T
Sbjct: 301 HYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERYRRELKEYKEKMRMGT 324

Query: 361 ADIQATNCSKHGE 374
            D+   N SKHG+
Sbjct: 361 -DVDGANYSKHGD 324

[Close]

BLAST of CmoCh01G020540 vs. ExPASy TrEMBL
Match: E5GCD0 (High mobility group family OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 572.0 bits (1473), Expect = 1.8e-159
Identity = 286/373 (76.68%), Postives = 300/373 (80.43%), Query Frame = 0


Query: 1   MSTPARTKSWNGDVDKHYPPALATHDEVISDPIVFWDTLRRFHFVMNTKFMIPVIGGKEL 60
           MS PARTK+WNG +DKHYPP LATHDEVISDPIVFWDTLRRFHF+MNTKFMIPVIGGKEL
Sbjct: 1   MSPPARTKTWNGGLDKHYPPPLATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKEL 60

Query: 61  DLHVLYSEVTRRGGHEKVVAEKKWREVGGIFKFSPTTTSASFVLRKHYLSLLYHYEQVYL 120
           DLHVLYSEVTRRGGHEKVVAEKKWREVG +FKFSPTTTSASFVLRKHYLSLLYHYEQVYL
Sbjct: 61  DLHVLYSEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSASFVLRKHYLSLLYHYEQVYL 120

Query: 121 FGRQGPICAPQGPFLFSPSIFPFLLYPLFSISDFAVNLSWVLSFSSSTAPLSFGSPTRDS 180
           FGRQGPIC PQ PF                                     SFGSPT ++
Sbjct: 121 FGRQGPICVPQAPF-------------------------------------SFGSPTSEN 180

Query: 181 ELAMVEYTPKTTSFSPAEGDNLSHSLLFFVGSITGTIDGKFDCGYLVTVKLGSEVLRGVL 240
           ELA+VEYTPKTTSFSP                +TGTIDGKFDCGYLVTVKLGSEVLRGVL
Sbjct: 181 ELALVEYTPKTTSFSPGP-----------PSEVTGTIDGKFDCGYLVTVKLGSEVLRGVL 240

Query: 241 YHPDQPVPSDLRPQSTNAIIPYTGGRQRHAGRRHRRRRRKTDPNHPKPNRSGYNFFFAEK 300
           YHP+QP PSDLRP STNAI+PYTGGR RH+GRRHRR RRK DPNHPKPNRSGYNFFFAEK
Sbjct: 241 YHPEQPPPSDLRPLSTNAIVPYTGGRHRHSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEK 300

Query: 301 HYKLKSLYPNREREFTKMIGESWNKLSPEERMVYQNIGLKDKERYKRELKEYKEKMRQAT 360
           HYKLKSLYPNREREFTKMIGESWN LSPEERMVYQNIGLKDKERY+RELKEYKEKMR  T
Sbjct: 301 HYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERYRRELKEYKEKMRMGT 324

Query: 361 ADIQATNCSKHGE 374
            D+   N SKHG+
Sbjct: 361 -DVDGANYSKHGD 324

[Close]

BLAST of CmoCh01G020540 vs. NCBI nr
Match: XP_022940771.1 (high mobility group B protein 9-like isoform X1 [Cucurbita moschata] >XP_022940772.1 high mobility group B protein 9-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 724.9 bits (1870), Expect = 3.4e-205
Identity = 358/373 (95.98%), Postives = 359/373 (96.25%), Query Frame = 0


Query: 1   MSTPARTKSWNGDVDKHYPPALATHDEVISDPIVFWDTLRRFHFVMNTKFMIPVIGGKEL 60
           MSTPARTKSWNGDVDKHYPPALATHDEVISDPIVFWDTLRRFHFVMNTKFMIPVIGGKEL
Sbjct: 1   MSTPARTKSWNGDVDKHYPPALATHDEVISDPIVFWDTLRRFHFVMNTKFMIPVIGGKEL 60

Query: 61  DLHVLYSEVTRRGGHEKVVAEKKWREVGGIFKFSPTTTSASFVLRKHYLSLLYHYEQVYL 120
           DLHVLYSEVTRRGGHEKVVAEKKWREVGGIFKFSPTTTSASFVLRKHYLSLLYHYEQVYL
Sbjct: 61  DLHVLYSEVTRRGGHEKVVAEKKWREVGGIFKFSPTTTSASFVLRKHYLSLLYHYEQVYL 120

Query: 121 FGRQGPICAPQGPFLFSPSIFPFLLYPLFSISDFAVNLSWVLSFSSSTAPLSFGSPTRDS 180
           FGRQGPICAPQGPFLFSPSIFPFLLYPLFSISDFAVNLSWVLSFSSSTAPLSFGSPTRDS
Sbjct: 121 FGRQGPICAPQGPFLFSPSIFPFLLYPLFSISDFAVNLSWVLSFSSSTAPLSFGSPTRDS 180

Query: 181 ELAMVEYTPKTTSFSPAEGDNLSHSLLFFVGSITGTIDGKFDCGYLVTVKLGSEVLRGVL 240
           ELAMVEYTPKTTSFSPAE              +TGTIDGKFDCGYLVTVKLGSEVLRGVL
Sbjct: 181 ELAMVEYTPKTTSFSPAE--------------VTGTIDGKFDCGYLVTVKLGSEVLRGVL 240

Query: 241 YHPDQPVPSDLRPQSTNAIIPYTGGRQRHAGRRHRRRRRKTDPNHPKPNRSGYNFFFAEK 300
           YHPDQPVPSDLRPQSTNAIIPYTGGRQRHAGRRHRRRRRKTDPNHPKPNRSGYNFFFAEK
Sbjct: 241 YHPDQPVPSDLRPQSTNAIIPYTGGRQRHAGRRHRRRRRKTDPNHPKPNRSGYNFFFAEK 300

Query: 301 HYKLKSLYPNREREFTKMIGESWNKLSPEERMVYQNIGLKDKERYKRELKEYKEKMRQAT 360
           HYKLKSLYPNREREFTKMIGESWNKLSPEERMVYQNIGLKDKERYKRELKEYKEKMRQAT
Sbjct: 301 HYKLKSLYPNREREFTKMIGESWNKLSPEERMVYQNIGLKDKERYKRELKEYKEKMRQAT 359

Query: 361 ADIQATNCSKHGE 374
           ADIQATNCSKHGE
Sbjct: 361 ADIQATNCSKHGE 359

[Close]

BLAST of CmoCh01G020540 vs. NCBI nr
Match: XP_023525870.1 (high mobility group B protein 9-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023525871.1 high mobility group B protein 9-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 716.5 bits (1848), Expect = 1.2e-202
Identity = 354/373 (94.91%), Postives = 356/373 (95.44%), Query Frame = 0


Query: 1   MSTPARTKSWNGDVDKHYPPALATHDEVISDPIVFWDTLRRFHFVMNTKFMIPVIGGKEL 60
           MSTPARTKSWNG+VDKHYPPALATHDEVISDPIVFWDTLRRFHFVMNTKFMIPVIGGKEL
Sbjct: 1   MSTPARTKSWNGNVDKHYPPALATHDEVISDPIVFWDTLRRFHFVMNTKFMIPVIGGKEL 60

Query: 61  DLHVLYSEVTRRGGHEKVVAEKKWREVGGIFKFSPTTTSASFVLRKHYLSLLYHYEQVYL 120
           DLHVLYSEVTRRGGHEKVVAEKKWREVGGIFKFSPTTTSASFVLRKHYLSLLYHYEQVYL
Sbjct: 61  DLHVLYSEVTRRGGHEKVVAEKKWREVGGIFKFSPTTTSASFVLRKHYLSLLYHYEQVYL 120

Query: 121 FGRQGPICAPQGPFLFSPSIFPFLLYPLFSISDFAVNLSWVLSFSSSTAPLSFGSPTRDS 180
           FGRQGPICAPQGPFLFSPSIFPFLLYPLFSISDFAVNLSWVLSFSSSTAPLSFGSPTRDS
Sbjct: 121 FGRQGPICAPQGPFLFSPSIFPFLLYPLFSISDFAVNLSWVLSFSSSTAPLSFGSPTRDS 180

Query: 181 ELAMVEYTPKTTSFSPAEGDNLSHSLLFFVGSITGTIDGKFDCGYLVTVKLGSEVLRGVL 240
           ELAMVEYTPKTTSFSPAE              +TGTIDGKFDCGYLVTVKLGSEVLRGVL
Sbjct: 181 ELAMVEYTPKTTSFSPAE--------------VTGTIDGKFDCGYLVTVKLGSEVLRGVL 240

Query: 241 YHPDQPVPSDLRPQSTNAIIPYTGGRQRHAGRRHRRRRRKTDPNHPKPNRSGYNFFFAEK 300
           YHPDQPVPSDLRPQSTNAIIPYTGGRQRH GRRHRRRRRK DPNHPKPNRSGYNFFFAEK
Sbjct: 241 YHPDQPVPSDLRPQSTNAIIPYTGGRQRHVGRRHRRRRRKADPNHPKPNRSGYNFFFAEK 300

Query: 301 HYKLKSLYPNREREFTKMIGESWNKLSPEERMVYQNIGLKDKERYKRELKEYKEKMRQAT 360
           HYKLKSLYPNREREFTKMIGESWNKLSPEERMVYQNIGLKDKERYKRELKEYKEKMRQAT
Sbjct: 301 HYKLKSLYPNREREFTKMIGESWNKLSPEERMVYQNIGLKDKERYKRELKEYKEKMRQAT 359

Query: 361 ADIQATNCSKHGE 374
           ADIQATNCSK GE
Sbjct: 361 ADIQATNCSKRGE 359

[Close]

BLAST of CmoCh01G020540 vs. NCBI nr
Match: KAG7037933.1 (High mobility group B protein 9, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 672.2 bits (1733), Expect = 2.7e-189
Identity = 335/373 (89.81%), Postives = 335/373 (89.81%), Query Frame = 0


Query: 1   MSTPARTKSWNGDVDKHYPPALATHDEVISDPIVFWDTLRRFHFVMNTKFMIPVIGGKEL 60
           MSTPARTKSWNGDVDKHYPPALATHDEVISDPIVFWDTLRRFHFVMNTKFMIPVIGGKEL
Sbjct: 1   MSTPARTKSWNGDVDKHYPPALATHDEVISDPIVFWDTLRRFHFVMNTKFMIPVIGGKEL 60

Query: 61  DLHVLYSEVTRRGGHEKVVAEKKWREVGGIFKFSPTTTSASFVLRKHYLSLLYHYEQVYL 120
           DLHVLYSEVTRRGGHEKVVAEKKWREVGGIFKFSPTTTSASFVLRKHYLSLLYHYEQVYL
Sbjct: 61  DLHVLYSEVTRRGGHEKVVAEKKWREVGGIFKFSPTTTSASFVLRKHYLSLLYHYEQVYL 120

Query: 121 FGRQGPICAPQGPFLFSPSIFPFLLYPLFSISDFAVNLSWVLSFSSSTAPLSFGSPTRDS 180
           FGRQGPICAPQ                                     APLSFGSPTRDS
Sbjct: 121 FGRQGPICAPQ-------------------------------------APLSFGSPTRDS 180

Query: 181 ELAMVEYTPKTTSFSPAEGDNLSHSLLFFVGSITGTIDGKFDCGYLVTVKLGSEVLRGVL 240
           ELAMVEYTPKTTSFSPAEGDNLSHSLLFFVGSITGTIDGKFDCGYLVTVKLGSEVLRGVL
Sbjct: 181 ELAMVEYTPKTTSFSPAEGDNLSHSLLFFVGSITGTIDGKFDCGYLVTVKLGSEVLRGVL 240

Query: 241 YHPDQPVPSDLRPQSTNAIIPYTGGRQRHAGRRHRRRRRKTDPNHPKPNRSGYNFFFAEK 300
           YHPDQPVPSDLRPQSTNAIIPYTGGRQRHAGRRHRRRRRK DPNHPKPNRSGYNFFFAEK
Sbjct: 241 YHPDQPVPSDLRPQSTNAIIPYTGGRQRHAGRRHRRRRRKADPNHPKPNRSGYNFFFAEK 300

Query: 301 HYKLKSLYPNREREFTKMIGESWNKLSPEERMVYQNIGLKDKERYKRELKEYKEKMRQAT 360
           HYKLKSLYPNREREFTKMIGESWNKLSPEERMVYQNIGLKDKERYKRELKEYKEKMRQAT
Sbjct: 301 HYKLKSLYPNREREFTKMIGESWNKLSPEERMVYQNIGLKDKERYKRELKEYKEKMRQAT 336

Query: 361 ADIQATNCSKHGE 374
           ADIQATNCSKHGE
Sbjct: 361 ADIQATNCSKHGE 336

[Close]

BLAST of CmoCh01G020540 vs. NCBI nr
Match: XP_022940773.1 (high mobility group B protein 9-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 636.3 bits (1640), Expect = 1.6e-178
Identity = 321/373 (86.06%), Postives = 322/373 (86.33%), Query Frame = 0


Query: 1   MSTPARTKSWNGDVDKHYPPALATHDEVISDPIVFWDTLRRFHFVMNTKFMIPVIGGKEL 60
           MSTPARTKSWNGDVDKHYPPALATHDEVISDPIVFWDTLRRFHFVMNTKFMIPVIGGKEL
Sbjct: 1   MSTPARTKSWNGDVDKHYPPALATHDEVISDPIVFWDTLRRFHFVMNTKFMIPVIGGKEL 60

Query: 61  DLHVLYSEVTRRGGHEKVVAEKKWREVGGIFKFSPTTTSASFVLRKHYLSLLYHYEQVYL 120
           DLHVLYSEVTRRGGHEKVVAEKKWREVGGIFKFSPTTTSASFVLRKHYLSLLYHYEQVYL
Sbjct: 61  DLHVLYSEVTRRGGHEKVVAEKKWREVGGIFKFSPTTTSASFVLRKHYLSLLYHYEQVYL 120

Query: 121 FGRQGPICAPQGPFLFSPSIFPFLLYPLFSISDFAVNLSWVLSFSSSTAPLSFGSPTRDS 180
           FGRQGPICAPQ                                     APLSFGSPTRDS
Sbjct: 121 FGRQGPICAPQ-------------------------------------APLSFGSPTRDS 180

Query: 181 ELAMVEYTPKTTSFSPAEGDNLSHSLLFFVGSITGTIDGKFDCGYLVTVKLGSEVLRGVL 240
           ELAMVEYTPKTTSFSPAE              +TGTIDGKFDCGYLVTVKLGSEVLRGVL
Sbjct: 181 ELAMVEYTPKTTSFSPAE--------------VTGTIDGKFDCGYLVTVKLGSEVLRGVL 240

Query: 241 YHPDQPVPSDLRPQSTNAIIPYTGGRQRHAGRRHRRRRRKTDPNHPKPNRSGYNFFFAEK 300
           YHPDQPVPSDLRPQSTNAIIPYTGGRQRHAGRRHRRRRRKTDPNHPKPNRSGYNFFFAEK
Sbjct: 241 YHPDQPVPSDLRPQSTNAIIPYTGGRQRHAGRRHRRRRRKTDPNHPKPNRSGYNFFFAEK 300

Query: 301 HYKLKSLYPNREREFTKMIGESWNKLSPEERMVYQNIGLKDKERYKRELKEYKEKMRQAT 360
           HYKLKSLYPNREREFTKMIGESWNKLSPEERMVYQNIGLKDKERYKRELKEYKEKMRQAT
Sbjct: 301 HYKLKSLYPNREREFTKMIGESWNKLSPEERMVYQNIGLKDKERYKRELKEYKEKMRQAT 322

Query: 361 ADIQATNCSKHGE 374
           ADIQATNCSKHGE
Sbjct: 361 ADIQATNCSKHGE 322

[Close]

BLAST of CmoCh01G020540 vs. NCBI nr
Match: KAG6608616.1 (High mobility group B protein 9, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 634.4 bits (1635), Expect = 6.1e-178
Identity = 320/373 (85.79%), Postives = 321/373 (86.06%), Query Frame = 0


Query: 1   MSTPARTKSWNGDVDKHYPPALATHDEVISDPIVFWDTLRRFHFVMNTKFMIPVIGGKEL 60
           MSTPARTKSWNGDVDKHYPPALATHDEVISDPIVFWDTLRRFHFVMNTKFMIPVIGGKEL
Sbjct: 1   MSTPARTKSWNGDVDKHYPPALATHDEVISDPIVFWDTLRRFHFVMNTKFMIPVIGGKEL 60

Query: 61  DLHVLYSEVTRRGGHEKVVAEKKWREVGGIFKFSPTTTSASFVLRKHYLSLLYHYEQVYL 120
           DLHVLYSEVTRRGGHEKVVAEKKWREVGGIFKFSPTTTSASFVLRKHYLSLLYHYEQVYL
Sbjct: 61  DLHVLYSEVTRRGGHEKVVAEKKWREVGGIFKFSPTTTSASFVLRKHYLSLLYHYEQVYL 120

Query: 121 FGRQGPICAPQGPFLFSPSIFPFLLYPLFSISDFAVNLSWVLSFSSSTAPLSFGSPTRDS 180
           FGRQGPICAPQ                                     APLSFGSPTRDS
Sbjct: 121 FGRQGPICAPQ-------------------------------------APLSFGSPTRDS 180

Query: 181 ELAMVEYTPKTTSFSPAEGDNLSHSLLFFVGSITGTIDGKFDCGYLVTVKLGSEVLRGVL 240
           ELAMVEYTPKTTSFSPAE              +TGTIDGKFDCGYLVTVKLGSEVLRGVL
Sbjct: 181 ELAMVEYTPKTTSFSPAE--------------VTGTIDGKFDCGYLVTVKLGSEVLRGVL 240

Query: 241 YHPDQPVPSDLRPQSTNAIIPYTGGRQRHAGRRHRRRRRKTDPNHPKPNRSGYNFFFAEK 300
           YHPDQPVPSDLRPQSTNAIIPYTGGRQRHAGRRHRRRRRK DPNHPKPNRSGYNFFFAEK
Sbjct: 241 YHPDQPVPSDLRPQSTNAIIPYTGGRQRHAGRRHRRRRRKADPNHPKPNRSGYNFFFAEK 300

Query: 301 HYKLKSLYPNREREFTKMIGESWNKLSPEERMVYQNIGLKDKERYKRELKEYKEKMRQAT 360
           HYKLKSLYPNREREFTKMIGESWNKLSPEERMVYQNIGLKDKERYKRELKEYKEKMRQAT
Sbjct: 301 HYKLKSLYPNREREFTKMIGESWNKLSPEERMVYQNIGLKDKERYKRELKEYKEKMRQAT 322

Query: 361 ADIQATNCSKHGE 374
           ADIQATNCSKHGE
Sbjct: 361 ADIQATNCSKHGE 322

[Close]

BLAST of CmoCh01G020540 vs. TAIR 10
Match: AT1G76110.1 (HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain )

HSP 1 Score: 382.5 bits (981), Expect = 3.9e-106
Identity = 209/356 (58.71%), Postives = 249/356 (69.94%), Query Frame = 0


Query: 16  KHYPPALATHDEVISDPIVFWDTLRRFHFVMNTKFMIPVIGGKELDLHVLYSEVTRRGGH 75
           K YP  LA H+ V+ D  VFWDTLRRFH +M+TKFMIPVIGGKELDLHVLY EVTRRGG+
Sbjct: 25  KEYPEPLALHEVVVKDSSVFWDTLRRFHSIMSTKFMIPVIGGKELDLHVLYVEVTRRGGY 84

Query: 76  EKVVAEKKWREVGGIFKFSPTTTSASFVLRKHYLSLLYHYEQVYLFGRQGPICAPQGPFL 135
           EKVV EKKWREVGG+F+FS TTTSASFVLRKHYL+LL+HYEQV+LF  +GP         
Sbjct: 85  EKVVVEKKWREVGGVFRFSATTTSASFVLRKHYLNLLFHYEQVHLFTARGP--------- 144

Query: 136 FSPSIFPFLLYPLFSISDFAVNLSWVLSFSSSTAPLSFGSPTRDSELAMVEYTPKTTSF- 195
                   LL+P   I+ F  N                  P+   E+A+VEYTP +  + 
Sbjct: 145 --------LLHP---IATFHAN------------------PSTSKEMALVEYTPPSIRYH 204

Query: 196 ---SPAEGDNLSHSLLFFVGSITGTIDGKFDCGYLVTVKLGSEVLRGVLYHPDQPVPSDL 255
               P++G +   ++        GTI+GKFDCGYLV VKLGSE+L GVLYH  QP PS  
Sbjct: 205 NTHPPSQGSSSFTAI--------GTIEGKFDCGYLVKVKLGSEILNGVLYHSAQPGPSS- 264

Query: 256 RPQS--TNAIIPY--TGGRQRHAGRRHRRRRRKTDPNHPKPNRSGYNFFFAEKHYKLKSL 315
            P +   NA++PY  TG R+R  G+R RR RR+ DPN+PKPNRSGYNFFFAEKH KLKSL
Sbjct: 265 SPTAVLNNAVVPYVETGRRRRRLGKR-RRSRRREDPNYPKPNRSGYNFFFAEKHCKLKSL 324

Query: 316 YPNREREFTKMIGESWNKLSPEERMVYQNIGLKDKERYKRELKEYKEKMRQATADI 364
           YPN+EREFTK+IGESW+ LS EERMVYQ+IGLKDKERY+REL EY+E +R    D+
Sbjct: 325 YPNKEREFTKLIGESWSNLSTEERMVYQDIGLKDKERYQRELNEYRETLRLRDGDM 332

[Close]

BLAST of CmoCh01G020540 vs. TAIR 10
Match: AT1G04880.1 (HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain )

HSP 1 Score: 252.3 bits (643), Expect = 6.1e-67
Identity = 143/349 (40.97%), Postives = 210/349 (60.17%), Query Frame = 0


Query: 23  ATHDEVISDPIVFWDTLRRFHFVMNTKFMIPVIGGKELDLHVLYSEVTRRGGHEKVVAEK 82
           AT++ V++DP +F  +L R H ++ TKFM+P+IGG++LDLH L+ EVT RGG  K++ E+
Sbjct: 23  ATYEAVVADPRLFMTSLERLHSLLGTKFMVPIIGGRDLDLHKLFVEVTSRGGINKILNER 82

Query: 83  KWREVGGIFKFSPTTTSASFVLRKHYLSLLYHYEQVYLFGRQGPICAPQGPFLFSPSIFP 142
           +W+EV   F F PT T+AS+VLRK+Y SLL +YEQ+Y F   G I  P    + SPS  P
Sbjct: 83  RWKEVTATFVFPPTATNASYVLRKYYFSLLNNYEQIYFFRSNGQI-PPDS--MQSPSARP 142

Query: 143 FLLYPLFSISDFAVNLSWVLSFSSSTAPLSFGSPTRDSELAMVEYTPKTTSFSPAE--GD 202
             +                            G+     EL  + +TP+    + AE  G 
Sbjct: 143 CFIQ---------------------------GAIRPSQELQALTFTPQ-PKINTAEFLGG 202

Query: 203 NLSHSLLFFVGSITGTIDGKFDCGYLVTVKLGSEVLRGVLYH-PDQPVPSDLRPQSTNAI 262
           +L+ S      ++ G IDGKF+ GYLVTV +GSE L+GVLY    Q   S   PQ ++ +
Sbjct: 203 SLAGS------NVVGVIDGKFESGYLVTVTIGSEQLKGVLYQLLPQNTVSYQTPQQSHGV 262

Query: 263 IPYT-----------GGRQRHAGRRHRRRRRKTDPNHPKPNRSGYNFFFAEKHYKLKSLY 322
           +P T           GG  +   RR +   ++ DP+HPKPNRSGYNFFFAE+H +LK L+
Sbjct: 263 LPNTLNISANPQGVAGGVTKRRRRRKKSEIKRRDPDHPKPNRSGYNFFFAEQHARLKPLH 322

Query: 323 PNREREFTKMIGESWNKLSPEERMVYQNIGLKDKERYKRELKEYKEKMR 358
           P ++R+ ++MIGE WNKL+ +E+++YQ   ++DKERY+ E+++Y+EK +
Sbjct: 323 PGKDRDISRMIGELWNKLNEDEKLIYQGKAMEDKERYRTEMEDYREKKK 334

[Close]

BLAST of CmoCh01G020540 vs. TAIR 10
Match: AT3G13350.1 (HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain )

HSP 1 Score: 195.3 bits (495), Expect = 8.8e-50
Identity = 125/335 (37.31%), Postives = 177/335 (52.84%), Query Frame = 0


Query: 23  ATHDEVISDPIVFWDTLRRFHFVMNTKFMIPVIGGKELDLHVLYSEVTRRGGHEKVVAEK 82
           A +D+++ +  +FW+ LR F  + +    +P +GG  LDLH L+ EVT RGG E+VV ++
Sbjct: 34  AKYDDLVRNSALFWEKLRAFLGLTSKTLKVPTVGGNTLDLHRLFIEVTSRGGIERVVKDR 93

Query: 83  KWREVGGIFKFSPTTTSASFVLRKHYLSLLYHYEQVYLFGRQGPICAPQGPFLFSPSIFP 142
           KW+EV G F F  T TSASFVLRK+YL  L+  E VY   +                   
Sbjct: 94  KWKEVIGAFSFPTTITSASFVLRKYYLKFLFQLEHVYYLEK------------------- 153

Query: 143 FLLYPLFSISDFAVNLSWVLSFSSSTAPLSFGSPTRDSELAMVEYTPKTTSFSPAEGDNL 202
                                      P+S    T ++  ++   +P     +P EG + 
Sbjct: 154 ---------------------------PVSSLQSTDEALKSLANESP-----NPEEGIDE 213

Query: 203 SHSLLFFVG-SITGTIDGKFDCGYLVTVKLGSEVLRGVLYH-PDQPVPSDLRPQSTNAII 262
                  VG  + G IDGKFD GYLVT+KLGS+ L+GVLYH P  P  S    ++ +AI+
Sbjct: 214 PQ-----VGYEVQGFIDGKFDSGYLVTMKLGSQELKGVLYHIPQTPSQSQQTMETPSAIV 273

Query: 263 PYTGGRQRHAGRRHRRRRR--KTDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKM 322
                  + + RRHR++ +    D   PK +RSGYNFFFAE++ +LK  Y  +ER  TK 
Sbjct: 274 -------QSSQRRHRKKSKLAVVDTQKPKCHRSGYNFFFAEQYARLKPEYHGQERSITKK 305

Query: 323 IGESWNKLSPEERMVYQNIGLKDKERYKRELKEYK 354
           IG  W+ L+  E+ VYQ+ G+KD ERY+ E+ EYK
Sbjct: 334 IGHMWSNLTESEKQVYQDKGVKDVERYRIEMLEYK 305

[Close]

BLAST of CmoCh01G020540 vs. TAIR 10
Match: AT1G55650.1 (HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain )

HSP 1 Score: 162.5 bits (410), Expect = 6.4e-40
Identity = 115/362 (31.77%), Postives = 169/362 (46.69%), Query Frame = 0


Query: 4   PARTKSWNGDVDKHYPPALATHDEVISDPIVFWDTLRRFHFVMNTKFMIPVIGGKELDLH 63
           PA   + + DV  H       + +++ +P +FW+ LR FH   + KF IP++GGK LDLH
Sbjct: 12  PANASALDNDVSSHMS---MLYQDIVRNPELFWEMLRDFHESSDKKFKIPIVGGKSLDLH 71

Query: 64  VLYSEVTRRGGHEKVVAEKKWREVGGIFKFSPTTTSASFVLRKHYLSLLYHYEQVYLFGR 123
            L++EVT RGG EKV+ +++ +EV   F F  T T+++FVLRK YL +L+ +E +Y F  
Sbjct: 72  RLFNEVTSRGGLEKVIKDRRCKEVIDAFNFKTTITNSAFVLRKSYLKMLFEFEHLYYF-- 131

Query: 124 QGPICAPQGPFLFSPSIFPFLLYPLFSISDFAVNLSWVLSFSSSTAPLSFGSPTRDSELA 183
           Q P+                     F   + A+ L            L   S  RD +  
Sbjct: 132 QAPLST-------------------FWEKEKALKL------------LIEKSANRDKD-- 191

Query: 184 MVEYTPKTTSFSPAEGDNLSHSLLFFVGSITGTIDGKFDCGYLVTVKLGSEVLRGVLYHP 243
             E  P T                     ITG IDGKF+ GYL++ K+GSE L+G+LYH 
Sbjct: 192 SQELKPGTV--------------------ITGIIDGKFESGYLISTKVGSEKLKGMLYH- 251

Query: 244 DQPVPSDLRPQSTNAIIPYTGGRQRHAGRRHRRRRRKTDPNHPKPNRSGYNFFFAEKHYK 303
                          I P T       G++  +  +      PK  R+GYNFF AE+  +
Sbjct: 252 ---------------ISPET-----KRGKKKAKSSQGDSHKPPKRQRTGYNFFVAEQSVR 294

Query: 304 LKSLYPNREREFTKMIGESWNKLSPEERMVYQNIGLKDKERYKRELKEYKEKMRQATADI 363
           +K+    ++    K  G  W  LS  +R VY     +D +RYK E+ +Y+  M    A+I
Sbjct: 312 IKAENAGQKVSSPKNFGNMWTNLSESDRKVYYEKSREDGKRYKMEILQYRSLMESRVAEI 294

Query: 364 QA 366
            A
Sbjct: 372 VA 294

[Close]

BLAST of CmoCh01G020540 vs. TAIR 10
Match: AT3G28730.1 (high mobility group )

HSP 1 Score: 47.4 bits (111), Expect = 3.0e-05
Identity = 26/82 (31.71%), Postives = 47/82 (57.32%), Query Frame = 0


Query: 273 RHRRRRRKTDPNHPKPNRSGYNFFFAEKHYKLKSLYPN-REREFTKMIGESWNKLSPEER 332
           + ++ ++K DPN PK   SG+ FF   +   +K  +P     E  K++G+ W ++S +++
Sbjct: 549 KRKKPKKKKDPNAPKRAMSGFMFFSQMERDNIKKEHPGIAFGEVGKVLGDKWRQMSADDK 608

Query: 333 MVYQNIGLKDKERYKRELKEYK 354
             Y+     DK+RYK E+ +YK
Sbjct: 609 EPYEAKAQVDKQRYKDEISDYK 630

The following BLAST results are available for this feature:

BLAST of CmoCh01G020540 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SGS2	5.5e-105	58.71	High mobility group B protein 9 OS=Arabidopsis thaliana OX=3702 GN=HMGB9 PE=1 SV...	[more]
Q9MAT6	8.6e-66	40.97	High mobility group B protein 15 OS=Arabidopsis thaliana OX=3702 GN=HMGB15 PE=2 ...	[more]
Q9LTT3	1.2e-48	37.31	High mobility group B protein 10 OS=Arabidopsis thaliana OX=3702 GN=HMGB10 PE=1 ...	[more]
Q9LG02	8.9e-39	31.77	Putative high mobility group B protein 11 OS=Arabidopsis thaliana OX=3702 GN=HMG...	[more]
Q68CP9	4.5e-14	35.48	AT-rich interactive domain-containing protein 2 OS=Homo sapiens OX=9606 GN=ARID2...	[more]

BLAST of CmoCh01G020540 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FKI9	1.7e-205	95.98	high mobility group B protein 9-like isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1FQ88	7.8e-179	86.06	high mobility group B protein 9-like isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1IY83	2.0e-174	84.45	high mobility group B protein 9-like OS=Cucurbita maxima OX=3661 GN=LOC111481010...	[more]
A0A5A7VAK3	1.8e-159	76.68	High mobility group B protein 9 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_...	[more]
E5GCD0	1.8e-159	76.68	High mobility group family OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]

BLAST of CmoCh01G020540 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022940771.1	3.4e-205	95.98	high mobility group B protein 9-like isoform X1 [Cucurbita moschata] >XP_0229407...	[more]
XP_023525870.1	1.2e-202	94.91	high mobility group B protein 9-like isoform X1 [Cucurbita pepo subsp. pepo] >XP...	[more]
KAG7037933.1	2.7e-189	89.81	High mobility group B protein 9, partial [Cucurbita argyrosperma subsp. argyrosp...	[more]
XP_022940773.1	1.6e-178	86.06	high mobility group B protein 9-like isoform X2 [Cucurbita moschata]	[more]
KAG6608616.1	6.1e-178	85.79	High mobility group B protein 9, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of CmoCh01G020540 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G76110.1	3.9e-106	58.71	HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain	[more]
AT1G04880.1	6.1e-67	40.97	HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain	[more]
AT3G13350.1	8.8e-50	37.31	HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain	[more]
AT1G55650.1	6.4e-40	31.77	HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain	[more]
AT3G28730.1	3.0e-05	31.71	high mobility group	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 342..369
None	No IPR available	SMART	SM01014	ARID_2	coord: 26..116 e-value: 1.8E-28 score: 110.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 246..292
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 267..284
None	No IPR available	PANTHER	PTHR46691	HIGH MOBILITY GROUP B PROTEIN 9	coord: 13..131 coord: 208..365
None	No IPR available	PANTHER	PTHR46691:SF1	HIGH MOBILITY GROUP B PROTEIN 9	coord: 13..131
None	No IPR available	PANTHER	PTHR46691:SF1	HIGH MOBILITY GROUP B PROTEIN 9	coord: 208..365
None	No IPR available	CDD	cd16872	ARID_HMGB9-like	coord: 31..116 e-value: 3.39799E-45 score: 148.181
None	No IPR available	CDD	cd01390	HMGB-UBF_HMG-box	coord: 286..350 e-value: 6.90447E-20 score: 80.7497
IPR009071	High mobility group box domain	SMART	SM00398	hmgende2	coord: 285..354 e-value: 6.4E-14 score: 62.2
IPR009071	High mobility group box domain	PFAM	PF00505	HMG_box	coord: 286..353 e-value: 1.6E-11 score: 44.5
IPR009071	High mobility group box domain	PROSITE	PS50118	HMG_BOX_2	coord: 286..353 score: 14.571702
IPR001606	ARID DNA-binding domain	SMART	SM00501	bright_3	coord: 30..121 e-value: 8.9E-31 score: 118.2
IPR001606	ARID DNA-binding domain	PFAM	PF01388	ARID	coord: 35..116 e-value: 7.6E-18 score: 65.0
IPR001606	ARID DNA-binding domain	PROSITE	PS51011	ARID	coord: 29..120 score: 24.535831
IPR036910	High mobility group box domain superfamily	GENE3D	1.10.30.10	High mobility group box domain	coord: 270..367 e-value: 1.3E-19 score: 72.4
IPR036910	High mobility group box domain superfamily	SUPERFAMILY	47095	HMG-box	coord: 283..358
IPR036431	ARID DNA-binding domain superfamily	GENE3D	1.10.150.60		coord: 25..126 e-value: 1.1E-25 score: 91.5
IPR036431	ARID DNA-binding domain superfamily	SUPERFAMILY	46774	ARID-like	coord: 26..127

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh01G020540.1	CmoCh01G020540.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010197	polar nucleus fusion
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding