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CmoCh01G019680 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ACTGACGCTGACCTAAAATTATTTTATATTTGAGAGAAGATCAAGGAGCTTCCACCTTTTCGAACTCTTTGGAGGGACTGTCGTCGTATTTTGGAATTAACTGCTACACGGAGTTGCGACTTTGCGAGGAAGAAGACTGAGAGAGCTTGTTTCCGATCTGGCACAATTAACTTGCGTAAGCATCTTTCTCGAGCTGTTTAAATCGCTGCAATTCTCTTGATTTTTCGATCTTAGTGCAATGTCCTGTCATTGATTGGGAATCTGAGATTTGTTACTGTTTGATTGTTGCCTTGAATTTTGATGCTCAAAATGCGCTTGCCTTTCTGTTAAGCCCTAGAAATTTGGAATCCACTGGAGATTTTTTGTGGTGATTTCTCCTTCTTCTTTGGAAGTCTTCTGCCGGCAAATTAATCTCGTTTTTGCCAGTGAAGACTTCTGTCCGGATCCTTCTAGTAAGTTCGTATCAAGCAGTAGACTATTCTTTTTCATGTAAGAAACGGAGAATTTCTGTTAGTTTGAATGTAACAGGTTCGTGATTGCACAGCTATAATGTTTGGTCGGTGGTCTACTTCTCATCACGAGGAAGGGAACAGTCAAGAACAGATCACATCGAAGGTATGATGAGTTGATGGTCAAAGAAAATTGTGCATGTAGGTTCCTGGCTCCCAGATCCATGTATTTAACATTTTGAACTTGTTTGGGCTTGATTCGATCTAAACCATCTTGAAGATTTTTCTGGATCATGTGTTCTATACCAGGTTTGAAGACGATTGAGTATAAGATTTTTACGATTTTGCAGGTCAATGAGCTTAAGGCCAAGTTAGGACCCTTAGTTGGACGCAATGCAATATATTGCAGTGATGCATGCTTGAAAAGATATCTAGTGGCTAGGAATTGGAATGTAGACAAAGCAAAGAAAATGTTGGAGGAGACATTCAAATGGAGATCTATGTATAAGCCTGATGAAATTCGTTGGGTAAGCATGTAATAGTTTCATAAAGCTTGATGTCTATGGAAGCTAGAGGTGAAGAGTTGAAAAGTAGTAATGGAGATTTATGTTGCCTTTACACTGATCATTTTAGTTTGTCTTACCATTTAGCCTGAAATAGCATTTGAAAGTGAGACCGGAAAACTTTATCGAGCAAGTTTTCATGACCGAGAAGGAAGAACTGTCCTCATAATGAAGCCAGGAAAGCAGGTATTTTTTAGTAGTGTAAATTTTGCATCCAAGTTCTTAGCTATTTCAGAATAATTTGTGTTAAAAGCCCAGAACTGTTTCTTTTTTAACAGAACACAACATCATTAGAGAATCAAATTCGGCATTTGGTATATCTTATGGAGAATGCTCTTCTCAACCTTCCGGAAGGTCAAGAACAGATGTCATGGTTGATTGATTTTAATGGTTGGTCTCTTAGCACCAGCGTGCCAATCAAATCCGCACGAGAAACCGTCAACATCTTGCAGAACCACTATCCCGAGCGACTAGCTCTAGCGTTTCTATATAATCCCCCAAGGATATTTGAAGCGTTCTGGAAGGTATGGTTTATGCTCTCTTAGATCTTGCAATATCTCTTCATTCCATATGGTATAGACACCAATAAAACAAGGCATATCATTCTTCTAGCAAAATTTGAACGACGAGCATTTAAACCCTCTTGTAATTTTGTTTATTACTTGTAGGTAGTCAAATACTTCTTAGATCCCAAAACATTTCAGAAAGTGAGATTTGTTTACCCTAAGAAGCAAGAGAGTGTGGAACTTATGAAGTCATATTTTGATGAGGAGAATCTTCCATCAGAGTTTGGAGGAAAAGCTCAACTGGAATATGTCCATGAGGAGTACTCTAGATTAATGATTCAGGATGATGTTAAATGTGCTGCCTTCTGGGAACCTGGTGAAAAGCAACACCACGTCATCAATGGCTACACCAGTGCAGCGGTGGCTCCAGAGTGAGTGAGTGTTCTTCGCAACAACCGCCGAGCTGAGCCATCAGCCCCTATCAGTTACAGGGGTTGTCACTTGTAGTTGCAGCCAAGCCCCTTAAATGAGTTTCATTTACGAACTTTTCATGGTCTATAGAGGAAGATATACAGGGAAAAGAACCCTTAATAACTTCACTGATCGTTCTGTTTTCGTTGGTCATTGTAGCTTTGGTTAGAACACTTTGATTATCCTGTAAAAGATCGGTCAATTTGATTGAGTGGTAGAGATCTAACCCATCTCAAAAAACAGTCTTCCTTTCAATCACATCTCAGAAACAGATTATTCACAAGAAGACAACGAGTAATGTGCAGTCATTTGATAAAGAAATGATATTAGCTTAGCTGAGCTTCTATACACATGTTGTGAAACAAACATGCTAGGACACAAATTCTGCTGTCAGAGATGGATATTATTGACACAAACCATTGCTGTCGGCTTTCTGAATCTCAAGGTTAAGACAAGGACTCCAATGAAAGATTAGTAAGAGAAATCATGTCATATAATCTGCCTTCTTAGAGTTCGACTAGTTGCCTGGTAAGTGCGCACGAGCAAGCCAACTCCTACACCAATCCCCAAGCAGATACCAAGTCCGATTCCTACACCAACCCTCACGCCCGAGTTGAACCAGGATAGTTCACCATCTTCTCTTTCCATGTTGTCTGTTCTCCAGTACATGTTAGCATAGTTATCTTCAGTTTCTGGTCTATAATGTCTGTACTCTGAAACCTGCACAAACATAGAGTAGACAATGTTATAAAGCACTGGCTTAGGCAGCCCAGGCAGCAAGAAAGACTGTGGAAACCATTGCAGAGAGCAACCCATTCTCCCTGCTAGTTTGACAGTGACTTGATTTGTATAGTAAGACTAGTTATGTTCAATTATGCTACATTGTGAGAAGAAATGGCAGGAAAGAGTGGGTGAAGTATCCAACAGATAACCATAGAAACTCCAGG ACTGACGCTGACCTAAAATTATTTTATATTTGAGAGAAGATCAAGGAGCTTCCACCTTTTCGAACTCTTTGGAGGGACTGTCGTCGTATTTTGGAATTAACTGCTACACGGAGTTGCGACTTTGCGAGGAAGAAGACTGAGAGAGCTTGTTTCCGATCTGGCACAATTAACTTGCCCCTAGAAATTTGGAATCCACTGGAGATTTTTTGTGGTGATTTCTCCTTCTTCTTTGGAAGTCTTCTGCCGGCAAATTAATCTCGTTTTTGCCAGTGAAGACTTCTGTCCGGATCCTTCTAGTTCGTGATTGCACAGCTATAATGTTTGGTCGGTGGTCTACTTCTCATCACGAGGAAGGGAACAGTCAAGAACAGATCACATCGAAGGTCAATGAGCTTAAGGCCAAGTTAGGACCCTTAGTTGGACGCAATGCAATATATTGCAGTGATGCATGCTTGAAAAGATATCTAGTGGCTAGGAATTGGAATGTAGACAAAGCAAAGAAAATGTTGGAGGAGACATTCAAATGGAGATCTATGTATAAGCCTGATGAAATTCGTTGGCCTGAAATAGCATTTGAAAGTGAGACCGGAAAACTTTATCGAGCAAGTTTTCATGACCGAGAAGGAAGAACTGTCCTCATAATGAAGCCAGGAAAGCAGAACACAACATCATTAGAGAATCAAATTCGGCATTTGGTATATCTTATGGAGAATGCTCTTCTCAACCTTCCGGAAGGTCAAGAACAGATGTCATGGTTGATTGATTTTAATGGTTGGTCTCTTAGCACCAGCGTGCCAATCAAATCCGCACGAGAAACCGTCAACATCTTGCAGAACCACTATCCCGAGCGACTAGCTCTAGCGTTTCTATATAATCCCCCAAGGATATTTGAAGCGTTCTGGAAGGTAGTCAAATACTTCTTAGATCCCAAAACATTTCAGAAAGTGAGATTTGTTTACCCTAAGAAGCAAGAGAGTGTGGAACTTATGAAGTCATATTTTGATGAGGAGAATCTTCCATCAGAGTTTGGAGGAAAAGCTCAACTGGAATATGTCCATGAGGAGTACTCTAGATTAATGATTCAGGATGATGTTAAATGTGCTGCCTTCTGGGAACCTGGTGAAAAGCAACACCACGTCATCAATGGCTACACCAGTGCAGCGGTGGCTCCAGAGTGAGTGAGTGTTCTTCGCAACAACCGCCGAGCTGAGCCATCAGCCCCTATCAGTTACAGGGGTTGTCACTTGTAGTTGCAGCCAAGCCCCTTAAATGAGTTTCATTTACGAACTTTTCATGGTCTATAGAGGAAGATATACAGGGAAAAGAACCCTTAATAACTTCACTGATCGTTCTGTTTTCGTTGGTCATTGTAGCTTTGGTTAGAACACTTTGATTATCCTGTAAAAGATCGGTCAATTTGATTGAGTGGTAGAGATCTAACCCATCTCAAAAAACAGTCTTCCTTTCAATCACATCTCAGAAACAGATTATTCACAAGAAGACAACGAGTAATGTGCAGTCATTTGATAAAGAAATGATATTAGCTTAGCTGAGCTTCTATACACATGTTGTGAAACAAACATGCTAGGACACAAATTCTGCTGTCAGAGATGGATATTATTGACACAAACCATTGCTGTCGGCTTTCTGAATCTCAAGGTTAAGACAAGGACTCCAATGAAAGATTAGTAAGAGAAATCATGTCATATAATCTGCCTTCTTAGAGTTCGACTAGTTGCCTGGTAAGTGCGCACGAGCAAGCCAACTCCTACACCAATCCCCAAGCAGATACCAAGTCCGATTCCTACACCAACCCTCACGCCCGAGTTGAACCAGGATAGTTCACCATCTTCTCTTTCCATGTTGTCTGTTCTCCAGTACATGTTAGCATAGTTATCTTCAGTTTCTGGTCTATAATGTCTGTACTCTGAAACCTGCACAAACATAGAGTAGACAATGTTATAAAGCACTGGCTTAGGCAGCCCAGGCAGCAAGAAAGACTGTGGAAACCATTGCAGAGAGCAACCCATTCTCCCTGCTAGTTTGACAGTGACTTGATTTGTATAGTAAGACTAGTTATGTTCAATTATGCTACATTGTGAGAAGAAATGGCAGGAAAGAGTGGGTGAAGTATCCAACAGATAACCATAGAAACTCCAGG ATGTTTGGTCGGTGGTCTACTTCTCATCACGAGGAAGGGAACAGTCAAGAACAGATCACATCGAAGGTCAATGAGCTTAAGGCCAAGTTAGGACCCTTAGTTGGACGCAATGCAATATATTGCAGTGATGCATGCTTGAAAAGATATCTAGTGGCTAGGAATTGGAATGTAGACAAAGCAAAGAAAATGTTGGAGGAGACATTCAAATGGAGATCTATGTATAAGCCTGATGAAATTCGTTGGCCTGAAATAGCATTTGAAAGTGAGACCGGAAAACTTTATCGAGCAAGTTTTCATGACCGAGAAGGAAGAACTGTCCTCATAATGAAGCCAGGAAAGCAGAACACAACATCATTAGAGAATCAAATTCGGCATTTGGTATATCTTATGGAGAATGCTCTTCTCAACCTTCCGGAAGGTCAAGAACAGATGTCATGGTTGATTGATTTTAATGGTTGGTCTCTTAGCACCAGCGTGCCAATCAAATCCGCACGAGAAACCGTCAACATCTTGCAGAACCACTATCCCGAGCGACTAGCTCTAGCGTTTCTATATAATCCCCCAAGGATATTTGAAGCGTTCTGGAAGGTAGTCAAATACTTCTTAGATCCCAAAACATTTCAGAAAGTGAGATTTGTTTACCCTAAGAAGCAAGAGAGTGTGGAACTTATGAAGTCATATTTTGATGAGGAGAATCTTCCATCAGAGTTTGGAGGAAAAGCTCAACTGGAATATGTCCATGAGGAGTACTCTAGATTAATGATTCAGGATGATGTTAAATGTGCTGCCTTCTGGGAACCTGGTGAAAAGCAACACCACGTCATCAATGGCTACACCAGTGCAGCGGTGGCTCCAGAGTGA MFGRWSTSHHEEGNSQEQITSKVNELKAKLGPLVGRNAIYCSDACLKRYLVARNWNVDKAKKMLEETFKWRSMYKPDEIRWPEIAFESETGKLYRASFHDREGRTVLIMKPGKQNTTSLENQIRHLVYLMENALLNLPEGQEQMSWLIDFNGWSLSTSVPIKSARETVNILQNHYPERLALAFLYNPPRIFEAFWKVVKYFLDPKTFQKVRFVYPKKQESVELMKSYFDEENLPSEFGGKAQLEYVHEEYSRLMIQDDVKCAAFWEPGEKQHHVINGYTSAAVAPE Homology
BLAST of CmoCh01G019680 vs. ExPASy Swiss-Prot
Match: Q9UU99 (CRAL-TRIO domain-containing protein C23B6.04c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPCC23B6.04c PE=1 SV=1) HSP 1 Score: 134.4 bits (337), Expect = 2.0e-30 Identity = 85/252 (33.73%), Postives = 130/252 (51.59%), Query Frame = 0
BLAST of CmoCh01G019680 vs. ExPASy Swiss-Prot
Match: P53844 (Phosphatidylinositol transfer protein PDR17 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=PDR17 PE=1 SV=1) HSP 1 Score: 122.5 bits (306), Expect = 7.9e-27 Identity = 86/262 (32.82%), Postives = 122/262 (46.56%), Query Frame = 0
BLAST of CmoCh01G019680 vs. ExPASy Swiss-Prot
Match: Q55CU8 (Phosphatidylinositol transfer protein 3 OS=Dictyostelium discoideum OX=44689 GN=pitC PE=2 SV=1) HSP 1 Score: 122.1 bits (305), Expect = 1.0e-26 Identity = 73/246 (29.67%), Postives = 128/246 (52.03%), Query Frame = 0
BLAST of CmoCh01G019680 vs. ExPASy Swiss-Prot
Match: P53860 (Phosphatidylinositol transfer protein PDR16 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=PDR16 PE=1 SV=1) HSP 1 Score: 120.2 bits (300), Expect = 3.9e-26 Identity = 76/252 (30.16%), Postives = 123/252 (48.81%), Query Frame = 0
BLAST of CmoCh01G019680 vs. ExPASy Swiss-Prot
Match: P45816 (SEC14 cytosolic factor OS=Yarrowia lipolytica (strain CLIB 122 / E 150) OX=284591 GN=SEC14 PE=3 SV=2) HSP 1 Score: 88.6 bits (218), Expect = 1.3e-16 Identity = 80/249 (32.13%), Postives = 119/249 (47.79%), Query Frame = 0
BLAST of CmoCh01G019680 vs. ExPASy TrEMBL
Match: A0A6J1FJV0 (CRAL-TRIO domain-containing protein C23B6.04c isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111446094 PE=4 SV=1) HSP 1 Score: 593.6 bits (1529), Expect = 4.4e-166 Identity = 286/286 (100.00%), Postives = 286/286 (100.00%), Query Frame = 0
BLAST of CmoCh01G019680 vs. ExPASy TrEMBL
Match: A0A6J1J0L2 (CRAL-TRIO domain-containing protein C23B6.04c isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111480825 PE=4 SV=1) HSP 1 Score: 593.2 bits (1528), Expect = 5.8e-166 Identity = 285/286 (99.65%), Postives = 286/286 (100.00%), Query Frame = 0
BLAST of CmoCh01G019680 vs. ExPASy TrEMBL
Match: A0A1S3CRQ6 (CRAL-TRIO domain-containing protein C23B6.04c OS=Cucumis melo OX=3656 GN=LOC103503951 PE=4 SV=1) HSP 1 Score: 561.2 bits (1445), Expect = 2.4e-156 Identity = 270/286 (94.41%), Postives = 277/286 (96.85%), Query Frame = 0
BLAST of CmoCh01G019680 vs. ExPASy TrEMBL
Match: A0A5D3D813 (CRAL-TRIO domain-containing protein C23B6.04c OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold242G00200 PE=4 SV=1) HSP 1 Score: 561.2 bits (1445), Expect = 2.4e-156 Identity = 270/286 (94.41%), Postives = 277/286 (96.85%), Query Frame = 0
BLAST of CmoCh01G019680 vs. ExPASy TrEMBL
Match: A0A6J1FIQ2 (CRAL-TRIO domain-containing protein C23B6.04c isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111446094 PE=4 SV=1) HSP 1 Score: 548.1 bits (1411), Expect = 2.1e-152 Identity = 264/265 (99.62%), Postives = 265/265 (100.00%), Query Frame = 0
BLAST of CmoCh01G019680 vs. NCBI nr
Match: XP_022940522.1 (CRAL-TRIO domain-containing protein C23B6.04c isoform X1 [Cucurbita moschata] >XP_022940523.1 CRAL-TRIO domain-containing protein C23B6.04c isoform X1 [Cucurbita moschata] >XP_022940524.1 CRAL-TRIO domain-containing protein C23B6.04c isoform X1 [Cucurbita moschata] >XP_022940525.1 CRAL-TRIO domain-containing protein C23B6.04c isoform X1 [Cucurbita moschata]) HSP 1 Score: 593.6 bits (1529), Expect = 9.2e-166 Identity = 286/286 (100.00%), Postives = 286/286 (100.00%), Query Frame = 0
BLAST of CmoCh01G019680 vs. NCBI nr
Match: XP_022981777.1 (CRAL-TRIO domain-containing protein C23B6.04c isoform X1 [Cucurbita maxima] >XP_022981778.1 CRAL-TRIO domain-containing protein C23B6.04c isoform X1 [Cucurbita maxima] >XP_022981779.1 CRAL-TRIO domain-containing protein C23B6.04c isoform X1 [Cucurbita maxima] >XP_022981780.1 CRAL-TRIO domain-containing protein C23B6.04c isoform X1 [Cucurbita maxima] >XP_022981781.1 CRAL-TRIO domain-containing protein C23B6.04c isoform X1 [Cucurbita maxima]) HSP 1 Score: 593.2 bits (1528), Expect = 1.2e-165 Identity = 285/286 (99.65%), Postives = 286/286 (100.00%), Query Frame = 0
BLAST of CmoCh01G019680 vs. NCBI nr
Match: KAG6608532.1 (hypothetical protein SDJN03_01874, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 593.2 bits (1528), Expect = 1.2e-165 Identity = 285/286 (99.65%), Postives = 286/286 (100.00%), Query Frame = 0
BLAST of CmoCh01G019680 vs. NCBI nr
Match: XP_023525039.1 (CRAL-TRIO domain-containing protein C23B6.04c isoform X1 [Cucurbita pepo subsp. pepo] >XP_023525040.1 CRAL-TRIO domain-containing protein C23B6.04c isoform X1 [Cucurbita pepo subsp. pepo] >XP_023525041.1 CRAL-TRIO domain-containing protein C23B6.04c isoform X1 [Cucurbita pepo subsp. pepo] >XP_023525042.1 CRAL-TRIO domain-containing protein C23B6.04c isoform X1 [Cucurbita pepo subsp. pepo] >XP_023525043.1 CRAL-TRIO domain-containing protein C23B6.04c isoform X1 [Cucurbita pepo subsp. pepo] >XP_023525044.1 CRAL-TRIO domain-containing protein C23B6.04c isoform X1 [Cucurbita pepo subsp. pepo] >XP_023525045.1 CRAL-TRIO domain-containing protein C23B6.04c isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 592.8 bits (1527), Expect = 1.6e-165 Identity = 284/286 (99.30%), Postives = 286/286 (100.00%), Query Frame = 0
BLAST of CmoCh01G019680 vs. NCBI nr
Match: XP_038906163.1 (CRAL-TRIO domain-containing protein C23B6.04c [Benincasa hispida] >XP_038906164.1 CRAL-TRIO domain-containing protein C23B6.04c [Benincasa hispida]) HSP 1 Score: 568.5 bits (1464), Expect = 3.2e-158 Identity = 270/286 (94.41%), Postives = 279/286 (97.55%), Query Frame = 0
BLAST of CmoCh01G019680 vs. TAIR 10
Match: AT1G75170.1 (Sec14p-like phosphatidylinositol transfer family protein ) HSP 1 Score: 417.5 bits (1072), Expect = 8.4e-117 Identity = 199/288 (69.10%), Postives = 234/288 (81.25%), Query Frame = 0
BLAST of CmoCh01G019680 vs. TAIR 10
Match: AT1G75170.2 (Sec14p-like phosphatidylinositol transfer family protein ) HSP 1 Score: 417.5 bits (1072), Expect = 8.4e-117 Identity = 199/288 (69.10%), Postives = 234/288 (81.25%), Query Frame = 0
BLAST of CmoCh01G019680 vs. TAIR 10
Match: AT4G36640.1 (Sec14p-like phosphatidylinositol transfer family protein ) HSP 1 Score: 361.3 bits (926), Expect = 7.1e-100 Identity = 164/277 (59.21%), Postives = 216/277 (77.98%), Query Frame = 0
BLAST of CmoCh01G019680 vs. TAIR 10
Match: AT1G75170.3 (Sec14p-like phosphatidylinositol transfer family protein ) HSP 1 Score: 315.1 bits (806), Expect = 5.9e-86 Identity = 148/206 (71.84%), Postives = 175/206 (84.95%), Query Frame = 0
BLAST of CmoCh01G019680 vs. TAIR 10
Match: AT4G36640.2 (Sec14p-like phosphatidylinositol transfer family protein ) HSP 1 Score: 301.6 bits (771), Expect = 6.7e-82 Identity = 136/224 (60.71%), Postives = 177/224 (79.02%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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