CmoCh01G020450 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh01G020450
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	ribonuclease P protein subunit p25-like protein
Location	Cmo_Chr01: 14319916 .. 14323597 (-)
RNA-Seq Expression	CmoCh01G020450
Synteny	CmoCh01G020450

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGTAGTCGGTTAGGGTAGTTTTCGCAATAGTGCCGCTACTATATAAAGGGCGAAACACCAGTGCTGGCGATTTAGGGCGTAACAGAAGAAACAAGCCGTAGAAGAGGGCTCTCGTTTGTGGAGCGGATAATCCTACTTTCAATCGCTGTAGTCCTCAGATCGAACCTCATAGCTTCAAGTATGCTTCATTTTGCTTGTGTTTGGAGACGACTTTCATCGCCCTCTGCACTTTCTCTTTCGTTTTCTGTATTTTACTTCTCTTTCTGGTTCGTAGCTTTTCATTCTTTACTCTAGGATGTTTCGATGCTGTTCAATGTTCGTATCTTTGTTTGTTTTGCGGGTTGGAGCAGTGGGAGATTATTGATTTTGTTTGCATCTGTAAAATCGGATAACTGTCTTGGCTGCGCAGATGGATCGGTACCACAGAGTTGAGAAGCCAAGGGCTGAGACTCCAATTGACGAGAATGAGATTCGGATTACAAGCCAGGGAAGGATGCGCAACTATATCACATATGCCATGACCCTACTTCAGGTTTCTCTCCATATGTTTGGCTTATTTGCTGGGGTTAATTGTCTTTCTAAATCTCTTAATACGTGCTTTGAGTTTTTTTACTGTAAAATGTCGTCTTACTATGGAATTAACAAATTGTGGGTTCTGCATGTAATTCGTAGTGTTAATAATAATAAATTGTGTTGGCATCATCAACGAGCTGTTTTGGCACAAAGGATTGTCATCTTATTTTCACTGTCTTATGTGCAAAACTATGAATCTCTGTAGTATATGCACTCCCCTGCTCTCATTGATTGGCGCTAGCTAGTGGAACAAATTGGAAAGTTCATTGTCACGAATCATGCGATATGGCTATTAGTTTTATAAAAAATTCGTAGTGCTTTCATTCTATGTATGGCACTAGGGGGTTGCTGACCTAAAATATCAAATTCTGTGTTTCTATTAGTTTTATAAAAAATTCGTAGTGCTTTCATTCTATGTATGGCACTAGGGGGTTGCTGACCTAAAATATCAAATTCTGTGTTTCTAATCAGCAGTGTTGTTTATCCTTTGCACGATTCAATGGCAGTAGGTCTTTTAGGCATTTAGGTCATTAATCTTTAATTGCTGTTCCGTTTATTTTTTAATGCATGGGTAAACATAATAAGGAATAAATTGCAAATTCTTGTTGTATTTGTACTACGTGCAAGTCAATTTTGTTTTCTGAAGAGAGAATGAGAATATGGCGTACTCCTTCATTTTTATGCTGATTACTCCTTGTTTTAAAGGAAATGCATGGTATTATGTGTATTATATTACATTTATTGATGATAAGAATTTTCATTAATTTGACATTTTGTTAGTTAAACCCATTGTATATATCATACCCTTTTCCATACATTTTGCAGGAAAAGGGTTCCAATGAAATTGTTTTCAAGGCTATGGGAAGGGCTATAAACAAGACTGTGACCATCGTGGAACTAATCAAGGTTTTCTGTAATAGTTTGAGTTGCTGATGCTGAACCACTTGATACTTTTGAGATTGGGCCTGATAGTGTTTCTGTTGATAAATGCAGAGGCGAATTGTAGGTCTTCATCAGAATACCTCAATTGGCTCCACGGACATCACTGATACATGGGAGCCCTTGGAGGAAGGCCTTCTTCCGTAAGATAATTTTAAACACTAGTCATGCGAAGATTATTCAATCTAGCCTCTTACTTTATAATACCATATTCATTATTTCAATGACATGAGTCTTTCAACATGTGGAAAATTTCTTGCTTTGAGCTTTGTTTCATAGAGTTATTTGATTGTTGTTACAGATTGGAAACAACAAGGCATGTCTCGATGATTGTGATAACACTTTCAAAGAAAGAATTAAATACATCTTCTGTGGGGTGAGTCCTTACTTGCTTTTAAGGTGTCTCATTTTAAATAAATTTGAGACTGATGAACTTATATGAAGATATTCTCATTTTATTTATTATCTGATGGTCTATGGCATTAAACATGAACAAGACCTTAAGTTCAATTTCTCTCTCAGATTCATTTATTATAATTTGTAAGATATGCAGGGTTTTGCTTACGTAGGGTCTGTGGATTGAATGATTATTACTAATAATTTAAAAAATTTCTGAAGACTTTATTTAAGATTCTTCAGATTTGTTAGTCTTCTACATCTCATAATTGTTAAATGCTTTTCGACAAATAAACAATTTTCTCACACGTAACTATTACCTCAGGTACCAGCCTCCACTTCCTGCTGAGCTGGTGAAAACTTACGACTACGAGGGAGGTACTGACATGTCTTATCATATTATTATTTTTATTATTGGACTTATTGTATTGCATATTCGACACTGTTGTTTTTGTATACTGCAGAAGGTTCACCTCATGATCAGGGTCCAGGACGAGGTAGAGAACGGGACCGTAATGGCAGAGGAAGAGCCCGGGGTAGAGGTGTGTAGCATTTGATTTCATTTATCAGTCTTTGTTTAGCCCTTTGTCATGTTATTGTGTATGGAAGATAATGGCTTTTATGGTTAGTGACAGACTTGCAGTGCCAAATATAGGAATTGGAATTTTGTAATTCGTTCAGTTTCTTGCATGAGGGAAAGTGAATATGCCCCCGTAACAGTTTGTTTTTATTGTTAAATTGTACTTGTTTTAGGACCCCCAGGCAATGGCTATGTGACAAATGAATATGATGATGGAGATTGGGACCGTAATAGGGGCGGAAATGTAAGAGGGAGGGGTCGAGGGAGGAGTGGTGGTAATTTCCGTGACCGTGGAAGAGGAGGATACAATGGTCCTCAGTATGATTTCCAGCAAGATGGAGGATACAACCAAGACTTACCAGCTCAAGGCCGTGGTATTTTCTTATTTCCTTTTCAGTATGGCTTATATTTAATTGATCTTTGATTGGGCTATTTAGCTGGGATATGCAGGGTTTGGTCAATACTTTTTGTATTGAATTAAAGCCGCAGAGGGTTTTATTCAGCCCTATATTTCAACTATTCCCTTTCCTTCGAGCTCGTGTTCACTTCGGAATTGTCTACATTTTCAGGGCGTGGACGTGGAAGGGGTGGTTTTCGTGGAAGGGGCCGTGGTTTCAGGACTAATGGAGGACCGATCCAAGCTGCCGCATGAGGTGGTTAAAGGTTAAAATCTTAATTATATGCAATATTATCATTAGGATTCTCTCTTCTTTTAGTTGGTAGTTGCAAGGGACAACTATATTATAACAGAGTAGGAATTTGACTTCTTTTATTTTTGGCCTTTGGATTGGTAGTTAGATGGAAGAAGTGTTTGAAAGAGCCGCCATGTGAGGGTGGCGACTCGTTTTCTTGTAGACTTAGGTGAGCTGCTGCTTTGACGTTTGTATTTTAGTATTTTTAAAAAAAGAAACTCTTGGCCGCCGGACACACTGTATCATTCTTTTATTTGAGTTCTTAGGATATTCTTGTCTTTCGCCTCTCTCCTCCTCTCCTTTTCGTTACTTGGTCACATTTTGAGTTCTCTGTTACAGTTTCTTTTTTCACCTCTGATAATATCCCGACCACGGCCACAAATGTCGTTCGCTGTTTTTTAATGTATTAATTTCAATGCACTCGTTTCTATCAATTTCTAAGTCTACTCTGTTTTTTAATGTAATTAAATAAATATTGTTTTTTTAATAAAAGAAATGTTT

mRNA sequence

AAGTAGTCGGTTAGGGTAGTTTTCGCAATAGTGCCGCTACTATATAAAGGGCGAAACACCAGTGCTGGCGATTTAGGGCGTAACAGAAGAAACAAGCCGTAGAAGAGGGCTCTCGTTTGTGGAGCGGATAATCCTACTTTCAATCGCTGTAGTCCTCAGATCGAACCTCATAGCTTCAAGTATGCTTCATTTTGCTTGTGTTTGGAGACGACTTTCATCGCCCTCTGCACTTTCTCTTTCGTTTTCTGTATTTTACTTCTCTTTCTGATGGATCGGTACCACAGAGTTGAGAAGCCAAGGGCTGAGACTCCAATTGACGAGAATGAGATTCGGATTACAAGCCAGGGAAGGATGCGCAACTATATCACATATGCCATGACCCTACTTCAGGAAAAGGGTTCCAATGAAATTGTTTTCAAGGCTATGGGAAGGGCTATAAACAAGACTGTGACCATCGTGGAACTAATCAAGAGGCGAATTGTAGGTCTTCATCAGAATACCTCAATTGGCTCCACGGACATCACTGATACATGGGAGCCCTTGGAGGAAGGCCTTCTTCCATTGGAAACAACAAGGCATGTCTCGATGATTGTGATAACACTTTCAAAGAAAGAATTAAATACATCTTCTGTGGGGTACCAGCCTCCACTTCCTGCTGAGCTGGTGAAAACTTACGACTACGAGGGAGAAGGTTCACCTCATGATCAGGGTCCAGGACGAGGTAGAGAACGGGACCGTAATGGCAGAGGAAGAGCCCGGGGTAGAGGACCCCCAGGCAATGGCTATGTGACAAATGAATATGATGATGGAGATTGGGACCGTAATAGGGGCGGAAATGTAAGAGGGAGGGGTCGAGGGAGGAGTGGTGGTAATTTCCGTGACCGTGGAAGAGGAGGATACAATGGTCCTCAGTATGATTTCCAGCAAGATGGAGGATACAACCAAGACTTACCAGCTCAAGGCCGTGGGCGTGGACGTGGAAGGGGTGGTTTTCGTGGAAGGGGCCGTGGTTTCAGGACTAATGGAGGACCGATCCAAGCTGCCGCATGAGGTGGTTAAAGGTTAAAATCTTAATTATATGCAATATTATCATTAGGATTCTCTCTTCTTTTAGTTGGTAGTTGCAAGGGACAACTATATTATAACAGAGTAGGAATTTGACTTCTTTTATTTTTGGCCTTTGGATTGGTAGTTAGATGGAAGAAGTGTTTGAAAGAGCCGCCATGTGAGGGTGGCGACTCGTTTTCTTGTAGACTTAGGTGAGCTGCTGCTTTGACGTTTGTATTTTAGTATTTTTAAAAAAAGAAACTCTTGGCCGCCGGACACACTGTATCATTCTTTTATTTGAGTTCTTAGGATATTCTTGTCTTTCGCCTCTCTCCTCCTCTCCTTTTCGTTACTTGGTCACATTTTGAGTTCTCTGTTACAGTTTCTTTTTTCACCTCTGATAATATCCCGACCACGGCCACAAATGTCGTTCGCTGTTTTTTAATGTATTAATTTCAATGCACTCGTTTCTATCAATTTCTAAGTCTACTCTGTTTTTTAATGTAATTAAATAAATATTGTTTTTTTAATAAAAGAAATGTTT

Coding sequence (CDS)

ATGGATCGGTACCACAGAGTTGAGAAGCCAAGGGCTGAGACTCCAATTGACGAGAATGAGATTCGGATTACAAGCCAGGGAAGGATGCGCAACTATATCACATATGCCATGACCCTACTTCAGGAAAAGGGTTCCAATGAAATTGTTTTCAAGGCTATGGGAAGGGCTATAAACAAGACTGTGACCATCGTGGAACTAATCAAGAGGCGAATTGTAGGTCTTCATCAGAATACCTCAATTGGCTCCACGGACATCACTGATACATGGGAGCCCTTGGAGGAAGGCCTTCTTCCATTGGAAACAACAAGGCATGTCTCGATGATTGTGATAACACTTTCAAAGAAAGAATTAAATACATCTTCTGTGGGGTACCAGCCTCCACTTCCTGCTGAGCTGGTGAAAACTTACGACTACGAGGGAGAAGGTTCACCTCATGATCAGGGTCCAGGACGAGGTAGAGAACGGGACCGTAATGGCAGAGGAAGAGCCCGGGGTAGAGGACCCCCAGGCAATGGCTATGTGACAAATGAATATGATGATGGAGATTGGGACCGTAATAGGGGCGGAAATGTAAGAGGGAGGGGTCGAGGGAGGAGTGGTGGTAATTTCCGTGACCGTGGAAGAGGAGGATACAATGGTCCTCAGTATGATTTCCAGCAAGATGGAGGATACAACCAAGACTTACCAGCTCAAGGCCGTGGGCGTGGACGTGGAAGGGGTGGTTTTCGTGGAAGGGGCCGTGGTTTCAGGACTAATGGAGGACCGATCCAAGCTGCCGCATGA

Protein sequence

MDRYHRVEKPRAETPIDENEIRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKTVTIVELIKRRIVGLHQNTSIGSTDITDTWEPLEEGLLPLETTRHVSMIVITLSKKELNTSSVGYQPPLPAELVKTYDYEGEGSPHDQGPGRGRERDRNGRGRARGRGPPGNGYVTNEYDDGDWDRNRGGNVRGRGRGRSGGNFRDRGRGGYNGPQYDFQQDGGYNQDLPAQGRGRGRGRGGFRGRGRGFRTNGGPIQAAA

Homology

[Close]

BLAST of CmoCh01G020450 vs. ExPASy Swiss-Prot
Match: Q99JH1 (Ribonuclease P protein subunit p25-like protein OS=Mus musculus OX=10090 GN=Rpp25l PE=1 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 1.3e-15
Identity = 47/136 (34.56%), Postives = 70/136 (51.47%), Query Frame = 0


Query: 1   MDRYHR-------VEKPRAETPIDENEIRITSQGRMRNYITYAMTLLQEKGSNEIVFKAM 60
           M++Y R          P  + P D  E+R+    ++RN +  A+  L+   +  +VF   
Sbjct: 1   MEQYRRAGSVELPASSPMPQLPPDTLEMRVRDGSKIRNLLGLALGRLEGGSTRHVVFSGS 60

Query: 61  GRAINKTVTIVELIKRRIVGLHQNTSIGSTDITDTWEPL--EEGLLPLETTRHVSMIVIT 120
           GRA  K V+  E++KRR+ GLHQ T +      D+W P   + GL PL   RHV  + + 
Sbjct: 61  GRAAGKAVSCAEIVKRRVPGLHQLTKLRFLQTEDSWVPTSPDTGLDPLTVRRHVPAVWVL 120

Query: 121 LSKKELNTSSVGYQPP 128
           LS+  L+ S  GYQPP
Sbjct: 121 LSRDPLDPSECGYQPP 136

[Close]

BLAST of CmoCh01G020450 vs. ExPASy Swiss-Prot
Match: Q8N5L8 (Ribonuclease P protein subunit p25-like protein OS=Homo sapiens OX=9606 GN=RPP25L PE=1 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 3.7e-15
Identity = 43/120 (35.83%), Postives = 65/120 (54.17%), Query Frame = 0


Query: 10  PRAETPIDENEIRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKTVTIVELIKR 69
           P  + P D  E+R+    ++RN +  A+  L+   +  +VF   GRA  K V+  E++KR
Sbjct: 17  PMPQLPPDTLEMRVRDGSKIRNLLGLALGRLEGGSARHVVFSGSGRAAGKAVSCAEIVKR 76

Query: 70  RIVGLHQNTSIGSTDITDTWEPL--EEGLLPLETTRHVSMIVITLSKKELNTSSVGYQPP 128
           R+ GLHQ T +      D+W P   + GL PL   RHV  + + LS+  L+ +  GYQPP
Sbjct: 77  RVPGLHQLTKLRFLQTEDSWVPASPDTGLDPLTVRRHVPAVWVLLSRDPLDPNECGYQPP 136

[Close]

BLAST of CmoCh01G020450 vs. ExPASy Swiss-Prot
Match: Q2KIR4 (Ribonuclease P protein subunit p25-like protein OS=Bos taurus OX=9913 GN=RPP25L PE=2 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 4.5e-13
Identity = 50/157 (31.85%), Postives = 75/157 (47.77%), Query Frame = 0


Query: 10  PRAETPIDENEIRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKTVTIVELIKR 69
           P  + P D  E+R+ +  ++RN +  A+  L+   +  +VF   GRA  K V+  E++KR
Sbjct: 17  PMPQLPPDTLEMRVRAGSKIRNLLGLALERLEGGSARHVVFSGSGRAAGKAVSCAEIVKR 76

Query: 70  RIVGLHQNTSIGSTDITDTWEPL--EEGLLPLETTRHVSMIVITLSKKELNTSSVGYQPP 129
           R+ GL+Q T +      D+W P   + GL PL    HV  + + LS+  L+ +  GYQPP
Sbjct: 77  RVPGLYQLTKLRFLQTEDSWVPTSPDTGLDPLTVRSHVPAVWVLLSRDPLDPNEYGYQPP 136

Query: 130 LPAELVKTYDYEGEGSPHDQGPGRGRERDRNGRGRAR 165
                         G+P D GP          R RAR
Sbjct: 137 --------------GAPPDLGPTPASSCGPQPRRRAR 159

[Close]

BLAST of CmoCh01G020450 vs. ExPASy Swiss-Prot
Match: Q91WE3 (Ribonuclease P protein subunit p25 OS=Mus musculus OX=10090 GN=Rpp25 PE=2 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 1.0e-12
Identity = 39/117 (33.33%), Postives = 60/117 (51.28%), Query Frame = 0


Query: 21  IRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKTVTIVELIKRRIVGLHQNTSI 80
           +R+    ++RN + +A   + +  +  IVF   GRA  KTVT  E++KRR+ GLHQ T +
Sbjct: 38  MRVKEGSKIRNLLAFATASMAQPATRAIVFSGCGRATTKTVTCAEILKRRLAGLHQVTRL 97

Query: 81  GSTDITDTWEPLEEGLLP----------LETTRHVSMIVITLSKKELNTSSVGYQPP 128
               + + W+ L  G  P          L   ++V  + I LSK  L+   +GYQPP
Sbjct: 98  RYRSVREVWQSLPPGPTPGQTPSDPAASLSVLKNVPSLAILLSKDALDPRQLGYQPP 154

[Close]

BLAST of CmoCh01G020450 vs. ExPASy Swiss-Prot
Match: Q5PPN2 (Ribonuclease P protein subunit p25 OS=Rattus norvegicus OX=10116 GN=Rpp25 PE=2 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 1.0e-12
Identity = 39/117 (33.33%), Postives = 60/117 (51.28%), Query Frame = 0


Query: 21  IRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKTVTIVELIKRRIVGLHQNTSI 80
           +R+    ++RN + +A   + +  +  IVF   GRA  KTVT  E++KRR+ GLHQ T +
Sbjct: 38  MRVKEGSKIRNLLAFATASMAQPATRAIVFSGCGRATTKTVTCAEILKRRLAGLHQVTRL 97

Query: 81  GSTDITDTWEPLEEGLLP----------LETTRHVSMIVITLSKKELNTSSVGYQPP 128
               + + W+ L  G  P          L   ++V  + I LSK  L+   +GYQPP
Sbjct: 98  RYRSVREVWQSLPPGPTPGQTPSDPAASLSVLKNVPSLAILLSKDALDPRQLGYQPP 154

[Close]

BLAST of CmoCh01G020450 vs. ExPASy TrEMBL
Match: A0A6J1FSH3 (ribonuclease P protein subunit p25-like protein OS=Cucurbita moschata OX=3662 GN=LOC111446464 PE=4 SV=1)

HSP 1 Score: 510.4 bits (1313), Expect = 4.5e-141
Identity = 260/260 (100.00%), Postives = 260/260 (100.00%), Query Frame = 0


Query: 1   MDRYHRVEKPRAETPIDENEIRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKT 60
           MDRYHRVEKPRAETPIDENEIRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKT
Sbjct: 1   MDRYHRVEKPRAETPIDENEIRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKT 60

Query: 61  VTIVELIKRRIVGLHQNTSIGSTDITDTWEPLEEGLLPLETTRHVSMIVITLSKKELNTS 120
           VTIVELIKRRIVGLHQNTSIGSTDITDTWEPLEEGLLPLETTRHVSMIVITLSKKELNTS
Sbjct: 61  VTIVELIKRRIVGLHQNTSIGSTDITDTWEPLEEGLLPLETTRHVSMIVITLSKKELNTS 120

Query: 121 SVGYQPPLPAELVKTYDYEGEGSPHDQGPGRGRERDRNGRGRARGRGPPGNGYVTNEYDD 180
           SVGYQPPLPAELVKTYDYEGEGSPHDQGPGRGRERDRNGRGRARGRGPPGNGYVTNEYDD
Sbjct: 121 SVGYQPPLPAELVKTYDYEGEGSPHDQGPGRGRERDRNGRGRARGRGPPGNGYVTNEYDD 180

Query: 181 GDWDRNRGGNVRGRGRGRSGGNFRDRGRGGYNGPQYDFQQDGGYNQDLPAQGRGRGRGRG 240
           GDWDRNRGGNVRGRGRGRSGGNFRDRGRGGYNGPQYDFQQDGGYNQDLPAQGRGRGRGRG
Sbjct: 181 GDWDRNRGGNVRGRGRGRSGGNFRDRGRGGYNGPQYDFQQDGGYNQDLPAQGRGRGRGRG 240

Query: 241 GFRGRGRGFRTNGGPIQAAA 261
           GFRGRGRGFRTNGGPIQAAA
Sbjct: 241 GFRGRGRGFRTNGGPIQAAA 260

[Close]

BLAST of CmoCh01G020450 vs. ExPASy TrEMBL
Match: A0A6J1J1F5 (ribonuclease P protein subunit p25-like protein OS=Cucurbita maxima OX=3661 GN=LOC111481000 PE=4 SV=1)

HSP 1 Score: 492.7 bits (1267), Expect = 9.7e-136
Identity = 255/263 (96.96%), Postives = 256/263 (97.34%), Query Frame = 0


Query: 1   MDRYHRVEKPRAETPIDENEIRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKT 60
           MDRYHRVEKPRAETPIDENEIRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKT
Sbjct: 1   MDRYHRVEKPRAETPIDENEIRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKT 60

Query: 61  VTIVELIKRRIVGLHQNTSIGSTDITDTWEPLEEGLLPLETTRHVSMIVITLSKKELNTS 120
           VTIVELIKRRIVGLHQNTSIGSTDITDTWEPLEEGLLPLETTRHVSMIVITLSKKELNTS
Sbjct: 61  VTIVELIKRRIVGLHQNTSIGSTDITDTWEPLEEGLLPLETTRHVSMIVITLSKKELNTS 120

Query: 121 SVGYQPPLPAELVKT---YDYEGEGSPHDQGPGRGRERDRNGRGRARGRGPPGNGYVTNE 180
           SVGYQPPLPAELVKT   YDYEGEGSPHD GPGRGRER RNGRGRARGRGPPGNGYVTNE
Sbjct: 121 SVGYQPPLPAELVKTYVEYDYEGEGSPHDLGPGRGRERGRNGRGRARGRGPPGNGYVTNE 180

Query: 181 YDDGDWDRNRGGNVRGRGRGRSGGNFRDRGRGGYNGPQYDFQQDGGYNQDLPAQGRGRGR 240
           YDDGDWDRNRGGNVRGRGRGRSGGNFR RGRGGYNGPQYD QQDGGYNQDLPAQGRGRGR
Sbjct: 181 YDDGDWDRNRGGNVRGRGRGRSGGNFRGRGRGGYNGPQYDLQQDGGYNQDLPAQGRGRGR 240

Query: 241 GRGGFRGRGRGFRTNGGPIQAAA 261
           GRGGFRGRGRGFRT+GGPIQAAA
Sbjct: 241 GRGGFRGRGRGFRTSGGPIQAAA 263

[Close]

BLAST of CmoCh01G020450 vs. ExPASy TrEMBL
Match: A0A0A0LJ75 (Alba domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G874340 PE=4 SV=1)

HSP 1 Score: 477.6 bits (1228), Expect = 3.2e-131
Identity = 249/264 (94.32%), Postives = 253/264 (95.83%), Query Frame = 0


Query: 1   MDRYHRVEKPRAETPIDENEIRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKT 60
           MDRYHRVEKPRAETPIDENEIRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKT
Sbjct: 36  MDRYHRVEKPRAETPIDENEIRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKT 95

Query: 61  VTIVELIKRRIVGLHQNTSIGSTDITDTWEPLEEGLLPLETTRHVSMIVITLSKKELNTS 120
           VTIVELIKRRIVGLHQNTSIGSTDITDTWEPLEEGLLPLETTRHVSMIVITLSKKELN S
Sbjct: 96  VTIVELIKRRIVGLHQNTSIGSTDITDTWEPLEEGLLPLETTRHVSMIVITLSKKELNKS 155

Query: 121 SVGYQPPLPAELVKT---YDYEGEGSPHDQGPGRGRERDRNGRGRARGRGPPGNGYVTNE 180
           SVGYQPPLPAELVKT   YDYEGEGSPHDQGPGRGR R RNGRGR+RGRGPPGNG+V NE
Sbjct: 156 SVGYQPPLPAELVKTFVEYDYEGEGSPHDQGPGRGRGRGRNGRGRSRGRGPPGNGFVANE 215

Query: 181 YDDGDWDRNRGGNVRGRGRGRSGGNFRDRGRGGYNGPQYDFQQDGGYNQD-LPAQGRGRG 240
           YDDGDWDRNRGGN RGRGRGRSGGNFR RGRGGYNGPQ+D QQDGGYNQD LPAQGRGRG
Sbjct: 216 YDDGDWDRNRGGNGRGRGRGRSGGNFRGRGRGGYNGPQFDLQQDGGYNQDMLPAQGRGRG 275

Query: 241 RGRGGFRGRGRGFRTNGGPIQAAA 261
           RGRGG+RGRGRGFRTNGGPIQAAA
Sbjct: 276 RGRGGYRGRGRGFRTNGGPIQAAA 299

[Close]

BLAST of CmoCh01G020450 vs. ExPASy TrEMBL
Match: A0A6J1ILQ2 (ribonuclease P protein subunit p25-like protein isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111476415 PE=4 SV=1)

HSP 1 Score: 473.4 bits (1217), Expect = 6.1e-130
Identity = 245/263 (93.16%), Postives = 250/263 (95.06%), Query Frame = 0


Query: 1   MDRYHRVEKPRAETPIDENEIRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKT 60
           MDRYHRVEKPRAETPIDENEIRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKT
Sbjct: 1   MDRYHRVEKPRAETPIDENEIRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKT 60

Query: 61  VTIVELIKRRIVGLHQNTSIGSTDITDTWEPLEEGLLPLETTRHVSMIVITLSKKELNTS 120
           VTIVELIKRRIVGLHQNTSIGSTDITDTWEPLEEGLLPLETTRHVSMIVITLSKKELNTS
Sbjct: 61  VTIVELIKRRIVGLHQNTSIGSTDITDTWEPLEEGLLPLETTRHVSMIVITLSKKELNTS 120

Query: 121 SVGYQPPLPAELVKT---YDYEGEGSPHDQGPGRGRERDRNGRGRARGRGPPGNGYVTNE 180
           SVGYQPPLPAELVKT   YDYEGEGSPHDQGPGRGR R R+GRGR+RGRGPPGNG+V NE
Sbjct: 121 SVGYQPPLPAELVKTFVEYDYEGEGSPHDQGPGRGRGRGRSGRGRSRGRGPPGNGFVGNE 180

Query: 181 YDDGDWDRNRGGNVRGRGRGRSGGNFRDRGRGGYNGPQYDFQQDGGYNQDLPAQGRGRGR 240
           YDDGDWDRNRGGN RGR RGR GGNFR RGRGGYNGPQ+D QQDGGYNQD P QGRGRGR
Sbjct: 181 YDDGDWDRNRGGNGRGRVRGRGGGNFRGRGRGGYNGPQFDLQQDGGYNQDFPPQGRGRGR 240

Query: 241 GRGGFRGRGRGFRTNGGPIQAAA 261
           GRGG+RGRGRGFRTNGGPIQAAA
Sbjct: 241 GRGGYRGRGRGFRTNGGPIQAAA 263

[Close]

BLAST of CmoCh01G020450 vs. ExPASy TrEMBL
Match: A0A6J1IFA1 (ribonuclease P protein subunit p25-like protein isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111476415 PE=4 SV=1)

HSP 1 Score: 473.4 bits (1217), Expect = 6.1e-130
Identity = 245/263 (93.16%), Postives = 250/263 (95.06%), Query Frame = 0


Query: 1   MDRYHRVEKPRAETPIDENEIRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKT 60
           MDRYHRVEKPRAETPIDENEIRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKT
Sbjct: 9   MDRYHRVEKPRAETPIDENEIRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKT 68

Query: 61  VTIVELIKRRIVGLHQNTSIGSTDITDTWEPLEEGLLPLETTRHVSMIVITLSKKELNTS 120
           VTIVELIKRRIVGLHQNTSIGSTDITDTWEPLEEGLLPLETTRHVSMIVITLSKKELNTS
Sbjct: 69  VTIVELIKRRIVGLHQNTSIGSTDITDTWEPLEEGLLPLETTRHVSMIVITLSKKELNTS 128

Query: 121 SVGYQPPLPAELVKT---YDYEGEGSPHDQGPGRGRERDRNGRGRARGRGPPGNGYVTNE 180
           SVGYQPPLPAELVKT   YDYEGEGSPHDQGPGRGR R R+GRGR+RGRGPPGNG+V NE
Sbjct: 129 SVGYQPPLPAELVKTFVEYDYEGEGSPHDQGPGRGRGRGRSGRGRSRGRGPPGNGFVGNE 188

Query: 181 YDDGDWDRNRGGNVRGRGRGRSGGNFRDRGRGGYNGPQYDFQQDGGYNQDLPAQGRGRGR 240
           YDDGDWDRNRGGN RGR RGR GGNFR RGRGGYNGPQ+D QQDGGYNQD P QGRGRGR
Sbjct: 189 YDDGDWDRNRGGNGRGRVRGRGGGNFRGRGRGGYNGPQFDLQQDGGYNQDFPPQGRGRGR 248

Query: 241 GRGGFRGRGRGFRTNGGPIQAAA 261
           GRGG+RGRGRGFRTNGGPIQAAA
Sbjct: 249 GRGGYRGRGRGFRTNGGPIQAAA 271

[Close]

BLAST of CmoCh01G020450 vs. NCBI nr
Match: XP_022941062.1 (ribonuclease P protein subunit p25-like protein [Cucurbita moschata] >XP_022941063.1 ribonuclease P protein subunit p25-like protein [Cucurbita moschata] >XP_022941064.1 ribonuclease P protein subunit p25-like protein [Cucurbita moschata] >XP_022941065.1 ribonuclease P protein subunit p25-like protein [Cucurbita moschata] >XP_022941066.1 ribonuclease P protein subunit p25-like protein [Cucurbita moschata])

HSP 1 Score: 510.4 bits (1313), Expect = 9.3e-141
Identity = 260/260 (100.00%), Postives = 260/260 (100.00%), Query Frame = 0


Query: 1   MDRYHRVEKPRAETPIDENEIRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKT 60
           MDRYHRVEKPRAETPIDENEIRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKT
Sbjct: 1   MDRYHRVEKPRAETPIDENEIRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKT 60

Query: 61  VTIVELIKRRIVGLHQNTSIGSTDITDTWEPLEEGLLPLETTRHVSMIVITLSKKELNTS 120
           VTIVELIKRRIVGLHQNTSIGSTDITDTWEPLEEGLLPLETTRHVSMIVITLSKKELNTS
Sbjct: 61  VTIVELIKRRIVGLHQNTSIGSTDITDTWEPLEEGLLPLETTRHVSMIVITLSKKELNTS 120

Query: 121 SVGYQPPLPAELVKTYDYEGEGSPHDQGPGRGRERDRNGRGRARGRGPPGNGYVTNEYDD 180
           SVGYQPPLPAELVKTYDYEGEGSPHDQGPGRGRERDRNGRGRARGRGPPGNGYVTNEYDD
Sbjct: 121 SVGYQPPLPAELVKTYDYEGEGSPHDQGPGRGRERDRNGRGRARGRGPPGNGYVTNEYDD 180

Query: 181 GDWDRNRGGNVRGRGRGRSGGNFRDRGRGGYNGPQYDFQQDGGYNQDLPAQGRGRGRGRG 240
           GDWDRNRGGNVRGRGRGRSGGNFRDRGRGGYNGPQYDFQQDGGYNQDLPAQGRGRGRGRG
Sbjct: 181 GDWDRNRGGNVRGRGRGRSGGNFRDRGRGGYNGPQYDFQQDGGYNQDLPAQGRGRGRGRG 240

Query: 241 GFRGRGRGFRTNGGPIQAAA 261
           GFRGRGRGFRTNGGPIQAAA
Sbjct: 241 GFRGRGRGFRTNGGPIQAAA 260

[Close]

BLAST of CmoCh01G020450 vs. NCBI nr
Match: XP_023525730.1 (ribonuclease P protein subunit p25-like protein [Cucurbita pepo subsp. pepo] >XP_023525731.1 ribonuclease P protein subunit p25-like protein [Cucurbita pepo subsp. pepo] >XP_023525732.1 ribonuclease P protein subunit p25-like protein [Cucurbita pepo subsp. pepo] >KAG7037926.1 Ribonuclease P protein subunit p25-like protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 497.3 bits (1279), Expect = 8.1e-137
Identity = 257/263 (97.72%), Postives = 257/263 (97.72%), Query Frame = 0


Query: 1   MDRYHRVEKPRAETPIDENEIRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKT 60
           MDRYHRVEKPRAETPIDENEIRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKT
Sbjct: 1   MDRYHRVEKPRAETPIDENEIRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKT 60

Query: 61  VTIVELIKRRIVGLHQNTSIGSTDITDTWEPLEEGLLPLETTRHVSMIVITLSKKELNTS 120
           VTIVELIKRRIVGLHQNTSIGSTDITDTWEPLEEGLLPLETTRHVSMIVITLSKKELNTS
Sbjct: 61  VTIVELIKRRIVGLHQNTSIGSTDITDTWEPLEEGLLPLETTRHVSMIVITLSKKELNTS 120

Query: 121 SVGYQPPLPAELVKT---YDYEGEGSPHDQGPGRGRERDRNGRGRARGRGPPGNGYVTNE 180
           SVGYQPPLPAELVKT   YDYEGEGSPHDQGPGRGRER RNGRGRARGRGPPGNGYVTNE
Sbjct: 121 SVGYQPPLPAELVKTYVEYDYEGEGSPHDQGPGRGRERGRNGRGRARGRGPPGNGYVTNE 180

Query: 181 YDDGDWDRNRGGNVRGRGRGRSGGNFRDRGRGGYNGPQYDFQQDGGYNQDLPAQGRGRGR 240
           YDDGDWDRNRGGNVRGRGRGRSGGNFR RGRGGYNGPQYD QQDGGYNQDLPAQGRGRGR
Sbjct: 181 YDDGDWDRNRGGNVRGRGRGRSGGNFRGRGRGGYNGPQYDLQQDGGYNQDLPAQGRGRGR 240

Query: 241 GRGGFRGRGRGFRTNGGPIQAAA 261
           GRGGFRGRGRGFRTNGGPIQAAA
Sbjct: 241 GRGGFRGRGRGFRTNGGPIQAAA 263

[Close]

BLAST of CmoCh01G020450 vs. NCBI nr
Match: KAG6608609.1 (Ribonuclease P protein subunit p25-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 497.3 bits (1279), Expect = 8.1e-137
Identity = 257/263 (97.72%), Postives = 257/263 (97.72%), Query Frame = 0


Query: 1   MDRYHRVEKPRAETPIDENEIRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKT 60
           MDRYHRVEKPRAETPIDENEIRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKT
Sbjct: 49  MDRYHRVEKPRAETPIDENEIRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKT 108

Query: 61  VTIVELIKRRIVGLHQNTSIGSTDITDTWEPLEEGLLPLETTRHVSMIVITLSKKELNTS 120
           VTIVELIKRRIVGLHQNTSIGSTDITDTWEPLEEGLLPLETTRHVSMIVITLSKKELNTS
Sbjct: 109 VTIVELIKRRIVGLHQNTSIGSTDITDTWEPLEEGLLPLETTRHVSMIVITLSKKELNTS 168

Query: 121 SVGYQPPLPAELVKT---YDYEGEGSPHDQGPGRGRERDRNGRGRARGRGPPGNGYVTNE 180
           SVGYQPPLPAELVKT   YDYEGEGSPHDQGPGRGRER RNGRGRARGRGPPGNGYVTNE
Sbjct: 169 SVGYQPPLPAELVKTYVEYDYEGEGSPHDQGPGRGRERGRNGRGRARGRGPPGNGYVTNE 228

Query: 181 YDDGDWDRNRGGNVRGRGRGRSGGNFRDRGRGGYNGPQYDFQQDGGYNQDLPAQGRGRGR 240
           YDDGDWDRNRGGNVRGRGRGRSGGNFR RGRGGYNGPQYD QQDGGYNQDLPAQGRGRGR
Sbjct: 229 YDDGDWDRNRGGNVRGRGRGRSGGNFRGRGRGGYNGPQYDLQQDGGYNQDLPAQGRGRGR 288

Query: 241 GRGGFRGRGRGFRTNGGPIQAAA 261
           GRGGFRGRGRGFRTNGGPIQAAA
Sbjct: 289 GRGGFRGRGRGFRTNGGPIQAAA 311

[Close]

BLAST of CmoCh01G020450 vs. NCBI nr
Match: XP_022982024.1 (ribonuclease P protein subunit p25-like protein [Cucurbita maxima] >XP_022982025.1 ribonuclease P protein subunit p25-like protein [Cucurbita maxima] >XP_022982026.1 ribonuclease P protein subunit p25-like protein [Cucurbita maxima] >XP_022982027.1 ribonuclease P protein subunit p25-like protein [Cucurbita maxima] >XP_022982028.1 ribonuclease P protein subunit p25-like protein [Cucurbita maxima])

HSP 1 Score: 492.7 bits (1267), Expect = 2.0e-135
Identity = 255/263 (96.96%), Postives = 256/263 (97.34%), Query Frame = 0


Query: 1   MDRYHRVEKPRAETPIDENEIRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKT 60
           MDRYHRVEKPRAETPIDENEIRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKT
Sbjct: 1   MDRYHRVEKPRAETPIDENEIRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKT 60

Query: 61  VTIVELIKRRIVGLHQNTSIGSTDITDTWEPLEEGLLPLETTRHVSMIVITLSKKELNTS 120
           VTIVELIKRRIVGLHQNTSIGSTDITDTWEPLEEGLLPLETTRHVSMIVITLSKKELNTS
Sbjct: 61  VTIVELIKRRIVGLHQNTSIGSTDITDTWEPLEEGLLPLETTRHVSMIVITLSKKELNTS 120

Query: 121 SVGYQPPLPAELVKT---YDYEGEGSPHDQGPGRGRERDRNGRGRARGRGPPGNGYVTNE 180
           SVGYQPPLPAELVKT   YDYEGEGSPHD GPGRGRER RNGRGRARGRGPPGNGYVTNE
Sbjct: 121 SVGYQPPLPAELVKTYVEYDYEGEGSPHDLGPGRGRERGRNGRGRARGRGPPGNGYVTNE 180

Query: 181 YDDGDWDRNRGGNVRGRGRGRSGGNFRDRGRGGYNGPQYDFQQDGGYNQDLPAQGRGRGR 240
           YDDGDWDRNRGGNVRGRGRGRSGGNFR RGRGGYNGPQYD QQDGGYNQDLPAQGRGRGR
Sbjct: 181 YDDGDWDRNRGGNVRGRGRGRSGGNFRGRGRGGYNGPQYDLQQDGGYNQDLPAQGRGRGR 240

Query: 241 GRGGFRGRGRGFRTNGGPIQAAA 261
           GRGGFRGRGRGFRT+GGPIQAAA
Sbjct: 241 GRGGFRGRGRGFRTSGGPIQAAA 263

[Close]

BLAST of CmoCh01G020450 vs. NCBI nr
Match: XP_038900199.1 (ribonuclease P protein subunit p25-like protein isoform X1 [Benincasa hispida])

HSP 1 Score: 482.3 bits (1240), Expect = 2.7e-132
Identity = 249/263 (94.68%), Postives = 253/263 (96.20%), Query Frame = 0


Query: 1   MDRYHRVEKPRAETPIDENEIRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKT 60
           MDRYHRVEKPRAETPIDENEIRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKT
Sbjct: 1   MDRYHRVEKPRAETPIDENEIRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKT 60

Query: 61  VTIVELIKRRIVGLHQNTSIGSTDITDTWEPLEEGLLPLETTRHVSMIVITLSKKELNTS 120
           VTIVELIKRRIVGLHQNTSIGSTDITDTWEPLEEGLLPLETTRHVSMIVITLSKKELN S
Sbjct: 61  VTIVELIKRRIVGLHQNTSIGSTDITDTWEPLEEGLLPLETTRHVSMIVITLSKKELNKS 120

Query: 121 SVGYQPPLPAELVKT---YDYEGEGSPHDQGPGRGRERDRNGRGRARGRGPPGNGYVTNE 180
           SVGYQPPLPAELVKT   YDYEGEGSPHDQGPGRGR R RNGRGR+RGRGPPGNG+V NE
Sbjct: 121 SVGYQPPLPAELVKTFVEYDYEGEGSPHDQGPGRGRGRGRNGRGRSRGRGPPGNGFVANE 180

Query: 181 YDDGDWDRNRGGNVRGRGRGRSGGNFRDRGRGGYNGPQYDFQQDGGYNQDLPAQGRGRGR 240
           YDDGDWDRNRGGN RGRGRGRSGGNFR RGRGGYNGPQ+D QQDGGYNQDLPAQGRGRGR
Sbjct: 181 YDDGDWDRNRGGNGRGRGRGRSGGNFRGRGRGGYNGPQFDLQQDGGYNQDLPAQGRGRGR 240

Query: 241 GRGGFRGRGRGFRTNGGPIQAAA 261
           GRGG+RGRGRGFRTNGGPIQAAA
Sbjct: 241 GRGGYRGRGRGFRTNGGPIQAAA 263

[Close]

BLAST of CmoCh01G020450 vs. TAIR 10
Match: AT1G76010.1 (Alba DNA/RNA-binding protein )

HSP 1 Score: 304.7 bits (779), Expect = 7.2e-83
Identity = 186/265 (70.19%), Postives = 202/265 (76.23%), Query Frame = 0


Query: 1   MDRYHRVEKPRAETPIDENEIRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKT 60
           MD+Y RV KP+A+TPID NEIRITSQGR RNYITYAMTLLQ+KGS E+VFKAMGRAINKT
Sbjct: 1   MDKYQRVVKPKADTPIDANEIRITSQGRARNYITYAMTLLQDKGSTEVVFKAMGRAINKT 60

Query: 61  VTIVELIKRRIVGLHQNTSIGSTDITDTWEPLEEGLLPLETTRHVSMIVITLSKKELNTS 120
           VTIVELIKRRI  LHQNTSIGSTDITDTWEP EEGLLPLETTRHVSMI ITLSK ELNTS
Sbjct: 61  VTIVELIKRRIPDLHQNTSIGSTDITDTWEPTEEGLLPLETTRHVSMITITLSKIELNTS 120

Query: 121 SVGYQPPLPAELVK---TYDYEG-EGSPHDQGPGRGRERDRNGRGRARGRGPPGNGYVTN 180
           SVGYQ P+P ELVK     DYEG EGSP  +G GRGR     GRGR RGRG  GN YV  
Sbjct: 121 SVGYQCPIPIELVKPMGDIDYEGREGSPGGRGRGRGR-----GRGRGRGRGGRGNAYVNV 180

Query: 181 EYDDGDWDRNRG-GNVRGRGRGRSGGNFRDRGRGGYNGP--QYDFQQDGGYNQDLPAQGR 240
           E++DG W+R +  G  RGRGRGRS    R RGRGGYNGP  +YD  QDGGY  D P + R
Sbjct: 181 EHEDGGWEREQSYGRGRGRGRGRSS---RGRGRGGYNGPPNEYDAPQDGGYGYDAPHEHR 240

Query: 241 G---RG------RGRGGFRG-RGRG 249
           G   RG      +GRGG+ G +GRG
Sbjct: 241 GYDDRGGYDAPPQGRGGYDGPQGRG 257

[Close]

BLAST of CmoCh01G020450 vs. TAIR 10
Match: AT1G20220.1 (Alba DNA/RNA-binding protein )

HSP 1 Score: 292.4 bits (747), Expect = 3.7e-79
Identity = 196/319 (61.44%), Postives = 211/319 (66.14%), Query Frame = 0


Query: 1   MDRYHRVEKPRAETPIDENEIRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKT 60
           MD+Y RVEKP+A+TPI ENEIRITS GR RNYITYAM LLQE  SNE++FKAMGRAINK+
Sbjct: 1   MDKYQRVEKPKADTPIAENEIRITSMGRARNYITYAMALLQENKSNEVIFKAMGRAINKS 60

Query: 61  VTIVELIKRRIVGLHQNTSIGSTDITDTWEPLEEGLLPLETTRHVSMIVITLSKKELNTS 120
           VTIVELIKRRI GLHQ TSIGSTDITDTWEP EEGL  +ETTRHVSMI ITLSK++LNTS
Sbjct: 61  VTIVELIKRRIPGLHQITSIGSTDITDTWEPTEEGLQTIETTRHVSMITITLSKEQLNTS 120

Query: 121 SVGYQPPLPAELVK---TYDYEG-EGSPHDQG-----PGRGRERDRNGRGR--------- 180
           SVGYQ P+P E+VK     DYEG +GSP  +G      GRGR R R GRG          
Sbjct: 121 SVGYQCPIPIEMVKPLAEIDYEGQDGSPRGRGGRRGRGGRGRGRGRGGRGNGPANVEYDD 180

Query: 181 -ARGRGPPGNGYVTNEYDDGDWDRNRGGN--------------------VRGRGRGRSGG 240
             RGRG  GNGYV NEYDDG   R RGG                      RGRGRGR GG
Sbjct: 181 GGRGRGGRGNGYVNNEYDDG--GRGRGGRGSGYVNNEYNDGGMEQDRSYGRGRGRGRGGG 240

Query: 241 NFRDRGRGGYNG---PQYDFQQDG---GYN----------QDLPAQGRGRGRGRGGFRGR 261
               RGRGGYNG   P Y+ QQDG   GYN             P QGRGRGRGRGG RGR
Sbjct: 241 R-GGRGRGGYNGPPPPYYEAQQDGGDYGYNNVAPPADHGYDGPPPQGRGRGRGRGG-RGR 300

[Close]

BLAST of CmoCh01G020450 vs. TAIR 10
Match: AT3G07030.1 (Alba DNA/RNA-binding protein )

HSP 1 Score: 146.0 bits (367), Expect = 4.3e-35
Identity = 119/278 (42.81%), Postives = 149/278 (53.60%), Query Frame = 0


Query: 1   MDRYHRVEKPRAETPIDENEIRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKT 60
           MDRY RV KP+ E+PI+ENEIRITS+G +RNYI+YA +LLQEK   +IV KAMG+AI+KT
Sbjct: 1   MDRYQRVAKPKPESPINENEIRITSKGLIRNYISYATSLLQEKSVKDIVLKAMGQAISKT 60

Query: 61  VTIVELIKRRIVGLHQNTSIGSTDITDTWEPLEEGLLPLETTRHVSMIVITLSKKELNTS 120
           V I E++K +I GLHQ+ +I S  ITD WEP EEGL P+E TRHVSMI ITLS  ELN  
Sbjct: 61  VAISEILKNKIPGLHQDIAISSISITDVWEPTEEGLFPVELTRHVSMISITLSLSELNKD 120

Query: 121 SVGYQPPLPAELVK----------------TYDYEGE-------GSPHDQGPGRGRERDR 180
           S GYQ P  ++  K                 Y  EGE       G   D    +G  +++
Sbjct: 121 SPGYQAPAQSDQSKPQYQPQQGRQARLPYNAYGEEGEVVAEGEAGEEVDMETTKGVMKEK 180

Query: 181 NGRGRARGRGPPGNGYVTNEYDDGDWDRNRGGNVRGRGRGRSGGNFRDRGRGGYNGPQYD 240
             +G  +         +    +  D        V GRG G  GG  RD G GG     Y 
Sbjct: 181 T-KGTIKKIIKTMKVGIQTRAEAVDVVDEAMAIVGGRG-GYGGG--RDGGYGGGRDDGYG 240

Query: 241 FQQDGGYNQDL-PAQGRGRGRGRGGFRGRGRGFRTNGG 255
            +++ GY +      G GR  G GG R  G G   N G
Sbjct: 241 ERRNDGYGERRNDRYGGGRDDGYGGGRDDGYGGGRNDG 274

The following BLAST results are available for this feature:

BLAST of CmoCh01G020450 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q99JH1	1.3e-15	34.56	Ribonuclease P protein subunit p25-like protein OS=Mus musculus OX=10090 GN=Rpp2...	[more]
Q8N5L8	3.7e-15	35.83	Ribonuclease P protein subunit p25-like protein OS=Homo sapiens OX=9606 GN=RPP25...	[more]
Q2KIR4	4.5e-13	31.85	Ribonuclease P protein subunit p25-like protein OS=Bos taurus OX=9913 GN=RPP25L ...	[more]
Q91WE3	1.0e-12	33.33	Ribonuclease P protein subunit p25 OS=Mus musculus OX=10090 GN=Rpp25 PE=2 SV=1	[more]
Q5PPN2	1.0e-12	33.33	Ribonuclease P protein subunit p25 OS=Rattus norvegicus OX=10116 GN=Rpp25 PE=2 S...	[more]

BLAST of CmoCh01G020450 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FSH3	4.5e-141	100.00	ribonuclease P protein subunit p25-like protein OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1J1F5	9.7e-136	96.96	ribonuclease P protein subunit p25-like protein OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A0A0LJ75	3.2e-131	94.32	Alba domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G874340 PE=4 S...	[more]
A0A6J1ILQ2	6.1e-130	93.16	ribonuclease P protein subunit p25-like protein isoform X2 OS=Cucurbita maxima O...	[more]
A0A6J1IFA1	6.1e-130	93.16	ribonuclease P protein subunit p25-like protein isoform X1 OS=Cucurbita maxima O...	[more]

BLAST of CmoCh01G020450 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022941062.1	9.3e-141	100.00	ribonuclease P protein subunit p25-like protein [Cucurbita moschata] >XP_0229410...	[more]
XP_023525730.1	8.1e-137	97.72	ribonuclease P protein subunit p25-like protein [Cucurbita pepo subsp. pepo] >XP...	[more]
KAG6608609.1	8.1e-137	97.72	Ribonuclease P protein subunit p25-like protein, partial [Cucurbita argyrosperma...	[more]
XP_022982024.1	2.0e-135	96.96	ribonuclease P protein subunit p25-like protein [Cucurbita maxima] >XP_022982025...	[more]
XP_038900199.1	2.7e-132	94.68	ribonuclease P protein subunit p25-like protein isoform X1 [Benincasa hispida]	[more]

BLAST of CmoCh01G020450 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G76010.1	7.2e-83	70.19	Alba DNA/RNA-binding protein	[more]
AT1G20220.1	3.7e-79	61.44	Alba DNA/RNA-binding protein	[more]
AT3G07030.1	4.3e-35	42.81	Alba DNA/RNA-binding protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002775	DNA/RNA-binding protein Alba-like	PFAM	PF01918	Alba	coord: 19..83 e-value: 5.5E-20 score: 71.0
IPR036882	Alba-like domain superfamily	GENE3D	3.30.110.20		coord: 14..118 e-value: 3.3E-35 score: 122.0
IPR036882	Alba-like domain superfamily	SUPERFAMILY	82704	AlbA-like	coord: 16..129
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 138..260
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 138..163
None	No IPR available	PANTHER	PTHR13516:SF14	ALBA DNA/RNA-BINDING PROTEIN	coord: 1..253
None	No IPR available	PANTHER	PTHR13516	RIBONUCLEASE P SUBUNIT P25	coord: 1..253

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh01G020450.1	CmoCh01G020450.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding