CmoCh01G018330 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATCGAACAGCGCCATATTAAGAGGGTGGGAAGTGTGAACCAGTCGCTTTCTTCACCGTACGAATCAGGTGCAATGTCATGGTTGGCTCTCTCCATTGCTAACACCCTTCGCCTTGACGACGAAGAAGATGAGCAGCACAACGACGTCGTATCTTCTTCTTCTTCTTCTTCCACCATTCCCCGCAACCAGATGGAATCCCAATCCCAACCCCAACTCGACGACGAAGCATTATCTCGCCGCGTCAAAGAGGACTTGACTGAATTCAAACAAACCCTAACCCGCCAATTTTGGGGCGTGGCCACTTTCCTTGCTCCTCCTCCGCCTCCGCCGGAACCGGGGCCGACTCATCATCTCAACCTGGCGGAGGATCTGGTTGCCCCTCCCGATTGGAAGTCGTTCGAGGCGTCTAATCAGTCTGATCCATCGATCTCCGGGGACGAAGAGGACCTGACTGATCCGATTGAGGTTTTGAATATGCGTTCCAATCATGACGCCTATGCGAAATCGGGGATTTTACAGGAGGAATGCTATGAGGTGGATTGGGAAGGCGCTGTTGGGATCACTGATGAAGTGCTGACGTTTGCTACGAACATTGCAATGCACCCTGAAACTTGGATTGATTTCCCAATTGACGAGGAGGAGGACAACGGTGGTATGTGTGTTTTGCTAATTTTGCTATCCAATTCCTTAGATGCTTGTTAATTGATTTCTCTTCGACGAGGAAACCTGCTATCTGGTCTTAATCTTAATCTTATTCATTTTTTTATCGGATATAGGATGAAGGTTACTGAATGTTCTGAAGGCCACTGCTAATGATCTTTAGCGTCATTGGTTCTTTTAATGAATTGTTCGATTGATGCTGGAATCGTTTATGAGATGCTTTTAGAAACTCGATTCCATAAATGGAGACTTCTATGAAATAAGGCATTCGACTATCCGAGTGTTCCATCCTTTTGGATCTTCTTCACCGGGCATGTTAGAAATTTATCTTGGGATGTGTTGAGTGCTACAATTAGATGTCAGCAGTTAGCTCAGAATTTTTGTTGCTGTATCTCATTCAGCAACTATTTTCCAAAATGAACTTAAGTATCTTTAGTTGGCACACCTGTGGTCCATAGAGTAAGAGATGGGTATTAAATTTTTTTGATAACTCAGTAAACCCTTTTGGATTTCAGGATAGTACTCTTGGATCATGCCTCAGTTTTTATATCTACATGGGTTCTGTCACCTCACTTGTTGACCTCCACTTGTGTATCTTTCCTCATAACTTCCTGCCTTGCCATTCCAGTTCCCAATTTTTCTTCCTTTTCTGGTTCTCGATGTCTATTACCTTTTCCATTAACGATTACCTTTGGCTATGGGCAGAAGTTGAAATATTGTGGTTCCCTCAGTGCTATACAACACATACATTCAGTGATTCCATTCGCGTACTTTACATCTTTTGTACGCGAATTGAACTCATTCATTCAAGGTGCCATTGCACTTATGTTGTGATAGGAAGGATAAGCCCCCAATTCAGTTCACCCACACTAGGTGAAAGCATCATGAGTATTAAGTAATAGTTTTGTTATGCAACATGTGAATTTGTGAAGTGTTAGATAATCTCCCTCCTATAGCGTGTAGTGTGCATGGATCCTTTATGTGATGTGGGACCACAATGTCTAGAAATGGTCATTGTATACTTTTCCGGGTCAGAAGGCGTCGGGGAGGGAGGATATTGGGCGGGATCTATGAGCAACGAATCCCCATACATCTCAATGTGAAGGTCTTTTGGCCTATCACAATAAAGAGTGAAGTCAAGATAGCTTTAAGTGTGTGTGGGGATTTGTCATGTGATTCAGATACACTCCTAATTTGAACGGATGAGGTACCAACCCAAGCTGAAAACTAAGTCTACGCAAGCAAAGCTTTATAGATAGACATTTTTATTGTGAATACTTAAGGTTTTTTTTTAAAAAAAATTTTAAAATTATTTTTTATTTTTTAAAATACCACGGGAAGCATACATTTCTGAAGCTACAAAGCTAGTCATTATATCATTGATGACAAGAGATTTTAGGGCTCGTTGGAGGTGGACATTAAGCATAGTGTATTGAAACTAGAGACGGATCAAGGTAGCTTGCCTGTGAAAGGAGAGACTTAGGCCTTTCCAAAACCTGGGAACTTGTTTCCTTTCAATATAATTAGCATATCACATATTGCATTAGAGGCTCTATCGATTATGTTCATTATTTAGAGTGTGAATATGATGTTTCAGTTTTATACAATTAAGTGTGACCCAAGTTATTTGATTTTCAGTATTATGACTATTTCTGAATTTCATCATAACCCCATCTCCTATACCTGGATATGTAAGATGAACGGGAAAGGAATTTTTATAAGTTGATCCACTTAAATTACTAAATATGTTGACTTTTGAATGGTGAGTTTGGACTTTGTCGTTGTTTAACTATCTGCTTTTATGATGTTTTTCACATTGTTGAGCCCTGTGTATTTACGTCTTTAGACCCTTCTTTTTCTTGTTTTAGATTTTGAAATGTCTGATGCCCAAAAAGAGCATGCTTTCACTATTGAACATCTTGCTCCTAGATTGGCTGCTCTCAGATTTGAGCTCTGTCCTTGCCATATGAGTGAGAGTTACTTTTGGAAAGTTTACTTTGTGCTCCTGCATTCAAGACTCAATAAACAGGATGCTGAGGCTTTATCTACTCCACAGGTTGACTACTCTTTCTTTTCTTTGTTTTTTAAAATTGCAATGCAACCTTCTTAGGTAGGTTACGTAATTTCCACATTGTTATGGTCTGGCATGATGATGCTTATTTGTAATTTAGGGTTCCCATGTATAGTTAAATTTTGCACAAAATGACCCAAATGCTATGATTGCAGAAAATTTTATTATATTCATATGGAGTTCAAACATGTATTATTTTACTGCTTTAAATGAGTATTAATCTGGTTCCTTTGATTGAAACGTTATGGTTCTAATATAATTTGGTTTCACCAAACTTGTAGGTAGCAGAAGCCAGATCAATGTGGATGCAGGAATTACAAAAGAAGACCAAGCCAGAGACTTTCTGGTGTGGAAGAGACACTTTTGAATTAAAAGACAGCTCTGATTTGTTGCAGGAAGATGATAACTCCATGGGCCTTGAAACTCATTCTGTATCTACGCTGCCTTGGACATTTACATCTGAGCCAAGCATGTCGTCTATGTCGAGCAATTGTGAGACAGAAAAATACCAAATAGAGACTTCTGAAACACAATTCATTGATAAGTCCGTCATCGTTGAAAAACCTATAATTAAAGATGAGGATAAAAACTCGACAATTGAGTCTTCTTCAAAATTCCTTGTTCAGAACTACGACGACGAGTCAGATAATGATTGGCTAGAGGAAGACTCTGGGACCATCCTCCCTCTGGGGTACGATGAAGATATTTCTTTCAGTGATCTCGAGGATGATGATATGGTTCTGCCTGCTAAGTTCAAGATTGTTTCAAAAGAATAAGGAAGTTAAACAAAAGAATTCAAGGCGATGCTTCCAATTGTGTATGCTTTGCCGATGAGGCTAAATGAATTACAAAGTCAGTCTGACAAGATTGATGGGGCTTCAGTTACCGATCTTTATGAAACCATCTGAAATTGCTTTTAGTTGATGGGGTTGGTGGGTGCATTTGTAAATGAATGAGAGAATGATTATTCCAGTTTGGAAGAGTGACAATGTCTCTGTTTGGTTTCTTGTTTGGGAACTGTGTAAAGAATGTATCAGTAAATAGACAAAACGGGAAAAGATATAGATTCTTTTTGTTCCATGCCCAACGATGATTGTCCTCATCCCTTTGTTGGTCTGTCAGGAGTGGAGATTCATTCATCGGAGGCTGTCTGACAGAAGAAAGCGCTAAAAACAGCCAAAGGAGCCACCGAATTGAGGCAGCTGAGAAGAGGATTCTGTTGGATGGAAGTTACCCATCATCTCATTGGTATCTACAGAACCACCATAATGGACCATTCTTTCTATTGGATTGCTGTACTTTTTTACCTTTCTACTCCTTAAAGATAAGATATTTAGCATATAGCTTTAGTTATCATACTCACAGATAGGCCTTTGAAATGCAAGTTGGCCCATTATTTTGTTCTTTGAGTATCAGACCAATGAGCTTTTATTTGTTTGTTTGTTCAAAATTGATACCAGAAATTGAACCGAAGCGTACTGACCACAATCACTCTGGATGAGATTTGTTTTCGAGTTAGAAAGCCGACAAACAGGATAAAGAAATGAGACGGAAGACAGGGAATATTCAACAGAACCG ATCGAACAGCGCCATATTAAGAGGGTGGGAAGTGTGAACCAGTCGCTTTCTTCACCGTACGAATCAGGTGCAATGTCATGGTTGGCTCTCTCCATTGCTAACACCCTTCGCCTTGACGACGAAGAAGATGAGCAGCACAACGACGTCGTATCTTCTTCTTCTTCTTCTTCCACCATTCCCCGCAACCAGATGGAATCCCAATCCCAACCCCAACTCGACGACGAAGCATTATCTCGCCGCGTCAAAGAGGACTTGACTGAATTCAAACAAACCCTAACCCGCCAATTTTGGGGCGTGGCCACTTTCCTTGCTCCTCCTCCGCCTCCGCCGGAACCGGGGCCGACTCATCATCTCAACCTGGCGGAGGATCTGGTTGCCCCTCCCGATTGGAAGTCGTTCGAGGCGTCTAATCAGTCTGATCCATCGATCTCCGGGGACGAAGAGGACCTGACTGATCCGATTGAGGTTTTGAATATGCGTTCCAATCATGACGCCTATGCGAAATCGGGGATTTTACAGGAGGAATGCTATGAGGTGGATTGGGAAGGCGCTGTTGGGATCACTGATGAAGTGCTGACGTTTGCTACGAACATTGCAATGCACCCTGAAACTTGGATTGATTTCCCAATTGACGAGGAGGAGGACAACGGTGATTTTGAAATGTCTGATGCCCAAAAAGAGCATGCTTTCACTATTGAACATCTTGCTCCTAGATTGGCTGCTCTCAGATTTGAGCTCTGTCCTTGCCATATGAGTGAGAGTTACTTTTGGAAAGTTTACTTTGTGCTCCTGCATTCAAGACTCAATAAACAGGATGCTGAGGCTTTATCTACTCCACAGGTAGCAGAAGCCAGATCAATGTGGATGCAGGAATTACAAAAGAAGACCAAGCCAGAGACTTTCTGGTGTGGAAGAGACACTTTTGAATTAAAAGACAGCTCTGATTTGTTGCAGGAAGATGATAACTCCATGGGCCTTGAAACTCATTCTGTATCTACGCTGCCTTGGACATTTACATCTGAGCCAAGCATGTCGTCTATGTCGAGCAATTGTGAGACAGAAAAATACCAAATAGAGACTTCTGAAACACAATTCATTGATAAGTCCGTCATCGTTGAAAAACCTATAATTAAAGATGAGGATAAAAACTCGACAATTGAGTCTTCTTCAAAATTCCTTGTTCAGAACTACGACGACGAGTCAGATAATGATTGGCTAGAGGAAGACTCTGGGACCATCCTCCCTCTGGGGTACGATGAAGATATTTCTTTCAGTGATCTCGAGGATGATGATATGGTTCTGCCTGCTAAGTTCAAGATTGTTTCAAAAGAATAAGGAAGTTAAACAAAAGAATTCAAGGCGATGCTTCCAATTGTGTATGCTTTGCCGATGAGGCTAAATGAATTACAAAGTCAGTCTGACAAGATTGATGGGGCTTCAGTTACCGATCTTTATGAAACCATCTGAAATTGCTTTTAGTTGATGGGGTTGGTGGGTGCATTTGTAAATGAATGAGAGAATGATTATTCCAGTTTGGAAGAGTGACAATGTCTCTGTTTGGTTTCTTGTTTGGGAACTGTGTAAAGAATGTATCAGTAAATAGACAAAACGGGAAAAGATATAGATTCTTTTTGTTCCATGCCCAACGATGATTGTCCTCATCCCTTTGTTGGTCTGTCAGGAGTGGAGATTCATTCATCGGAGGCTGTCTGACAGAAGAAAGCGCTAAAAACAGCCAAAGGAGCCACCGAATTGAGGCAGCTGAGAAGAGGATTCTGTTGGATGGAAGTTACCCATCATCTCATTGGTATCTACAGAACCACCATAATGGACCATTCTTTCTATTGGATTGCTGTACTTTTTTACCTTTCTACTCCTTAAAGATAAGATATTTAGCATATAGCTTTAGTTATCATACTCACAGATAGGCCTTTGAAATGCAAGTTGGCCCATTATTTTGTTCTTTGAGTATCAGACCAATGAGCTTTTATTTGTTTGTTTGTTCAAAATTGATACCAGAAATTGAACCGAAGCGTACTGACCACAATCACTCTGGATGAGATTTGTTTTCGAGTTAGAAAGCCGACAAACAGGATAAAGAAATGAGACGGAAGACAGGGAATATTCAACAGAACCG ATGTCATGGTTGGCTCTCTCCATTGCTAACACCCTTCGCCTTGACGACGAAGAAGATGAGCAGCACAACGACGTCGTATCTTCTTCTTCTTCTTCTTCCACCATTCCCCGCAACCAGATGGAATCCCAATCCCAACCCCAACTCGACGACGAAGCATTATCTCGCCGCGTCAAAGAGGACTTGACTGAATTCAAACAAACCCTAACCCGCCAATTTTGGGGCGTGGCCACTTTCCTTGCTCCTCCTCCGCCTCCGCCGGAACCGGGGCCGACTCATCATCTCAACCTGGCGGAGGATCTGGTTGCCCCTCCCGATTGGAAGTCGTTCGAGGCGTCTAATCAGTCTGATCCATCGATCTCCGGGGACGAAGAGGACCTGACTGATCCGATTGAGGTTTTGAATATGCGTTCCAATCATGACGCCTATGCGAAATCGGGGATTTTACAGGAGGAATGCTATGAGGTGGATTGGGAAGGCGCTGTTGGGATCACTGATGAAGTGCTGACGTTTGCTACGAACATTGCAATGCACCCTGAAACTTGGATTGATTTCCCAATTGACGAGGAGGAGGACAACGGTGATTTTGAAATGTCTGATGCCCAAAAAGAGCATGCTTTCACTATTGAACATCTTGCTCCTAGATTGGCTGCTCTCAGATTTGAGCTCTGTCCTTGCCATATGAGTGAGAGTTACTTTTGGAAAGTTTACTTTGTGCTCCTGCATTCAAGACTCAATAAACAGGATGCTGAGGCTTTATCTACTCCACAGGTAGCAGAAGCCAGATCAATGTGGATGCAGGAATTACAAAAGAAGACCAAGCCAGAGACTTTCTGGTGTGGAAGAGACACTTTTGAATTAAAAGACAGCTCTGATTTGTTGCAGGAAGATGATAACTCCATGGGCCTTGAAACTCATTCTGTATCTACGCTGCCTTGGACATTTACATCTGAGCCAAGCATGTCGTCTATGTCGAGCAATTGTGAGACAGAAAAATACCAAATAGAGACTTCTGAAACACAATTCATTGATAAGTCCGTCATCGTTGAAAAACCTATAATTAAAGATGAGGATAAAAACTCGACAATTGAGTCTTCTTCAAAATTCCTTGTTCAGAACTACGACGACGAGTCAGATAATGATTGGCTAGAGGAAGACTCTGGGACCATCCTCCCTCTGGGGTACGATGAAGATATTTCTTTCAGTGATCTCGAGGATGATGATATGGTTCTGCCTGCTAAGTTCAAGATTGTTTCAAAAGAATAA MSWLALSIANTLRLDDEEDEQHNDVVSSSSSSSTIPRNQMESQSQPQLDDEALSRRVKEDLTEFKQTLTRQFWGVATFLAPPPPPPEPGPTHHLNLAEDLVAPPDWKSFEASNQSDPSISGDEEDLTDPIEVLNMRSNHDAYAKSGILQEECYEVDWEGAVGITDEVLTFATNIAMHPETWIDFPIDEEEDNGDFEMSDAQKEHAFTIEHLAPRLAALRFELCPCHMSESYFWKVYFVLLHSRLNKQDAEALSTPQVAEARSMWMQELQKKTKPETFWCGRDTFELKDSSDLLQEDDNSMGLETHSVSTLPWTFTSEPSMSSMSSNCETEKYQIETSETQFIDKSVIVEKPIIKDEDKNSTIESSSKFLVQNYDDESDNDWLEEDSGTILPLGYDEDISFSDLEDDDMVLPAKFKIVSKE Homology
BLAST of CmoCh01G018330 vs. ExPASy TrEMBL
Match: A0A6J1FPT7 (uncharacterized protein LOC111446162 OS=Cucurbita moschata OX=3662 GN=LOC111446162 PE=4 SV=1) HSP 1 Score: 837.8 bits (2163), Expect = 2.0e-239 Identity = 420/420 (100.00%), Postives = 420/420 (100.00%), Query Frame = 0
BLAST of CmoCh01G018330 vs. ExPASy TrEMBL
Match: A0A6J1J1L0 (uncharacterized protein LOC111480445 OS=Cucurbita maxima OX=3661 GN=LOC111480445 PE=4 SV=1) HSP 1 Score: 802.0 bits (2070), Expect = 1.2e-228 Identity = 408/426 (95.77%), Postives = 412/426 (96.71%), Query Frame = 0
BLAST of CmoCh01G018330 vs. ExPASy TrEMBL
Match: A0A0A0L3U8 (BSD domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G644640 PE=4 SV=1) HSP 1 Score: 614.4 bits (1583), Expect = 3.6e-172 Identity = 333/438 (76.03%), Postives = 363/438 (82.88%), Query Frame = 0
BLAST of CmoCh01G018330 vs. ExPASy TrEMBL
Match: A0A5A7V7Z5 (Putative BSD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold255G001760 PE=4 SV=1) HSP 1 Score: 610.1 bits (1572), Expect = 6.7e-171 Identity = 334/438 (76.26%), Postives = 360/438 (82.19%), Query Frame = 0
BLAST of CmoCh01G018330 vs. ExPASy TrEMBL
Match: A0A1S3BUE8 (uncharacterized protein LOC103493619 OS=Cucumis melo OX=3656 GN=LOC103493619 PE=4 SV=1) HSP 1 Score: 610.1 bits (1572), Expect = 6.7e-171 Identity = 334/438 (76.26%), Postives = 360/438 (82.19%), Query Frame = 0
BLAST of CmoCh01G018330 vs. NCBI nr
Match: XP_022940623.1 (uncharacterized protein LOC111446162 [Cucurbita moschata]) HSP 1 Score: 837.8 bits (2163), Expect = 4.1e-239 Identity = 420/420 (100.00%), Postives = 420/420 (100.00%), Query Frame = 0
BLAST of CmoCh01G018330 vs. NCBI nr
Match: XP_023524215.1 (uncharacterized protein LOC111788188 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 821.6 bits (2121), Expect = 3.0e-234 Identity = 416/428 (97.20%), Postives = 418/428 (97.66%), Query Frame = 0
BLAST of CmoCh01G018330 vs. NCBI nr
Match: XP_022981253.1 (uncharacterized protein LOC111480445 [Cucurbita maxima]) HSP 1 Score: 802.0 bits (2070), Expect = 2.5e-228 Identity = 408/426 (95.77%), Postives = 412/426 (96.71%), Query Frame = 0
BLAST of CmoCh01G018330 vs. NCBI nr
Match: KAG7037753.1 (hypothetical protein SDJN02_01384 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 785.4 bits (2027), Expect = 2.4e-223 Identity = 408/470 (86.81%), Postives = 410/470 (87.23%), Query Frame = 0
BLAST of CmoCh01G018330 vs. NCBI nr
Match: KAG6608414.1 (hypothetical protein SDJN03_01756, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 773.1 bits (1995), Expect = 1.2e-219 Identity = 388/393 (98.73%), Postives = 390/393 (99.24%), Query Frame = 0
BLAST of CmoCh01G018330 vs. TAIR 10
Match: AT1G10720.1 (BSD domain-containing protein ) HSP 1 Score: 241.1 bits (614), Expect = 1.6e-63 Identity = 166/422 (39.34%), Postives = 234/422 (55.45%), Query Frame = 0
BLAST of CmoCh01G018330 vs. TAIR 10
Match: AT3G49800.1 (BSD domain-containing protein ) HSP 1 Score: 239.6 bits (610), Expect = 4.6e-63 Identity = 168/446 (37.67%), Postives = 240/446 (53.81%), Query Frame = 0
BLAST of CmoCh01G018330 vs. TAIR 10
Match: AT5G65910.1 (BSD domain-containing protein ) HSP 1 Score: 223.8 bits (569), Expect = 2.6e-58 Identity = 161/429 (37.53%), Postives = 238/429 (55.48%), Query Frame = 0
BLAST of CmoCh01G018330 vs. TAIR 10
Match: AT2G10950.1 (BSD domain-containing protein ) HSP 1 Score: 95.5 bits (236), Expect = 1.1e-19 Identity = 77/244 (31.56%), Postives = 117/244 (47.95%), Query Frame = 0
BLAST of CmoCh01G018330 vs. TAIR 10
Match: AT1G26300.1 (BSD domain-containing protein ) HSP 1 Score: 52.0 bits (123), Expect = 1.4e-06 Identity = 41/167 (24.55%), Postives = 73/167 (43.71%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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