CmoCh01G017260 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AGGAAAATGGCACTGTTAAACGCCCTGCAACTCGCACACCAAAATTCCTAACCCACCACATTCACAGAGCTTTCATGTCTTTCTCCGCCACTTTCTCGTCTCCTTTCAATGTCTGTTCACAATCCAGAACAGGTTTCTGCTATTTCCTTGCTTCGCGGCCTTCCATGGCGGCTACTTCGATTCCCTCCGTCAAAACCTCGCTCGGCGCTACAAAGTCAGCTTTTATGCGCAATGATTTGACTCTCCAGTCGTCATCTTCTCGCGGTGTTTTCTCGAAAGCTCAAATTTGTGGTGTAACTGCGAGAGCGGCGTCGGAGAAAAGTATTTATGATTTCACTGTTAAGGTGCTTTTCTGTTTACTCATAATTCTTTTTCGTCTGATCAGTAATTCTTCAATGTTGTTCATCGGGAGTGGCGGATTATGGTTTGGCTACTGTTTTGTTTGTCTGTGCATATTTTAGAATTGTTGTGAAATTCGTTTGATATTCACTTCAGCAAGCATTGATGCTGGTGATAACTATGAATCAGACCGATTAGAGAATTTCAAAATGGATTTTGTTTGAATGTTTGCGGAGTGTAAGGACTGTTTTCTGGTGCAGGATATTGATGGCAAAGATGTTTCTCTGAACAATTTCAAAGGGAAGGTTCTTCTGATAGTAAACGTTGCATCTAGATGGTATTCAACCCTAGCTAAATCTGTTTAGGCTCAATACTTGGATTTAAATTATGCAACTTGATTTTCCTGAAAAGATGATCAAGAATTTGTATGTTGATCATTTCATTGAAGATTTATCTTGTTAATGACAGTGGTTTCGCGACTGGAAATTACTCAGAACTGTCACACTTGTATGAGAAGTACAAAGCTCAAGGTATGGAAGTGTTTTCGTTAGGGCTTTGCAGTATATATTGTCACTCCAAAGAACACCCTCACTCTTGCACCTTGGATGTAAATAGGTTGAGCAGAAGGTCAAGCTCATGAACCTATTCTATCTATTGATAAAGTTGCAGCTAATTCATTGACTCTTTCACTTCCAACTCTGCACTTCTGTCCTTTGACAGAGGTTCAGGAGAAAGAATACCATTTACTTACCGAGTTATTCCAGCCAATCTGACATAGCTTTGTTTTTCCATCAATGGCTGCCTTTCGTTTGCTTATAAGATGGTTACTGAAACGGGGACAGGATAGTTTAGCCTAATTTTGGGTCAATATGCTTCGATAAGTTGTTACACCGATATCCATTTCGAGTTCGTTTCTATCTAGGCGTTTCTAGAATGAAAAATGATATCAACTCTGCTAGGCTGGACATATCCCTAGCGAATGTATGAACCTTTCTTGTTACTACATGTACTATTCCAAGAGCTTGCAAGAACGCACAATAATAGCATCCATGTAGATTATGTATTTTGGAGCTTGGAGTCTAATGATACCTGACTAGTTTGTAGTGTAGTTAGAAGTTTCAGGCTATCGGTGTCTAGTTAAGAGAATCGGTTTCTACTTGGTGTATACTGCATATACTTACGGGCTGTGCGCAATTTACTCATGTTGTTTGGTTAGGTTAGCTTTCACTTACATCTGAATTTATCTCAATCTGTGTGTGTGTTTGTTTGGGAGGGAAGGATTTGAGATTTTGGCTTTTCCTTGCAACCAATTTGGAGGCCAAGAACCTGGGTCCAACCCAGAGATCAAGCAGTTCGCCTGCTCAAGATTCAAAGCAGAGTTCCCAATATTTGACAAGGTACACCAACTGCACGTATTGTCACGGAACGCTTTATAAGGTGAACTTGGCAAAATAGTAATACAATTGTTGCTGCACATCAGGTTGATGTCAATGGTCCAAATACTGCCCCACTCTATCAGTTTCTCAAATCAAGTGCTGGAGGATTCTTAGGCGGTTTTATCAAGTGGAACTTCGAGAAATTTTTGTTGGACAAAAATGGTAATGTTATTGAGAGATACCCACCAACGACATCCCCTCTTCAAATTGAGGTATGACTGATTTTTCCCCCTTTTTTGGGGGACCTTATGAATATAGTTGCATTAGTTTTTGCTATTAAATTGTGTTTGTAACCGCCAGCCGATATTATTCTCTTTGGGCCTTCCCTTTAAACATTCCCCTGTCTGTTAGCTGTTAGCTAGGGAGAGGTTTCTACCCCTTTCAAAGAATGTTTCGTCTTTGGGCCTTCCCAGCTAGGGAGAGGTTTCTACCCCCTTTCAAAGAATGTTTCGTCTTTGGGCCTTCCCTTTAGACATTTCCAGCTAGGGAGAGGTTTCTACTCCTTTTAAAAAATATTTCGTTATCCTCTCCAACGGATGCGGGATCTCACAATCCACCTTTCCTTCGGGACCCAGGATCCTTGCTAGCACTCATTCCCCTCTCCAATCGACGTGGGATCTCATAGTGTTGTTCATCTCTCTCCATTTAACTTTTTCAATGCATATTTCCCAAGTCACTAACTCATAAAGAATCAGTCCTTCCTCCCCTAATATTTTGTATACATTTATAAGAAATGTCCCCCAATTTTGAGCCGAATCCCTAAATATGTTTTCAGTTCTTGTTTGTCACGGGCCATGCATCCACAGCCAACCAGGCTAACCATGCTGGAAAACAAAGTGATTATCAGTTGAAAACACTTCCATAAACTTTAGCTATTCTGATTACGTTTTCTGTTTTTCAGAAAGATATTCAAAGGCTTGTGGCCGCCTAAAATCTAGAGCTGAAGAAGAAGTTTAAATTGCTTTTACGGTCATAGAGGCTCATCCAATGCGAGTTAACCTTTGAGTATGTACATTTCTGTTCCTATAGTGAGGAACCCTATTTATTCTTATAGTGAGGTATTTTGAGAATTAAAAATATTAGTGTGGGAAGTATGCATGAGAGCACAACTCAAGTAAAATAAATGTCTTGGGAGAATATTTTAGGCTTTTTTTTACGGCCTAATCTCCCTGGCATGTTTTCTTCTAACCCTTGCTAGACCTTTTTTGTTATAAAAATTCTCCACTATCTTTACCCTTTTGCCTTCTCTTTGCTCTCGTCCTGCCATTTCTTTTAATTCCCGTCCTAATGCGGCCAAGGGCGTCGATGATTTAAATTTTTCTTTTTCAGTCAGCTGATGCCAGAGAGGGTAGGGGCAGAACACCCACCATTGACGCTGCATAATGTTTAGGGTTTAGGGTTTCGTTTAGGGTTTAGGGTTTTGTTTAGTGTTTAGGGTTTAGGGTATAGGGTAGTGGCAGAGCACTCACCATTGACTATGTCCATTTTCACTG AGGAAAATGGCACTGTTAAACGCCCTGCAACTCGCACACCAAAATTCCTAACCCACCACATTCACAGAGCTTTCATGTCTTTCTCCGCCACTTTCTCGTCTCCTTTCAATGTCTGTTCACAATCCAGAACAGGTTTCTGCTATTTCCTTGCTTCGCGGCCTTCCATGGCGGCTACTTCGATTCCCTCCGTCAAAACCTCGCTCGGCGCTACAAAGTCAGCTTTTATGCGCAATGATTTGACTCTCCAGTCGTCATCTTCTCGCGGTGTTTTCTCGAAAGCTCAAATTTGTGGTGTAACTGCGAGAGCGGCGTCGGAGAAAAGTATTTATGATTTCACTGTTAAGGATATTGATGGCAAAGATGTTTCTCTGAACAATTTCAAAGGGAAGGTTCTTCTGATAGTAAACGTTGCATCTAGATGTGGTTTCGCGACTGGAAATTACTCAGAACTGTCACACTTGTATGAGAAGTACAAAGCTCAAGGATTTGAGATTTTGGCTTTTCCTTGCAACCAATTTGGAGGCCAAGAACCTGGGTCCAACCCAGAGATCAAGCAGTTCGCCTGCTCAAGATTCAAAGCAGAGTTCCCAATATTTGACAAGGTTGATGTCAATGGTCCAAATACTGCCCCACTCTATCAGTTTCTCAAATCAAGTGCTGGAGGATTCTTAGGCGGTTTTATCAAGTGGAACTTCGAGAAATTTTTGTTGGACAAAAATGGTAATGTTATTGAGAGATACCCACCAACGACATCCCCTCTTCAAATTGAGAAAGATATTCAAAGGCTTGTGGCCGCCTAAAATCTAGAGCTGAAGAAGAAGTTTAAATTGCTTTTACGGTCATAGAGGCTCATCCAATGCGAGTTAACCTTTGAGTATGTACATTTCTGTTCCTATAGTGAGGAACCCTATTTATTCTTATAGTGAGGTATTTTGAGAATTAAAAATATTAGTGTGGGAAGTATGCATGAGAGCACAACTCAAGTAAAATAAATGTCTTGGGAGAATATTTTAGGCTTTTTTTTACGGCCTAATCTCCCTGGCATGTTTTCTTCTAACCCTTGCTAGACCTTTTTTGTTATAAAAATTCTCCACTATCTTTACCCTTTTGCCTTCTCTTTGCTCTCGTCCTGCCATTTCTTTTAATTCCCGTCCTAATGCGGCCAAGGGCGTCGATGATTTAAATTTTTCTTTTTCAGTCAGCTGATGCCAGAGAGGGTAGGGGCAGAACACCCACCATTGACGCTGCATAATGTTTAGGGTTTAGGGTTTCGTTTAGGGTTTAGGGTTTTGTTTAGTGTTTAGGGTTTAGGGTATAGGGTAGTGGCAGAGCACTCACCATTGACTATGTCCATTTTCACTG ATGTCTTTCTCCGCCACTTTCTCGTCTCCTTTCAATGTCTGTTCACAATCCAGAACAGGTTTCTGCTATTTCCTTGCTTCGCGGCCTTCCATGGCGGCTACTTCGATTCCCTCCGTCAAAACCTCGCTCGGCGCTACAAAGTCAGCTTTTATGCGCAATGATTTGACTCTCCAGTCGTCATCTTCTCGCGGTGTTTTCTCGAAAGCTCAAATTTGTGGTGTAACTGCGAGAGCGGCGTCGGAGAAAAGTATTTATGATTTCACTGTTAAGGATATTGATGGCAAAGATGTTTCTCTGAACAATTTCAAAGGGAAGGTTCTTCTGATAGTAAACGTTGCATCTAGATGTGGTTTCGCGACTGGAAATTACTCAGAACTGTCACACTTGTATGAGAAGTACAAAGCTCAAGGATTTGAGATTTTGGCTTTTCCTTGCAACCAATTTGGAGGCCAAGAACCTGGGTCCAACCCAGAGATCAAGCAGTTCGCCTGCTCAAGATTCAAAGCAGAGTTCCCAATATTTGACAAGGTTGATGTCAATGGTCCAAATACTGCCCCACTCTATCAGTTTCTCAAATCAAGTGCTGGAGGATTCTTAGGCGGTTTTATCAAGTGGAACTTCGAGAAATTTTTGTTGGACAAAAATGGTAATGTTATTGAGAGATACCCACCAACGACATCCCCTCTTCAAATTGAGAAAGATATTCAAAGGCTTGTGGCCGCCTAA MSFSATFSSPFNVCSQSRTGFCYFLASRPSMAATSIPSVKTSLGATKSAFMRNDLTLQSSSSRGVFSKAQICGVTARAASEKSIYDFTVKDIDGKDVSLNNFKGKVLLIVNVASRCGFATGNYSELSHLYEKYKAQGFEILAFPCNQFGGQEPGSNPEIKQFACSRFKAEFPIFDKVDVNGPNTAPLYQFLKSSAGGFLGGFIKWNFEKFLLDKNGNVIERYPPTTSPLQIEKDIQRLVAA Homology
BLAST of CmoCh01G017260 vs. ExPASy Swiss-Prot
Match: P52032 (Phospholipid hydroperoxide glutathione peroxidase 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=GPX1 PE=2 SV=2) HSP 1 Score: 320.1 bits (819), Expect = 2.2e-86 Identity = 156/217 (71.89%), Postives = 184/217 (84.79%), Query Frame = 0
BLAST of CmoCh01G017260 vs. ExPASy Swiss-Prot
Match: Q9SZ54 (Putative glutathione peroxidase 7, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=GPX7 PE=3 SV=2) HSP 1 Score: 313.9 bits (803), Expect = 1.6e-84 Identity = 163/244 (66.80%), Postives = 194/244 (79.51%), Query Frame = 0
BLAST of CmoCh01G017260 vs. ExPASy Swiss-Prot
Match: O24296 (Phospholipid hydroperoxide glutathione peroxidase, chloroplastic OS=Pisum sativum OX=3888 PE=2 SV=1) HSP 1 Score: 306.6 bits (784), Expect = 2.5e-82 Identity = 154/242 (63.64%), Postives = 187/242 (77.27%), Query Frame = 0
BLAST of CmoCh01G017260 vs. ExPASy Swiss-Prot
Match: O48646 (Probable phospholipid hydroperoxide glutathione peroxidase 6, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=GPX6 PE=2 SV=2) HSP 1 Score: 248.1 bits (632), Expect = 1.0e-64 Identity = 113/164 (68.90%), Postives = 135/164 (82.32%), Query Frame = 0
BLAST of CmoCh01G017260 vs. ExPASy Swiss-Prot
Match: Q06652 (Probable phospholipid hydroperoxide glutathione peroxidase OS=Citrus sinensis OX=2711 GN=CSA PE=1 SV=1) HSP 1 Score: 246.9 bits (629), Expect = 2.3e-64 Identity = 113/160 (70.62%), Postives = 133/160 (83.12%), Query Frame = 0
BLAST of CmoCh01G017260 vs. ExPASy TrEMBL
Match: A0A6J1FIU9 (Glutathione peroxidase OS=Cucurbita moschata OX=3662 GN=LOC111445778 PE=3 SV=1) HSP 1 Score: 483.4 bits (1243), Expect = 5.5e-133 Identity = 241/241 (100.00%), Postives = 241/241 (100.00%), Query Frame = 0
BLAST of CmoCh01G017260 vs. ExPASy TrEMBL
Match: A0A6J1IYJ2 (Glutathione peroxidase OS=Cucurbita maxima OX=3661 GN=LOC111481070 PE=3 SV=1) HSP 1 Score: 461.8 bits (1187), Expect = 1.7e-126 Identity = 231/241 (95.85%), Postives = 235/241 (97.51%), Query Frame = 0
BLAST of CmoCh01G017260 vs. ExPASy TrEMBL
Match: A0A6J1F6Q7 (Glutathione peroxidase OS=Cucurbita moschata OX=3662 GN=LOC111442660 PE=3 SV=1) HSP 1 Score: 409.5 bits (1051), Expect = 1.0e-110 Identity = 205/241 (85.06%), Postives = 217/241 (90.04%), Query Frame = 0
BLAST of CmoCh01G017260 vs. ExPASy TrEMBL
Match: A0A345BTE8 (Glutathione peroxidase OS=Cucurbita pepo OX=3663 PE=2 SV=1) HSP 1 Score: 409.5 bits (1051), Expect = 1.0e-110 Identity = 205/241 (85.06%), Postives = 217/241 (90.04%), Query Frame = 0
BLAST of CmoCh01G017260 vs. ExPASy TrEMBL
Match: A0A6J1ILB6 (Glutathione peroxidase OS=Cucurbita maxima OX=3661 GN=LOC111477267 PE=3 SV=1) HSP 1 Score: 406.4 bits (1043), Expect = 8.5e-110 Identity = 203/241 (84.23%), Postives = 215/241 (89.21%), Query Frame = 0
BLAST of CmoCh01G017260 vs. NCBI nr
Match: XP_022940019.1 (probable phospholipid hydroperoxide glutathione peroxidase [Cucurbita moschata]) HSP 1 Score: 483.4 bits (1243), Expect = 1.1e-132 Identity = 241/241 (100.00%), Postives = 241/241 (100.00%), Query Frame = 0
BLAST of CmoCh01G017260 vs. NCBI nr
Match: KAG6608313.1 (Phospholipid hydroperoxide glutathione peroxidase 1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 471.1 bits (1211), Expect = 5.8e-129 Identity = 236/241 (97.93%), Postives = 237/241 (98.34%), Query Frame = 0
BLAST of CmoCh01G017260 vs. NCBI nr
Match: XP_022982151.1 (probable phospholipid hydroperoxide glutathione peroxidase [Cucurbita maxima]) HSP 1 Score: 461.8 bits (1187), Expect = 3.5e-126 Identity = 231/241 (95.85%), Postives = 235/241 (97.51%), Query Frame = 0
BLAST of CmoCh01G017260 vs. NCBI nr
Match: XP_023524354.1 (probable phospholipid hydroperoxide glutathione peroxidase [Cucurbita pepo subsp. pepo]) HSP 1 Score: 456.4 bits (1173), Expect = 1.5e-124 Identity = 229/241 (95.02%), Postives = 235/241 (97.51%), Query Frame = 0
BLAST of CmoCh01G017260 vs. NCBI nr
Match: XP_038897705.1 (probable phospholipid hydroperoxide glutathione peroxidase [Benincasa hispida]) HSP 1 Score: 409.8 bits (1052), Expect = 1.6e-110 Identity = 203/241 (84.23%), Postives = 217/241 (90.04%), Query Frame = 0
BLAST of CmoCh01G017260 vs. TAIR 10
Match: AT2G25080.1 (glutathione peroxidase 1 ) HSP 1 Score: 320.1 bits (819), Expect = 1.5e-87 Identity = 156/217 (71.89%), Postives = 184/217 (84.79%), Query Frame = 0
BLAST of CmoCh01G017260 vs. TAIR 10
Match: AT4G31870.1 (glutathione peroxidase 7 ) HSP 1 Score: 313.9 bits (803), Expect = 1.1e-85 Identity = 163/244 (66.80%), Postives = 194/244 (79.51%), Query Frame = 0
BLAST of CmoCh01G017260 vs. TAIR 10
Match: AT4G11600.1 (glutathione peroxidase 6 ) HSP 1 Score: 248.1 bits (632), Expect = 7.4e-66 Identity = 113/164 (68.90%), Postives = 135/164 (82.32%), Query Frame = 0
BLAST of CmoCh01G017260 vs. TAIR 10
Match: AT2G43350.1 (glutathione peroxidase 3 ) HSP 1 Score: 243.4 bits (620), Expect = 1.8e-64 Identity = 112/162 (69.14%), Postives = 131/162 (80.86%), Query Frame = 0
BLAST of CmoCh01G017260 vs. TAIR 10
Match: AT2G43350.2 (glutathione peroxidase 3 ) HSP 1 Score: 243.4 bits (620), Expect = 1.8e-64 Identity = 112/162 (69.14%), Postives = 131/162 (80.86%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|