CmoCh01G020220 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh01G020220
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	auxin-responsive protein SAUR50-like
Location	Cmo_Chr01: 14218591 .. 14218908 (-)
RNA-Seq Expression	CmoCh01G020220
Synteny	CmoCh01G020220

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCATCAGAAAGTCCACCAAAATGCCACAGACCGCAGTGCTGAAGCAGATGCTGAAGCGCTGCTCTAGCTTGGGGAAGAAGCAGCAGCAGTACGACGAACAGGGCCTCCCTTTGGACGTCCCCAAGGGCCATTTCGTGGTGTACGTAGGAGAAAATCGAAGCAGACACATTGTCCCCATCACATATTTGAATCACCCACAGTTCCAAATCTTGCTCCAGCAAGCAGCTGATGAATTTGGGTTCGATCATGACATGGGCCTCACCATTCCCTGCGATGAGCACTTCTTTCAGTCCCTAACTTCCACCCTTCGATGA

mRNA sequence

ATGGCCATCAGAAAGTCCACCAAAATGCCACAGACCGCAGTGCTGAAGCAGATGCTGAAGCGCTGCTCTAGCTTGGGGAAGAAGCAGCAGCAGTACGACGAACAGGGCCTCCCTTTGGACGTCCCCAAGGGCCATTTCGTGGTGTACGTAGGAGAAAATCGAAGCAGACACATTGTCCCCATCACATATTTGAATCACCCACAGTTCCAAATCTTGCTCCAGCAAGCAGCTGATGAATTTGGGTTCGATCATGACATGGGCCTCACCATTCCCTGCGATGAGCACTTCTTTCAGTCCCTAACTTCCACCCTTCGATGA

Coding sequence (CDS)

ATGGCCATCAGAAAGTCCACCAAAATGCCACAGACCGCAGTGCTGAAGCAGATGCTGAAGCGCTGCTCTAGCTTGGGGAAGAAGCAGCAGCAGTACGACGAACAGGGCCTCCCTTTGGACGTCCCCAAGGGCCATTTCGTGGTGTACGTAGGAGAAAATCGAAGCAGACACATTGTCCCCATCACATATTTGAATCACCCACAGTTCCAAATCTTGCTCCAGCAAGCAGCTGATGAATTTGGGTTCGATCATGACATGGGCCTCACCATTCCCTGCGATGAGCACTTCTTTCAGTCCCTAACTTCCACCCTTCGATGA

Protein sequence

MAIRKSTKMPQTAVLKQMLKRCSSLGKKQQQYDEQGLPLDVPKGHFVVYVGENRSRHIVPITYLNHPQFQILLQQAADEFGFDHDMGLTIPCDEHFFQSLTSTLR

Homology

[Close]

BLAST of CmoCh01G020220 vs. ExPASy Swiss-Prot
Match: O65695 (Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana OX=3702 GN=SAUR50 PE=1 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 3.1e-37
Identity = 75/104 (72.12%), Postives = 90/104 (86.54%), Query Frame = 0


Query: 3   IRKSTKMPQTAVLKQMLKRCSSLGKKQ-QQYDEQGLPLDVPKGHFVVYVGENRSRHIVPI 62
           ++K++K+ QTA+LKQ+LKRCSSLGKK    YDE  LPLDVPKGHF VYVGENRSR+IVPI
Sbjct: 4   MKKTSKLTQTAMLKQILKRCSSLGKKNGGGYDEDCLPLDVPKGHFPVYVGENRSRYIVPI 63

Query: 63  TYLNHPQFQILLQQAADEFGFDHDMGLTIPCDEHFFQSLTSTLR 106
           ++L HP+FQ LLQ+A +EFGFDHDMGLTIPCDE  FQ+LTS +R
Sbjct: 64  SFLTHPEFQSLLQRAEEEFGFDHDMGLTIPCDELVFQTLTSMIR 107

[Close]

BLAST of CmoCh01G020220 vs. ExPASy Swiss-Prot
Match: Q9SL45 (Protein SMALL AUXIN UP-REGULATED RNA 10 OS=Arabidopsis thaliana OX=3702 GN=SAUR10 PE=2 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 6.9e-29
Identity = 67/112 (59.82%), Postives = 82/112 (73.21%), Query Frame = 0


Query: 1   MAIRKSTK--MPQTAVLKQMLKRCSSLGKKQQ-----QYDEQGLPLDVPKGHFVVYVGEN 60
           MAI++S+K    Q A +KQ++KRCSSL K +         E  LP DVPKGHF VYVG N
Sbjct: 1   MAIKRSSKATSSQAASIKQIVKRCSSLRKMKNVNGCYYNQEDDLPQDVPKGHFPVYVGPN 60

Query: 61  RSRHIVPITYLNHPQFQILLQQAADEFGFDHDMGLTIPCDEHFFQSLTSTLR 106
           RSR+IVPI++L+H +FQ LL+ A +EFGFDHDMGLTIPCDE FF+SL S  R
Sbjct: 61  RSRYIVPISWLHHSEFQTLLRLAEEEFGFDHDMGLTIPCDEVFFRSLISMFR 112

[Close]

BLAST of CmoCh01G020220 vs. ExPASy Swiss-Prot
Match: P0DKL1 (Auxin-responsive protein SAUR50 OS=Helianthus annuus OX=4232 PE=3 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 4.9e-27
Identity = 59/102 (57.84%), Postives = 75/102 (73.53%), Query Frame = 0


Query: 3   IRKSTKMPQTAVLKQMLKRCSSLGKKQQQYDEQGLPLDVPKGHFVVYVGENRSRHIVPIT 62
           IRKS K  Q   +K+++K+CSS GK     D+ GLP DVPKGHFVVYVGE R+R+IVPI+
Sbjct: 4   IRKSHKQTQALAIKKIIKKCSSFGKNN---DDSGLPNDVPKGHFVVYVGERRNRYIVPIS 63

Query: 63  YLNHPQFQILLQQAADEFGFDHDMGLTIPCDEHFFQSLTSTL 105
            L+HP FQ LLQ++ +EFGF+HDMG+ IPC E  F S  S +
Sbjct: 64  CLDHPTFQDLLQRSEEEFGFNHDMGIIIPCQEVDFLSFFSMI 102

[Close]

BLAST of CmoCh01G020220 vs. ExPASy Swiss-Prot
Match: P32295 (Indole-3-acetic acid-induced protein ARG7 OS=Vigna radiata var. radiata OX=3916 GN=ARG7 PE=2 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 2.7e-17
Identity = 40/67 (59.70%), Postives = 49/67 (73.13%), Query Frame = 0


Query: 39  LDVPKGHFVVYVGENRSRHIVPITYLNHPQFQILLQQAADEFGFDHDM-GLTIPCDEHFF 98
           LD PKG+  VYVGEN  R ++P+++LN P FQ LL QA +EFG+DH M GLTIPC E  F
Sbjct: 23  LDAPKGYLAVYVGENMKRFVIPVSHLNQPLFQDLLSQAEEEFGYDHPMGGLTIPCSEDLF 82

Query: 99  QSLTSTL 105
           Q +TS L
Sbjct: 83  QHITSCL 89

[Close]

BLAST of CmoCh01G020220 vs. ExPASy Swiss-Prot
Match: P33081 (Auxin-induced protein 15A OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 1.0e-16
Identity = 39/66 (59.09%), Postives = 47/66 (71.21%), Query Frame = 0


Query: 40  DVPKGHFVVYVGENRSRHIVPITYLNHPQFQILLQQAADEFGFDHDM-GLTIPCDEHFFQ 99
           D PKG+  VYVGE   R ++P++YLN P FQ LL QA +EFG+DH M GLTIPC E  FQ
Sbjct: 16  DAPKGYLAVYVGEKLKRFVIPVSYLNQPSFQDLLSQAEEEFGYDHPMGGLTIPCSEDVFQ 75

Query: 100 SLTSTL 105
            +TS L
Sbjct: 76  CITSCL 81

[Close]

BLAST of CmoCh01G020220 vs. ExPASy TrEMBL
Match: A0A6J1J0M7 (auxin-responsive protein SAUR50-like OS=Cucurbita maxima OX=3661 GN=LOC111480219 PE=3 SV=1)

HSP 1 Score: 218.0 bits (554), Expect = 1.9e-53
Identity = 105/105 (100.00%), Postives = 105/105 (100.00%), Query Frame = 0


Query: 1   MAIRKSTKMPQTAVLKQMLKRCSSLGKKQQQYDEQGLPLDVPKGHFVVYVGENRSRHIVP 60
           MAIRKSTKMPQTAVLKQMLKRCSSLGKKQQQYDEQGLPLDVPKGHFVVYVGENRSRHIVP
Sbjct: 1   MAIRKSTKMPQTAVLKQMLKRCSSLGKKQQQYDEQGLPLDVPKGHFVVYVGENRSRHIVP 60

Query: 61  ITYLNHPQFQILLQQAADEFGFDHDMGLTIPCDEHFFQSLTSTLR 106
           ITYLNHPQFQILLQQAADEFGFDHDMGLTIPCDEHFFQSLTSTLR
Sbjct: 61  ITYLNHPQFQILLQQAADEFGFDHDMGLTIPCDEHFFQSLTSTLR 105

[Close]

BLAST of CmoCh01G020220 vs. ExPASy TrEMBL
Match: A0A6J1FKC5 (auxin-responsive protein SAUR50-like OS=Cucurbita moschata OX=3662 GN=LOC111446542 PE=3 SV=1)

HSP 1 Score: 218.0 bits (554), Expect = 1.9e-53
Identity = 105/105 (100.00%), Postives = 105/105 (100.00%), Query Frame = 0


Query: 1   MAIRKSTKMPQTAVLKQMLKRCSSLGKKQQQYDEQGLPLDVPKGHFVVYVGENRSRHIVP 60
           MAIRKSTKMPQTAVLKQMLKRCSSLGKKQQQYDEQGLPLDVPKGHFVVYVGENRSRHIVP
Sbjct: 1   MAIRKSTKMPQTAVLKQMLKRCSSLGKKQQQYDEQGLPLDVPKGHFVVYVGENRSRHIVP 60

Query: 61  ITYLNHPQFQILLQQAADEFGFDHDMGLTIPCDEHFFQSLTSTLR 106
           ITYLNHPQFQILLQQAADEFGFDHDMGLTIPCDEHFFQSLTSTLR
Sbjct: 61  ITYLNHPQFQILLQQAADEFGFDHDMGLTIPCDEHFFQSLTSTLR 105

[Close]

BLAST of CmoCh01G020220 vs. ExPASy TrEMBL
Match: A0A6J1IE85 (auxin-responsive protein SAUR50-like OS=Cucurbita maxima OX=3661 GN=LOC111476445 PE=3 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 3.0e-43
Identity = 89/101 (88.12%), Postives = 95/101 (94.06%), Query Frame = 0


Query: 7   TKMPQTAVLKQMLKRCSSLGKKQQQY--DEQGLPLDVPKGHFVVYVGENRSRHIVPITYL 66
           TKMPQTAVLKQM+KRCSS+G+KQ Q+  D  GLPLDVPKGHFVVYVGENRSR+IVPIT+L
Sbjct: 4   TKMPQTAVLKQMIKRCSSMGRKQHQHYDDLAGLPLDVPKGHFVVYVGENRSRYIVPITFL 63

Query: 67  NHPQFQILLQQAADEFGFDHDMGLTIPCDEHFFQSLTSTLR 106
           NHPQFQILLQQAADEFGFDHDMGLTIPCDEH FQSLTSTLR
Sbjct: 64  NHPQFQILLQQAADEFGFDHDMGLTIPCDEHSFQSLTSTLR 104

[Close]

BLAST of CmoCh01G020220 vs. ExPASy TrEMBL
Match: A0A6J1F9Z6 (auxin-responsive protein SAUR50-like OS=Cucurbita moschata OX=3662 GN=LOC111443449 PE=3 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 3.0e-43
Identity = 89/101 (88.12%), Postives = 95/101 (94.06%), Query Frame = 0


Query: 7   TKMPQTAVLKQMLKRCSSLGKKQQQY--DEQGLPLDVPKGHFVVYVGENRSRHIVPITYL 66
           TKMPQTAVLKQM+KRCSS+G+KQ Q+  D  GLPLDVPKGHFVVYVGENRSR+IVPIT+L
Sbjct: 4   TKMPQTAVLKQMIKRCSSMGRKQHQHYDDLAGLPLDVPKGHFVVYVGENRSRYIVPITFL 63

Query: 67  NHPQFQILLQQAADEFGFDHDMGLTIPCDEHFFQSLTSTLR 106
           NHPQFQILLQQAADEFGFDHDMGLTIPCDEH FQSLTSTLR
Sbjct: 64  NHPQFQILLQQAADEFGFDHDMGLTIPCDEHSFQSLTSTLR 104

[Close]

BLAST of CmoCh01G020220 vs. ExPASy TrEMBL
Match: W9RZ83 (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_016032 PE=3 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 3.3e-42
Identity = 86/105 (81.90%), Postives = 95/105 (90.48%), Query Frame = 0


Query: 1   MAIRKSTKMPQTAVLKQMLKRCSSLGKKQQQYDEQGLPLDVPKGHFVVYVGENRSRHIVP 60
           MAIRKS ++PQTAVLKQ+LKRCSSLGKKQQ YDEQGLPLDVPKGHFVVYVGENRSR+IVP
Sbjct: 1   MAIRKSNRLPQTAVLKQILKRCSSLGKKQQDYDEQGLPLDVPKGHFVVYVGENRSRYIVP 60

Query: 61  ITYLNHPQFQILLQQAADEFGFDHDMGLTIPCDEHFFQSLTSTLR 106
           I++L  P+FQ LLQQA +EFGFDHDMGLTIPC+E  F SLTS LR
Sbjct: 61  ISFLTRPEFQTLLQQAEEEFGFDHDMGLTIPCEEEVFLSLTSMLR 105

[Close]

BLAST of CmoCh01G020220 vs. NCBI nr
Match: XP_022941161.1 (auxin-responsive protein SAUR50-like [Cucurbita moschata] >XP_022980903.1 auxin-responsive protein SAUR50-like [Cucurbita maxima] >XP_023525369.1 auxin-responsive protein SAUR50-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 218.0 bits (554), Expect = 3.9e-53
Identity = 105/105 (100.00%), Postives = 105/105 (100.00%), Query Frame = 0


Query: 1   MAIRKSTKMPQTAVLKQMLKRCSSLGKKQQQYDEQGLPLDVPKGHFVVYVGENRSRHIVP 60
           MAIRKSTKMPQTAVLKQMLKRCSSLGKKQQQYDEQGLPLDVPKGHFVVYVGENRSRHIVP
Sbjct: 1   MAIRKSTKMPQTAVLKQMLKRCSSLGKKQQQYDEQGLPLDVPKGHFVVYVGENRSRHIVP 60

Query: 61  ITYLNHPQFQILLQQAADEFGFDHDMGLTIPCDEHFFQSLTSTLR 106
           ITYLNHPQFQILLQQAADEFGFDHDMGLTIPCDEHFFQSLTSTLR
Sbjct: 61  ITYLNHPQFQILLQQAADEFGFDHDMGLTIPCDEHFFQSLTSTLR 105

[Close]

BLAST of CmoCh01G020220 vs. NCBI nr
Match: KAG6608586.1 (Auxin-responsive protein SAUR50, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 216.5 bits (550), Expect = 1.1e-52
Identity = 104/105 (99.05%), Postives = 104/105 (99.05%), Query Frame = 0


Query: 1   MAIRKSTKMPQTAVLKQMLKRCSSLGKKQQQYDEQGLPLDVPKGHFVVYVGENRSRHIVP 60
           M IRKSTKMPQTAVLKQMLKRCSSLGKKQQQYDEQGLPLDVPKGHFVVYVGENRSRHIVP
Sbjct: 1   MGIRKSTKMPQTAVLKQMLKRCSSLGKKQQQYDEQGLPLDVPKGHFVVYVGENRSRHIVP 60

Query: 61  ITYLNHPQFQILLQQAADEFGFDHDMGLTIPCDEHFFQSLTSTLR 106
           ITYLNHPQFQILLQQAADEFGFDHDMGLTIPCDEHFFQSLTSTLR
Sbjct: 61  ITYLNHPQFQILLQQAADEFGFDHDMGLTIPCDEHFFQSLTSTLR 105

[Close]

BLAST of CmoCh01G020220 vs. NCBI nr
Match: XP_022937029.1 (auxin-responsive protein SAUR50-like [Cucurbita moschata] >XP_022975872.1 auxin-responsive protein SAUR50-like [Cucurbita maxima] >KAG6591277.1 Auxin-responsive protein SAUR50, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 184.1 bits (466), Expect = 6.2e-43
Identity = 89/101 (88.12%), Postives = 95/101 (94.06%), Query Frame = 0


Query: 7   TKMPQTAVLKQMLKRCSSLGKKQQQY--DEQGLPLDVPKGHFVVYVGENRSRHIVPITYL 66
           TKMPQTAVLKQM+KRCSS+G+KQ Q+  D  GLPLDVPKGHFVVYVGENRSR+IVPIT+L
Sbjct: 4   TKMPQTAVLKQMIKRCSSMGRKQHQHYDDLAGLPLDVPKGHFVVYVGENRSRYIVPITFL 63

Query: 67  NHPQFQILLQQAADEFGFDHDMGLTIPCDEHFFQSLTSTLR 106
           NHPQFQILLQQAADEFGFDHDMGLTIPCDEH FQSLTSTLR
Sbjct: 64  NHPQFQILLQQAADEFGFDHDMGLTIPCDEHSFQSLTSTLR 104

[Close]

BLAST of CmoCh01G020220 vs. NCBI nr
Match: XP_023535895.1 (auxin-responsive protein SAUR50-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 182.2 bits (461), Expect = 2.3e-42
Identity = 88/101 (87.13%), Postives = 94/101 (93.07%), Query Frame = 0


Query: 7   TKMPQTAVLKQMLKRCSSLGKKQQQY--DEQGLPLDVPKGHFVVYVGENRSRHIVPITYL 66
           TKMPQTAVLKQM+KRCSS+G+KQ  +  D  GLPLDVPKGHFVVYVGENRSR+IVPIT+L
Sbjct: 4   TKMPQTAVLKQMIKRCSSMGRKQHHHYDDLAGLPLDVPKGHFVVYVGENRSRYIVPITFL 63

Query: 67  NHPQFQILLQQAADEFGFDHDMGLTIPCDEHFFQSLTSTLR 106
           NHPQFQILLQQAADEFGFDHDMGLTIPCDEH FQSLTSTLR
Sbjct: 64  NHPQFQILLQQAADEFGFDHDMGLTIPCDEHSFQSLTSTLR 104

[Close]

BLAST of CmoCh01G020220 vs. NCBI nr
Match: XP_010104433.1 (auxin-responsive protein SAUR50 [Morus notabilis] >EXC00966.1 hypothetical protein L484_016032 [Morus notabilis])

HSP 1 Score: 180.6 bits (457), Expect = 6.8e-42
Identity = 86/105 (81.90%), Postives = 95/105 (90.48%), Query Frame = 0


Query: 1   MAIRKSTKMPQTAVLKQMLKRCSSLGKKQQQYDEQGLPLDVPKGHFVVYVGENRSRHIVP 60
           MAIRKS ++PQTAVLKQ+LKRCSSLGKKQQ YDEQGLPLDVPKGHFVVYVGENRSR+IVP
Sbjct: 1   MAIRKSNRLPQTAVLKQILKRCSSLGKKQQDYDEQGLPLDVPKGHFVVYVGENRSRYIVP 60

Query: 61  ITYLNHPQFQILLQQAADEFGFDHDMGLTIPCDEHFFQSLTSTLR 106
           I++L  P+FQ LLQQA +EFGFDHDMGLTIPC+E  F SLTS LR
Sbjct: 61  ISFLTRPEFQTLLQQAEEEFGFDHDMGLTIPCEEEVFLSLTSMLR 105

[Close]

BLAST of CmoCh01G020220 vs. TAIR 10
Match: AT4G34760.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 155.6 bits (392), Expect = 2.2e-38
Identity = 75/104 (72.12%), Postives = 90/104 (86.54%), Query Frame = 0


Query: 3   IRKSTKMPQTAVLKQMLKRCSSLGKKQ-QQYDEQGLPLDVPKGHFVVYVGENRSRHIVPI 62
           ++K++K+ QTA+LKQ+LKRCSSLGKK    YDE  LPLDVPKGHF VYVGENRSR+IVPI
Sbjct: 4   MKKTSKLTQTAMLKQILKRCSSLGKKNGGGYDEDCLPLDVPKGHFPVYVGENRSRYIVPI 63

Query: 63  TYLNHPQFQILLQQAADEFGFDHDMGLTIPCDEHFFQSLTSTLR 106
           ++L HP+FQ LLQ+A +EFGFDHDMGLTIPCDE  FQ+LTS +R
Sbjct: 64  SFLTHPEFQSLLQRAEEEFGFDHDMGLTIPCDELVFQTLTSMIR 107

[Close]

BLAST of CmoCh01G020220 vs. TAIR 10
Match: AT1G75580.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 155.2 bits (391), Expect = 2.9e-38
Identity = 74/108 (68.52%), Postives = 91/108 (84.26%), Query Frame = 0


Query: 1   MAIRKSTKMPQTAVLKQMLKRCSSLGKKQQQY---DEQGLPLDVPKGHFVVYVGENRSRH 60
           MA++K+ K+ QTA++KQ+LKRCSSLGKKQ      DE G PL+VPKGHFVVYVGENR R+
Sbjct: 1   MAMKKANKLTQTAMIKQILKRCSSLGKKQSNVYGEDENGSPLNVPKGHFVVYVGENRVRY 60

Query: 61  IVPITYLNHPQFQILLQQAADEFGFDHDMGLTIPCDEHFFQSLTSTLR 106
           +VPI++L  P+FQ+LLQQA +EFGFDHDMGLTIPC+E  F+SLTS LR
Sbjct: 61  VVPISFLTRPEFQLLLQQAEEEFGFDHDMGLTIPCEEVVFRSLTSMLR 108

[Close]

BLAST of CmoCh01G020220 vs. TAIR 10
Match: AT4G38860.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 153.3 bits (386), Expect = 1.1e-37
Identity = 76/106 (71.70%), Postives = 92/106 (86.79%), Query Frame = 0


Query: 1   MAIRKSTKMPQTAVLKQMLKRCSSLGKKQQQYDEQGLPLDVPKGHFVVYVGENRSRHIVP 60
           MA+++S+K+ QTA+LKQ+LKRCSSLGKK Q YDE+GLPLDVPKGHF VYVGE R+R+IVP
Sbjct: 1   MAVKRSSKLTQTAMLKQILKRCSSLGKK-QCYDEEGLPLDVPKGHFPVYVGEKRTRYIVP 60

Query: 61  ITYLNHPQFQILLQQAADEFGFDHDM-GLTIPCDEHFFQSLTSTLR 106
           I++L HP+F ILLQQA +EFGF HDM GLTIPC+E  F SLTS +R
Sbjct: 61  ISFLTHPEFLILLQQAEEEFGFRHDMGGLTIPCEEVVFLSLTSMIR 105

[Close]

BLAST of CmoCh01G020220 vs. TAIR 10
Match: AT2G21220.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 151.8 bits (382), Expect = 3.2e-37
Identity = 72/104 (69.23%), Postives = 90/104 (86.54%), Query Frame = 0


Query: 1   MAIRKSTKMPQTAVLKQMLKRCSSLGKKQQQYDEQGLPLDVPKGHFVVYVGENRSRHIVP 60
           MA+++S+K+ QTA+LKQ+LKRCSSL  K Q YDE GLP+DVPKGHF VYVGE RSR+IVP
Sbjct: 1   MAVKRSSKLTQTAMLKQILKRCSSLA-KNQCYDEDGLPVDVPKGHFPVYVGEKRSRYIVP 60

Query: 61  ITYLNHPQFQILLQQAADEFGFDHDMGLTIPCDEHFFQSLTSTL 105
           I++L HP+F+ LLQQA +EFGF+HDMGLTIPC+E  F+SLTS +
Sbjct: 61  ISFLTHPKFKSLLQQAEEEFGFNHDMGLTIPCEEVVFRSLTSMI 103

[Close]

BLAST of CmoCh01G020220 vs. TAIR 10
Match: AT2G16580.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 147.5 bits (371), Expect = 6.0e-36
Identity = 72/105 (68.57%), Postives = 87/105 (82.86%), Query Frame = 0


Query: 3   IRKSTKMPQTAVLKQMLKRCSSLGKKQ--QQYDEQGLPLDVPKGHFVVYVGENRSRHIVP 62
           ++KSTK+ QTA+L+Q+LKRCSSLGKK     Y+E  LPLDVPKGHF VYVG NRSR+IVP
Sbjct: 4   LKKSTKLAQTAMLRQILKRCSSLGKKNGGGGYEEVDLPLDVPKGHFPVYVGHNRSRYIVP 63

Query: 63  ITYLNHPQFQILLQQAADEFGFDHDMGLTIPCDEHFFQSLTSTLR 106
           I++L +  FQ LL++A +EFGFDHDMGLTIPCDE FFQ LTS +R
Sbjct: 64  ISFLTNLDFQCLLRRAEEEFGFDHDMGLTIPCDELFFQDLTSMIR 108

The following BLAST results are available for this feature:

BLAST of CmoCh01G020220 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O65695	3.1e-37	72.12	Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana OX=3702 GN=SAUR50 PE=1 S...	[more]
Q9SL45	6.9e-29	59.82	Protein SMALL AUXIN UP-REGULATED RNA 10 OS=Arabidopsis thaliana OX=3702 GN=SAUR1...	[more]
P0DKL1	4.9e-27	57.84	Auxin-responsive protein SAUR50 OS=Helianthus annuus OX=4232 PE=3 SV=1	[more]
P32295	2.7e-17	59.70	Indole-3-acetic acid-induced protein ARG7 OS=Vigna radiata var. radiata OX=3916 ...	[more]
P33081	1.0e-16	59.09	Auxin-induced protein 15A OS=Glycine max OX=3847 PE=2 SV=1	[more]

BLAST of CmoCh01G020220 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1J0M7	1.9e-53	100.00	auxin-responsive protein SAUR50-like OS=Cucurbita maxima OX=3661 GN=LOC111480219...	[more]
A0A6J1FKC5	1.9e-53	100.00	auxin-responsive protein SAUR50-like OS=Cucurbita moschata OX=3662 GN=LOC1114465...	[more]
A0A6J1IE85	3.0e-43	88.12	auxin-responsive protein SAUR50-like OS=Cucurbita maxima OX=3661 GN=LOC111476445...	[more]
A0A6J1F9Z6	3.0e-43	88.12	auxin-responsive protein SAUR50-like OS=Cucurbita moschata OX=3662 GN=LOC1114434...	[more]
W9RZ83	3.3e-42	81.90	Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_016032 PE=3 SV=1	[more]

BLAST of CmoCh01G020220 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022941161.1	3.9e-53	100.00	auxin-responsive protein SAUR50-like [Cucurbita moschata] >XP_022980903.1 auxin-...	[more]
KAG6608586.1	1.1e-52	99.05	Auxin-responsive protein SAUR50, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022937029.1	6.2e-43	88.12	auxin-responsive protein SAUR50-like [Cucurbita moschata] >XP_022975872.1 auxin-...	[more]
XP_023535895.1	2.3e-42	87.13	auxin-responsive protein SAUR50-like [Cucurbita pepo subsp. pepo]	[more]
XP_010104433.1	6.8e-42	81.90	auxin-responsive protein SAUR50 [Morus notabilis] >EXC00966.1 hypothetical prote...	[more]

BLAST of CmoCh01G020220 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G34760.1	2.2e-38	72.12	SAUR-like auxin-responsive protein family	[more]
AT1G75580.1	2.9e-38	68.52	SAUR-like auxin-responsive protein family	[more]
AT4G38860.1	1.1e-37	71.70	SAUR-like auxin-responsive protein family	[more]
AT2G21220.1	3.2e-37	69.23	SAUR-like auxin-responsive protein family	[more]
AT2G16580.1	6.0e-36	68.57	SAUR-like auxin-responsive protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 15..103 e-value: 1.9E-28 score: 98.5
None	No IPR available	PANTHER	PTHR31374	AUXIN-INDUCED PROTEIN-LIKE-RELATED	coord: 6..105
None	No IPR available	PANTHER	PTHR31374:SF242	AUXIN-INDUCED PROTEIN 15A-LIKE	coord: 6..105

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh01G020220.1	CmoCh01G020220.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin