CmoCh01G014560 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh01G014560
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionEF hand calcium-binding family protein
LocationCmo_Chr01: 11354914 .. 11355387 (-)
RNA-Seq ExpressionCmoCh01G014560
SyntenyCmoCh01G014560
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTCAACAACCATCTCTCTCCGCCGAGACCGACAGCCTAAGCCACATCTTCAGCCTCATAGAAGCATTCCGAGCATTCGATGCCGACAACGACGGTTTGATCTCAGCAGCGGAGGTCGGGGGGATCATGGGCTCGCTCGGGTACAACCTGAGCGAGCAGGACGTGAACGTGATGATGGAGGAGGGCGACGTCGACCGAGATGGGCTGCTGAGCATGGGGGAGTTCTTGGAGATGAGTGCAAGGAGTGTGGAAGTTGGGGAGGTGGGGAGGTATTTGAAGGTTGCCTTTGAGGCTCTAAATGCTGATGGGGATGATCTTGTGAGTGGGGAAGAGCTTTATGAAGTGTTTGTGAATTTGGGATTGGATGTTTCATTGGAGGATTGCATGGCTATTGTGGCTTCTATGGATGGTGATGGAGATGGAGCTGTTTTTCTTGAGGATTTGAAACTTATTGTTAATTCTCTTGATTGA

mRNA sequence

ATGGCTCAACAACCATCTCTCTCCGCCGAGACCGACAGCCTAAGCCACATCTTCAGCCTCATAGAAGCATTCCGAGCATTCGATGCCGACAACGACGGTTTGATCTCAGCAGCGGAGGTCGGGGGGATCATGGGCTCGCTCGGGTACAACCTGAGCGAGCAGGACGTGAACGTGATGATGGAGGAGGGCGACGTCGACCGAGATGGGCTGCTGAGCATGGGGGAGTTCTTGGAGATGAGTGCAAGGAGTGTGGAAGTTGGGGAGGTGGGGAGGTATTTGAAGGTTGCCTTTGAGGCTCTAAATGCTGATGGGGATGATCTTGTGAGTGGGGAAGAGCTTTATGAAGTGTTTGTGAATTTGGGATTGGATGTTTCATTGGAGGATTGCATGGCTATTGTGGCTTCTATGGATGGTGATGGAGATGGAGCTGTTTTTCTTGAGGATTTGAAACTTATTGTTAATTCTCTTGATTGA

Coding sequence (CDS)

ATGGCTCAACAACCATCTCTCTCCGCCGAGACCGACAGCCTAAGCCACATCTTCAGCCTCATAGAAGCATTCCGAGCATTCGATGCCGACAACGACGGTTTGATCTCAGCAGCGGAGGTCGGGGGGATCATGGGCTCGCTCGGGTACAACCTGAGCGAGCAGGACGTGAACGTGATGATGGAGGAGGGCGACGTCGACCGAGATGGGCTGCTGAGCATGGGGGAGTTCTTGGAGATGAGTGCAAGGAGTGTGGAAGTTGGGGAGGTGGGGAGGTATTTGAAGGTTGCCTTTGAGGCTCTAAATGCTGATGGGGATGATCTTGTGAGTGGGGAAGAGCTTTATGAAGTGTTTGTGAATTTGGGATTGGATGTTTCATTGGAGGATTGCATGGCTATTGTGGCTTCTATGGATGGTGATGGAGATGGAGCTGTTTTTCTTGAGGATTTGAAACTTATTGTTAATTCTCTTGATTGA

Protein sequence

MAQQPSLSAETDSLSHIFSLIEAFRAFDADNDGLISAAEVGGIMGSLGYNLSEQDVNVMMEEGDVDRDGLLSMGEFLEMSARSVEVGEVGRYLKVAFEALNADGDDLVSGEELYEVFVNLGLDVSLEDCMAIVASMDGDGDGAVFLEDLKLIVNSLD
Homology
[Close]
BLAST of CmoCh01G014560 vs. ExPASy Swiss-Prot
Match: Q5Z676 (Probable calcium-binding protein CML29 OS=Oryza sativa subsp. japonica OX=39947 GN=CML29 PE=2 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 3.7e-26
Identity = 68/157 (43.31%), Postives = 102/157 (64.97%), Query Frame = 0 

Query: 3   QQPSLSAETDSLSHIFSLIEAFRAFDADNDGLISAAEVGGIMGSLGYNLSEQDVNVMMEE 62
           Q   LS + ++LS+I SL+EAF+AFD+DNDGL++A E+ G++ SLG +  E +V  M+  
Sbjct: 15  QAQQLSVDFEALSYISSLVEAFQAFDSDNDGLVTAPELRGLLASLGLDKPEHEVRDMLAR 74

Query: 63  GDVDRDGLLSMGEFLE-MSARSVEVGEVGRYLKVAFEALN--ADGDDLVSGEELYEVFVN 122
            D DRDG LS+ E L+ M+A  + +G +G  L+ A  AL   A  D ++  +EL  +   
Sbjct: 75  ADADRDGKLSVEELLDVMNAGQLGLGALGALLQSAVPALESAAGPDGVLGADELARLLSV 134

Query: 123 LGLDVSLEDCMAIVASMDGDGDGAVFLEDLKLIVNSL 157
           +G   S+EDCM I+A MDGDGDGA+ +E+ +L+   L
Sbjct: 135 MG-TASVEDCMEIIACMDGDGDGAISVEEFRLMAQLL 170

[Close]
BLAST of CmoCh01G014560 vs. ExPASy Swiss-Prot
Match: Q9FYK2 (Probable calcium-binding protein CML25 OS=Arabidopsis thaliana OX=3702 GN=CML25 PE=2 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 6.7e-20
Identity = 51/152 (33.55%), Postives = 87/152 (57.24%), Query Frame = 0 

Query: 2   AQQPSLSAETDSLSHIFSLIEAFRAFDADNDGLISAAEVGGIMGSLGYNLSEQDVNVMME 61
           A  P L       + I  L   F+ FD + DG IS+ E+G IM SLG+ + E+++   + 
Sbjct: 20  ADSPYLQKARSGKTEIRELEAVFKKFDVNGDGKISSKELGAIMTSLGHEVPEEELEKAIT 79

Query: 62  EGDVDRDGLLSMGEFLEMSARSVEVGEVGRYLKVAFEALNADGDDLVSGEELYEVFVNLG 121
           E D   DG ++  EF+E++ + ++  +V   LK AF   + DG+  +S EEL+EV  +LG
Sbjct: 80  EIDRKGDGYINFEEFVELNTKGMDQNDVLENLKDAFSVYDIDGNGSISAEELHEVLRSLG 139

Query: 122 LDVSLEDCMAIVASMDGDGDGAVFLEDLKLIV 154
            + S+ +C  ++  +D DGDG +  E+ K+++
Sbjct: 140 DECSIAECRKMIGGVDKDGDGTIDFEEFKIMM 171

[Close]
BLAST of CmoCh01G014560 vs. ExPASy Swiss-Prot
Match: Q9LE22 (Probable calcium-binding protein CML27 OS=Arabidopsis thaliana OX=3702 GN=CML27 PE=1 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 3.7e-18
Identity = 47/136 (34.56%), Postives = 81/136 (59.56%), Query Frame = 0 

Query: 20  LIEAFRAFDADNDGLISAAEVGGIMGSLGYNLSEQDVNVMMEEGDVDRDGLLSMGEFLEM 79
           L + F  FD++ DG IS  E+GG+  ++G + +E ++N ++EE D DRDG +++ EF  +
Sbjct: 24  LKKVFDQFDSNGDGKISVLELGGVFKAMGTSYTETELNRVLEEVDTDRDGYINLDEFSTL 83

Query: 80  SARSVEVGEVGRYLKVAFEALNADGDDLVSGEELYEVFVNLGLDVSLEDCMAIVASMDGD 139
              S    E+    + AF+  + D + L+S  EL++V   LG+  S+EDC  ++  +D D
Sbjct: 84  CRSSSSAAEI----RDAFDLYDQDKNGLISASELHQVLNRLGMSCSVEDCTRMIGPVDAD 143

Query: 140 GDGAVFLEDLKLIVNS 156
           GDG V  E+ + ++ S
Sbjct: 144 GDGNVNFEEFQKMMTS 155

[Close]
BLAST of CmoCh01G014560 vs. ExPASy Swiss-Prot
Match: P02595 (Calmodulin OS=Patinopecten sp. OX=6574 PE=1 SV=2)

HSP 1 Score: 90.1 bits (222), Expect = 2.4e-17
Identity = 50/134 (37.31%), Postives = 73/134 (54.48%), Query Frame = 0 

Query: 22  EAFRAFDADNDGLISAAEVGGIMGSLGYNLSEQDVNVMMEEGDVDRDGLLSMGEFLEMSA 81
           EAF  FD D DG I+  E+G +M SLG N +E ++  M+ E D D DG +   EFL M A
Sbjct: 15  EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMMA 74

Query: 82  RSVEVGEVGRYLKVAFEALNADGDDLVSGEELYEVFVNLGLDVSLEDCMAIVASMDGDGD 141
           R ++  +    ++ AF   + DGD  +S  EL  V  NLG  ++ E+   ++   D DGD
Sbjct: 75  RKMKDTDSEEEIREAFRVFDKDGDGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGD 134

Query: 142 GAVFLEDLKLIVNS 156
           G V  E+   ++ S
Sbjct: 135 GQVNYEEFVTMMTS 148

[Close]
BLAST of CmoCh01G014560 vs. ExPASy Swiss-Prot
Match: P62184 (Calmodulin OS=Renilla reniformis OX=6136 PE=1 SV=2)

HSP 1 Score: 89.7 bits (221), Expect = 3.1e-17
Identity = 50/134 (37.31%), Postives = 73/134 (54.48%), Query Frame = 0 

Query: 22  EAFRAFDADNDGLISAAEVGGIMGSLGYNLSEQDVNVMMEEGDVDRDGLLSMGEFLEMSA 81
           EAF  FD D DG I+  E+G +M SLG N +E ++  M+ E D D DG +   EFL M A
Sbjct: 15  EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMMA 74

Query: 82  RSVEVGEVGRYLKVAFEALNADGDDLVSGEELYEVFVNLGLDVSLEDCMAIVASMDGDGD 141
           R ++  +    ++ AF   + DGD  +S  EL  V  NLG  ++ E+   ++   D DGD
Sbjct: 75  RKMKDTDSEEEIREAFRVFDKDGDGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGD 134

Query: 142 GAVFLEDLKLIVNS 156
           G V  E+   ++ S
Sbjct: 135 GQVNYEEFVKMMTS 148

[Close]
BLAST of CmoCh01G014560 vs. ExPASy TrEMBL
Match: A0A6J1FSB7 (probable calcium-binding protein CML29 OS=Cucurbita moschata OX=3662 GN=LOC111446418 PE=4 SV=1)

HSP 1 Score: 301.2 bits (770), Expect = 2.5e-78
Identity = 157/157 (100.00%), Postives = 157/157 (100.00%), Query Frame = 0 

Query: 1   MAQQPSLSAETDSLSHIFSLIEAFRAFDADNDGLISAAEVGGIMGSLGYNLSEQDVNVMM 60
           MAQQPSLSAETDSLSHIFSLIEAFRAFDADNDGLISAAEVGGIMGSLGYNLSEQDVNVMM
Sbjct: 1   MAQQPSLSAETDSLSHIFSLIEAFRAFDADNDGLISAAEVGGIMGSLGYNLSEQDVNVMM 60

Query: 61  EEGDVDRDGLLSMGEFLEMSARSVEVGEVGRYLKVAFEALNADGDDLVSGEELYEVFVNL 120
           EEGDVDRDGLLSMGEFLEMSARSVEVGEVGRYLKVAFEALNADGDDLVSGEELYEVFVNL
Sbjct: 61  EEGDVDRDGLLSMGEFLEMSARSVEVGEVGRYLKVAFEALNADGDDLVSGEELYEVFVNL 120

Query: 121 GLDVSLEDCMAIVASMDGDGDGAVFLEDLKLIVNSLD 158
           GLDVSLEDCMAIVASMDGDGDGAVFLEDLKLIVNSLD
Sbjct: 121 GLDVSLEDCMAIVASMDGDGDGAVFLEDLKLIVNSLD 157

[Close]
BLAST of CmoCh01G014560 vs. ExPASy TrEMBL
Match: A0A6J1J135 (probable calcium-binding protein CML29 OS=Cucurbita maxima OX=3661 GN=LOC111480326 PE=4 SV=1)

HSP 1 Score: 297.0 bits (759), Expect = 4.7e-77
Identity = 155/157 (98.73%), Postives = 156/157 (99.36%), Query Frame = 0 

Query: 1   MAQQPSLSAETDSLSHIFSLIEAFRAFDADNDGLISAAEVGGIMGSLGYNLSEQDVNVMM 60
           MAQ+ SLSAETDSLSHIFSLIEAFRAFDADNDGLISAAEVGGIMGSLGYNLSEQDVNVMM
Sbjct: 1   MAQEASLSAETDSLSHIFSLIEAFRAFDADNDGLISAAEVGGIMGSLGYNLSEQDVNVMM 60

Query: 61  EEGDVDRDGLLSMGEFLEMSARSVEVGEVGRYLKVAFEALNADGDDLVSGEELYEVFVNL 120
           EEGDVDRDGLLSMGEFLEMSARSVEVGEVGRYLKVAFEALNADGDDLVSGEELYEVFVNL
Sbjct: 61  EEGDVDRDGLLSMGEFLEMSARSVEVGEVGRYLKVAFEALNADGDDLVSGEELYEVFVNL 120

Query: 121 GLDVSLEDCMAIVASMDGDGDGAVFLEDLKLIVNSLD 158
           GLDVSLEDCMAIVASMDGDGDGAVFLEDLKLIVNSLD
Sbjct: 121 GLDVSLEDCMAIVASMDGDGDGAVFLEDLKLIVNSLD 157

[Close]
BLAST of CmoCh01G014560 vs. ExPASy TrEMBL
Match: A0A6J1CMA3 (probable calcium-binding protein CML29 OS=Momordica charantia OX=3673 GN=LOC111012911 PE=4 SV=1)

HSP 1 Score: 258.1 bits (658), Expect = 2.4e-65
Identity = 134/157 (85.35%), Postives = 149/157 (94.90%), Query Frame = 0 

Query: 1   MAQQPSLSAETDSLSHIFSLIEAFRAFDADNDGLISAAEVGGIMGSLGYNLSEQDVNVMM 60
           MAQ  SLSAET+SLSH+FSLIEAFRAFDADNDGLI+A EVGGIMGSLGYNLSE+DVN+MM
Sbjct: 1   MAQAGSLSAETESLSHMFSLIEAFRAFDADNDGLITAPEVGGIMGSLGYNLSEEDVNLMM 60

Query: 61  EEGDVDRDGLLSMGEFLEMSARSVEVGEV-GRYLKVAFEALNADGDDLVSGEELYEVFVN 120
           EEGDVD+DGLLSMGEFLEM+ARSVEVGEV G YLK+A+EAL ADGDDLVSGEELY+VF+N
Sbjct: 61  EEGDVDKDGLLSMGEFLEMNARSVEVGEVMGSYLKIAYEALKADGDDLVSGEELYDVFLN 120

Query: 121 LGLDVSLEDCMAIVASMDGDGDGAVFLEDLKLIVNSL 157
           +GL+VS+EDC AIVASMDGD DGAVFLEDLKLIV+SL
Sbjct: 121 VGLEVSVEDCNAIVASMDGDEDGAVFLEDLKLIVDSL 157

[Close]
BLAST of CmoCh01G014560 vs. ExPASy TrEMBL
Match: A0A1S3B9P7 (probable calcium-binding protein CML29 OS=Cucumis melo OX=3656 GN=LOC103487564 PE=4 SV=1)

HSP 1 Score: 250.4 bits (638), Expect = 5.1e-63
Identity = 126/156 (80.77%), Postives = 144/156 (92.31%), Query Frame = 0 

Query: 1   MAQQPSLSAETDSLSHIFSLIEAFRAFDADNDGLISAAEVGGIMGSLGYNLSEQDVNVMM 60
           MAQ  SL  +T++LSHIF+LIEAFRAFDADNDGLIS+AEVGGI+GSLGYNLSE+DV +MM
Sbjct: 1   MAQAGSLLVDTEALSHIFNLIEAFRAFDADNDGLISSAEVGGIVGSLGYNLSEEDVKMMM 60

Query: 61  EEGDVDRDGLLSMGEFLEMSARSVEVGEVGRYLKVAFEALNADGDDLVSGEELYEVFVNL 120
           EEGD D+DGLLSMGEFLEM+A+++EVGE+G YLK+A EAL ADGDDLVSGEELY+VFVNL
Sbjct: 61  EEGDADKDGLLSMGEFLEMNAKNMEVGELGSYLKIALEALKADGDDLVSGEELYDVFVNL 120

Query: 121 GLDVSLEDCMAIVASMDGDGDGAVFLEDLKLIVNSL 157
           GLDVSLED MAIVAS+DGDGDGA+FL D KLIVNSL
Sbjct: 121 GLDVSLEDSMAIVASLDGDGDGAMFLHDFKLIVNSL 156

[Close]
BLAST of CmoCh01G014560 vs. ExPASy TrEMBL
Match: A0A5D3D6S0 (Putative calcium-binding protein CML29 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1493G00180 PE=4 SV=1)

HSP 1 Score: 250.4 bits (638), Expect = 5.1e-63
Identity = 126/156 (80.77%), Postives = 144/156 (92.31%), Query Frame = 0 

Query: 1   MAQQPSLSAETDSLSHIFSLIEAFRAFDADNDGLISAAEVGGIMGSLGYNLSEQDVNVMM 60
           MAQ  SL  +T++LSHIF+LIEAFRAFDADNDGLIS+AEVGGI+GSLGYNLSE+DV +MM
Sbjct: 1   MAQAGSLLVDTEALSHIFNLIEAFRAFDADNDGLISSAEVGGIVGSLGYNLSEEDVKMMM 60

Query: 61  EEGDVDRDGLLSMGEFLEMSARSVEVGEVGRYLKVAFEALNADGDDLVSGEELYEVFVNL 120
           EEGD D+DGLLSMGEFLEM+A+++EVGE+G YLK+A EAL ADGDDLVSGEELY+VFVNL
Sbjct: 61  EEGDADKDGLLSMGEFLEMNAKNMEVGELGSYLKIALEALKADGDDLVSGEELYDVFVNL 120

Query: 121 GLDVSLEDCMAIVASMDGDGDGAVFLEDLKLIVNSL 157
           GLDVSLED MAIVAS+DGDGDGA+FL D KLIVNSL
Sbjct: 121 GLDVSLEDSMAIVASLDGDGDGAMFLHDFKLIVNSL 156

[Close]
BLAST of CmoCh01G014560 vs. NCBI nr
Match: XP_022941005.1 (probable calcium-binding protein CML29 [Cucurbita moschata])

HSP 1 Score: 301.2 bits (770), Expect = 5.2e-78
Identity = 157/157 (100.00%), Postives = 157/157 (100.00%), Query Frame = 0 

Query: 1   MAQQPSLSAETDSLSHIFSLIEAFRAFDADNDGLISAAEVGGIMGSLGYNLSEQDVNVMM 60
           MAQQPSLSAETDSLSHIFSLIEAFRAFDADNDGLISAAEVGGIMGSLGYNLSEQDVNVMM
Sbjct: 1   MAQQPSLSAETDSLSHIFSLIEAFRAFDADNDGLISAAEVGGIMGSLGYNLSEQDVNVMM 60

Query: 61  EEGDVDRDGLLSMGEFLEMSARSVEVGEVGRYLKVAFEALNADGDDLVSGEELYEVFVNL 120
           EEGDVDRDGLLSMGEFLEMSARSVEVGEVGRYLKVAFEALNADGDDLVSGEELYEVFVNL
Sbjct: 61  EEGDVDRDGLLSMGEFLEMSARSVEVGEVGRYLKVAFEALNADGDDLVSGEELYEVFVNL 120

Query: 121 GLDVSLEDCMAIVASMDGDGDGAVFLEDLKLIVNSLD 158
           GLDVSLEDCMAIVASMDGDGDGAVFLEDLKLIVNSLD
Sbjct: 121 GLDVSLEDCMAIVASMDGDGDGAVFLEDLKLIVNSLD 157

[Close]
BLAST of CmoCh01G014560 vs. NCBI nr
Match: XP_022981068.1 (probable calcium-binding protein CML29 [Cucurbita maxima])

HSP 1 Score: 297.0 bits (759), Expect = 9.8e-77
Identity = 155/157 (98.73%), Postives = 156/157 (99.36%), Query Frame = 0 

Query: 1   MAQQPSLSAETDSLSHIFSLIEAFRAFDADNDGLISAAEVGGIMGSLGYNLSEQDVNVMM 60
           MAQ+ SLSAETDSLSHIFSLIEAFRAFDADNDGLISAAEVGGIMGSLGYNLSEQDVNVMM
Sbjct: 1   MAQEASLSAETDSLSHIFSLIEAFRAFDADNDGLISAAEVGGIMGSLGYNLSEQDVNVMM 60

Query: 61  EEGDVDRDGLLSMGEFLEMSARSVEVGEVGRYLKVAFEALNADGDDLVSGEELYEVFVNL 120
           EEGDVDRDGLLSMGEFLEMSARSVEVGEVGRYLKVAFEALNADGDDLVSGEELYEVFVNL
Sbjct: 61  EEGDVDRDGLLSMGEFLEMSARSVEVGEVGRYLKVAFEALNADGDDLVSGEELYEVFVNL 120

Query: 121 GLDVSLEDCMAIVASMDGDGDGAVFLEDLKLIVNSLD 158
           GLDVSLEDCMAIVASMDGDGDGAVFLEDLKLIVNSLD
Sbjct: 121 GLDVSLEDCMAIVASMDGDGDGAVFLEDLKLIVNSLD 157

[Close]
BLAST of CmoCh01G014560 vs. NCBI nr
Match: KAG6608067.1 (putative calcium-binding protein CML29, partial [Cucurbita argyrosperma subsp. sororia] >KAG7031697.1 putative calcium-binding protein CML29, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 295.8 bits (756), Expect = 2.2e-76
Identity = 153/157 (97.45%), Postives = 156/157 (99.36%), Query Frame = 0 

Query: 1   MAQQPSLSAETDSLSHIFSLIEAFRAFDADNDGLISAAEVGGIMGSLGYNLSEQDVNVMM 60
           MAQQPSLSA+TDSLSHIFSLIEAFRAFDADNDGLISAAEVGGIMGSLGYNLSEQDVN+MM
Sbjct: 1   MAQQPSLSAQTDSLSHIFSLIEAFRAFDADNDGLISAAEVGGIMGSLGYNLSEQDVNMMM 60

Query: 61  EEGDVDRDGLLSMGEFLEMSARSVEVGEVGRYLKVAFEALNADGDDLVSGEELYEVFVNL 120
           EEGDVD+DGLLSMGEFLEMS RSVEVGEVGRYLKVAFEALNADGDDLVSGEELYEVFVNL
Sbjct: 61  EEGDVDQDGLLSMGEFLEMSGRSVEVGEVGRYLKVAFEALNADGDDLVSGEELYEVFVNL 120

Query: 121 GLDVSLEDCMAIVASMDGDGDGAVFLEDLKLIVNSLD 158
           GLDVSLEDCMAIVASMDGDGDGAVFLEDLKLIVNSLD
Sbjct: 121 GLDVSLEDCMAIVASMDGDGDGAVFLEDLKLIVNSLD 157

[Close]
BLAST of CmoCh01G014560 vs. NCBI nr
Match: XP_023525266.1 (probable calcium-binding protein CML29 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 295.0 bits (754), Expect = 3.7e-76
Identity = 153/157 (97.45%), Postives = 155/157 (98.73%), Query Frame = 0 

Query: 1   MAQQPSLSAETDSLSHIFSLIEAFRAFDADNDGLISAAEVGGIMGSLGYNLSEQDVNVMM 60
           MAQQPSLSAETDSLSHIF+LIEAFRAFD DND LISAAEVGGIMGSLGYNLSEQDVN+MM
Sbjct: 1   MAQQPSLSAETDSLSHIFNLIEAFRAFDTDNDSLISAAEVGGIMGSLGYNLSEQDVNMMM 60

Query: 61  EEGDVDRDGLLSMGEFLEMSARSVEVGEVGRYLKVAFEALNADGDDLVSGEELYEVFVNL 120
           EEGDVDRDGLLSMGEFLEMSARSVEVGEVGRYLKVAFEALNADGDDLVSGEELYEVFVNL
Sbjct: 61  EEGDVDRDGLLSMGEFLEMSARSVEVGEVGRYLKVAFEALNADGDDLVSGEELYEVFVNL 120

Query: 121 GLDVSLEDCMAIVASMDGDGDGAVFLEDLKLIVNSLD 158
           GLDVSLEDCMAIVASMDGDGDGAVFLEDLKLIVNSLD
Sbjct: 121 GLDVSLEDCMAIVASMDGDGDGAVFLEDLKLIVNSLD 157

[Close]
BLAST of CmoCh01G014560 vs. NCBI nr
Match: XP_038897482.1 (probable calcium-binding protein CML29 [Benincasa hispida])

HSP 1 Score: 264.6 bits (675), Expect = 5.4e-67
Identity = 133/156 (85.26%), Postives = 150/156 (96.15%), Query Frame = 0 

Query: 1   MAQQPSLSAETDSLSHIFSLIEAFRAFDADNDGLISAAEVGGIMGSLGYNLSEQDVNVMM 60
           MAQ  SLSAET++LSHIF+LIEAFRAFDADNDGLIS+AEVGGIMGSLGY+++EQDVN+MM
Sbjct: 1   MAQAGSLSAETETLSHIFNLIEAFRAFDADNDGLISSAEVGGIMGSLGYDMNEQDVNMMM 60

Query: 61  EEGDVDRDGLLSMGEFLEMSARSVEVGEVGRYLKVAFEALNADGDDLVSGEELYEVFVNL 120
           EEGDVDRDGLLS+GEFLEM+A+++EVGE+G YLK+AFEAL ADGDDLVSGEELY+VFVNL
Sbjct: 61  EEGDVDRDGLLSIGEFLEMNAKNMEVGELGSYLKIAFEALKADGDDLVSGEELYDVFVNL 120

Query: 121 GLDVSLEDCMAIVASMDGDGDGAVFLEDLKLIVNSL 157
           GL+VSLEDCMAIVASMDGDGDGAVFL D KLIVNSL
Sbjct: 121 GLEVSLEDCMAIVASMDGDGDGAVFLHDFKLIVNSL 156

[Close]
BLAST of CmoCh01G014560 vs. TAIR 10
Match: AT1G24620.1 (EF hand calcium-binding protein family )

HSP 1 Score: 98.6 bits (244), Expect = 4.7e-21
Identity = 51/152 (33.55%), Postives = 87/152 (57.24%), Query Frame = 0 

Query: 2   AQQPSLSAETDSLSHIFSLIEAFRAFDADNDGLISAAEVGGIMGSLGYNLSEQDVNVMME 61
           A  P L       + I  L   F+ FD + DG IS+ E+G IM SLG+ + E+++   + 
Sbjct: 20  ADSPYLQKARSGKTEIRELEAVFKKFDVNGDGKISSKELGAIMTSLGHEVPEEELEKAIT 79

Query: 62  EGDVDRDGLLSMGEFLEMSARSVEVGEVGRYLKVAFEALNADGDDLVSGEELYEVFVNLG 121
           E D   DG ++  EF+E++ + ++  +V   LK AF   + DG+  +S EEL+EV  +LG
Sbjct: 80  EIDRKGDGYINFEEFVELNTKGMDQNDVLENLKDAFSVYDIDGNGSISAEELHEVLRSLG 139

Query: 122 LDVSLEDCMAIVASMDGDGDGAVFLEDLKLIV 154
            + S+ +C  ++  +D DGDG +  E+ K+++
Sbjct: 140 DECSIAECRKMIGGVDKDGDGTIDFEEFKIMM 171

[Close]
BLAST of CmoCh01G014560 vs. TAIR 10
Match: AT1G18210.1 (Calcium-binding EF-hand family protein )

HSP 1 Score: 92.8 bits (229), Expect = 2.6e-19
Identity = 47/136 (34.56%), Postives = 81/136 (59.56%), Query Frame = 0 

Query: 20  LIEAFRAFDADNDGLISAAEVGGIMGSLGYNLSEQDVNVMMEEGDVDRDGLLSMGEFLEM 79
           L + F  FD++ DG IS  E+GG+  ++G + +E ++N ++EE D DRDG +++ EF  +
Sbjct: 24  LKKVFDQFDSNGDGKISVLELGGVFKAMGTSYTETELNRVLEEVDTDRDGYINLDEFSTL 83

Query: 80  SARSVEVGEVGRYLKVAFEALNADGDDLVSGEELYEVFVNLGLDVSLEDCMAIVASMDGD 139
              S    E+    + AF+  + D + L+S  EL++V   LG+  S+EDC  ++  +D D
Sbjct: 84  CRSSSSAAEI----RDAFDLYDQDKNGLISASELHQVLNRLGMSCSVEDCTRMIGPVDAD 143

Query: 140 GDGAVFLEDLKLIVNS 156
           GDG V  E+ + ++ S
Sbjct: 144 GDGNVNFEEFQKMMTS 155

[Close]
BLAST of CmoCh01G014560 vs. TAIR 10
Match: AT1G18210.2 (Calcium-binding EF-hand family protein )

HSP 1 Score: 92.8 bits (229), Expect = 2.6e-19
Identity = 47/136 (34.56%), Postives = 81/136 (59.56%), Query Frame = 0 

Query: 20  LIEAFRAFDADNDGLISAAEVGGIMGSLGYNLSEQDVNVMMEEGDVDRDGLLSMGEFLEM 79
           L + F  FD++ DG IS  E+GG+  ++G + +E ++N ++EE D DRDG +++ EF  +
Sbjct: 24  LKKVFDQFDSNGDGKISVLELGGVFKAMGTSYTETELNRVLEEVDTDRDGYINLDEFSTL 83

Query: 80  SARSVEVGEVGRYLKVAFEALNADGDDLVSGEELYEVFVNLGLDVSLEDCMAIVASMDGD 139
              S    E+    + AF+  + D + L+S  EL++V   LG+  S+EDC  ++  +D D
Sbjct: 84  CRSSSSAAEI----RDAFDLYDQDKNGLISASELHQVLNRLGMSCSVEDCTRMIGPVDAD 143

Query: 140 GDGAVFLEDLKLIVNS 156
           GDG V  E+ + ++ S
Sbjct: 144 GDGNVNFEEFQKMMTS 155

[Close]
BLAST of CmoCh01G014560 vs. TAIR 10
Match: AT1G73630.1 (EF hand calcium-binding protein family )

HSP 1 Score: 86.7 bits (213), Expect = 1.9e-17
Identity = 44/136 (32.35%), Postives = 83/136 (61.03%), Query Frame = 0 

Query: 20  LIEAFRAFDADNDGLISAAEVGGIMGSLGYNLSEQDVNVMMEEGDVDRDGLLSMGEFLEM 79
           L + F  FDA+ DG IS +E+G +  S+G + +E+++N +++E D+D DG ++  EF  +
Sbjct: 21  LKKVFDKFDANGDGKISVSELGNVFKSMGTSYTEEELNRVLDEIDIDCDGFINQEEFATI 80

Query: 80  SARSVEVGEVGRYLKVAFEALNADGDDLVSGEELYEVFVNLGLDVSLEDCMAIVASMDGD 139
              S    E+    + AF+  + + + L+S  E+++V   LG+  S+EDC+ ++  +D D
Sbjct: 81  CRSSSSAVEI----REAFDLYDQNKNGLISSSEIHKVLNRLGMTCSVEDCVRMIGHVDTD 140

Query: 140 GDGAVFLEDLKLIVNS 156
           GDG V  E+ + +++S
Sbjct: 141 GDGNVNFEEFQKMMSS 152

[Close]
BLAST of CmoCh01G014560 vs. TAIR 10
Match: AT5G21274.1 (calmodulin 6 )

HSP 1 Score: 84.0 bits (206), Expect = 1.2e-16
Identity = 47/127 (37.01%), Postives = 69/127 (54.33%), Query Frame = 0 

Query: 22  EAFRAFDADNDGLISAAEVGGIMGSLGYNLSEQDVNVMMEEGDVDRDGLLSMGEFLEMSA 81
           EAF  FD D DG I+  E+G +M SLG N +E ++  M+ E D D +G +   EFL + A
Sbjct: 15  EAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMA 74

Query: 82  RSVEVGEVGRYLKVAFEALNADGDDLVSGEELYEVFVNLGLDVSLEDCMAIVASMDGDGD 141
           R ++  +    LK AF   + D +  +S  EL  V  NLG  +S E+   ++   D DGD
Sbjct: 75  RKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLSDEEVDEMIREADVDGD 134

Query: 142 GAVFLED 149
           G +  E+
Sbjct: 135 GQINYEE 141

The following BLAST results are available for this feature:
BLAST of CmoCh01G014560 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q5Z6763.7e-2643.31Probable calcium-binding protein CML29 OS=Oryza sativa subsp. japonica OX=39947 ... [more]
Q9FYK26.7e-2033.55Probable calcium-binding protein CML25 OS=Arabidopsis thaliana OX=3702 GN=CML25 ... [more]
Q9LE223.7e-1834.56Probable calcium-binding protein CML27 OS=Arabidopsis thaliana OX=3702 GN=CML27 ... [more]
P025952.4e-1737.31Calmodulin OS=Patinopecten sp. OX=6574 PE=1 SV=2[more]
P621843.1e-1737.31Calmodulin OS=Renilla reniformis OX=6136 PE=1 SV=2[more]
BLAST of CmoCh01G014560 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1FSB72.5e-78100.00probable calcium-binding protein CML29 OS=Cucurbita moschata OX=3662 GN=LOC11144... [more]
A0A6J1J1354.7e-7798.73probable calcium-binding protein CML29 OS=Cucurbita maxima OX=3661 GN=LOC1114803... [more]
A0A6J1CMA32.4e-6585.35probable calcium-binding protein CML29 OS=Momordica charantia OX=3673 GN=LOC1110... [more]
A0A1S3B9P75.1e-6380.77probable calcium-binding protein CML29 OS=Cucumis melo OX=3656 GN=LOC103487564 P... [more]
A0A5D3D6S05.1e-6380.77Putative calcium-binding protein CML29 OS=Cucumis melo var. makuwa OX=1194695 GN... [more]
BLAST of CmoCh01G014560 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022941005.15.2e-78100.00probable calcium-binding protein CML29 [Cucurbita moschata][more]
XP_022981068.19.8e-7798.73probable calcium-binding protein CML29 [Cucurbita maxima][more]
KAG6608067.12.2e-7697.45putative calcium-binding protein CML29, partial [Cucurbita argyrosperma subsp. s... [more]
XP_023525266.13.7e-7697.45probable calcium-binding protein CML29 [Cucurbita pepo subsp. pepo][more]
XP_038897482.15.4e-6785.26probable calcium-binding protein CML29 [Benincasa hispida][more]
BLAST of CmoCh01G014560 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G24620.14.7e-2133.55EF hand calcium-binding protein family [more]
AT1G18210.12.6e-1934.56Calcium-binding EF-hand family protein [more]
AT1G18210.22.6e-1934.56Calcium-binding EF-hand family protein [more]
AT1G73630.11.9e-1732.35EF hand calcium-binding protein family [more]
AT5G21274.11.2e-1637.01calmodulin 6 [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002048EF-hand domainSMARTSM00054efh_1coord: 128..156
e-value: 32.0
score: 5.6
coord: 55..83
e-value: 0.33
score: 20.0
coord: 19..47
e-value: 0.0025
score: 27.0
coord: 92..120
e-value: 14.0
score: 8.6
IPR002048EF-hand domainPFAMPF13499EF-hand_7coord: 20..79
e-value: 9.1E-10
score: 38.9
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 88..123
score: 9.101698
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 15..50
score: 12.755995
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 124..157
score: 9.352757
IPR002048EF-hand domainCDDcd00051EFhcoord: 20..79
e-value: 2.54895E-15
score: 64.4913
NoneNo IPR availableGENE3D1.10.238.10coord: 1..84
e-value: 6.6E-19
score: 69.8
NoneNo IPR availableGENE3D1.10.238.10coord: 85..155
e-value: 6.1E-9
score: 38.0
NoneNo IPR availablePANTHERPTHR23050:SF245CALMODULIN-RELATEDcoord: 22..149
coord: 19..79
NoneNo IPR availablePANTHERPTHR23050CALCIUM BINDING PROTEINcoord: 22..149
coord: 19..79
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 28..40
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 64..76
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 15..153

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh01G014560.1CmoCh01G014560.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005509 calcium ion binding