CmoCh01G017620 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh01G017620
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
LocationCmo_Chr01: 13084739 .. 13086522 (-)
RNA-Seq ExpressionCmoCh01G017620
SyntenyCmoCh01G017620
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGAAGGGAAGGCAAGACGACGTCGTAAAGGTGGAAGGATTGGGAGATGGAAGGAGAGTCGTTTGATTTGTGTGATGAACGGGGGAGAAATCACGGGCGTGGGATATTGATTCAATCTGTAATTGAGGGTATAAATTTCCGATTCATCTAGGACGGGGGGGAAGGGTGTGTTTTGTATTTGTGGTAAAACGAGGGGACGAACAGGAAGAAGAAGAAGAAGAAGAAGAAGCTCTCTGCTGTTCTTGTGGCGCTCCTTTGAAGCTTTTCCCTTTTGTTCTTAATCTCTCGTTATTGTTTTTTAATCGAGGACGAAGCTTAGTGTTCTCAATTCTAGTCCAGAATGCCGAGGATCTGTCATTTGTAGATAAGCTTGCGGGTGGAACAATTTCGCTCCGTGCTTCAATTTTTCTCCGTCCTCTGCAATTGATCCATCTGAAGGGTTGATTAAAGAGACTTGGATTTTCTTTTTTGTTTAATTTTTTTTTTCACGGATACATTCGGGAATTTTTAGTTCAAGAAATTCGGTGTGGATTTGATTTCTGAGCGAATTTTGCTCCCTAATTTGCTCTATCGATGCCGTCTCGTTTGTAATCGTCGGAGGGCGGTTGTGAAGATTACGGAGGCTTGAATTTTTTGTGAGAATTCTTTTACTCTGTTGTCAGTTATTTGTATTTTTGTGTTGTGGAATAACTCTGTTAATTGATTTTCTTTAATTTGTTCTTCCTTGTAGATGCATTTGAACGGATTTAAGCGTTTGTGTGAAGAAATCCGCAGTGTTGTATAGATTGGAGATTGGATGTTGCCGATGGAAATACGGTTGTTCTTCGACAGTCAGAGAAGACGACTCTGAGAGATGGAATTCCGTCGTTCTAATTTGGTTTCTGATTCGCATTCTCGCTTAGTCTGAAGAGCAAACGAAGCAAAACTCGTCTTGATTTTTGGCTGTGCTTGGAATTTCTTTATATCACAGGTAAAGAAAATTTTCCTGAATCGTAGATCGTAAATATTTTAGTAGGATTTTGAGATTTAGTCCGGAATTTTGATTTGTAGTTGTTGTTTTATACTGTGGCTTCTTTCGTTTTCATCCCCATTTGGTGGTTAAGGTCGGAGGTGTTCTTTTGAAATCCGACTTCTATTTGATTCTTCCTTATCTTCATCTAATGAGACCAATCGGCTTCCTATACTTCTCTTTTGTTTGCTTCAGTTGATGTTTTCAGGTAATGCATCAATTTTATTCATCTCGCTCTTCTTGAAGAAGTATTCTACTTGCTTCTATTATTCTCCTTTCCCTCCTTTCGAAGAACCCTAGAATTTCTTTTATTCTTGTGGCGATTGAGAATATCTTTCCATCTTCAGAACTGTTCATCGATGGAATTTACCCCTCCATTTGATTTCTCGCTATTGGGAGATCGCCAGTTCGAATTTTCCCTGTTTTCTTTTTGTTTGTTTGTTTTTTGTTCCTGTTACCCATTATTGGATTTCTGGCTTAGATCTATGATCTTCTGCACCTAAAAGGAAAAGAAACCTCCTCATTTCGATTCTTGTAATCAACTTTTCCTGATTTTGATCTCGAATAATCAAGTTCCTAGCAGAGTTTCTGTTTCTTTTTTTTTTTCCTCTCCTCCAGCGCTCTCAATTATGAGTTATCTGAACTTGGATATAGCTGGATGATCATGTGTGGGTTGGAGGCAAAATCCTTCTTCCTTGCTTACGTTTGGAGATTGAATCATGGTTTTATTAACGAAACTAACTGTGGGGTTAACTCAATTGCAGTAATTTAA

mRNA sequence

ATGGTGAAGGGAAGGCAAGACGACGTCGTAAAGGTGGAAGGATTGGGAGATGGAAGGAGAGTCATGCATTTGAACGGATTTAAGCGTTTGTGTGAAGAAATCCGCAATTGGAGATTGGATGTTGCCGATGGAAATACGGTTGTTCTTCGACAGTCAGAGAAGACGACTCTGAGAGATGGAATTCCGTCCGCTCTCAATTATGAGTTATCTGAACTTGGATATAGCTGGATGATCATGTGTGGGTTGGAGGCAAAATCCTTCTTCCTTGCTTACGTTTGGAGATTGAATCATGGTTTTATTAACGAAACTAACTGTGGGGTTAACTCAATTGCAGTAATTTAA

Coding sequence (CDS)

ATGGTGAAGGGAAGGCAAGACGACGTCGTAAAGGTGGAAGGATTGGGAGATGGAAGGAGAGTCATGCATTTGAACGGATTTAAGCGTTTGTGTGAAGAAATCCGCAATTGGAGATTGGATGTTGCCGATGGAAATACGGTTGTTCTTCGACAGTCAGAGAAGACGACTCTGAGAGATGGAATTCCGTCCGCTCTCAATTATGAGTTATCTGAACTTGGATATAGCTGGATGATCATGTGTGGGTTGGAGGCAAAATCCTTCTTCCTTGCTTACGTTTGGAGATTGAATCATGGTTTTATTAACGAAACTAACTGTGGGGTTAACTCAATTGCAGTAATTTAA

Protein sequence

MVKGRQDDVVKVEGLGDGRRVMHLNGFKRLCEEIRNWRLDVADGNTVVLRQSEKTTLRDGIPSALNYELSELGYSWMIMCGLEAKSFFLAYVWRLNHGFINETNCGVNSIAVI
Homology
[Close]
BLAST of CmoCh01G017620 vs. NCBI nr
Match: KAG7037729.1 (hypothetical protein SDJN02_01359, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 76.3 bits (186), Expect = 1.9e-10
Identity = 35/36 (97.22%), Postives = 36/36 (100.00%), Query Frame = 0 

Query: 1  MVKGRQDDVVKVEGLGDGRRVMHLNGFKRLCEEIRN 37
          MVKGRQDDVVKVEGLGDGRRVMHLNGFKRLCEEIR+
Sbjct: 1  MVKGRQDDVVKVEGLGDGRRVMHLNGFKRLCEEIRS 36

The following BLAST results are available for this feature:
BLAST of CmoCh01G017620 vs.
Match NameE-valueIdentityDescription
BLAST of CmoCh01G017620 vs.
Match NameE-valueIdentityDescription
BLAST of CmoCh01G017620 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG7037729.11.9e-1097.22hypothetical protein SDJN02_01359, partial [Cucurbita argyrosperma subsp. argyro... [more]
BLAST of CmoCh01G017620 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh01G017620.1CmoCh01G017620.1mRNA