CmoCh01G020200 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh01G020200
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Auxin responsive SAUR protein
Location	Cmo_Chr01: 14202814 .. 14203266 (+)
RNA-Seq Expression	CmoCh01G020200
Synteny	CmoCh01G020200

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACGGCTGGACTCGGAAAATGCAGCAAAATCCGACACATTGTCAGGCTCCGACAAATGCTCCGACGGTGGCGCAACAAGGCACGAATATCCGCCAATCGTATCCCCTCGGACGTACCTGCCGGACACGTGGCCGTTTGCGTTGGAACGAGCTGTCGACGGTTCGTCGTCCGGGCAACCTACTTGAACCACCCGGTTTTCAAGAAGCTTTTAGTCGAAGCAGAAGAGGAATACGGGTTTAGCAATTCAGGTCCCTTGGCAATCCCTTGCGACGAATCGGTTTTCGAAGAAGTGATCCGGTTCATCTCTAGATCCGAACCACCCAACTCGGGGCGGTTCGTGAAATTGGACGATTATCAGAGTTACTGCCATATCGGAATCAGAAACAGAGTCGATTTCTGGCCGGAATCTCGGCCTTTGCTTCATGGGTTGGCCGAGAAATCCATCTGGTAA

mRNA sequence

ATGACGGCTGGACTCGGAAAATGCAGCAAAATCCGACACATTGTCAGGCTCCGACAAATGCTCCGACGGTGGCGCAACAAGGCACGAATATCCGCCAATCGTATCCCCTCGGACGTACCTGCCGGACACGTGGCCGTTTGCGTTGGAACGAGCTGTCGACGGTTCGTCGTCCGGGCAACCTACTTGAACCACCCGGTTTTCAAGAAGCTTTTAGTCGAAGCAGAAGAGGAATACGGGTTTAGCAATTCAGGTCCCTTGGCAATCCCTTGCGACGAATCGGTTTTCGAAGAAGTGATCCGGTTCATCTCTAGATCCGAACCACCCAACTCGGGGCGGTTCGTGAAATTGGACGATTATCAGAGTTACTGCCATATCGGAATCAGAAACAGAGTCGATTTCTGGCCGGAATCTCGGCCTTTGCTTCATGGGTTGGCCGAGAAATCCATCTGGTAA

Coding sequence (CDS)

ATGACGGCTGGACTCGGAAAATGCAGCAAAATCCGACACATTGTCAGGCTCCGACAAATGCTCCGACGGTGGCGCAACAAGGCACGAATATCCGCCAATCGTATCCCCTCGGACGTACCTGCCGGACACGTGGCCGTTTGCGTTGGAACGAGCTGTCGACGGTTCGTCGTCCGGGCAACCTACTTGAACCACCCGGTTTTCAAGAAGCTTTTAGTCGAAGCAGAAGAGGAATACGGGTTTAGCAATTCAGGTCCCTTGGCAATCCCTTGCGACGAATCGGTTTTCGAAGAAGTGATCCGGTTCATCTCTAGATCCGAACCACCCAACTCGGGGCGGTTCGTGAAATTGGACGATTATCAGAGTTACTGCCATATCGGAATCAGAAACAGAGTCGATTTCTGGCCGGAATCTCGGCCTTTGCTTCATGGGTTGGCCGAGAAATCCATCTGGTAA

Protein sequence

MTAGLGKCSKIRHIVRLRQMLRRWRNKARISANRIPSDVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVEAEEEYGFSNSGPLAIPCDESVFEEVIRFISRSEPPNSGRFVKLDDYQSYCHIGIRNRVDFWPESRPLLHGLAEKSIW

Homology

[Close]

BLAST of CmoCh01G020200 vs. ExPASy Swiss-Prot
Match: O65695 (Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana OX=3702 GN=SAUR50 PE=1 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 5.8e-13
Identity = 40/101 (39.60%), Postives = 57/101 (56.44%), Query Frame = 0


Query: 7   KCSKIRHIVRLRQMLRRW-----RNKARISANRIPSDVPAGHVAVCVGTSCRRFVVRATY 66
           K SK+     L+Q+L+R      +N      + +P DVP GH  V VG +  R++V  ++
Sbjct: 6   KTSKLTQTAMLKQILKRCSSLGKKNGGGYDEDCLPLDVPKGHFPVYVGENRSRYIVPISF 65

Query: 67  LNHPVFKKLLVEAEEEYGFSNSGPLAIPCDESVFEEVIRFI 103
           L HP F+ LL  AEEE+GF +   L IPCDE VF+ +   I
Sbjct: 66  LTHPEFQSLLQRAEEEFGFDHDMGLTIPCDELVFQTLTSMI 106

[Close]

BLAST of CmoCh01G020200 vs. ExPASy Swiss-Prot
Match: P33083 (Auxin-induced protein 6B OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 2.2e-12
Identity = 38/81 (46.91%), Postives = 53/81 (65.43%), Query Frame = 0


Query: 27  KARISANRIPS---DVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVEAEEEYGFSN- 86
           KA  SAN+  S   DV  G++AV VG   RRFV+  +YLN P F+ LL +AEEE+G+ + 
Sbjct: 10  KASFSANQASSKAVDVEKGYLAVYVGEKMRRFVIPVSYLNKPSFQDLLSQAEEEFGYHHP 69

Query: 87  SGPLAIPCDESVFEEVIRFIS 104
           +G L IPC E VF+ +  F++
Sbjct: 70  NGGLTIPCSEDVFQHITSFLN 90

[Close]

BLAST of CmoCh01G020200 vs. ExPASy Swiss-Prot
Match: O64538 (Auxin-responsive protein SAUR40 OS=Arabidopsis thaliana OX=3702 GN=SAUR40 PE=2 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 8.4e-12
Identity = 34/65 (52.31%), Postives = 43/65 (66.15%), Query Frame = 0


Query: 35  IPSDVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVEAEEEYGFSNSGPLAIPCDESV 94
           + S VP+GHV V VG    RFVV A  LNHPVF  LL  + +EYG++  G L IPC+  V
Sbjct: 44  VASSVPSGHVPVNVGEDKERFVVSAELLNHPVFVGLLNRSAQEYGYTQKGVLHIPCNVFV 103

Query: 95  FEEVI 100
           FE+V+
Sbjct: 104 FEQVV 108

[Close]

BLAST of CmoCh01G020200 vs. ExPASy Swiss-Prot
Match: Q9SGU2 (Auxin-responsive protein SAUR71 OS=Arabidopsis thaliana OX=3702 GN=SAUR71 PE=2 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 1.1e-11
Identity = 36/80 (45.00%), Postives = 45/80 (56.25%), Query Frame = 0


Query: 20  MLRRWRNKARISANRIPSDVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVEAEEEYG 79
           +LR    + R    +  S VP GHV V VG    RFVV A  LNHPVF  LL ++ +EYG
Sbjct: 19  LLRSESQRGRTKKEKHKSWVPEGHVPVYVGHEMERFVVNAELLNHPVFVALLKQSAQEYG 78

Query: 80  FSNSGPLAIPCDESVFEEVI 100
           +   G L IPC   VFE ++
Sbjct: 79  YEQQGVLRIPCHVLVFERIL 98

[Close]

BLAST of CmoCh01G020200 vs. ExPASy Swiss-Prot
Match: Q9LTV3 (Auxin-responsive protein SAUR72 OS=Arabidopsis thaliana OX=3702 GN=SAUR72 PE=1 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 5.4e-11
Identity = 34/71 (47.89%), Postives = 40/71 (56.34%), Query Frame = 0


Query: 37  SDVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVEAEEEYGFSNSGPLAIPCDESVFE 96
           S VP GHV V VG    RFVV A  LNHPVF  LL  + +EYG+   G L IPC   VFE
Sbjct: 48  SSVPEGHVPVYVGDEMERFVVSAELLNHPVFIGLLNRSAQEYGYEQKGVLQIPCHVLVFE 107

Query: 97  EVIRFISRSEP 108
            ++  +    P
Sbjct: 108 RIMESLRLGLP 118

[Close]

BLAST of CmoCh01G020200 vs. ExPASy TrEMBL
Match: A0A6J1FKE4 (auxin-induced protein 6B-like OS=Cucurbita moschata OX=3662 GN=LOC111446557 PE=3 SV=1)

HSP 1 Score: 317.4 bits (812), Expect = 3.2e-83
Identity = 150/150 (100.00%), Postives = 150/150 (100.00%), Query Frame = 0


Query: 1   MTAGLGKCSKIRHIVRLRQMLRRWRNKARISANRIPSDVPAGHVAVCVGTSCRRFVVRAT 60
           MTAGLGKCSKIRHIVRLRQMLRRWRNKARISANRIPSDVPAGHVAVCVGTSCRRFVVRAT
Sbjct: 1   MTAGLGKCSKIRHIVRLRQMLRRWRNKARISANRIPSDVPAGHVAVCVGTSCRRFVVRAT 60

Query: 61  YLNHPVFKKLLVEAEEEYGFSNSGPLAIPCDESVFEEVIRFISRSEPPNSGRFVKLDDYQ 120
           YLNHPVFKKLLVEAEEEYGFSNSGPLAIPCDESVFEEVIRFISRSEPPNSGRFVKLDDYQ
Sbjct: 61  YLNHPVFKKLLVEAEEEYGFSNSGPLAIPCDESVFEEVIRFISRSEPPNSGRFVKLDDYQ 120

Query: 121 SYCHIGIRNRVDFWPESRPLLHGLAEKSIW 151
           SYCHIGIRNRVDFWPESRPLLHGLAEKSIW
Sbjct: 121 SYCHIGIRNRVDFWPESRPLLHGLAEKSIW 150

[Close]

BLAST of CmoCh01G020200 vs. ExPASy TrEMBL
Match: A0A6J1J2Q9 (auxin-induced protein 6B-like OS=Cucurbita maxima OX=3661 GN=LOC111481278 PE=3 SV=1)

HSP 1 Score: 310.5 bits (794), Expect = 3.9e-81
Identity = 146/150 (97.33%), Postives = 149/150 (99.33%), Query Frame = 0


Query: 1   MTAGLGKCSKIRHIVRLRQMLRRWRNKARISANRIPSDVPAGHVAVCVGTSCRRFVVRAT 60
           MTAGLGKCSKIRHIVRLRQMLRRWRNKAR+SANRIPSDVPAGHVAVCVGTSCRRFVVRAT
Sbjct: 1   MTAGLGKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTSCRRFVVRAT 60

Query: 61  YLNHPVFKKLLVEAEEEYGFSNSGPLAIPCDESVFEEVIRFISRSEPPNSGRFVKLDDYQ 120
           YLNHPVFKKLLVEAEEE+GFSNSGPLAIPCDESVFEEVIRFISRSEPPNSGRFVKLDDYQ
Sbjct: 61  YLNHPVFKKLLVEAEEEFGFSNSGPLAIPCDESVFEEVIRFISRSEPPNSGRFVKLDDYQ 120

Query: 121 SYCHIGIRNRVDFWPESRPLLHGLAEKSIW 151
           SYCHIGIR+RVD WPESRPLLHGLAEKSIW
Sbjct: 121 SYCHIGIRSRVDMWPESRPLLHGLAEKSIW 150

[Close]

BLAST of CmoCh01G020200 vs. ExPASy TrEMBL
Match: A0A6J1F8H9 (auxin-induced protein 6B OS=Cucurbita moschata OX=3662 GN=LOC111443278 PE=3 SV=1)

HSP 1 Score: 293.9 bits (751), Expect = 3.8e-76
Identity = 136/150 (90.67%), Postives = 145/150 (96.67%), Query Frame = 0


Query: 1   MTAGLGKCSKIRHIVRLRQMLRRWRNKARISANRIPSDVPAGHVAVCVGTSCRRFVVRAT 60
           M+AGLGKCSKIRHIVRLRQMLRRWRNKAR+SANRIPSDVPAGHVAVCVGTSCRRFVVRAT
Sbjct: 1   MSAGLGKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTSCRRFVVRAT 60

Query: 61  YLNHPVFKKLLVEAEEEYGFSNSGPLAIPCDESVFEEVIRFISRSEPPNSGRFVKLDDYQ 120
           YLNHPVFKKLLV+AEEEYGF+N GPLAIPCDESVFEEVIRFISRS+ PNSGRFVKLD++Q
Sbjct: 61  YLNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESVFEEVIRFISRSDSPNSGRFVKLDEFQ 120

Query: 121 SYCHIGIRNRVDFWPESRPLLHGLAEKSIW 151
           +YCHIGIR  +D WPESRPLLHGLAEKSIW
Sbjct: 121 TYCHIGIRTGLDLWPESRPLLHGLAEKSIW 150

[Close]

BLAST of CmoCh01G020200 vs. ExPASy TrEMBL
Match: A0A5D3E601 (Auxin-induced protein 6B OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G008210 PE=3 SV=1)

HSP 1 Score: 293.5 bits (750), Expect = 5.0e-76
Identity = 137/150 (91.33%), Postives = 144/150 (96.00%), Query Frame = 0


Query: 1   MTAGLGKCSKIRHIVRLRQMLRRWRNKARISANRIPSDVPAGHVAVCVGTSCRRFVVRAT 60
           M+AGLGKCSKIRHIVRLRQMLRRWRNKAR+SANRIPSDVPAGHVAVCVGTS RRFVVRAT
Sbjct: 1   MSAGLGKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTSSRRFVVRAT 60

Query: 61  YLNHPVFKKLLVEAEEEYGFSNSGPLAIPCDESVFEEVIRFISRSEPPNSGRFVKLDDYQ 120
           YLNHPVFKKLL++AEEEYGF+N GPLAIPCDESVFEEVIRFISRSE PNSGRFVKLDD+Q
Sbjct: 61  YLNHPVFKKLLIQAEEEYGFTNQGPLAIPCDESVFEEVIRFISRSESPNSGRFVKLDDFQ 120

Query: 121 SYCHIGIRNRVDFWPESRPLLHGLAEKSIW 151
           SYCHIGIR  +D WPESRPLLHGLAEKSIW
Sbjct: 121 SYCHIGIRTGLDLWPESRPLLHGLAEKSIW 150

[Close]

BLAST of CmoCh01G020200 vs. ExPASy TrEMBL
Match: A0A1S3CRK3 (auxin-induced protein 6B OS=Cucumis melo OX=3656 GN=LOC103503890 PE=3 SV=1)

HSP 1 Score: 293.5 bits (750), Expect = 5.0e-76
Identity = 137/150 (91.33%), Postives = 144/150 (96.00%), Query Frame = 0


Query: 1   MTAGLGKCSKIRHIVRLRQMLRRWRNKARISANRIPSDVPAGHVAVCVGTSCRRFVVRAT 60
           M+AGLGKCSKIRHIVRLRQMLRRWRNKAR+SANRIPSDVPAGHVAVCVGTS RRFVVRAT
Sbjct: 1   MSAGLGKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTSSRRFVVRAT 60

Query: 61  YLNHPVFKKLLVEAEEEYGFSNSGPLAIPCDESVFEEVIRFISRSEPPNSGRFVKLDDYQ 120
           YLNHPVFKKLL++AEEEYGF+N GPLAIPCDESVFEEVIRFISRSE PNSGRFVKLDD+Q
Sbjct: 61  YLNHPVFKKLLIQAEEEYGFTNQGPLAIPCDESVFEEVIRFISRSESPNSGRFVKLDDFQ 120

Query: 121 SYCHIGIRNRVDFWPESRPLLHGLAEKSIW 151
           SYCHIGIR  +D WPESRPLLHGLAEKSIW
Sbjct: 121 SYCHIGIRTGLDLWPESRPLLHGLAEKSIW 150

[Close]

BLAST of CmoCh01G020200 vs. NCBI nr
Match: XP_022941181.1 (auxin-induced protein 6B-like [Cucurbita moschata] >KAG6608584.1 Auxin-responsive protein SAUR50, partial [Cucurbita argyrosperma subsp. sororia] >KAG7037902.1 Auxin-responsive protein SAUR50, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 317.4 bits (812), Expect = 6.7e-83
Identity = 150/150 (100.00%), Postives = 150/150 (100.00%), Query Frame = 0


Query: 1   MTAGLGKCSKIRHIVRLRQMLRRWRNKARISANRIPSDVPAGHVAVCVGTSCRRFVVRAT 60
           MTAGLGKCSKIRHIVRLRQMLRRWRNKARISANRIPSDVPAGHVAVCVGTSCRRFVVRAT
Sbjct: 1   MTAGLGKCSKIRHIVRLRQMLRRWRNKARISANRIPSDVPAGHVAVCVGTSCRRFVVRAT 60

Query: 61  YLNHPVFKKLLVEAEEEYGFSNSGPLAIPCDESVFEEVIRFISRSEPPNSGRFVKLDDYQ 120
           YLNHPVFKKLLVEAEEEYGFSNSGPLAIPCDESVFEEVIRFISRSEPPNSGRFVKLDDYQ
Sbjct: 61  YLNHPVFKKLLVEAEEEYGFSNSGPLAIPCDESVFEEVIRFISRSEPPNSGRFVKLDDYQ 120

Query: 121 SYCHIGIRNRVDFWPESRPLLHGLAEKSIW 151
           SYCHIGIRNRVDFWPESRPLLHGLAEKSIW
Sbjct: 121 SYCHIGIRNRVDFWPESRPLLHGLAEKSIW 150

[Close]

BLAST of CmoCh01G020200 vs. NCBI nr
Match: XP_022982465.1 (auxin-induced protein 6B-like [Cucurbita maxima])

HSP 1 Score: 310.5 bits (794), Expect = 8.1e-81
Identity = 146/150 (97.33%), Postives = 149/150 (99.33%), Query Frame = 0


Query: 1   MTAGLGKCSKIRHIVRLRQMLRRWRNKARISANRIPSDVPAGHVAVCVGTSCRRFVVRAT 60
           MTAGLGKCSKIRHIVRLRQMLRRWRNKAR+SANRIPSDVPAGHVAVCVGTSCRRFVVRAT
Sbjct: 1   MTAGLGKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTSCRRFVVRAT 60

Query: 61  YLNHPVFKKLLVEAEEEYGFSNSGPLAIPCDESVFEEVIRFISRSEPPNSGRFVKLDDYQ 120
           YLNHPVFKKLLVEAEEE+GFSNSGPLAIPCDESVFEEVIRFISRSEPPNSGRFVKLDDYQ
Sbjct: 61  YLNHPVFKKLLVEAEEEFGFSNSGPLAIPCDESVFEEVIRFISRSEPPNSGRFVKLDDYQ 120

Query: 121 SYCHIGIRNRVDFWPESRPLLHGLAEKSIW 151
           SYCHIGIR+RVD WPESRPLLHGLAEKSIW
Sbjct: 121 SYCHIGIRSRVDMWPESRPLLHGLAEKSIW 150

[Close]

BLAST of CmoCh01G020200 vs. NCBI nr
Match: XP_023525874.1 (auxin-induced protein 6B-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 309.7 bits (792), Expect = 1.4e-80
Identity = 148/150 (98.67%), Postives = 148/150 (98.67%), Query Frame = 0


Query: 1   MTAGLGKCSKIRHIVRLRQMLRRWRNKARISANRIPSDVPAGHVAVCVGTSCRRFVVRAT 60
           MTAGLGKCSKIRHIVRLRQMLRRWRNKARISANRIPSDVPAGHVAVCVGTSCRRFVVRAT
Sbjct: 1   MTAGLGKCSKIRHIVRLRQMLRRWRNKARISANRIPSDVPAGHVAVCVGTSCRRFVVRAT 60

Query: 61  YLNHPVFKKLLVEAEEEYGFSNSGPLAIPCDESVFEEVIRFISRSEPPNSGRFVKLDDYQ 120
           YLNHPVFKKLLVEAEEEYGFSNSGPLAIPCDESVFEEVIRFISRSEPPNSGRFVKLDD Q
Sbjct: 61  YLNHPVFKKLLVEAEEEYGFSNSGPLAIPCDESVFEEVIRFISRSEPPNSGRFVKLDDCQ 120

Query: 121 SYCHIGIRNRVDFWPESRPLLHGLAEKSIW 151
           SY HIGIRNRVDFWPESRPLLHGLAEKSIW
Sbjct: 121 SYYHIGIRNRVDFWPESRPLLHGLAEKSIW 150

[Close]

BLAST of CmoCh01G020200 vs. NCBI nr
Match: XP_038899268.1 (auxin-induced protein 6B-like [Benincasa hispida])

HSP 1 Score: 295.8 bits (756), Expect = 2.1e-76
Identity = 137/150 (91.33%), Postives = 145/150 (96.67%), Query Frame = 0


Query: 1   MTAGLGKCSKIRHIVRLRQMLRRWRNKARISANRIPSDVPAGHVAVCVGTSCRRFVVRAT 60
           M+AGLGKCSKIRHIVRLRQMLRRWRNKAR+SANRIPSDVPAGHVAVCVGTSCRRFVVRAT
Sbjct: 1   MSAGLGKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTSCRRFVVRAT 60

Query: 61  YLNHPVFKKLLVEAEEEYGFSNSGPLAIPCDESVFEEVIRFISRSEPPNSGRFVKLDDYQ 120
           YLNHP+FKKLLV+AEEEYGF+N GPLAIPC+ESVFEEVIRFISRSE PNSGRFVKLDD+Q
Sbjct: 61  YLNHPIFKKLLVQAEEEYGFTNQGPLAIPCEESVFEEVIRFISRSESPNSGRFVKLDDFQ 120

Query: 121 SYCHIGIRNRVDFWPESRPLLHGLAEKSIW 151
           SYCHIGIR  +D WPESRPLLHGLAEKSIW
Sbjct: 121 SYCHIGIRTGLDLWPESRPLLHGLAEKSIW 150

[Close]

BLAST of CmoCh01G020200 vs. NCBI nr
Match: XP_011652445.1 (auxin-induced protein 6B [Cucumis sativus])

HSP 1 Score: 293.9 bits (751), Expect = 7.9e-76
Identity = 138/150 (92.00%), Postives = 144/150 (96.00%), Query Frame = 0


Query: 1   MTAGLGKCSKIRHIVRLRQMLRRWRNKARISANRIPSDVPAGHVAVCVGTSCRRFVVRAT 60
           M+AGLGKCSKIRHIVRLRQMLRRWRNKAR+SANRIPSDVPAGHVAVCVGTS RRFVVRAT
Sbjct: 1   MSAGLGKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTSSRRFVVRAT 60

Query: 61  YLNHPVFKKLLVEAEEEYGFSNSGPLAIPCDESVFEEVIRFISRSEPPNSGRFVKLDDYQ 120
           YLNHPVFKKLLV+AEEEYGF+N GPLAIPCDESVFEEVIRFISRSE PNSGRFVKLDD+Q
Sbjct: 61  YLNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESVFEEVIRFISRSESPNSGRFVKLDDFQ 120

Query: 121 SYCHIGIRNRVDFWPESRPLLHGLAEKSIW 151
           SYCHIGIR  +D WPESRPLLHGLAEKSIW
Sbjct: 121 SYCHIGIRTGLDLWPESRPLLHGLAEKSIW 150

[Close]

BLAST of CmoCh01G020200 vs. TAIR 10
Match: AT1G75590.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 226.9 bits (577), Expect = 1.1e-59
Identity = 107/154 (69.48%), Postives = 128/154 (83.12%), Query Frame = 0


Query: 1   MTAGLGKCSKIRHIVRLRQMLRRWRNKARISAN---RIPSDVPAGHVAVCVGTSCRRFVV 60
           M  GLGKCSKIRHIVRLRQMLRRWR++AR+S++    +PSDVP+GHVAV VG+SCRRFVV
Sbjct: 1   MAGGLGKCSKIRHIVRLRQMLRRWRDQARMSSSFSRCVPSDVPSGHVAVYVGSSCRRFVV 60

Query: 61  RATYLNHPVFKKLLVEAEEEYGFSNSGPLAIPCDESVFEEVIRFISRSEPPNSGRFVKLD 120
           RATYLNHPV + LLV+AEEE+GF N GPL IPC+ESVFEE IRFISRS+   S RF   D
Sbjct: 61  RATYLNHPVLRNLLVQAEEEFGFVNQGPLVIPCEESVFEESIRFISRSDSTRSRRFTCPD 120

Query: 121 DYQSYCH-IGIRNRVDFWPESRPLLHGLAEKSIW 151
           D+Q  CH +GIR+++D W ESRPLLHG+ EK++W
Sbjct: 121 DFQKNCHVVGIRSKLDLWIESRPLLHGVTEKAVW 154

[Close]

BLAST of CmoCh01G020200 vs. TAIR 10
Match: AT1G19840.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 212.6 bits (540), Expect = 2.2e-55
Identity = 104/154 (67.53%), Postives = 123/154 (79.87%), Query Frame = 0


Query: 1   MTAGLGKCSKIRHIVRLRQMLRRWRNKARIS--ANRIPSDVPAGHVAVCVGTSCRRFVVR 60
           M   L KCSKIRHIVRLRQMLRRWRNKAR+S  +  +PSDVP+GHVAVCVG+ CRRFVVR
Sbjct: 1   MAGSLVKCSKIRHIVRLRQMLRRWRNKARLSSVSRCVPSDVPSGHVAVCVGSGCRRFVVR 60

Query: 61  ATYLNHPVFKKLLVEAEEEYGFSNSGPLAIPCDESVFEEVIRFISRSEPPNSGRFVKLDD 120
           A+YLNHP+   LLV+AEEE+GF+N GPL IPC+ESVFEE IRFISRS+   S RF   DD
Sbjct: 61  ASYLNHPIISNLLVQAEEEFGFANQGPLVIPCEESVFEEAIRFISRSDSSRSSRFTCPDD 120

Query: 121 YQSYCH--IGIRNRVDFWPESRPLLHGLAEKSIW 151
            Q  C+  I I++++D   ESRPLLHG+AEK+IW
Sbjct: 121 LQK-CNGGIKIKSKLDLMIESRPLLHGVAEKAIW 153

[Close]

BLAST of CmoCh01G020200 vs. TAIR 10
Match: AT5G10990.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 203.0 bits (515), Expect = 1.7e-52
Identity = 100/151 (66.23%), Postives = 120/151 (79.47%), Query Frame = 0


Query: 1   MTAGLGKCSKIRHIVRLRQMLRRWRNKARISANR--IPSDVPAGHVAVCVGTSCRRFVVR 60
           M  G+GKCSKIRHIV+LRQMLR+WRNKAR+S+ R  +PSDVP+GHVAV VG SCRRFVV 
Sbjct: 1   MAGGIGKCSKIRHIVKLRQMLRQWRNKARMSSVRRSVPSDVPSGHVAVYVGRSCRRFVVL 60

Query: 61  ATYLNHPVFKKLLVEAEEEYGFSNSGPLAIPCDESVFEEVIRFISRSEPPNSGRFVKLDD 120
           ATYLNHP+   LLV+AEEE+GF+N GPL IPC+ESVFEE IRFI+R     S RF   DD
Sbjct: 61  ATYLNHPILMNLLVKAEEEFGFANQGPLVIPCEESVFEESIRFITR-----SSRFTCTDD 120

Query: 121 YQSYCHIGIRNRVDFWPESRPLLHGLAEKSI 150
            +   H GIR+++D   ESRPLLHG++EK+I
Sbjct: 121 LKKNRHGGIRSKLDLLMESRPLLHGVSEKAI 146

[Close]

BLAST of CmoCh01G020200 vs. TAIR 10
Match: AT4G34750.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 157.9 bits (398), Expect = 6.3e-39
Identity = 85/153 (55.56%), Postives = 113/153 (73.86%), Query Frame = 0


Query: 5   LGKCSKIRHIVRLRQMLRRWRNKARI-SANRIP-SDVPAGHVAVCVGTSCRRFVVRATYL 64
           +GK +KI  +VR+RQML++W+ KA I S+N  P SDVP GHVAV VG + RR+VVRA +L
Sbjct: 1   MGKNNKIGSVVRIRQMLKQWQKKAHIGSSNNDPVSDVPPGHVAVSVGENRRRYVVRAKHL 60

Query: 65  NHPVFKKLLVEAEEEYGFSNSGPLAIPCDESVFEEVIRFISRSE-PPNSGR----FVKLD 124
           NHP+F++LL EAEEEYGF+N GPLAIPCDES+FE++I  ++R E   +SGR       L+
Sbjct: 61  NHPIFRRLLAEAEEEYGFANVGPLAIPCDESLFEDIIAIVTRCESSSSSGRGNPPAATLE 120

Query: 125 DYQSYCHIGI-RNRVDFWPESRPLLHGLAEKSI 150
           D +   H+G+ +N V    ESRPLL G+AEKS+
Sbjct: 121 DLRRCSHVGLAKNNV----ESRPLLPGIAEKSV 149

[Close]

BLAST of CmoCh01G020200 vs. TAIR 10
Match: AT4G34750.2 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 157.9 bits (398), Expect = 6.3e-39
Identity = 85/153 (55.56%), Postives = 113/153 (73.86%), Query Frame = 0


Query: 5   LGKCSKIRHIVRLRQMLRRWRNKARI-SANRIP-SDVPAGHVAVCVGTSCRRFVVRATYL 64
           +GK +KI  +VR+RQML++W+ KA I S+N  P SDVP GHVAV VG + RR+VVRA +L
Sbjct: 1   MGKNNKIGSVVRIRQMLKQWQKKAHIGSSNNDPVSDVPPGHVAVSVGENRRRYVVRAKHL 60

Query: 65  NHPVFKKLLVEAEEEYGFSNSGPLAIPCDESVFEEVIRFISRSE-PPNSGR----FVKLD 124
           NHP+F++LL EAEEEYGF+N GPLAIPCDES+FE++I  ++R E   +SGR       L+
Sbjct: 61  NHPIFRRLLAEAEEEYGFANVGPLAIPCDESLFEDIIAIVTRCESSSSSGRGNPPAATLE 120

Query: 125 DYQSYCHIGI-RNRVDFWPESRPLLHGLAEKSI 150
           D +   H+G+ +N V    ESRPLL G+AEKS+
Sbjct: 121 DLRRCSHVGLAKNNV----ESRPLLPGIAEKSV 149

The following BLAST results are available for this feature:

BLAST of CmoCh01G020200 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O65695	5.8e-13	39.60	Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana OX=3702 GN=SAUR50 PE=1 S...	[more]
P33083	2.2e-12	46.91	Auxin-induced protein 6B OS=Glycine max OX=3847 PE=2 SV=1	[more]
O64538	8.4e-12	52.31	Auxin-responsive protein SAUR40 OS=Arabidopsis thaliana OX=3702 GN=SAUR40 PE=2 S...	[more]
Q9SGU2	1.1e-11	45.00	Auxin-responsive protein SAUR71 OS=Arabidopsis thaliana OX=3702 GN=SAUR71 PE=2 S...	[more]
Q9LTV3	5.4e-11	47.89	Auxin-responsive protein SAUR72 OS=Arabidopsis thaliana OX=3702 GN=SAUR72 PE=1 S...	[more]

BLAST of CmoCh01G020200 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FKE4	3.2e-83	100.00	auxin-induced protein 6B-like OS=Cucurbita moschata OX=3662 GN=LOC111446557 PE=3...	[more]
A0A6J1J2Q9	3.9e-81	97.33	auxin-induced protein 6B-like OS=Cucurbita maxima OX=3661 GN=LOC111481278 PE=3 S...	[more]
A0A6J1F8H9	3.8e-76	90.67	auxin-induced protein 6B OS=Cucurbita moschata OX=3662 GN=LOC111443278 PE=3 SV=1	[more]
A0A5D3E601	5.0e-76	91.33	Auxin-induced protein 6B OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A1S3CRK3	5.0e-76	91.33	auxin-induced protein 6B OS=Cucumis melo OX=3656 GN=LOC103503890 PE=3 SV=1	[more]

BLAST of CmoCh01G020200 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022941181.1	6.7e-83	100.00	auxin-induced protein 6B-like [Cucurbita moschata] >KAG6608584.1 Auxin-responsiv...	[more]
XP_022982465.1	8.1e-81	97.33	auxin-induced protein 6B-like [Cucurbita maxima]	[more]
XP_023525874.1	1.4e-80	98.67	auxin-induced protein 6B-like [Cucurbita pepo subsp. pepo]	[more]
XP_038899268.1	2.1e-76	91.33	auxin-induced protein 6B-like [Benincasa hispida]	[more]
XP_011652445.1	7.9e-76	92.00	auxin-induced protein 6B [Cucumis sativus]	[more]

BLAST of CmoCh01G020200 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G75590.1	1.1e-59	69.48	SAUR-like auxin-responsive protein family	[more]
AT1G19840.1	2.2e-55	67.53	SAUR-like auxin-responsive protein family	[more]
AT5G10990.1	1.7e-52	66.23	SAUR-like auxin-responsive protein family	[more]
AT4G34750.1	6.3e-39	55.56	SAUR-like auxin-responsive protein family	[more]
AT4G34750.2	6.3e-39	55.56	SAUR-like auxin-responsive protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 16..101 e-value: 5.3E-30 score: 103.4
None	No IPR available	PANTHER	PTHR31374:SF183	SMALL AUXIN-UP RNA-RELATED	coord: 6..143
None	No IPR available	PANTHER	PTHR31374	AUXIN-INDUCED PROTEIN-LIKE-RELATED	coord: 6..143

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh01G020200.1	CmoCh01G020200.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin