Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAATAGATGGCGAGTGCCTAATCGAATTGATCGGGTCATGTAGGAACAAGGTTCAAGTCTACCGGTCTGTTAGGATGCCTCAGCTGCATACATCACTGCACTTCCACTTGACACCTATCGTGATGATAAACGGCTCATCTCGCCGTGACCTTCTCTTGAATTCTCAAAACTTCTGTCGCTCCATCCCCGCAGGGGCAGAGAACCCATCGCTGTCTCGGCTGTGCTACCGGAGGCTCTGGGGAAGTCGGAATAGGAGAGCACTCATCTTGGGGTGGGCTTACTACTTAGATGCTTTCAGCAGTTATCCGCTCCGCACTTGGCTACCCAGCGTTTACCGTGGGCACGATAACTGGTACACCAGAGGTGCGTCCTTCCCGGTCCTCTCGTACTAGGGAAAGGTCCTCTCAATGCTCTAACGCCCACACCGGATATGGACCGAACTGTCTCACGACGTTCTGAACCCAGCTCACGTACCGCTTTAATGGGCGAACAGCCCAACCCTTGGAACATACTACAGCCCCAGGTGGCGAAGAGCCGACATCGAGGTGCCAAACCTTCCCGTCGATGTGAGCTCTTGGGGAAGATCAGCCTGTTATCCCTAGAGTAACTTTTATCCGTTGAGCGACGGCCCTTCCACTCGGCACCGTCGGATCACTAAGGCCGACTTTCGTCCCTGCTCGACGGGTGGGTCTTGCAGTCAAGCTCCCTTCTGCCTTTGCACTCGAGGGCCAATCTCCGTCTGGCCCGAGGAAACCTTTGCACGCCTCCGTTACCTTTTGGGAGGCCTACGCCCCATAG
mRNA sequence
ATGAAAATAGATGGCGAGTGCCTAATCGAATTGATCGGGTCATGTAGGAACAAGGTTCAAGTCTACCGGTCTGTTAGGATGCCTCAGCTGCATACATCACTGCACTTCCACTTGACACCTATCGTGATGATAAACGGCTCATCTCGCCGTGACCTTCTCTTGAATTCTCAAAACTTCTGTCGCTCCATCCCCGCAGGGGCAGAGAACCCATCGCTGTCTCGGCTGTGCTACCGGAGGCTCTGGGGAAGTCGGAATAGGAGAGCACTCATCTTGGGGTGGGCTTACTACTTAGATGCTTTCAGCAGTTATCCGCTCCGCACTTGGCTACCCAGCGTTTACCGTGGGCACGATAACTGGTACACCAGAGCGACGGCCCTTCCACTCGGCACCGTCGGATCACTAAGGCCGACTTTCGTCCCTGCTCGACGGGTGGGTCTTGCAGTCAAGCTCCCTTCTGCCTTTGCACTCGAGGGCCAATCTCCGTCTGGCCCGAGGAAACCTTTGCACGCCTCCGTTACCTTTTGGGAGGCCTACGCCCCATAG
Coding sequence (CDS)
ATGAAAATAGATGGCGAGTGCCTAATCGAATTGATCGGGTCATGTAGGAACAAGGTTCAAGTCTACCGGTCTGTTAGGATGCCTCAGCTGCATACATCACTGCACTTCCACTTGACACCTATCGTGATGATAAACGGCTCATCTCGCCGTGACCTTCTCTTGAATTCTCAAAACTTCTGTCGCTCCATCCCCGCAGGGGCAGAGAACCCATCGCTGTCTCGGCTGTGCTACCGGAGGCTCTGGGGAAGTCGGAATAGGAGAGCACTCATCTTGGGGTGGGCTTACTACTTAGATGCTTTCAGCAGTTATCCGCTCCGCACTTGGCTACCCAGCGTTTACCGTGGGCACGATAACTGGTACACCAGAGCGACGGCCCTTCCACTCGGCACCGTCGGATCACTAAGGCCGACTTTCGTCCCTGCTCGACGGGTGGGTCTTGCAGTCAAGCTCCCTTCTGCCTTTGCACTCGAGGGCCAATCTCCGTCTGGCCCGAGGAAACCTTTGCACGCCTCCGTTACCTTTTGGGAGGCCTACGCCCCATAG
Protein sequence
MKIDGECLIELIGSCRNKVQVYRSVRMPQLHTSLHFHLTPIVMINGSSRRDLLLNSQNFCRSIPAGAENPSLSRLCYRRLWGSRNRRALILGWAYYLDAFSSYPLRTWLPSVYRGHDNWYTRATALPLGTVGSLRPTFVPARRVGLAVKLPSAFALEGQSPSGPRKPLHASVTFWEAYAP
Homology
BLAST of CmoCh01G015160 vs. ExPASy TrEMBL
Match:
A0A2N9GA72 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS23936 PE=4 SV=1)
HSP 1 Score: 374.4 bits (960), Expect = 2.7e-100
Identity = 179/180 (99.44%), Postives = 179/180 (99.44%), Query Frame = 0
Query: 1 MKIDGECLIELIGSCRNKVQVYRSVRMPQLHTSLHFHLTPIVMINGSSRRDLLLNSQNFC 60
MKIDGECLIELIGSCRNKVQVYRSVRMPQLHTSLHFHLTPIVMINGSSRRDLLLNSQNFC
Sbjct: 1 MKIDGECLIELIGSCRNKVQVYRSVRMPQLHTSLHFHLTPIVMINGSSRRDLLLNSQNFC 60
Query: 61 RSIPAGAENPSLSRLCYRRLWGSRNRRALILGWAYYLDAFSSYPLRTWLPSVYRGHDNWY 120
RSIPAGAENPSLSRLCYRRLWGSRNRRALILGWAYYLDAFSSYPLRTWLPSVYRGHDNWY
Sbjct: 61 RSIPAGAENPSLSRLCYRRLWGSRNRRALILGWAYYLDAFSSYPLRTWLPSVYRGHDNWY 120
Query: 121 TRATALPLGTVGSLRPTFVPARRVGLAVKLPSAFALEGQSPSGPRKPLHASVTFWEAYAP 180
TRATALPLGTVGSLRPTFVPARRVGLAVKLPSAFALEGQSPSGPRKPLHASVTFWEAY P
Sbjct: 121 TRATALPLGTVGSLRPTFVPARRVGLAVKLPSAFALEGQSPSGPRKPLHASVTFWEAYEP 180
BLAST of CmoCh01G015160 vs. ExPASy TrEMBL
Match:
A0A5N6N798 (DNA-directed RNA polymerase OS=Mikania micrantha OX=192012 GN=E3N88_25336 PE=3 SV=1)
HSP 1 Score: 369.8 bits (948), Expect = 6.6e-99
Identity = 176/180 (97.78%), Postives = 178/180 (98.89%), Query Frame = 0
Query: 1 MKIDGECLIELIGSCRNKVQVYRSVRMPQLHTSLHFHLTPIVMINGSSRRDLLLNSQNFC 60
+ +DGEC IELIGSCRNKVQVYRSVRMPQLHTSLHFHLTPIVMINGSSRRDLLLNSQNFC
Sbjct: 303 LDVDGECPIELIGSCRNKVQVYRSVRMPQLHTSLHFHLTPIVMINGSSRRDLLLNSQNFC 362
Query: 61 RSIPAGAENPSLSRLCYRRLWGSRNRRALILGWAYYLDAFSSYPLRTWLPSVYRGHDNWY 120
RSIPAGAENPSLSRLCYRRLWGSRNRRALILGWAYYLDAFSSYPLRTWLPSVYRGHDNWY
Sbjct: 363 RSIPAGAENPSLSRLCYRRLWGSRNRRALILGWAYYLDAFSSYPLRTWLPSVYRGHDNWY 422
Query: 121 TRATALPLGTVGSLRPTFVPARRVGLAVKLPSAFALEGQSPSGPRKPLHASVTFWEAYAP 180
TRATALPLGTVGSLRPTFVPARRVGLAVKLPSAFALEGQSPSGPRKPLHASVTFWEAYAP
Sbjct: 423 TRATALPLGTVGSLRPTFVPARRVGLAVKLPSAFALEGQSPSGPRKPLHASVTFWEAYAP 482
BLAST of CmoCh01G015160 vs. ExPASy TrEMBL
Match:
A0A2Z7CD85 (Metallocarboxypeptidase inhibitor OS=Dorcoceras hygrometricum OX=472368 GN=F511_24659 PE=4 SV=1)
HSP 1 Score: 367.9 bits (943), Expect = 2.5e-98
Identity = 177/180 (98.33%), Postives = 178/180 (98.89%), Query Frame = 0
Query: 1 MKIDGECLIELIGSCRNKVQVYRSVRMPQLHTSLHFHLTPIVMINGSSRRDLLLNSQNFC 60
MKIDGECLIELI SCRNKVQVYRSVRMPQLHTSLHFHLTPIVMINGSSRRDLLLNSQNF
Sbjct: 1 MKIDGECLIELIRSCRNKVQVYRSVRMPQLHTSLHFHLTPIVMINGSSRRDLLLNSQNFY 60
Query: 61 RSIPAGAENPSLSRLCYRRLWGSRNRRALILGWAYYLDAFSSYPLRTWLPSVYRGHDNWY 120
RSIPAGAENPSLSRLCYR+LWGSRNRRALILGWAYYLDAFSSYPLRTWLPSVYRGHDNWY
Sbjct: 61 RSIPAGAENPSLSRLCYRKLWGSRNRRALILGWAYYLDAFSSYPLRTWLPSVYRGHDNWY 120
Query: 121 TRATALPLGTVGSLRPTFVPARRVGLAVKLPSAFALEGQSPSGPRKPLHASVTFWEAYAP 180
TRATALPLGTVGSLRPTFVPARRVGLAVKLPSAFALEGQSPSGPRKPLHASVTFWEAYAP
Sbjct: 121 TRATALPLGTVGSLRPTFVPARRVGLAVKLPSAFALEGQSPSGPRKPLHASVTFWEAYAP 180
BLAST of CmoCh01G015160 vs. ExPASy TrEMBL
Match:
W9SEP0 (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_000614 PE=4 SV=1)
HSP 1 Score: 342.4 bits (877), Expect = 1.1e-90
Identity = 167/182 (91.76%), Postives = 171/182 (93.96%), Query Frame = 0
Query: 1 MKIDGECLIELIGSCRNKVQVYR--SVRMPQLHTSLHFHLTPIVMINGSSRRDLLLNSQN 60
MKIDGECLIELIGSCRNKVQVYR VRMPQLHTSLHFHLTPIVMINGSSRRDLLLNSQN
Sbjct: 1 MKIDGECLIELIGSCRNKVQVYRCIPVRMPQLHTSLHFHLTPIVMINGSSRRDLLLNSQN 60
Query: 61 FCRSIPAGAENPSLSRLCYRRLWGSRNRRALILGWAYYLDAFSSYPLRTWLPSVYRGHDN 120
F S PAGAENPSLS LCYRRLWGSRN+RALILGWAY+LDAF+SYPL TWLPSVYRGHDN
Sbjct: 61 FYHSTPAGAENPSLSWLCYRRLWGSRNKRALILGWAYFLDAFNSYPLHTWLPSVYRGHDN 120
Query: 121 WYTRATALPLGTVGSLRPTFVPARRVGLAVKLPSAFALEGQSPSGPRKPLHASVTFWEAY 180
WYTRATALP GTVGSLR TFVPAR VGLA+KLPSAFALEGQSPSGPRKPLHASVTFWEAY
Sbjct: 121 WYTRATALPPGTVGSLRLTFVPARWVGLAIKLPSAFALEGQSPSGPRKPLHASVTFWEAY 180
BLAST of CmoCh01G015160 vs. ExPASy TrEMBL
Match:
A0A5N6PW49 (Ribosomal_L16 domain-containing protein OS=Mikania micrantha OX=192012 GN=E3N88_04276 PE=3 SV=1)
HSP 1 Score: 340.5 bits (872), Expect = 4.3e-90
Identity = 164/168 (97.62%), Postives = 165/168 (98.21%), Query Frame = 0
Query: 7 CLIELIGSCRNKVQVYRSVRMPQLHTSLHFHLTPIVMINGSSRRDLLLNSQNFCRSIPAG 66
C IELIGSCRNKVQVYRSVRMPQLHTSLHFHLTPIVMIN SSRRDLLLNSQNFCRSIPAG
Sbjct: 407 CPIELIGSCRNKVQVYRSVRMPQLHTSLHFHLTPIVMINDSSRRDLLLNSQNFCRSIPAG 466
Query: 67 AENPSLSRLCYRRLWGSRNRRALILGWAYYLDAFSSYPLRTWLPSVYRGHDNWYTRATAL 126
AENPSLSRLCYRRLWGSRNRRALILGWAYYLDAFSSYPLRTWLPSVYRGHDNWYTRATAL
Sbjct: 467 AENPSLSRLCYRRLWGSRNRRALILGWAYYLDAFSSYPLRTWLPSVYRGHDNWYTRATAL 526
Query: 127 PLGTVGSLRPTFVPARRVGLAVKLPSAFALEGQSPSGPRKPLHASVTF 175
PLGTVGSLRPTFVPARRVGLAVKLPSAFALEGQSPSGPRKPLHAS+ F
Sbjct: 527 PLGTVGSLRPTFVPARRVGLAVKLPSAFALEGQSPSGPRKPLHASLPF 574
BLAST of CmoCh01G015160 vs. NCBI nr
Match:
KAG8363222.1 (hypothetical protein BUALT_BualtPtG0005600 [Buddleja alternifolia])
HSP 1 Score: 372.1 bits (954), Expect = 2.7e-99
Identity = 178/180 (98.89%), Postives = 179/180 (99.44%), Query Frame = 0
Query: 1 MKIDGECLIELIGSCRNKVQVYRSVRMPQLHTSLHFHLTPIVMINGSSRRDLLLNSQNFC 60
MKIDGECLIELI SCRNKVQVYRSVRMPQLHTSLHFHLTPIVMINGSSRRDLLLNSQNFC
Sbjct: 1 MKIDGECLIELIRSCRNKVQVYRSVRMPQLHTSLHFHLTPIVMINGSSRRDLLLNSQNFC 60
Query: 61 RSIPAGAENPSLSRLCYRRLWGSRNRRALILGWAYYLDAFSSYPLRTWLPSVYRGHDNWY 120
RSIPAGAENPSLSRLCYR+LWGSRNRRALILGWAYYLDAFSSYPLRTWLPSVYRGHDNWY
Sbjct: 61 RSIPAGAENPSLSRLCYRKLWGSRNRRALILGWAYYLDAFSSYPLRTWLPSVYRGHDNWY 120
Query: 121 TRATALPLGTVGSLRPTFVPARRVGLAVKLPSAFALEGQSPSGPRKPLHASVTFWEAYAP 180
TRATALPLGTVGSLRPTFVPARRVGLAVKLPSAFALEGQSPSGPRKPLHASVTFWEAYAP
Sbjct: 121 TRATALPLGTVGSLRPTFVPARRVGLAVKLPSAFALEGQSPSGPRKPLHASVTFWEAYAP 180
BLAST of CmoCh01G015160 vs. NCBI nr
Match:
KAD4385168.1 (hypothetical protein E3N88_25336 [Mikania micrantha])
HSP 1 Score: 369.8 bits (948), Expect = 1.4e-98
Identity = 176/180 (97.78%), Postives = 178/180 (98.89%), Query Frame = 0
Query: 1 MKIDGECLIELIGSCRNKVQVYRSVRMPQLHTSLHFHLTPIVMINGSSRRDLLLNSQNFC 60
+ +DGEC IELIGSCRNKVQVYRSVRMPQLHTSLHFHLTPIVMINGSSRRDLLLNSQNFC
Sbjct: 303 LDVDGECPIELIGSCRNKVQVYRSVRMPQLHTSLHFHLTPIVMINGSSRRDLLLNSQNFC 362
Query: 61 RSIPAGAENPSLSRLCYRRLWGSRNRRALILGWAYYLDAFSSYPLRTWLPSVYRGHDNWY 120
RSIPAGAENPSLSRLCYRRLWGSRNRRALILGWAYYLDAFSSYPLRTWLPSVYRGHDNWY
Sbjct: 363 RSIPAGAENPSLSRLCYRRLWGSRNRRALILGWAYYLDAFSSYPLRTWLPSVYRGHDNWY 422
Query: 121 TRATALPLGTVGSLRPTFVPARRVGLAVKLPSAFALEGQSPSGPRKPLHASVTFWEAYAP 180
TRATALPLGTVGSLRPTFVPARRVGLAVKLPSAFALEGQSPSGPRKPLHASVTFWEAYAP
Sbjct: 423 TRATALPLGTVGSLRPTFVPARRVGLAVKLPSAFALEGQSPSGPRKPLHASVTFWEAYAP 482
BLAST of CmoCh01G015160 vs. NCBI nr
Match:
KZV45021.1 (Metallocarboxypeptidase inhibitor [Dorcoceras hygrometricum])
HSP 1 Score: 367.9 bits (943), Expect = 5.2e-98
Identity = 177/180 (98.33%), Postives = 178/180 (98.89%), Query Frame = 0
Query: 1 MKIDGECLIELIGSCRNKVQVYRSVRMPQLHTSLHFHLTPIVMINGSSRRDLLLNSQNFC 60
MKIDGECLIELI SCRNKVQVYRSVRMPQLHTSLHFHLTPIVMINGSSRRDLLLNSQNF
Sbjct: 1 MKIDGECLIELIRSCRNKVQVYRSVRMPQLHTSLHFHLTPIVMINGSSRRDLLLNSQNFY 60
Query: 61 RSIPAGAENPSLSRLCYRRLWGSRNRRALILGWAYYLDAFSSYPLRTWLPSVYRGHDNWY 120
RSIPAGAENPSLSRLCYR+LWGSRNRRALILGWAYYLDAFSSYPLRTWLPSVYRGHDNWY
Sbjct: 61 RSIPAGAENPSLSRLCYRKLWGSRNRRALILGWAYYLDAFSSYPLRTWLPSVYRGHDNWY 120
Query: 121 TRATALPLGTVGSLRPTFVPARRVGLAVKLPSAFALEGQSPSGPRKPLHASVTFWEAYAP 180
TRATALPLGTVGSLRPTFVPARRVGLAVKLPSAFALEGQSPSGPRKPLHASVTFWEAYAP
Sbjct: 121 TRATALPLGTVGSLRPTFVPARRVGLAVKLPSAFALEGQSPSGPRKPLHASVTFWEAYAP 180
BLAST of CmoCh01G015160 vs. NCBI nr
Match:
KAG8363223.1 (hypothetical protein BUALT_BualtPtG0005800 [Buddleja alternifolia])
HSP 1 Score: 348.6 bits (893), Expect = 3.2e-92
Identity = 166/167 (99.40%), Postives = 167/167 (100.00%), Query Frame = 0
Query: 14 SCRNKVQVYRSVRMPQLHTSLHFHLTPIVMINGSSRRDLLLNSQNFCRSIPAGAENPSLS 73
SCRNKVQVYRSVRMPQLHTSLHFHLTPIVMINGSSRRDLLLNSQNFCRSIPAGAENPSLS
Sbjct: 972 SCRNKVQVYRSVRMPQLHTSLHFHLTPIVMINGSSRRDLLLNSQNFCRSIPAGAENPSLS 1031
Query: 74 RLCYRRLWGSRNRRALILGWAYYLDAFSSYPLRTWLPSVYRGHDNWYTRATALPLGTVGS 133
RLCYR+LWGSRNRRALILGWAYYLDAFSSYPLRTWLPSVYRGHDNWYTRATALPLGTVGS
Sbjct: 1032 RLCYRKLWGSRNRRALILGWAYYLDAFSSYPLRTWLPSVYRGHDNWYTRATALPLGTVGS 1091
Query: 134 LRPTFVPARRVGLAVKLPSAFALEGQSPSGPRKPLHASVTFWEAYAP 181
LRPTFVPARRVGLAVKLPSAFALEGQSPSGPRKPLHASVTFWEAYAP
Sbjct: 1092 LRPTFVPARRVGLAVKLPSAFALEGQSPSGPRKPLHASVTFWEAYAP 1138
BLAST of CmoCh01G015160 vs. NCBI nr
Match:
EXC50692.1 (hypothetical protein L484_000614 [Morus notabilis])
HSP 1 Score: 342.4 bits (877), Expect = 2.3e-90
Identity = 167/182 (91.76%), Postives = 171/182 (93.96%), Query Frame = 0
Query: 1 MKIDGECLIELIGSCRNKVQVYR--SVRMPQLHTSLHFHLTPIVMINGSSRRDLLLNSQN 60
MKIDGECLIELIGSCRNKVQVYR VRMPQLHTSLHFHLTPIVMINGSSRRDLLLNSQN
Sbjct: 1 MKIDGECLIELIGSCRNKVQVYRCIPVRMPQLHTSLHFHLTPIVMINGSSRRDLLLNSQN 60
Query: 61 FCRSIPAGAENPSLSRLCYRRLWGSRNRRALILGWAYYLDAFSSYPLRTWLPSVYRGHDN 120
F S PAGAENPSLS LCYRRLWGSRN+RALILGWAY+LDAF+SYPL TWLPSVYRGHDN
Sbjct: 61 FYHSTPAGAENPSLSWLCYRRLWGSRNKRALILGWAYFLDAFNSYPLHTWLPSVYRGHDN 120
Query: 121 WYTRATALPLGTVGSLRPTFVPARRVGLAVKLPSAFALEGQSPSGPRKPLHASVTFWEAY 180
WYTRATALP GTVGSLR TFVPAR VGLA+KLPSAFALEGQSPSGPRKPLHASVTFWEAY
Sbjct: 121 WYTRATALPPGTVGSLRLTFVPARWVGLAIKLPSAFALEGQSPSGPRKPLHASVTFWEAY 180
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A2N9GA72 | 2.7e-100 | 99.44 | Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS23936 PE=4 SV=1 | [more] |
A0A5N6N798 | 6.6e-99 | 97.78 | DNA-directed RNA polymerase OS=Mikania micrantha OX=192012 GN=E3N88_25336 PE=3 S... | [more] |
A0A2Z7CD85 | 2.5e-98 | 98.33 | Metallocarboxypeptidase inhibitor OS=Dorcoceras hygrometricum OX=472368 GN=F511_... | [more] |
W9SEP0 | 1.1e-90 | 91.76 | Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_000614 PE=4 SV=1 | [more] |
A0A5N6PW49 | 4.3e-90 | 97.62 | Ribosomal_L16 domain-containing protein OS=Mikania micrantha OX=192012 GN=E3N88_... | [more] |
Match Name | E-value | Identity | Description | |
KAG8363222.1 | 2.7e-99 | 98.89 | hypothetical protein BUALT_BualtPtG0005600 [Buddleja alternifolia] | [more] |
KAD4385168.1 | 1.4e-98 | 97.78 | hypothetical protein E3N88_25336 [Mikania micrantha] | [more] |
KZV45021.1 | 5.2e-98 | 98.33 | Metallocarboxypeptidase inhibitor [Dorcoceras hygrometricum] | [more] |
KAG8363223.1 | 3.2e-92 | 99.40 | hypothetical protein BUALT_BualtPtG0005800 [Buddleja alternifolia] | [more] |
EXC50692.1 | 2.3e-90 | 91.76 | hypothetical protein L484_000614 [Morus notabilis] | [more] |
Match Name | E-value | Identity | Description | |