Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCTCAACGAGATTGGCATAAGAATCCGAAAGGAAAAGAGAATATGAGTTCTGGAGGAGGAATCGCCGCTTGGAATGTGTTTGACAATGTGAAGACCACAACGAAGACGCCTGAAGCTCTAATCGCGGAGATCAATACTGCAATTGCAAATCTCGAATATGCTCGATCAACCGCCTTCTTAGAATCTCCAATTTCTCCCACTCCACAAGATAGGAGCTCTGGTGTGAGCTCAAGTACTCAGTATGATGCACGAATTGCAGATGAAGCGTACAAGGCAGGGTGTGCGGCATTGGCTGTTGGTAAACTCGATGAGGCTCTTCATTCGTTGAATGTCTCTCTTTCGAAATGCCCGCCTGAGAAATCCTCTGCTGTTGCTAAGCTTCAGTCTCTCATCTCTTTGACGTCTAAGCAACTTCAGATCAGATCTTCCAATTGTCATGAAATTTCAGAAGATTGA
mRNA sequence
ATGCCTCAACGAGATTGGCATAAGAATCCGAAAGGAAAAGAGAATATGAGTTCTGGAGGAGGAATCGCCGCTTGGAATGTGTTTGACAATGTGAAGACCACAACGAAGACGCCTGAAGCTCTAATCGCGGAGATCAATACTGCAATTGCAAATCTCGAATATGCTCGATCAACCGCCTTCTTAGAATCTCCAATTTCTCCCACTCCACAAGATAGGAGCTCTGGTGTGAGCTCAAGTACTCAGTATGATGCACGAATTGCAGATGAAGCGTACAAGGCAGGGTGTGCGGCATTGGCTGTTGGTAAACTCGATGAGGCTCTTCATTCGTTGAATGTCTCTCTTTCGAAATGCCCGCCTGAGAAATCCTCTGCTGTTGCTAAGCTTCAGTCTCTCATCTCTTTGACGTCTAAGCAACTTCAGATCAGATCTTCCAATTGTCATGAAATTTCAGAAGATTGA
Coding sequence (CDS)
ATGCCTCAACGAGATTGGCATAAGAATCCGAAAGGAAAAGAGAATATGAGTTCTGGAGGAGGAATCGCCGCTTGGAATGTGTTTGACAATGTGAAGACCACAACGAAGACGCCTGAAGCTCTAATCGCGGAGATCAATACTGCAATTGCAAATCTCGAATATGCTCGATCAACCGCCTTCTTAGAATCTCCAATTTCTCCCACTCCACAAGATAGGAGCTCTGGTGTGAGCTCAAGTACTCAGTATGATGCACGAATTGCAGATGAAGCGTACAAGGCAGGGTGTGCGGCATTGGCTGTTGGTAAACTCGATGAGGCTCTTCATTCGTTGAATGTCTCTCTTTCGAAATGCCCGCCTGAGAAATCCTCTGCTGTTGCTAAGCTTCAGTCTCTCATCTCTTTGACGTCTAAGCAACTTCAGATCAGATCTTCCAATTGTCATGAAATTTCAGAAGATTGA
Protein sequence
MPQRDWHKNPKGKENMSSGGGIAAWNVFDNVKTTTKTPEALIAEINTAIANLEYARSTAFLESPISPTPQDRSSGVSSSTQYDARIADEAYKAGCAALAVGKLDEALHSLNVSLSKCPPEKSSAVAKLQSLISLTSKQLQIRSSNCHEISED
Homology
BLAST of CmoCh01G019130 vs. ExPASy TrEMBL
Match:
A0A6J1FLM9 (uncharacterized protein LOC111446352 OS=Cucurbita moschata OX=3662 GN=LOC111446352 PE=4 SV=1)
HSP 1 Score: 294.7 bits (753), Expect = 2.3e-76
Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 0
Query: 1 MPQRDWHKNPKGKENMSSGGGIAAWNVFDNVKTTTKTPEALIAEINTAIANLEYARSTAF 60
MPQRDWHKNPKGKENMSSGGGIAAWNVFDNVKTTTKTPEALIAEINTAIANLEYARSTAF
Sbjct: 1 MPQRDWHKNPKGKENMSSGGGIAAWNVFDNVKTTTKTPEALIAEINTAIANLEYARSTAF 60
Query: 61 LESPISPTPQDRSSGVSSSTQYDARIADEAYKAGCAALAVGKLDEALHSLNVSLSKCPPE 120
LESPISPTPQDRSSGVSSSTQYDARIADEAYKAGCAALAVGKLDEALHSLNVSLSKCPPE
Sbjct: 61 LESPISPTPQDRSSGVSSSTQYDARIADEAYKAGCAALAVGKLDEALHSLNVSLSKCPPE 120
Query: 121 KSSAVAKLQSLISLTSKQLQIRSSNCHEISED 153
KSSAVAKLQSLISLTSKQLQIRSSNCHEISED
Sbjct: 121 KSSAVAKLQSLISLTSKQLQIRSSNCHEISED 152
BLAST of CmoCh01G019130 vs. ExPASy TrEMBL
Match:
A0A5A7VF87 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G003530 PE=4 SV=1)
HSP 1 Score: 216.9 bits (551), Expect = 6.0e-53
Identity = 113/152 (74.34%), Postives = 131/152 (86.18%), Query Frame = 0
Query: 1 MPQRDWHKNPKGKENMSSGGGIAAWNVFDNVKTTTKTPEALIAEINTAIANLEYARSTAF 60
M QR+WHK+ +G+E+++S GGI WNVFDNVKTTTKTPEAL+AEIN AI+NLEY R+ A+
Sbjct: 1 MHQRNWHKS-QGRESVNSEGGITVWNVFDNVKTTTKTPEALMAEINAAISNLEYDRTAAY 60
Query: 61 LESPISPTPQDRSSGVSSSTQYDARIADEAYKAGCAALAVGKLDEALHSLNVSLSKCPPE 120
LESPIS P+D +S +QYD RIAD AYKAGC AL +GKLDEALHSLNVSLSKCPPE
Sbjct: 61 LESPIS--PEDEEPSANSRSQYDVRIADGAYKAGCKALTIGKLDEALHSLNVSLSKCPPE 120
Query: 121 KSSAVAKLQSLISLTSKQLQIRSSNCHEISED 153
KSSAVAK+QSLISLTS+Q+QIRSSNC EISED
Sbjct: 121 KSSAVAKIQSLISLTSQQIQIRSSNCQEISED 149
BLAST of CmoCh01G019130 vs. ExPASy TrEMBL
Match:
A0A0A0L090 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G639170 PE=4 SV=1)
HSP 1 Score: 216.9 bits (551), Expect = 6.0e-53
Identity = 115/153 (75.16%), Postives = 133/153 (86.93%), Query Frame = 0
Query: 1 MPQRDWHKNPKGKENMSSGGGIAAWNVFDNVKTTTKTPEALIAEINTAIANLEYARSTAF 60
MPQR+ HK+ + +E+++S GGIAAWNVFD+VKTTTKTPEAL+ EI AI+NLEYAR+TA+
Sbjct: 1 MPQRNRHKSQE-RESVNSEGGIAAWNVFDSVKTTTKTPEALMGEIGAAISNLEYARTTAY 60
Query: 61 LESPISP-TPQDRSSGVSSSTQYDARIADEAYKAGCAALAVGKLDEALHSLNVSLSKCPP 120
LESPISP P+D +S +QYD R+AD AYKAGC AL VGKLDEALHSLNVSLSKCPP
Sbjct: 61 LESPISPDEPEDEEPSANSRSQYDVRMADGAYKAGCKALTVGKLDEALHSLNVSLSKCPP 120
Query: 121 EKSSAVAKLQSLISLTSKQLQIRSSNCHEISED 153
EKSSAVAK+QSLISLTS+QLQIRSSNC EISED
Sbjct: 121 EKSSAVAKIQSLISLTSQQLQIRSSNCQEISED 152
BLAST of CmoCh01G019130 vs. ExPASy TrEMBL
Match:
A0A1S3BU07 (uncharacterized protein LOC103493531 OS=Cucumis melo OX=3656 GN=LOC103493531 PE=4 SV=1)
HSP 1 Score: 216.9 bits (551), Expect = 6.0e-53
Identity = 113/152 (74.34%), Postives = 131/152 (86.18%), Query Frame = 0
Query: 1 MPQRDWHKNPKGKENMSSGGGIAAWNVFDNVKTTTKTPEALIAEINTAIANLEYARSTAF 60
M QR+WHK+ +G+E+++S GGI WNVFDNVKTTTKTPEAL+AEIN AI+NLEY R+ A+
Sbjct: 1 MHQRNWHKS-QGRESVNSEGGITVWNVFDNVKTTTKTPEALMAEINAAISNLEYDRTAAY 60
Query: 61 LESPISPTPQDRSSGVSSSTQYDARIADEAYKAGCAALAVGKLDEALHSLNVSLSKCPPE 120
LESPIS P+D +S +QYD RIAD AYKAGC AL +GKLDEALHSLNVSLSKCPPE
Sbjct: 61 LESPIS--PEDEEPSANSRSQYDVRIADGAYKAGCKALTIGKLDEALHSLNVSLSKCPPE 120
Query: 121 KSSAVAKLQSLISLTSKQLQIRSSNCHEISED 153
KSSAVAK+QSLISLTS+Q+QIRSSNC EISED
Sbjct: 121 KSSAVAKIQSLISLTSQQIQIRSSNCQEISED 149
BLAST of CmoCh01G019130 vs. ExPASy TrEMBL
Match:
A0A6J1BP49 (uncharacterized protein LOC111026168 OS=Momordica charantia OX=3673 GN=LOC111026168 PE=4 SV=1)
HSP 1 Score: 208.4 bits (529), Expect = 2.1e-50
Identity = 113/152 (74.34%), Postives = 124/152 (81.58%), Query Frame = 0
Query: 1 MPQRDWHKNPKGKENMSSGGGIAAWNVFDNVKTTTKTPEALIAEINTAIANLEYARSTAF 60
MP RD KNPK +EN+ S GGI AWN FDNV TTKTPEAL+AEIN AI+ +EYAR+TA
Sbjct: 18 MPHRDLPKNPKERENVISVGGIMAWNAFDNVTATTKTPEALMAEINAAISKIEYARTTAC 77
Query: 61 LESPISPTPQDRSSGVSSSTQYDARIADEAYKAGCAALAVGKLDEALHSLNVSLSKCPPE 120
LES P QD SG S QYDAR+ADEAYKAGCAALAVGKLD+ALHSLNVSLSKCPPE
Sbjct: 78 LESATPPASQDGGSGASLMPQYDARMADEAYKAGCAALAVGKLDDALHSLNVSLSKCPPE 137
Query: 121 KSSAVAKLQSLISLTSKQLQIRSSNCHEISED 153
K+SAVAKL SLI+LTS+QL RSSNC EISED
Sbjct: 138 KTSAVAKLLSLITLTSQQLH-RSSNCSEISED 168
BLAST of CmoCh01G019130 vs. NCBI nr
Match:
XP_022940904.1 (uncharacterized protein LOC111446352 [Cucurbita moschata])
HSP 1 Score: 294.7 bits (753), Expect = 4.7e-76
Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 0
Query: 1 MPQRDWHKNPKGKENMSSGGGIAAWNVFDNVKTTTKTPEALIAEINTAIANLEYARSTAF 60
MPQRDWHKNPKGKENMSSGGGIAAWNVFDNVKTTTKTPEALIAEINTAIANLEYARSTAF
Sbjct: 1 MPQRDWHKNPKGKENMSSGGGIAAWNVFDNVKTTTKTPEALIAEINTAIANLEYARSTAF 60
Query: 61 LESPISPTPQDRSSGVSSSTQYDARIADEAYKAGCAALAVGKLDEALHSLNVSLSKCPPE 120
LESPISPTPQDRSSGVSSSTQYDARIADEAYKAGCAALAVGKLDEALHSLNVSLSKCPPE
Sbjct: 61 LESPISPTPQDRSSGVSSSTQYDARIADEAYKAGCAALAVGKLDEALHSLNVSLSKCPPE 120
Query: 121 KSSAVAKLQSLISLTSKQLQIRSSNCHEISED 153
KSSAVAKLQSLISLTSKQLQIRSSNCHEISED
Sbjct: 121 KSSAVAKLQSLISLTSKQLQIRSSNCHEISED 152
BLAST of CmoCh01G019130 vs. NCBI nr
Match:
KAG6608487.1 (hypothetical protein SDJN03_01829, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 291.6 bits (745), Expect = 4.0e-75
Identity = 150/152 (98.68%), Postives = 151/152 (99.34%), Query Frame = 0
Query: 1 MPQRDWHKNPKGKENMSSGGGIAAWNVFDNVKTTTKTPEALIAEINTAIANLEYARSTAF 60
MPQRDWHKNPKGKENMSSGGGIAAWNVFDNVKTTTKTPEALIAEINTAIANLEYARSTAF
Sbjct: 1 MPQRDWHKNPKGKENMSSGGGIAAWNVFDNVKTTTKTPEALIAEINTAIANLEYARSTAF 60
Query: 61 LESPISPTPQDRSSGVSSSTQYDARIADEAYKAGCAALAVGKLDEALHSLNVSLSKCPPE 120
LESPISPTPQDRSSG SSSTQYDARIADEAYKAGCAALAVGKLDEALHSLNVSLSKCPPE
Sbjct: 61 LESPISPTPQDRSSGASSSTQYDARIADEAYKAGCAALAVGKLDEALHSLNVSLSKCPPE 120
Query: 121 KSSAVAKLQSLISLTSKQLQIRSSNCHEISED 153
KSSAVAKLQSLISLTS+QLQIRSSNCHEISED
Sbjct: 121 KSSAVAKLQSLISLTSQQLQIRSSNCHEISED 152
BLAST of CmoCh01G019130 vs. NCBI nr
Match:
KAG7037814.1 (hypothetical protein SDJN02_01445, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 262.7 bits (670), Expect = 2.0e-66
Identity = 135/137 (98.54%), Postives = 136/137 (99.27%), Query Frame = 0
Query: 1 MPQRDWHKNPKGKENMSSGGGIAAWNVFDNVKTTTKTPEALIAEINTAIANLEYARSTAF 60
MPQRDWHKNPKGKENMSSGGGIAAWNVFDNVKTTTKTPEALIAEINTAIANLEYARSTAF
Sbjct: 1 MPQRDWHKNPKGKENMSSGGGIAAWNVFDNVKTTTKTPEALIAEINTAIANLEYARSTAF 60
Query: 61 LESPISPTPQDRSSGVSSSTQYDARIADEAYKAGCAALAVGKLDEALHSLNVSLSKCPPE 120
LESPISPTPQDRSSG SSSTQYDARIADEAYKAGCAALAVGKLDEALHSLNVSLSKCPPE
Sbjct: 61 LESPISPTPQDRSSGASSSTQYDARIADEAYKAGCAALAVGKLDEALHSLNVSLSKCPPE 120
Query: 121 KSSAVAKLQSLISLTSK 138
KSSAVAKLQSLISLTS+
Sbjct: 121 KSSAVAKLQSLISLTSQ 137
BLAST of CmoCh01G019130 vs. NCBI nr
Match:
XP_038899466.1 (uncharacterized protein LOC120086752 [Benincasa hispida] >XP_038899467.1 uncharacterized protein LOC120086752 [Benincasa hispida])
HSP 1 Score: 222.6 bits (566), Expect = 2.3e-54
Identity = 121/153 (79.08%), Postives = 129/153 (84.31%), Query Frame = 0
Query: 1 MPQRDWHKNPKGKENMSSGGGIAAWNVFDNVKTTTKTPEALIAEINTAIANLEYARSTAF 60
MPQRDWHKN K ENM+SG GIAAWNVFDNVKTTTKTPEAL+AEIN AI+N EYAR+TA
Sbjct: 1 MPQRDWHKNLKEGENMNSGEGIAAWNVFDNVKTTTKTPEALMAEINAAISNFEYARTTAC 60
Query: 61 LESPISP-TPQDRSSGVSSSTQYDARIADEAYKAGCAALAVGKLDEALHSLNVSLSKCPP 120
L+SPISP +D S S TQY R+AD +YKAGCAA VGKLDEALHSLNVSLSKCPP
Sbjct: 61 LQSPISPDDSEDGESSASLRTQYVVRMADGSYKAGCAAPTVGKLDEALHSLNVSLSKCPP 120
Query: 121 EKSSAVAKLQSLISLTSKQLQIRSSNCHEISED 153
EKSSAVAKLQSLISLTS QLQIRSSN EISED
Sbjct: 121 EKSSAVAKLQSLISLTSHQLQIRSSNSQEISED 153
BLAST of CmoCh01G019130 vs. NCBI nr
Match:
XP_008452533.1 (PREDICTED: uncharacterized protein LOC103493531 [Cucumis melo] >KAA0064371.1 uncharacterized protein E6C27_scaffold255G00720 [Cucumis melo var. makuwa] >TYK20216.1 uncharacterized protein E5676_scaffold134G003530 [Cucumis melo var. makuwa])
HSP 1 Score: 216.9 bits (551), Expect = 1.2e-52
Identity = 113/152 (74.34%), Postives = 131/152 (86.18%), Query Frame = 0
Query: 1 MPQRDWHKNPKGKENMSSGGGIAAWNVFDNVKTTTKTPEALIAEINTAIANLEYARSTAF 60
M QR+WHK+ +G+E+++S GGI WNVFDNVKTTTKTPEAL+AEIN AI+NLEY R+ A+
Sbjct: 1 MHQRNWHKS-QGRESVNSEGGITVWNVFDNVKTTTKTPEALMAEINAAISNLEYDRTAAY 60
Query: 61 LESPISPTPQDRSSGVSSSTQYDARIADEAYKAGCAALAVGKLDEALHSLNVSLSKCPPE 120
LESPIS P+D +S +QYD RIAD AYKAGC AL +GKLDEALHSLNVSLSKCPPE
Sbjct: 61 LESPIS--PEDEEPSANSRSQYDVRIADGAYKAGCKALTIGKLDEALHSLNVSLSKCPPE 120
Query: 121 KSSAVAKLQSLISLTSKQLQIRSSNCHEISED 153
KSSAVAK+QSLISLTS+Q+QIRSSNC EISED
Sbjct: 121 KSSAVAKIQSLISLTSQQIQIRSSNCQEISED 149
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A6J1FLM9 | 2.3e-76 | 100.00 | uncharacterized protein LOC111446352 OS=Cucurbita moschata OX=3662 GN=LOC1114463... | [more] |
| A0A5A7VF87 | 6.0e-53 | 74.34 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
| A0A0A0L090 | 6.0e-53 | 75.16 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G639170 PE=4 SV=1 | [more] |
| A0A1S3BU07 | 6.0e-53 | 74.34 | uncharacterized protein LOC103493531 OS=Cucumis melo OX=3656 GN=LOC103493531 PE=... | [more] |
| A0A6J1BP49 | 2.1e-50 | 74.34 | uncharacterized protein LOC111026168 OS=Momordica charantia OX=3673 GN=LOC111026... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| XP_022940904.1 | 4.7e-76 | 100.00 | uncharacterized protein LOC111446352 [Cucurbita moschata] | [more] |
| KAG6608487.1 | 4.0e-75 | 98.68 | hypothetical protein SDJN03_01829, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
| KAG7037814.1 | 2.0e-66 | 98.54 | hypothetical protein SDJN02_01445, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
| XP_038899466.1 | 2.3e-54 | 79.08 | uncharacterized protein LOC120086752 [Benincasa hispida] >XP_038899467.1 unchara... | [more] |
| XP_008452533.1 | 1.2e-52 | 74.34 | PREDICTED: uncharacterized protein LOC103493531 [Cucumis melo] >KAA0064371.1 unc... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
