CmoCh01G015160 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh01G015160
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionMetallocarboxypeptidase inhibitor
LocationCmo_Chr01: 11711430 .. 11712231 (-)
RNA-Seq ExpressionCmoCh01G015160
SyntenyCmoCh01G015160
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAATAGATGGCGAGTGCCTAATCGAATTGATCGGGTCATGTAGGAACAAGGTTCAAGTCTACCGGTCTGTTAGGATGCCTCAGCTGCATACATCACTGCACTTCCACTTGACACCTATCGTGATGATAAACGGCTCATCTCGCCGTGACCTTCTCTTGAATTCTCAAAACTTCTGTCGCTCCATCCCCGCAGGGGCAGAGAACCCATCGCTGTCTCGGCTGTGCTACCGGAGGCTCTGGGGAAGTCGGAATAGGAGAGCACTCATCTTGGGGTGGGCTTACTACTTAGATGCTTTCAGCAGTTATCCGCTCCGCACTTGGCTACCCAGCGTTTACCGTGGGCACGATAACTGGTACACCAGAGGTGCGTCCTTCCCGGTCCTCTCGTACTAGGGAAAGGTCCTCTCAATGCTCTAACGCCCACACCGGATATGGACCGAACTGTCTCACGACGTTCTGAACCCAGCTCACGTACCGCTTTAATGGGCGAACAGCCCAACCCTTGGAACATACTACAGCCCCAGGTGGCGAAGAGCCGACATCGAGGTGCCAAACCTTCCCGTCGATGTGAGCTCTTGGGGAAGATCAGCCTGTTATCCCTAGAGTAACTTTTATCCGTTGAGCGACGGCCCTTCCACTCGGCACCGTCGGATCACTAAGGCCGACTTTCGTCCCTGCTCGACGGGTGGGTCTTGCAGTCAAGCTCCCTTCTGCCTTTGCACTCGAGGGCCAATCTCCGTCTGGCCCGAGGAAACCTTTGCACGCCTCCGTTACCTTTTGGGAGGCCTACGCCCCATAG

mRNA sequence

ATGAAAATAGATGGCGAGTGCCTAATCGAATTGATCGGGTCATGTAGGAACAAGGTTCAAGTCTACCGGTCTGTTAGGATGCCTCAGCTGCATACATCACTGCACTTCCACTTGACACCTATCGTGATGATAAACGGCTCATCTCGCCGTGACCTTCTCTTGAATTCTCAAAACTTCTGTCGCTCCATCCCCGCAGGGGCAGAGAACCCATCGCTGTCTCGGCTGTGCTACCGGAGGCTCTGGGGAAGTCGGAATAGGAGAGCACTCATCTTGGGGTGGGCTTACTACTTAGATGCTTTCAGCAGTTATCCGCTCCGCACTTGGCTACCCAGCGTTTACCGTGGGCACGATAACTGGTACACCAGAGCGACGGCCCTTCCACTCGGCACCGTCGGATCACTAAGGCCGACTTTCGTCCCTGCTCGACGGGTGGGTCTTGCAGTCAAGCTCCCTTCTGCCTTTGCACTCGAGGGCCAATCTCCGTCTGGCCCGAGGAAACCTTTGCACGCCTCCGTTACCTTTTGGGAGGCCTACGCCCCATAG

Coding sequence (CDS)

ATGAAAATAGATGGCGAGTGCCTAATCGAATTGATCGGGTCATGTAGGAACAAGGTTCAAGTCTACCGGTCTGTTAGGATGCCTCAGCTGCATACATCACTGCACTTCCACTTGACACCTATCGTGATGATAAACGGCTCATCTCGCCGTGACCTTCTCTTGAATTCTCAAAACTTCTGTCGCTCCATCCCCGCAGGGGCAGAGAACCCATCGCTGTCTCGGCTGTGCTACCGGAGGCTCTGGGGAAGTCGGAATAGGAGAGCACTCATCTTGGGGTGGGCTTACTACTTAGATGCTTTCAGCAGTTATCCGCTCCGCACTTGGCTACCCAGCGTTTACCGTGGGCACGATAACTGGTACACCAGAGCGACGGCCCTTCCACTCGGCACCGTCGGATCACTAAGGCCGACTTTCGTCCCTGCTCGACGGGTGGGTCTTGCAGTCAAGCTCCCTTCTGCCTTTGCACTCGAGGGCCAATCTCCGTCTGGCCCGAGGAAACCTTTGCACGCCTCCGTTACCTTTTGGGAGGCCTACGCCCCATAG

Protein sequence

MKIDGECLIELIGSCRNKVQVYRSVRMPQLHTSLHFHLTPIVMINGSSRRDLLLNSQNFCRSIPAGAENPSLSRLCYRRLWGSRNRRALILGWAYYLDAFSSYPLRTWLPSVYRGHDNWYTRATALPLGTVGSLRPTFVPARRVGLAVKLPSAFALEGQSPSGPRKPLHASVTFWEAYAP
Homology
BLAST of CmoCh01G015160 vs. ExPASy TrEMBL
Match: A0A2N9GA72 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS23936 PE=4 SV=1)

HSP 1 Score: 374.4 bits (960), Expect = 2.7e-100
Identity = 179/180 (99.44%), Postives = 179/180 (99.44%), Query Frame = 0

Query: 1   MKIDGECLIELIGSCRNKVQVYRSVRMPQLHTSLHFHLTPIVMINGSSRRDLLLNSQNFC 60
           MKIDGECLIELIGSCRNKVQVYRSVRMPQLHTSLHFHLTPIVMINGSSRRDLLLNSQNFC
Sbjct: 1   MKIDGECLIELIGSCRNKVQVYRSVRMPQLHTSLHFHLTPIVMINGSSRRDLLLNSQNFC 60

Query: 61  RSIPAGAENPSLSRLCYRRLWGSRNRRALILGWAYYLDAFSSYPLRTWLPSVYRGHDNWY 120
           RSIPAGAENPSLSRLCYRRLWGSRNRRALILGWAYYLDAFSSYPLRTWLPSVYRGHDNWY
Sbjct: 61  RSIPAGAENPSLSRLCYRRLWGSRNRRALILGWAYYLDAFSSYPLRTWLPSVYRGHDNWY 120

Query: 121 TRATALPLGTVGSLRPTFVPARRVGLAVKLPSAFALEGQSPSGPRKPLHASVTFWEAYAP 180
           TRATALPLGTVGSLRPTFVPARRVGLAVKLPSAFALEGQSPSGPRKPLHASVTFWEAY P
Sbjct: 121 TRATALPLGTVGSLRPTFVPARRVGLAVKLPSAFALEGQSPSGPRKPLHASVTFWEAYEP 180

BLAST of CmoCh01G015160 vs. ExPASy TrEMBL
Match: A0A5N6N798 (DNA-directed RNA polymerase OS=Mikania micrantha OX=192012 GN=E3N88_25336 PE=3 SV=1)

HSP 1 Score: 369.8 bits (948), Expect = 6.6e-99
Identity = 176/180 (97.78%), Postives = 178/180 (98.89%), Query Frame = 0

Query: 1   MKIDGECLIELIGSCRNKVQVYRSVRMPQLHTSLHFHLTPIVMINGSSRRDLLLNSQNFC 60
           + +DGEC IELIGSCRNKVQVYRSVRMPQLHTSLHFHLTPIVMINGSSRRDLLLNSQNFC
Sbjct: 303 LDVDGECPIELIGSCRNKVQVYRSVRMPQLHTSLHFHLTPIVMINGSSRRDLLLNSQNFC 362

Query: 61  RSIPAGAENPSLSRLCYRRLWGSRNRRALILGWAYYLDAFSSYPLRTWLPSVYRGHDNWY 120
           RSIPAGAENPSLSRLCYRRLWGSRNRRALILGWAYYLDAFSSYPLRTWLPSVYRGHDNWY
Sbjct: 363 RSIPAGAENPSLSRLCYRRLWGSRNRRALILGWAYYLDAFSSYPLRTWLPSVYRGHDNWY 422

Query: 121 TRATALPLGTVGSLRPTFVPARRVGLAVKLPSAFALEGQSPSGPRKPLHASVTFWEAYAP 180
           TRATALPLGTVGSLRPTFVPARRVGLAVKLPSAFALEGQSPSGPRKPLHASVTFWEAYAP
Sbjct: 423 TRATALPLGTVGSLRPTFVPARRVGLAVKLPSAFALEGQSPSGPRKPLHASVTFWEAYAP 482

BLAST of CmoCh01G015160 vs. ExPASy TrEMBL
Match: A0A2Z7CD85 (Metallocarboxypeptidase inhibitor OS=Dorcoceras hygrometricum OX=472368 GN=F511_24659 PE=4 SV=1)

HSP 1 Score: 367.9 bits (943), Expect = 2.5e-98
Identity = 177/180 (98.33%), Postives = 178/180 (98.89%), Query Frame = 0

Query: 1   MKIDGECLIELIGSCRNKVQVYRSVRMPQLHTSLHFHLTPIVMINGSSRRDLLLNSQNFC 60
           MKIDGECLIELI SCRNKVQVYRSVRMPQLHTSLHFHLTPIVMINGSSRRDLLLNSQNF 
Sbjct: 1   MKIDGECLIELIRSCRNKVQVYRSVRMPQLHTSLHFHLTPIVMINGSSRRDLLLNSQNFY 60

Query: 61  RSIPAGAENPSLSRLCYRRLWGSRNRRALILGWAYYLDAFSSYPLRTWLPSVYRGHDNWY 120
           RSIPAGAENPSLSRLCYR+LWGSRNRRALILGWAYYLDAFSSYPLRTWLPSVYRGHDNWY
Sbjct: 61  RSIPAGAENPSLSRLCYRKLWGSRNRRALILGWAYYLDAFSSYPLRTWLPSVYRGHDNWY 120

Query: 121 TRATALPLGTVGSLRPTFVPARRVGLAVKLPSAFALEGQSPSGPRKPLHASVTFWEAYAP 180
           TRATALPLGTVGSLRPTFVPARRVGLAVKLPSAFALEGQSPSGPRKPLHASVTFWEAYAP
Sbjct: 121 TRATALPLGTVGSLRPTFVPARRVGLAVKLPSAFALEGQSPSGPRKPLHASVTFWEAYAP 180

BLAST of CmoCh01G015160 vs. ExPASy TrEMBL
Match: W9SEP0 (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_000614 PE=4 SV=1)

HSP 1 Score: 342.4 bits (877), Expect = 1.1e-90
Identity = 167/182 (91.76%), Postives = 171/182 (93.96%), Query Frame = 0

Query: 1   MKIDGECLIELIGSCRNKVQVYR--SVRMPQLHTSLHFHLTPIVMINGSSRRDLLLNSQN 60
           MKIDGECLIELIGSCRNKVQVYR   VRMPQLHTSLHFHLTPIVMINGSSRRDLLLNSQN
Sbjct: 1   MKIDGECLIELIGSCRNKVQVYRCIPVRMPQLHTSLHFHLTPIVMINGSSRRDLLLNSQN 60

Query: 61  FCRSIPAGAENPSLSRLCYRRLWGSRNRRALILGWAYYLDAFSSYPLRTWLPSVYRGHDN 120
           F  S PAGAENPSLS LCYRRLWGSRN+RALILGWAY+LDAF+SYPL TWLPSVYRGHDN
Sbjct: 61  FYHSTPAGAENPSLSWLCYRRLWGSRNKRALILGWAYFLDAFNSYPLHTWLPSVYRGHDN 120

Query: 121 WYTRATALPLGTVGSLRPTFVPARRVGLAVKLPSAFALEGQSPSGPRKPLHASVTFWEAY 180
           WYTRATALP GTVGSLR TFVPAR VGLA+KLPSAFALEGQSPSGPRKPLHASVTFWEAY
Sbjct: 121 WYTRATALPPGTVGSLRLTFVPARWVGLAIKLPSAFALEGQSPSGPRKPLHASVTFWEAY 180

BLAST of CmoCh01G015160 vs. ExPASy TrEMBL
Match: A0A5N6PW49 (Ribosomal_L16 domain-containing protein OS=Mikania micrantha OX=192012 GN=E3N88_04276 PE=3 SV=1)

HSP 1 Score: 340.5 bits (872), Expect = 4.3e-90
Identity = 164/168 (97.62%), Postives = 165/168 (98.21%), Query Frame = 0

Query: 7   CLIELIGSCRNKVQVYRSVRMPQLHTSLHFHLTPIVMINGSSRRDLLLNSQNFCRSIPAG 66
           C IELIGSCRNKVQVYRSVRMPQLHTSLHFHLTPIVMIN SSRRDLLLNSQNFCRSIPAG
Sbjct: 407 CPIELIGSCRNKVQVYRSVRMPQLHTSLHFHLTPIVMINDSSRRDLLLNSQNFCRSIPAG 466

Query: 67  AENPSLSRLCYRRLWGSRNRRALILGWAYYLDAFSSYPLRTWLPSVYRGHDNWYTRATAL 126
           AENPSLSRLCYRRLWGSRNRRALILGWAYYLDAFSSYPLRTWLPSVYRGHDNWYTRATAL
Sbjct: 467 AENPSLSRLCYRRLWGSRNRRALILGWAYYLDAFSSYPLRTWLPSVYRGHDNWYTRATAL 526

Query: 127 PLGTVGSLRPTFVPARRVGLAVKLPSAFALEGQSPSGPRKPLHASVTF 175
           PLGTVGSLRPTFVPARRVGLAVKLPSAFALEGQSPSGPRKPLHAS+ F
Sbjct: 527 PLGTVGSLRPTFVPARRVGLAVKLPSAFALEGQSPSGPRKPLHASLPF 574

BLAST of CmoCh01G015160 vs. NCBI nr
Match: KAG8363222.1 (hypothetical protein BUALT_BualtPtG0005600 [Buddleja alternifolia])

HSP 1 Score: 372.1 bits (954), Expect = 2.7e-99
Identity = 178/180 (98.89%), Postives = 179/180 (99.44%), Query Frame = 0

Query: 1   MKIDGECLIELIGSCRNKVQVYRSVRMPQLHTSLHFHLTPIVMINGSSRRDLLLNSQNFC 60
           MKIDGECLIELI SCRNKVQVYRSVRMPQLHTSLHFHLTPIVMINGSSRRDLLLNSQNFC
Sbjct: 1   MKIDGECLIELIRSCRNKVQVYRSVRMPQLHTSLHFHLTPIVMINGSSRRDLLLNSQNFC 60

Query: 61  RSIPAGAENPSLSRLCYRRLWGSRNRRALILGWAYYLDAFSSYPLRTWLPSVYRGHDNWY 120
           RSIPAGAENPSLSRLCYR+LWGSRNRRALILGWAYYLDAFSSYPLRTWLPSVYRGHDNWY
Sbjct: 61  RSIPAGAENPSLSRLCYRKLWGSRNRRALILGWAYYLDAFSSYPLRTWLPSVYRGHDNWY 120

Query: 121 TRATALPLGTVGSLRPTFVPARRVGLAVKLPSAFALEGQSPSGPRKPLHASVTFWEAYAP 180
           TRATALPLGTVGSLRPTFVPARRVGLAVKLPSAFALEGQSPSGPRKPLHASVTFWEAYAP
Sbjct: 121 TRATALPLGTVGSLRPTFVPARRVGLAVKLPSAFALEGQSPSGPRKPLHASVTFWEAYAP 180

BLAST of CmoCh01G015160 vs. NCBI nr
Match: KAD4385168.1 (hypothetical protein E3N88_25336 [Mikania micrantha])

HSP 1 Score: 369.8 bits (948), Expect = 1.4e-98
Identity = 176/180 (97.78%), Postives = 178/180 (98.89%), Query Frame = 0

Query: 1   MKIDGECLIELIGSCRNKVQVYRSVRMPQLHTSLHFHLTPIVMINGSSRRDLLLNSQNFC 60
           + +DGEC IELIGSCRNKVQVYRSVRMPQLHTSLHFHLTPIVMINGSSRRDLLLNSQNFC
Sbjct: 303 LDVDGECPIELIGSCRNKVQVYRSVRMPQLHTSLHFHLTPIVMINGSSRRDLLLNSQNFC 362

Query: 61  RSIPAGAENPSLSRLCYRRLWGSRNRRALILGWAYYLDAFSSYPLRTWLPSVYRGHDNWY 120
           RSIPAGAENPSLSRLCYRRLWGSRNRRALILGWAYYLDAFSSYPLRTWLPSVYRGHDNWY
Sbjct: 363 RSIPAGAENPSLSRLCYRRLWGSRNRRALILGWAYYLDAFSSYPLRTWLPSVYRGHDNWY 422

Query: 121 TRATALPLGTVGSLRPTFVPARRVGLAVKLPSAFALEGQSPSGPRKPLHASVTFWEAYAP 180
           TRATALPLGTVGSLRPTFVPARRVGLAVKLPSAFALEGQSPSGPRKPLHASVTFWEAYAP
Sbjct: 423 TRATALPLGTVGSLRPTFVPARRVGLAVKLPSAFALEGQSPSGPRKPLHASVTFWEAYAP 482

BLAST of CmoCh01G015160 vs. NCBI nr
Match: KZV45021.1 (Metallocarboxypeptidase inhibitor [Dorcoceras hygrometricum])

HSP 1 Score: 367.9 bits (943), Expect = 5.2e-98
Identity = 177/180 (98.33%), Postives = 178/180 (98.89%), Query Frame = 0

Query: 1   MKIDGECLIELIGSCRNKVQVYRSVRMPQLHTSLHFHLTPIVMINGSSRRDLLLNSQNFC 60
           MKIDGECLIELI SCRNKVQVYRSVRMPQLHTSLHFHLTPIVMINGSSRRDLLLNSQNF 
Sbjct: 1   MKIDGECLIELIRSCRNKVQVYRSVRMPQLHTSLHFHLTPIVMINGSSRRDLLLNSQNFY 60

Query: 61  RSIPAGAENPSLSRLCYRRLWGSRNRRALILGWAYYLDAFSSYPLRTWLPSVYRGHDNWY 120
           RSIPAGAENPSLSRLCYR+LWGSRNRRALILGWAYYLDAFSSYPLRTWLPSVYRGHDNWY
Sbjct: 61  RSIPAGAENPSLSRLCYRKLWGSRNRRALILGWAYYLDAFSSYPLRTWLPSVYRGHDNWY 120

Query: 121 TRATALPLGTVGSLRPTFVPARRVGLAVKLPSAFALEGQSPSGPRKPLHASVTFWEAYAP 180
           TRATALPLGTVGSLRPTFVPARRVGLAVKLPSAFALEGQSPSGPRKPLHASVTFWEAYAP
Sbjct: 121 TRATALPLGTVGSLRPTFVPARRVGLAVKLPSAFALEGQSPSGPRKPLHASVTFWEAYAP 180

BLAST of CmoCh01G015160 vs. NCBI nr
Match: KAG8363223.1 (hypothetical protein BUALT_BualtPtG0005800 [Buddleja alternifolia])

HSP 1 Score: 348.6 bits (893), Expect = 3.2e-92
Identity = 166/167 (99.40%), Postives = 167/167 (100.00%), Query Frame = 0

Query: 14   SCRNKVQVYRSVRMPQLHTSLHFHLTPIVMINGSSRRDLLLNSQNFCRSIPAGAENPSLS 73
            SCRNKVQVYRSVRMPQLHTSLHFHLTPIVMINGSSRRDLLLNSQNFCRSIPAGAENPSLS
Sbjct: 972  SCRNKVQVYRSVRMPQLHTSLHFHLTPIVMINGSSRRDLLLNSQNFCRSIPAGAENPSLS 1031

Query: 74   RLCYRRLWGSRNRRALILGWAYYLDAFSSYPLRTWLPSVYRGHDNWYTRATALPLGTVGS 133
            RLCYR+LWGSRNRRALILGWAYYLDAFSSYPLRTWLPSVYRGHDNWYTRATALPLGTVGS
Sbjct: 1032 RLCYRKLWGSRNRRALILGWAYYLDAFSSYPLRTWLPSVYRGHDNWYTRATALPLGTVGS 1091

Query: 134  LRPTFVPARRVGLAVKLPSAFALEGQSPSGPRKPLHASVTFWEAYAP 181
            LRPTFVPARRVGLAVKLPSAFALEGQSPSGPRKPLHASVTFWEAYAP
Sbjct: 1092 LRPTFVPARRVGLAVKLPSAFALEGQSPSGPRKPLHASVTFWEAYAP 1138

BLAST of CmoCh01G015160 vs. NCBI nr
Match: EXC50692.1 (hypothetical protein L484_000614 [Morus notabilis])

HSP 1 Score: 342.4 bits (877), Expect = 2.3e-90
Identity = 167/182 (91.76%), Postives = 171/182 (93.96%), Query Frame = 0

Query: 1   MKIDGECLIELIGSCRNKVQVYR--SVRMPQLHTSLHFHLTPIVMINGSSRRDLLLNSQN 60
           MKIDGECLIELIGSCRNKVQVYR   VRMPQLHTSLHFHLTPIVMINGSSRRDLLLNSQN
Sbjct: 1   MKIDGECLIELIGSCRNKVQVYRCIPVRMPQLHTSLHFHLTPIVMINGSSRRDLLLNSQN 60

Query: 61  FCRSIPAGAENPSLSRLCYRRLWGSRNRRALILGWAYYLDAFSSYPLRTWLPSVYRGHDN 120
           F  S PAGAENPSLS LCYRRLWGSRN+RALILGWAY+LDAF+SYPL TWLPSVYRGHDN
Sbjct: 61  FYHSTPAGAENPSLSWLCYRRLWGSRNKRALILGWAYFLDAFNSYPLHTWLPSVYRGHDN 120

Query: 121 WYTRATALPLGTVGSLRPTFVPARRVGLAVKLPSAFALEGQSPSGPRKPLHASVTFWEAY 180
           WYTRATALP GTVGSLR TFVPAR VGLA+KLPSAFALEGQSPSGPRKPLHASVTFWEAY
Sbjct: 121 WYTRATALPPGTVGSLRLTFVPARWVGLAIKLPSAFALEGQSPSGPRKPLHASVTFWEAY 180

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A2N9GA722.7e-10099.44Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS23936 PE=4 SV=1[more]
A0A5N6N7986.6e-9997.78DNA-directed RNA polymerase OS=Mikania micrantha OX=192012 GN=E3N88_25336 PE=3 S... [more]
A0A2Z7CD852.5e-9898.33Metallocarboxypeptidase inhibitor OS=Dorcoceras hygrometricum OX=472368 GN=F511_... [more]
W9SEP01.1e-9091.76Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_000614 PE=4 SV=1[more]
A0A5N6PW494.3e-9097.62Ribosomal_L16 domain-containing protein OS=Mikania micrantha OX=192012 GN=E3N88_... [more]
Match NameE-valueIdentityDescription
KAG8363222.12.7e-9998.89hypothetical protein BUALT_BualtPtG0005600 [Buddleja alternifolia][more]
KAD4385168.11.4e-9897.78hypothetical protein E3N88_25336 [Mikania micrantha][more]
KZV45021.15.2e-9898.33Metallocarboxypeptidase inhibitor [Dorcoceras hygrometricum][more]
KAG8363223.13.2e-9299.40hypothetical protein BUALT_BualtPtG0005800 [Buddleja alternifolia][more]
EXC50692.12.3e-9091.76hypothetical protein L484_000614 [Morus notabilis][more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh01G015160.1CmoCh01G015160.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015074 DNA integration
biological_process GO:0006412 translation
cellular_component GO:0009507 chloroplast
cellular_component GO:0015934 large ribosomal subunit
molecular_function GO:0019843 rRNA binding
molecular_function GO:0003735 structural constituent of ribosome