CmoCh01G019250 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh01G019250
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	transcription factor MYB44-like
Location	Cmo_Chr01: 13776396 .. 13777073 (+)
RNA-Seq Expression	CmoCh01G019250
Synteny	CmoCh01G019250

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGCATTCATCATTCCTCTTCTTCTCCCTCCACCTCTGAATCCTCCTCTGATGATTCCTCTCTCTCCGGCAAACTCCAGCCGTCTCGAAACTCCGGCGACGCGGATAAAATCAAAGGCCCATGGAGCGCCGAAGAGGATCGGGTCTTGACCCGACTCGTCGAGCGCTACGGCCCCAGGAATTGGTCTTTAATTAGTCGCTATGTAAAGGGCCGCTCTGGAAAATCCTGTCGGTTACGTTGGTGCAACCAGCTTTGCCCTGGTGTCGAACACCGCCCCTTCTCTCCGGCTGAGGATGACGCCATCATCGCCGCCCATTCCCGTTACGGCAACCGCTGGGCCACCATTGCTCGCCTCCTCCCTGGCCGGACCGATAATGCCGTCAAAAACCACTGGAACTCCACTCTGAAGCGAAGAGTTAGAGACCAGCGGAAATCCGCCGTTGATCATAGTTCCGACGTCGTCGTCGGCGGTTCGTTGGTCGCCGTGGATGACGACCCGTTGACGGCGCTGACGCTCGCTACGCCTGGAATCGTTGCTGGAGGTGATGCGGCGGCGGCGTCCAACCGGCGGAGTGAGAGTCTACCGTCCGGGTTCTGGGAAGCGATGAGGGACGTTGTGGCCAGAGAGGTGAGGGAGTACATGACGACGACGTTTTCGGAAAAATCGGGAATTTGA

mRNA sequence

ATGAGCATTCATCATTCCTCTTCTTCTCCCTCCACCTCTGAATCCTCCTCTGATGATTCCTCTCTCTCCGGCAAACTCCAGCCGTCTCGAAACTCCGGCGACGCGGATAAAATCAAAGGCCCATGGAGCGCCGAAGAGGATCGGGTCTTGACCCGACTCGTCGAGCGCTACGGCCCCAGGAATTGGTCTTTAATTAGTCGCTATGTAAAGGGCCGCTCTGGAAAATCCTGTCGGTTACGTTGGTGCAACCAGCTTTGCCCTGGTGTCGAACACCGCCCCTTCTCTCCGGCTGAGGATGACGCCATCATCGCCGCCCATTCCCGTTACGGCAACCGCTGGGCCACCATTGCTCGCCTCCTCCCTGGCCGGACCGATAATGCCGTCAAAAACCACTGGAACTCCACTCTGAAGCGAAGAGTTAGAGACCAGCGGAAATCCGCCGTTGATCATAGTTCCGACGTCGTCGTCGGCGGTTCGTTGGTCGCCGTGGATGACGACCCGTTGACGGCGCTGACGCTCGCTACGCCTGGAATCGTTGCTGGAGGTGATGCGGCGGCGGCGTCCAACCGGCGGAGTGAGAGTCTACCGTCCGGGTTCTGGGAAGCGATGAGGGACGTTGTGGCCAGAGAGGTGAGGGAGTACATGACGACGACGTTTTCGGAAAAATCGGGAATTTGA

Coding sequence (CDS)

ATGAGCATTCATCATTCCTCTTCTTCTCCCTCCACCTCTGAATCCTCCTCTGATGATTCCTCTCTCTCCGGCAAACTCCAGCCGTCTCGAAACTCCGGCGACGCGGATAAAATCAAAGGCCCATGGAGCGCCGAAGAGGATCGGGTCTTGACCCGACTCGTCGAGCGCTACGGCCCCAGGAATTGGTCTTTAATTAGTCGCTATGTAAAGGGCCGCTCTGGAAAATCCTGTCGGTTACGTTGGTGCAACCAGCTTTGCCCTGGTGTCGAACACCGCCCCTTCTCTCCGGCTGAGGATGACGCCATCATCGCCGCCCATTCCCGTTACGGCAACCGCTGGGCCACCATTGCTCGCCTCCTCCCTGGCCGGACCGATAATGCCGTCAAAAACCACTGGAACTCCACTCTGAAGCGAAGAGTTAGAGACCAGCGGAAATCCGCCGTTGATCATAGTTCCGACGTCGTCGTCGGCGGTTCGTTGGTCGCCGTGGATGACGACCCGTTGACGGCGCTGACGCTCGCTACGCCTGGAATCGTTGCTGGAGGTGATGCGGCGGCGGCGTCCAACCGGCGGAGTGAGAGTCTACCGTCCGGGTTCTGGGAAGCGATGAGGGACGTTGTGGCCAGAGAGGTGAGGGAGTACATGACGACGACGTTTTCGGAAAAATCGGGAATTTGA

Protein sequence

MSIHHSSSSPSTSESSSDDSSLSGKLQPSRNSGDADKIKGPWSAEEDRVLTRLVERYGPRNWSLISRYVKGRSGKSCRLRWCNQLCPGVEHRPFSPAEDDAIIAAHSRYGNRWATIARLLPGRTDNAVKNHWNSTLKRRVRDQRKSAVDHSSDVVVGGSLVAVDDDPLTALTLATPGIVAGGDAAAASNRRSESLPSGFWEAMRDVVAREVREYMTTTFSEKSGI

Homology

[Close]

BLAST of CmoCh01G019250 vs. ExPASy Swiss-Prot
Match: Q9SN12 (Transcription factor MYB77 OS=Arabidopsis thaliana OX=3702 GN=MYB77 PE=1 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 1.9e-44
Identity = 78/105 (74.29%), Postives = 91/105 (86.67%), Query Frame = 0


Query: 35  ADKIKGPWSAEEDRVLTRLVERYGPRNWSLISRYVKGRSGKSCRLRWCNQLCPGVEHRPF 94
           AD++KGPWS EED  L R+VE+YGPRNWS IS+ + GRSGKSCRLRWCNQL P VEHRPF
Sbjct: 2   ADRVKGPWSQEEDEQLRRMVEKYGPRNWSAISKSIPGRSGKSCRLRWCNQLSPEVEHRPF 61

Query: 95  SPAEDDAIIAAHSRYGNRWATIARLLPGRTDNAVKNHWNSTLKRR 140
           SP ED+ I+ A +++GN+WATIARLL GRTDNAVKNHWNSTLKR+
Sbjct: 62  SPEEDETIVTARAQFGNKWATIARLLNGRTDNAVKNHWNSTLKRK 106

[Close]

BLAST of CmoCh01G019250 vs. ExPASy Swiss-Prot
Match: Q9FDW1 (Transcription factor MYB44 OS=Arabidopsis thaliana OX=3702 GN=MYB44 PE=1 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 2.5e-44
Identity = 88/154 (57.14%), Postives = 105/154 (68.18%), Query Frame = 0


Query: 35  ADKIKGPWSAEEDRVLTRLVERYGPRNWSLISRYVKGRSGKSCRLRWCNQLCPGVEHRPF 94
           AD+IKGPWS EED  L RLV +YGPRNW++IS+ + GRSGKSCRLRWCNQL P VEHRPF
Sbjct: 2   ADRIKGPWSPEEDEQLRRLVVKYGPRNWTVISKSIPGRSGKSCRLRWCNQLSPQVEHRPF 61

Query: 95  SPAEDDAIIAAHSRYGNRWATIARLLPGRTDNAVKNHWNSTLKRRVRDQRKSAVDHSSDV 154
           S  ED+ I  AH+++GN+WATIARLL GRTDNAVKNHWNSTLKR+         D S D 
Sbjct: 62  SAEEDETIARAHAQFGNKWATIARLLNGRTDNAVKNHWNSTLKRKCGGYDHRGYDGSEDH 121

Query: 155 VVGGSLVAVDDDPLTALTLATPGIVAGGDAAAAS 189
                 V+    P+      +PG   G D + +S
Sbjct: 122 RPVKRSVSAGSPPVVTGLYMSPGSPTGSDVSDSS 155

[Close]

BLAST of CmoCh01G019250 vs. ExPASy Swiss-Prot
Match: O23160 (Transcription factor MYB73 OS=Arabidopsis thaliana OX=3702 GN=MYB73 PE=1 SV=1)

HSP 1 Score: 174.9 bits (442), Expect = 1.1e-42
Identity = 76/104 (73.08%), Postives = 91/104 (87.50%), Query Frame = 0


Query: 36  DKIKGPWSAEEDRVLTRLVERYGPRNWSLISRYVKGRSGKSCRLRWCNQLCPGVEHRPFS 95
           ++IKGPWS EED +L RLV+++GPRNWSLIS+ + GRSGKSCRLRWCNQL P VEHR FS
Sbjct: 10  ERIKGPWSPEEDDLLQRLVQKHGPRNWSLISKSIPGRSGKSCRLRWCNQLSPEVEHRAFS 69

Query: 96  PAEDDAIIAAHSRYGNRWATIARLLPGRTDNAVKNHWNSTLKRR 140
             ED+ II AH+R+GN+WATI+RLL GRTDNA+KNHWNSTLKR+
Sbjct: 70  QEEDETIIRAHARFGNKWATISRLLNGRTDNAIKNHWNSTLKRK 113

[Close]

BLAST of CmoCh01G019250 vs. ExPASy Swiss-Prot
Match: Q42575 (Transcription factor MYB1 OS=Arabidopsis thaliana OX=3702 GN=MYB1 PE=2 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 7.0e-39
Identity = 86/170 (50.59%), Postives = 109/170 (64.12%), Query Frame = 0


Query: 33  GDADKIKGPWSAEEDRVLTRLVERYGPRNWSLISRYVKGRSGKSCRLRWCNQLCPGVEHR 92
           G  D++KGPWS EED VL+ LV+R G RNWS I+R + GRSGKSCRLRWCNQL P +   
Sbjct: 49  GRRDRVKGPWSKEEDDVLSELVKRLGARNWSFIARSIPGRSGKSCRLRWCNQLNPNLIRN 108

Query: 93  PFSPAEDDAIIAAHSRYGNRWATIARLLPGRTDNAVKNHWNSTLKRRVRDQRKSAVDHSS 152
            F+  ED AIIAAH+ +GN+WA IA+LLPGRTDNA+KNHWNS L+RR  D  K+    + 
Sbjct: 109 SFTEVEDQAIIAAHAIHGNKWAVIAKLLPGRTDNAIKNHWNSALRRRFIDFEKAKNIGTG 168

Query: 153 DVVVGGS------LVAVDDDPLTA---LTLATPGIVAGGDAAAASNRRSE 194
            +VV  S       VA  ++ L++     + TP +   G  A  S   SE
Sbjct: 169 SLVVDDSGFDRTTTVASSEETLSSGGGCHVTTPIVSPEGKEATTSMEMSE 218

[Close]

BLAST of CmoCh01G019250 vs. ExPASy Swiss-Prot
Match: O04192 (Transcription factor MYB25 OS=Arabidopsis thaliana OX=3702 GN=MYB25 PE=2 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 8.1e-35
Identity = 76/155 (49.03%), Postives = 105/155 (67.74%), Query Frame = 0


Query: 6   SSSSPSTSESSSDDSSLSGKL----QPSRNSGDADKIKGPWSAEEDRVLTRLVERYGPRN 65
           SS +P  S  ++   ++  +L    +   N G   K+KGPW  E+D  LTRLV+  GPRN
Sbjct: 13  SSRNPCKSFENAIHKAVEAELAELAKSDANGGGKSKVKGPWLPEQDEALTRLVKMCGPRN 72

Query: 66  WSLISRYVKGRSGKSCRLRWCNQLCPGVEHRPFSPAEDDAIIAAHSRYGNRWATIARLLP 125
           W+LISR + GRSGKSCRLRWCNQL P ++ +PFS  E+  I++A +  GN+W+ IA+LLP
Sbjct: 73  WNLISRGIPGRSGKSCRLRWCNQLDPILKRKPFSDEEEHMIMSAQAVLGNKWSVIAKLLP 132

Query: 126 GRTDNAVKNHWNSTLKRRVRDQRKSAVDHSSDVVV 157
           GRTDNA+KNHWNS L+R+  +Q K  +  S+  +V
Sbjct: 133 GRTDNAIKNHWNSNLRRKPAEQWKIPLLMSNTEIV 167

[Close]

BLAST of CmoCh01G019250 vs. ExPASy TrEMBL
Match: A0A6J1FM32 (transcription factor MYB44-like OS=Cucurbita moschata OX=3662 GN=LOC111446453 PE=4 SV=1)

HSP 1 Score: 444.1 bits (1141), Expect = 3.4e-121
Identity = 225/225 (100.00%), Postives = 225/225 (100.00%), Query Frame = 0


Query: 1   MSIHHSSSSPSTSESSSDDSSLSGKLQPSRNSGDADKIKGPWSAEEDRVLTRLVERYGPR 60
           MSIHHSSSSPSTSESSSDDSSLSGKLQPSRNSGDADKIKGPWSAEEDRVLTRLVERYGPR
Sbjct: 1   MSIHHSSSSPSTSESSSDDSSLSGKLQPSRNSGDADKIKGPWSAEEDRVLTRLVERYGPR 60

Query: 61  NWSLISRYVKGRSGKSCRLRWCNQLCPGVEHRPFSPAEDDAIIAAHSRYGNRWATIARLL 120
           NWSLISRYVKGRSGKSCRLRWCNQLCPGVEHRPFSPAEDDAIIAAHSRYGNRWATIARLL
Sbjct: 61  NWSLISRYVKGRSGKSCRLRWCNQLCPGVEHRPFSPAEDDAIIAAHSRYGNRWATIARLL 120

Query: 121 PGRTDNAVKNHWNSTLKRRVRDQRKSAVDHSSDVVVGGSLVAVDDDPLTALTLATPGIVA 180
           PGRTDNAVKNHWNSTLKRRVRDQRKSAVDHSSDVVVGGSLVAVDDDPLTALTLATPGIVA
Sbjct: 121 PGRTDNAVKNHWNSTLKRRVRDQRKSAVDHSSDVVVGGSLVAVDDDPLTALTLATPGIVA 180

Query: 181 GGDAAAASNRRSESLPSGFWEAMRDVVAREVREYMTTTFSEKSGI 226
           GGDAAAASNRRSESLPSGFWEAMRDVVAREVREYMTTTFSEKSGI
Sbjct: 181 GGDAAAASNRRSESLPSGFWEAMRDVVAREVREYMTTTFSEKSGI 225

[Close]

BLAST of CmoCh01G019250 vs. ExPASy TrEMBL
Match: A0A6J1J4G1 (transcription factor MYB44-like OS=Cucurbita maxima OX=3661 GN=LOC111481160 PE=4 SV=1)

HSP 1 Score: 429.9 bits (1104), Expect = 6.7e-117
Identity = 217/224 (96.88%), Postives = 219/224 (97.77%), Query Frame = 0


Query: 1   MSIHHSSSSPSTSESSSDDSSLSGKLQPSRNSGDADKIKGPWSAEEDRVLTRLVERYGPR 60
           MSIHHSSSSPSTSESSSDDSSLSGKLQPSRNSGDADKIKGPWSAEEDRVLTRLVERYGPR
Sbjct: 1   MSIHHSSSSPSTSESSSDDSSLSGKLQPSRNSGDADKIKGPWSAEEDRVLTRLVERYGPR 60

Query: 61  NWSLISRYVKGRSGKSCRLRWCNQLCPGVEHRPFSPAEDDAIIAAHSRYGNRWATIARLL 120
           NWSLISRYVKGRSGKSCRLRWCNQLCPGVEHRPFSPAED+AIIAAHSRYGNRWATIARLL
Sbjct: 61  NWSLISRYVKGRSGKSCRLRWCNQLCPGVEHRPFSPAEDEAIIAAHSRYGNRWATIARLL 120

Query: 121 PGRTDNAVKNHWNSTLKRRVRDQRKSAVDHSSDVVVGGSLVAVDDDPLTALTLATPGIVA 180
           PGRTDNAVKNHWNSTLKRRVRDQ KSAVDHSSD+V GGSLVAVDDDPLTALTLATPGIVA
Sbjct: 121 PGRTDNAVKNHWNSTLKRRVRDQGKSAVDHSSDIVGGGSLVAVDDDPLTALTLATPGIVA 180

Query: 181 GGDAAAASNRRSESLPSGFWEAMRDVVAREVREYMTTTFSEKSG 225
           GGD AAASNRRSESLPSGFWEAMRDVVAREVREYMTTTFSE  G
Sbjct: 181 GGDVAAASNRRSESLPSGFWEAMRDVVAREVREYMTTTFSENRG 224

[Close]

BLAST of CmoCh01G019250 vs. ExPASy TrEMBL
Match: A0A5A7V9U0 (Transcriptional activator Myb-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G003670 PE=4 SV=1)

HSP 1 Score: 361.3 bits (926), Expect = 2.9e-96
Identity = 186/225 (82.67%), Postives = 200/225 (88.89%), Query Frame = 0


Query: 1   MSIHHSSSSPSTSESSSDDSSLSGKLQPSRNSGDADKIKGPWSAEEDRVLTRLVERYGPR 60
           M+IH+ SSSPSTSESSS DSSLSGK  P + S   DKIKGPWSAEEDRVLTRLVERYGPR
Sbjct: 1   MNIHNFSSSPSTSESSSSDSSLSGK-PPPQTSPIPDKIKGPWSAEEDRVLTRLVERYGPR 60

Query: 61  NWSLISRYVKGRSGKSCRLRWCNQLCPGVEHRPFSPAEDDAIIAAHSRYGNRWATIARLL 120
           NWSLISRYVKGRSGKSCRLRWCNQLCPGVEHRPFSPAEDDAIIAAHSRYGNRWATIARLL
Sbjct: 61  NWSLISRYVKGRSGKSCRLRWCNQLCPGVEHRPFSPAEDDAIIAAHSRYGNRWATIARLL 120

Query: 121 PGRTDNAVKNHWNSTLKRRVRDQRK-SAVDHSSDVVVGGSLVAVDDDPLTALTLATPGIV 180
           PGRTDNAVKNHWNSTLKRRV+D R+ S+ +H+SDV   GS +AVDDDPLTALTLATPGIV
Sbjct: 121 PGRTDNAVKNHWNSTLKRRVKDDRRNSSSNHTSDVGGSGSFLAVDDDPLTALTLATPGIV 180

Query: 181 AGGDAAAASNRRSESLPSGFWEAMRDVVAREVREYMTTTFSEKSG 225
            GG+    ++R SESLP+GFWE M+DVVAREVREYMTTTFSE  G
Sbjct: 181 GGGEVVRETDRVSESLPTGFWEVMKDVVAREVREYMTTTFSENPG 224

[Close]

BLAST of CmoCh01G019250 vs. ExPASy TrEMBL
Match: A0A1S3BV53 (transcriptional activator Myb-like OS=Cucumis melo OX=3656 GN=LOC103493514 PE=4 SV=1)

HSP 1 Score: 361.3 bits (926), Expect = 2.9e-96
Identity = 186/225 (82.67%), Postives = 200/225 (88.89%), Query Frame = 0


Query: 1   MSIHHSSSSPSTSESSSDDSSLSGKLQPSRNSGDADKIKGPWSAEEDRVLTRLVERYGPR 60
           M+IH+ SSSPSTSESSS DSSLSGK  P + S   DKIKGPWSAEEDRVLTRLVERYGPR
Sbjct: 1   MNIHNFSSSPSTSESSSSDSSLSGK-PPPQTSPIPDKIKGPWSAEEDRVLTRLVERYGPR 60

Query: 61  NWSLISRYVKGRSGKSCRLRWCNQLCPGVEHRPFSPAEDDAIIAAHSRYGNRWATIARLL 120
           NWSLISRYVKGRSGKSCRLRWCNQLCPGVEHRPFSPAEDDAIIAAHSRYGNRWATIARLL
Sbjct: 61  NWSLISRYVKGRSGKSCRLRWCNQLCPGVEHRPFSPAEDDAIIAAHSRYGNRWATIARLL 120

Query: 121 PGRTDNAVKNHWNSTLKRRVRDQRK-SAVDHSSDVVVGGSLVAVDDDPLTALTLATPGIV 180
           PGRTDNAVKNHWNSTLKRRV+D R+ S+ +H+SDV   GS +AVDDDPLTALTLATPGIV
Sbjct: 121 PGRTDNAVKNHWNSTLKRRVKDDRRNSSSNHTSDVGGSGSFLAVDDDPLTALTLATPGIV 180

Query: 181 AGGDAAAASNRRSESLPSGFWEAMRDVVAREVREYMTTTFSEKSG 225
            GG+    ++R SESLP+GFWE M+DVVAREVREYMTTTFSE  G
Sbjct: 181 GGGEVVRETDRVSESLPTGFWEVMKDVVAREVREYMTTTFSENPG 224

[Close]

BLAST of CmoCh01G019250 vs. ExPASy TrEMBL
Match: A0A6J1CD16 (transcription factor MYB44-like OS=Momordica charantia OX=3673 GN=LOC111010546 PE=4 SV=1)

HSP 1 Score: 360.1 bits (923), Expect = 6.5e-96
Identity = 186/231 (80.52%), Postives = 202/231 (87.45%), Query Frame = 0


Query: 4   HHSSSSPSTSESSSDDSSLSGKLQPSRNSGDADKIKGPWSAEEDRVLTRLVERYGPRNWS 63
           ++SSSSPSTSESSS DSSLSGK +P   +G  DKIKGPWSAEEDR+LTRLVERYGPRNWS
Sbjct: 12  NNSSSSPSTSESSSSDSSLSGKPRPRATAGGPDKIKGPWSAEEDRILTRLVERYGPRNWS 71

Query: 64  LISRYVKGRSGKSCRLRWCNQLCPGVEHRPFSPAEDDAIIAAHSRYGNRWATIARLLPGR 123
           LISRYVKGRSGKSCRLRWCNQLCPGVEHRPFSPAEDDAIIAAH+RYGNRWATIARLLPGR
Sbjct: 72  LISRYVKGRSGKSCRLRWCNQLCPGVEHRPFSPAEDDAIIAAHARYGNRWATIARLLPGR 131

Query: 124 TDNAVKNHWNSTLKRRVRDQRKSAVD-----HSSDVVVGGSLV-----AVDDDPLTALTL 183
           TDNAVKNHWNSTLKRRVR+QR+SA +      ++DVV GGS       AVDDDPLTALTL
Sbjct: 132 TDNAVKNHWNSTLKRRVREQRRSAGEFAGGNDNADVVGGGSSASAPFGAVDDDPLTALTL 191

Query: 184 ATPGIVAGGDAAAASNRRSESLPSGFWEAMRDVVAREVREYMTTTFSEKSG 225
           ATPGI +G D A AS+ RSE+LP+GFWE MRDV+AREVREYMTTTFSE SG
Sbjct: 192 ATPGIGSGSDVAPASDHRSETLPAGFWEMMRDVIAREVREYMTTTFSENSG 242

[Close]

BLAST of CmoCh01G019250 vs. NCBI nr
Match: XP_022941049.1 (transcription factor MYB44-like [Cucurbita moschata])

HSP 1 Score: 444.1 bits (1141), Expect = 7.1e-121
Identity = 225/225 (100.00%), Postives = 225/225 (100.00%), Query Frame = 0


Query: 1   MSIHHSSSSPSTSESSSDDSSLSGKLQPSRNSGDADKIKGPWSAEEDRVLTRLVERYGPR 60
           MSIHHSSSSPSTSESSSDDSSLSGKLQPSRNSGDADKIKGPWSAEEDRVLTRLVERYGPR
Sbjct: 1   MSIHHSSSSPSTSESSSDDSSLSGKLQPSRNSGDADKIKGPWSAEEDRVLTRLVERYGPR 60

Query: 61  NWSLISRYVKGRSGKSCRLRWCNQLCPGVEHRPFSPAEDDAIIAAHSRYGNRWATIARLL 120
           NWSLISRYVKGRSGKSCRLRWCNQLCPGVEHRPFSPAEDDAIIAAHSRYGNRWATIARLL
Sbjct: 61  NWSLISRYVKGRSGKSCRLRWCNQLCPGVEHRPFSPAEDDAIIAAHSRYGNRWATIARLL 120

Query: 121 PGRTDNAVKNHWNSTLKRRVRDQRKSAVDHSSDVVVGGSLVAVDDDPLTALTLATPGIVA 180
           PGRTDNAVKNHWNSTLKRRVRDQRKSAVDHSSDVVVGGSLVAVDDDPLTALTLATPGIVA
Sbjct: 121 PGRTDNAVKNHWNSTLKRRVRDQRKSAVDHSSDVVVGGSLVAVDDDPLTALTLATPGIVA 180

Query: 181 GGDAAAASNRRSESLPSGFWEAMRDVVAREVREYMTTTFSEKSGI 226
           GGDAAAASNRRSESLPSGFWEAMRDVVAREVREYMTTTFSEKSGI
Sbjct: 181 GGDAAAASNRRSESLPSGFWEAMRDVVAREVREYMTTTFSEKSGI 225

[Close]

BLAST of CmoCh01G019250 vs. NCBI nr
Match: KAG6608498.1 (Transcription factor MYB44, partial [Cucurbita argyrosperma subsp. sororia] >KAG7037824.1 Transcription factor MYB44, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 441.4 bits (1134), Expect = 4.6e-120
Identity = 223/225 (99.11%), Postives = 224/225 (99.56%), Query Frame = 0


Query: 1   MSIHHSSSSPSTSESSSDDSSLSGKLQPSRNSGDADKIKGPWSAEEDRVLTRLVERYGPR 60
           MSIHHSSSSPSTSESSSDDSSLSGKLQPSRNSGDADKIKGPWSAEEDRVLTRLVERYGPR
Sbjct: 1   MSIHHSSSSPSTSESSSDDSSLSGKLQPSRNSGDADKIKGPWSAEEDRVLTRLVERYGPR 60

Query: 61  NWSLISRYVKGRSGKSCRLRWCNQLCPGVEHRPFSPAEDDAIIAAHSRYGNRWATIARLL 120
           NWSLISRYVKGRSGKSCRLRWCNQLCPGVEHRPFSPAEDDAIIAAHSRYGNRWATIARLL
Sbjct: 61  NWSLISRYVKGRSGKSCRLRWCNQLCPGVEHRPFSPAEDDAIIAAHSRYGNRWATIARLL 120

Query: 121 PGRTDNAVKNHWNSTLKRRVRDQRKSAVDHSSDVVVGGSLVAVDDDPLTALTLATPGIVA 180
           PGRTDNAVKNHWNSTLKRRVRDQRKSAVDHSSDVVVGGSLVAVDDDPLTALTLATPGIVA
Sbjct: 121 PGRTDNAVKNHWNSTLKRRVRDQRKSAVDHSSDVVVGGSLVAVDDDPLTALTLATPGIVA 180

Query: 181 GGDAAAASNRRSESLPSGFWEAMRDVVAREVREYMTTTFSEKSGI 226
           GGD AAASNRRSESLPSGFWEAMRDVVAREV+EYMTTTFSEKSGI
Sbjct: 181 GGDVAAASNRRSESLPSGFWEAMRDVVAREVKEYMTTTFSEKSGI 225

[Close]

BLAST of CmoCh01G019250 vs. NCBI nr
Match: XP_023525388.1 (transcription factor MYB44-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 435.6 bits (1119), Expect = 2.5e-118
Identity = 221/225 (98.22%), Postives = 222/225 (98.67%), Query Frame = 0


Query: 1   MSIHHSSSSPSTSESSSDDSSLSGKLQPSRNSGDADKIKGPWSAEEDRVLTRLVERYGPR 60
           MSIHHSSSSPSTSESSSDDSSLSGKLQPSRNSGDADKIKGPWSAEEDRVLTRLVERYGPR
Sbjct: 1   MSIHHSSSSPSTSESSSDDSSLSGKLQPSRNSGDADKIKGPWSAEEDRVLTRLVERYGPR 60

Query: 61  NWSLISRYVKGRSGKSCRLRWCNQLCPGVEHRPFSPAEDDAIIAAHSRYGNRWATIARLL 120
           NWSLISRYVKGRSGKSCRLRWCNQLCPGVEHRPFSPAEDDAIIAAHSRYGNRWATIARLL
Sbjct: 61  NWSLISRYVKGRSGKSCRLRWCNQLCPGVEHRPFSPAEDDAIIAAHSRYGNRWATIARLL 120

Query: 121 PGRTDNAVKNHWNSTLKRRVRDQRKSAVDHSSDVVVGGSLVAVDDDPLTALTLATPGIVA 180
           PGRTDNAVKNHWNSTLKRRVRDQRKSAVDHSSDVVV  SLVAVDDDPLTALTLATPGIVA
Sbjct: 121 PGRTDNAVKNHWNSTLKRRVRDQRKSAVDHSSDVVVSRSLVAVDDDPLTALTLATPGIVA 180

Query: 181 GGDAAAASNRRSESLPSGFWEAMRDVVAREVREYMTTTFSEKSGI 226
           GG+ AAASNRRSESLPSGFWEAMRDVVAREVREYMTTTFSEKSGI
Sbjct: 181 GGEVAAASNRRSESLPSGFWEAMRDVVAREVREYMTTTFSEKSGI 225

[Close]

BLAST of CmoCh01G019250 vs. NCBI nr
Match: XP_022982283.1 (transcription factor MYB44-like [Cucurbita maxima])

HSP 1 Score: 429.9 bits (1104), Expect = 1.4e-116
Identity = 217/224 (96.88%), Postives = 219/224 (97.77%), Query Frame = 0


Query: 1   MSIHHSSSSPSTSESSSDDSSLSGKLQPSRNSGDADKIKGPWSAEEDRVLTRLVERYGPR 60
           MSIHHSSSSPSTSESSSDDSSLSGKLQPSRNSGDADKIKGPWSAEEDRVLTRLVERYGPR
Sbjct: 1   MSIHHSSSSPSTSESSSDDSSLSGKLQPSRNSGDADKIKGPWSAEEDRVLTRLVERYGPR 60

Query: 61  NWSLISRYVKGRSGKSCRLRWCNQLCPGVEHRPFSPAEDDAIIAAHSRYGNRWATIARLL 120
           NWSLISRYVKGRSGKSCRLRWCNQLCPGVEHRPFSPAED+AIIAAHSRYGNRWATIARLL
Sbjct: 61  NWSLISRYVKGRSGKSCRLRWCNQLCPGVEHRPFSPAEDEAIIAAHSRYGNRWATIARLL 120

Query: 121 PGRTDNAVKNHWNSTLKRRVRDQRKSAVDHSSDVVVGGSLVAVDDDPLTALTLATPGIVA 180
           PGRTDNAVKNHWNSTLKRRVRDQ KSAVDHSSD+V GGSLVAVDDDPLTALTLATPGIVA
Sbjct: 121 PGRTDNAVKNHWNSTLKRRVRDQGKSAVDHSSDIVGGGSLVAVDDDPLTALTLATPGIVA 180

Query: 181 GGDAAAASNRRSESLPSGFWEAMRDVVAREVREYMTTTFSEKSG 225
           GGD AAASNRRSESLPSGFWEAMRDVVAREVREYMTTTFSE  G
Sbjct: 181 GGDVAAASNRRSESLPSGFWEAMRDVVAREVREYMTTTFSENRG 224

[Close]

BLAST of CmoCh01G019250 vs. NCBI nr
Match: XP_038899055.1 (transcription factor MYB44-like [Benincasa hispida])

HSP 1 Score: 372.5 bits (955), Expect = 2.6e-99
Identity = 189/223 (84.75%), Postives = 200/223 (89.69%), Query Frame = 0


Query: 2   SIHHSSSSPSTSESSSDDSSLSGKLQPSRNSGDADKIKGPWSAEEDRVLTRLVERYGPRN 61
           +IH+ SSSPSTSESSS DSSLSGK  P  NS   DKIKGPWSAEEDRVLTRLVERYGPRN
Sbjct: 3   NIHNFSSSPSTSESSSSDSSLSGK-PPPPNSSVPDKIKGPWSAEEDRVLTRLVERYGPRN 62

Query: 62  WSLISRYVKGRSGKSCRLRWCNQLCPGVEHRPFSPAEDDAIIAAHSRYGNRWATIARLLP 121
           WSLISRYVKGRSGKSCRLRWCNQLCPGVEHRPFSPAEDDAIIAAHSRYGNRWATIARLLP
Sbjct: 63  WSLISRYVKGRSGKSCRLRWCNQLCPGVEHRPFSPAEDDAIIAAHSRYGNRWATIARLLP 122

Query: 122 GRTDNAVKNHWNSTLKRRVRDQRKSAVDHSSDVVVGGSLVAVDDDPLTALTLATPGIVAG 181
           GRTDNAVKNHWNSTLKRRVRD R SA +H+SD   GGS +AV+DDPLTALTLATPG+VAG
Sbjct: 123 GRTDNAVKNHWNSTLKRRVRDDRNSAGNHTSDAAAGGSFLAVNDDPLTALTLATPGMVAG 182

Query: 182 GDAAAASNRRSESLPSGFWEAMRDVVAREVREYMTTTFSEKSG 225
           G+    S+RRSESLP+GFWE M+DVVAREVREYMTTTFSE  G
Sbjct: 183 GEVVPESDRRSESLPAGFWEVMKDVVAREVREYMTTTFSENPG 224

[Close]

BLAST of CmoCh01G019250 vs. TAIR 10
Match: AT3G50060.1 (myb domain protein 77 )

HSP 1 Score: 180.6 bits (457), Expect = 1.4e-45
Identity = 78/105 (74.29%), Postives = 91/105 (86.67%), Query Frame = 0


Query: 35  ADKIKGPWSAEEDRVLTRLVERYGPRNWSLISRYVKGRSGKSCRLRWCNQLCPGVEHRPF 94
           AD++KGPWS EED  L R+VE+YGPRNWS IS+ + GRSGKSCRLRWCNQL P VEHRPF
Sbjct: 2   ADRVKGPWSQEEDEQLRRMVEKYGPRNWSAISKSIPGRSGKSCRLRWCNQLSPEVEHRPF 61

Query: 95  SPAEDDAIIAAHSRYGNRWATIARLLPGRTDNAVKNHWNSTLKRR 140
           SP ED+ I+ A +++GN+WATIARLL GRTDNAVKNHWNSTLKR+
Sbjct: 62  SPEEDETIVTARAQFGNKWATIARLLNGRTDNAVKNHWNSTLKRK 106

[Close]

BLAST of CmoCh01G019250 vs. TAIR 10
Match: AT5G67300.1 (myb domain protein r1 )

HSP 1 Score: 180.3 bits (456), Expect = 1.8e-45
Identity = 88/154 (57.14%), Postives = 105/154 (68.18%), Query Frame = 0


Query: 35  ADKIKGPWSAEEDRVLTRLVERYGPRNWSLISRYVKGRSGKSCRLRWCNQLCPGVEHRPF 94
           AD+IKGPWS EED  L RLV +YGPRNW++IS+ + GRSGKSCRLRWCNQL P VEHRPF
Sbjct: 2   ADRIKGPWSPEEDEQLRRLVVKYGPRNWTVISKSIPGRSGKSCRLRWCNQLSPQVEHRPF 61

Query: 95  SPAEDDAIIAAHSRYGNRWATIARLLPGRTDNAVKNHWNSTLKRRVRDQRKSAVDHSSDV 154
           S  ED+ I  AH+++GN+WATIARLL GRTDNAVKNHWNSTLKR+         D S D 
Sbjct: 62  SAEEDETIARAHAQFGNKWATIARLLNGRTDNAVKNHWNSTLKRKCGGYDHRGYDGSEDH 121

Query: 155 VVGGSLVAVDDDPLTALTLATPGIVAGGDAAAAS 189
                 V+    P+      +PG   G D + +S
Sbjct: 122 RPVKRSVSAGSPPVVTGLYMSPGSPTGSDVSDSS 155

[Close]

BLAST of CmoCh01G019250 vs. TAIR 10
Match: AT4G37260.1 (myb domain protein 73 )

HSP 1 Score: 174.9 bits (442), Expect = 7.5e-44
Identity = 76/104 (73.08%), Postives = 91/104 (87.50%), Query Frame = 0


Query: 36  DKIKGPWSAEEDRVLTRLVERYGPRNWSLISRYVKGRSGKSCRLRWCNQLCPGVEHRPFS 95
           ++IKGPWS EED +L RLV+++GPRNWSLIS+ + GRSGKSCRLRWCNQL P VEHR FS
Sbjct: 10  ERIKGPWSPEEDDLLQRLVQKHGPRNWSLISKSIPGRSGKSCRLRWCNQLSPEVEHRAFS 69

Query: 96  PAEDDAIIAAHSRYGNRWATIARLLPGRTDNAVKNHWNSTLKRR 140
             ED+ II AH+R+GN+WATI+RLL GRTDNA+KNHWNSTLKR+
Sbjct: 70  QEEDETIIRAHARFGNKWATISRLLNGRTDNAIKNHWNSTLKRK 113

[Close]

BLAST of CmoCh01G019250 vs. TAIR 10
Match: AT2G23290.1 (myb domain protein 70 )

HSP 1 Score: 173.3 bits (438), Expect = 2.2e-43
Identity = 90/175 (51.43%), Postives = 111/175 (63.43%), Query Frame = 0


Query: 34  DADKIKGPWSAEEDRVLTRLVERYGPRNWSLISRYVKGRSGKSCRLRWCNQLCPGVEHRP 93
           + D+IKGPWS EED +L  LV+++GPRNWSLIS+ + GRSGKSCRLRWCNQL P VEHR 
Sbjct: 8   EMDRIKGPWSPEEDDLLQSLVQKHGPRNWSLISKSIPGRSGKSCRLRWCNQLSPEVEHRG 67

Query: 94  FSPAEDDAIIAAHSRYGNRWATIARLLPGRTDNAVKNHWNSTLKRRVR-----DQRKSAV 153
           F+  EDD II AH+R+GN+WATIARLL GRTDNA+KNHWNSTLKR+        +   + 
Sbjct: 68  FTAEEDDTIILAHARFGNKWATIARLLNGRTDNAIKNHWNSTLKRKCSGGGGGGEEGQSC 127

Query: 154 DHSSDVVVGGSLVAVDDDPLTALTLATPGIV-------AGGDAAAASNRRSESLP 197
           D   +    G+L   D+ PL        G+V        G D +  S      LP
Sbjct: 128 DFGGNGGYDGNL--TDEKPLKRRASGGGGVVVVTALSPTGSDVSEQSQSSGSVLP 180

[Close]

BLAST of CmoCh01G019250 vs. TAIR 10
Match: AT3G09230.1 (myb domain protein 1 )

HSP 1 Score: 162.2 bits (409), Expect = 5.0e-40
Identity = 86/170 (50.59%), Postives = 109/170 (64.12%), Query Frame = 0


Query: 33  GDADKIKGPWSAEEDRVLTRLVERYGPRNWSLISRYVKGRSGKSCRLRWCNQLCPGVEHR 92
           G  D++KGPWS EED VL+ LV+R G RNWS I+R + GRSGKSCRLRWCNQL P +   
Sbjct: 49  GRRDRVKGPWSKEEDDVLSELVKRLGARNWSFIARSIPGRSGKSCRLRWCNQLNPNLIRN 108

Query: 93  PFSPAEDDAIIAAHSRYGNRWATIARLLPGRTDNAVKNHWNSTLKRRVRDQRKSAVDHSS 152
            F+  ED AIIAAH+ +GN+WA IA+LLPGRTDNA+KNHWNS L+RR  D  K+    + 
Sbjct: 109 SFTEVEDQAIIAAHAIHGNKWAVIAKLLPGRTDNAIKNHWNSALRRRFIDFEKAKNIGTG 168

Query: 153 DVVVGGS------LVAVDDDPLTA---LTLATPGIVAGGDAAAASNRRSE 194
            +VV  S       VA  ++ L++     + TP +   G  A  S   SE
Sbjct: 169 SLVVDDSGFDRTTTVASSEETLSSGGGCHVTTPIVSPEGKEATTSMEMSE 218

The following BLAST results are available for this feature:

BLAST of CmoCh01G019250 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SN12	1.9e-44	74.29	Transcription factor MYB77 OS=Arabidopsis thaliana OX=3702 GN=MYB77 PE=1 SV=1	[more]
Q9FDW1	2.5e-44	57.14	Transcription factor MYB44 OS=Arabidopsis thaliana OX=3702 GN=MYB44 PE=1 SV=1	[more]
O23160	1.1e-42	73.08	Transcription factor MYB73 OS=Arabidopsis thaliana OX=3702 GN=MYB73 PE=1 SV=1	[more]
Q42575	7.0e-39	50.59	Transcription factor MYB1 OS=Arabidopsis thaliana OX=3702 GN=MYB1 PE=2 SV=1	[more]
O04192	8.1e-35	49.03	Transcription factor MYB25 OS=Arabidopsis thaliana OX=3702 GN=MYB25 PE=2 SV=1	[more]

BLAST of CmoCh01G019250 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FM32	3.4e-121	100.00	transcription factor MYB44-like OS=Cucurbita moschata OX=3662 GN=LOC111446453 PE...	[more]
A0A6J1J4G1	6.7e-117	96.88	transcription factor MYB44-like OS=Cucurbita maxima OX=3661 GN=LOC111481160 PE=4...	[more]
A0A5A7V9U0	2.9e-96	82.67	Transcriptional activator Myb-like OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A1S3BV53	2.9e-96	82.67	transcriptional activator Myb-like OS=Cucumis melo OX=3656 GN=LOC103493514 PE=4 ...	[more]
A0A6J1CD16	6.5e-96	80.52	transcription factor MYB44-like OS=Momordica charantia OX=3673 GN=LOC111010546 P...	[more]

BLAST of CmoCh01G019250 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022941049.1	7.1e-121	100.00	transcription factor MYB44-like [Cucurbita moschata]	[more]
KAG6608498.1	4.6e-120	99.11	Transcription factor MYB44, partial [Cucurbita argyrosperma subsp. sororia] >KAG...	[more]
XP_023525388.1	2.5e-118	98.22	transcription factor MYB44-like [Cucurbita pepo subsp. pepo]	[more]
XP_022982283.1	1.4e-116	96.88	transcription factor MYB44-like [Cucurbita maxima]	[more]
XP_038899055.1	2.6e-99	84.75	transcription factor MYB44-like [Benincasa hispida]	[more]

BLAST of CmoCh01G019250 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G50060.1	1.4e-45	74.29	myb domain protein 77	[more]
AT5G67300.1	1.8e-45	57.14	myb domain protein r1	[more]
AT4G37260.1	7.5e-44	73.08	myb domain protein 73	[more]
AT2G23290.1	2.2e-43	51.43	myb domain protein 70	[more]
AT3G09230.1	5.0e-40	50.59	myb domain protein 1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 90..138 e-value: 4.0E-15 score: 66.2 coord: 38..87 e-value: 2.6E-14 score: 63.5
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 34..85 score: 11.787994
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 86..136 score: 9.001018
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 93..136 e-value: 2.55612E-12 score: 57.5854
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 41..83 e-value: 2.10119E-15 score: 65.6746
None	No IPR available	GENE3D	1.10.10.60		coord: 92..154 e-value: 1.8E-21 score: 77.9
None	No IPR available	GENE3D	1.10.10.60		coord: 38..90 e-value: 1.2E-21 score: 78.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..30
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..40
None	No IPR available	PANTHER	PTHR45614	MYB PROTEIN-RELATED	coord: 1..209
None	No IPR available	PANTHER	PTHR45614:SF131	SUBFAMILY NOT NAMED	coord: 1..209
IPR017930	Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 39..84 e-value: 2.5E-15 score: 56.4 coord: 93..134 e-value: 1.0E-13 score: 51.3
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 34..89 score: 25.54982
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 91..140 score: 22.985233
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 36..132

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh01G019250.1	CmoCh01G019250.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
cellular_component	GO:0005634	nucleus
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding