CmoCh01G014550 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh01G014550
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
Descriptionprotein MEI2-like 6
LocationCmo_Chr01: 11352770 .. 11353880 (+)
RNA-Seq ExpressionCmoCh01G014550
SyntenyCmoCh01G014550
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTCTCCGCCGTCTCAGTTCTCTGAACCCCAACGCCGACCCTTTCCCTTCCACCACGCCATCTCGTCCCCCGCCGCCGCCTCACCTCCGCCACGCCCTTCTATCTCTCCCACCCCTTCATGGATATCAATCCTACATCCACCCATACCAACCCCCCCATCATCCCATCTTCGCTTTCTACCACCTCGTTCCGCCACTTCCTTTTCCCGGCGGTGGCGGCGGGGTTTCTCTCTCTCACTTGGAAAATCCCGTCGGCAACGGCGACGTCAAATCTCACCACAAAAAATCCAAGATTAAGAAATGGGTTCCATCTGCCCCCGATCTCATGCCCTTGGAAACCACCACCGTCATGATCAAGAACATCCCCAATCAATTGAGGTGAAATTTCTCATTATTTTATTACAAAACTTTATGAAGTTGACCCTTTTTTTATGAACAGGCGACATAATCTCTTGCAAATTTTGGACGAACATTGCAAGTGCAAGAATTCATATTCTAATCAAAACAGCTTCCGGTCGGAGTACGACTTCGTTTACTTGCCAATGGATTTCGGGTCAGCTCAATTTCAAAGAAAGTTCAAATTTTTGGAACAACCCATTATGTCATTTTGCATGAAAACACTAAAATTTCAAATTCTTGGAACAACCCATTATGGGATTTTGCATGAATTACTAAAATTTCAAAATTTTCAGGAAATTTTGGTTCGATGGAAAGGTTTCAAATTTGGGGTATGCATTTGTGAATTTCACGAGTTCTAAAGGAGCTTCGGAGTTTTGTAAAGCGTATCACCGCCGTCAATGGGAGGTTTCGGTGAACAGAAAAGTGTGTGAAATTAAACGTGCTAAAATTCAGGTCAATTTCAGCCATTGTTTTTGGTTGGTTGGTTAGTTGTTTGTTTAGATGTTGATGTAAAGAATGGTGTTTTGTGGGTTTAGGGTTTGGAGGCTCTCATGGAGGCTTTTAGGAACAAGGTGTTTTGGTGCCATGCTAATAACTATCTTCCGGTTCTGTTGGAGCCGCCGAGTGATGGTTGCCGGAGGTATCGAGTCACGGCGGTCGGTAAGCGGATTGGGCGGCCGCCGCCTAGCCCGATTAAGAAAGGTGGCTAA

mRNA sequence

ATGGCTCTCCGCCGTCTCAGTTCTCTGAACCCCAACGCCGACCCTTTCCCTTCCACCACGCCATCTCGTCCCCCGCCGCCGCCTCACCTCCGCCACGCCCTTCTATCTCTCCCACCCCTTCATGGATATCAATCCTACATCCACCCATACCAACCCCCCCATCATCCCATCTTCGCTTTCTACCACCTCGTTCCGCCACTTCCTTTTCCCGGCGGTGGCGGCGGGGTTTCTCTCTCTCACTTGGAAAATCCCGTCGGCAACGGCGACGTCAAATCTCACCACAAAAAATCCAAGATTAAGAAATGGGTTCCATCTGCCCCCGATCTCATGCCCTTGGAAACCACCACCGTCATGATCAAGAACATCCCCAATCAATTGAGGCGACATAATCTCTTGCAAATTTTGGACGAACATTGCAAGTGCAAGAATTCATATTCTAATCAAAACAGCTTCCGGTCGGAGTACGACTTCGTTTACTTGCCAATGGATTTCGGGAAATTTTGGTTCGATGGAAAGGTTTCAAATTTGGGGTATGCATTTGTGAATTTCACGAGTTCTAAAGGAGCTTCGGAGTTTTGTAAAGCGTATCACCGCCGTCAATGGGAGGTTTCGGTGAACAGAAAAGTGTGTGAAATTAAACGTGCTAAAATTCAGGGTTTGGAGGCTCTCATGGAGGCTTTTAGGAACAAGGTGTTTTGGTGCCATGCTAATAACTATCTTCCGGTTCTGTTGGAGCCGCCGAGTGATGGTTGCCGGAGGTATCGAGTCACGGCGGTCGGTAAGCGGATTGGGCGGCCGCCGCCTAGCCCGATTAAGAAAGGTGGCTAA

Coding sequence (CDS)

ATGGCTCTCCGCCGTCTCAGTTCTCTGAACCCCAACGCCGACCCTTTCCCTTCCACCACGCCATCTCGTCCCCCGCCGCCGCCTCACCTCCGCCACGCCCTTCTATCTCTCCCACCCCTTCATGGATATCAATCCTACATCCACCCATACCAACCCCCCCATCATCCCATCTTCGCTTTCTACCACCTCGTTCCGCCACTTCCTTTTCCCGGCGGTGGCGGCGGGGTTTCTCTCTCTCACTTGGAAAATCCCGTCGGCAACGGCGACGTCAAATCTCACCACAAAAAATCCAAGATTAAGAAATGGGTTCCATCTGCCCCCGATCTCATGCCCTTGGAAACCACCACCGTCATGATCAAGAACATCCCCAATCAATTGAGGCGACATAATCTCTTGCAAATTTTGGACGAACATTGCAAGTGCAAGAATTCATATTCTAATCAAAACAGCTTCCGGTCGGAGTACGACTTCGTTTACTTGCCAATGGATTTCGGGAAATTTTGGTTCGATGGAAAGGTTTCAAATTTGGGGTATGCATTTGTGAATTTCACGAGTTCTAAAGGAGCTTCGGAGTTTTGTAAAGCGTATCACCGCCGTCAATGGGAGGTTTCGGTGAACAGAAAAGTGTGTGAAATTAAACGTGCTAAAATTCAGGGTTTGGAGGCTCTCATGGAGGCTTTTAGGAACAAGGTGTTTTGGTGCCATGCTAATAACTATCTTCCGGTTCTGTTGGAGCCGCCGAGTGATGGTTGCCGGAGGTATCGAGTCACGGCGGTCGGTAAGCGGATTGGGCGGCCGCCGCCTAGCCCGATTAAGAAAGGTGGCTAA

Protein sequence

MALRRLSSLNPNADPFPSTTPSRPPPPPHLRHALLSLPPLHGYQSYIHPYQPPHHPIFAFYHLVPPLPFPGGGGGVSLSHLENPVGNGDVKSHHKKSKIKKWVPSAPDLMPLETTTVMIKNIPNQLRRHNLLQILDEHCKCKNSYSNQNSFRSEYDFVYLPMDFGKFWFDGKVSNLGYAFVNFTSSKGASEFCKAYHRRQWEVSVNRKVCEIKRAKIQGLEALMEAFRNKVFWCHANNYLPVLLEPPSDGCRRYRVTAVGKRIGRPPPSPIKKGG
Homology
BLAST of CmoCh01G014550 vs. ExPASy Swiss-Prot
Match: A2WY46 (Protein terminal ear1 homolog OS=Oryza sativa subsp. indica OX=39946 GN=PLA2 PE=2 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 1.5e-27
Identity = 63/141 (44.68%), Postives = 87/141 (61.70%), Query Frame = 0

Query: 115 TTVMIKNIPNQLRRHNLLQILDEHCKCKN-----SYSNQNSFRSEYDFVYLPMDFGKFWF 174
           TTVMI+NIPN+  +  LL +LD HC   N     S  ++    S YDF+YLP+DF     
Sbjct: 455 TTVMIRNIPNKYSQKLLLNMLDNHCILSNQQIEASCEDEAQPFSSYDFLYLPIDF----- 514

Query: 175 DGKVSNLGYAFVNFTSSKGASEFCKAYHRRQWEVSVNRKVCEIKRAKIQGLEALMEAFRN 234
                N+GY FVN TS + A    KA+H++ WEV  +RK+C++  A++QGL+AL E F+N
Sbjct: 515 -NNKCNVGYGFVNLTSPEAAVRLYKAFHKQPWEVFNSRKICQVTYARVQGLDALKEHFKN 574

Query: 235 KVFWCHANNYLPVLLEPPSDG 251
             F C ++ YLPV+  PP DG
Sbjct: 575 SKFPCDSDEYLPVVFSPPRDG 589

BLAST of CmoCh01G014550 vs. ExPASy Swiss-Prot
Match: Q0JGS5 (Protein terminal ear1 homolog OS=Oryza sativa subsp. japonica OX=39947 GN=PLA2 PE=2 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 1.5e-27
Identity = 63/141 (44.68%), Postives = 87/141 (61.70%), Query Frame = 0

Query: 115 TTVMIKNIPNQLRRHNLLQILDEHCKCKN-----SYSNQNSFRSEYDFVYLPMDFGKFWF 174
           TTVMI+NIPN+  +  LL +LD HC   N     S  ++    S YDF+YLP+DF     
Sbjct: 458 TTVMIRNIPNKYSQKLLLNMLDNHCILSNQQIEASCEDEAQPFSSYDFLYLPIDF----- 517

Query: 175 DGKVSNLGYAFVNFTSSKGASEFCKAYHRRQWEVSVNRKVCEIKRAKIQGLEALMEAFRN 234
                N+GY FVN TS + A    KA+H++ WEV  +RK+C++  A++QGL+AL E F+N
Sbjct: 518 -NNKCNVGYGFVNLTSPEAAVRLYKAFHKQPWEVFNSRKICQVTYARVQGLDALKEHFKN 577

Query: 235 KVFWCHANNYLPVLLEPPSDG 251
             F C ++ YLPV+  PP DG
Sbjct: 578 SKFPCDSDEYLPVVFSPPRDG 592

BLAST of CmoCh01G014550 vs. ExPASy Swiss-Prot
Match: O65001 (Protein terminal ear1 OS=Zea mays OX=4577 GN=TE1 PE=2 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 5.8e-27
Identity = 63/139 (45.32%), Postives = 84/139 (60.43%), Query Frame = 0

Query: 115 TTVMIKNIPNQLRRHNLLQILDEHCKCKNSY---SNQNSFRSEYDFVYLPMDFGKFWFDG 174
           TTVMI+NIPN+  +  LL +LD HC   N +   S +    S YDFVYLP+DF       
Sbjct: 441 TTVMIRNIPNKYSQKLLLNMLDNHCIQSNEWIVASGEEQPFSAYDFVYLPIDF------N 500

Query: 175 KVSNLGYAFVNFTSSKGASEFCKAYHRRQWEVSVNRKVCEIKRAKIQGLEALMEAFRNKV 234
              N+GY FVN TS +      KA+H++ WEV  +RK+C++  A++QGLEAL E F+N  
Sbjct: 501 NKCNVGYGFVNLTSPEARVRLYKAFHKQPWEVYNSRKICQVTYARVQGLEALKEHFKNSK 560

Query: 235 FWCHANNYLPVLLEPPSDG 251
           F C ++ YLPV   P  DG
Sbjct: 561 FPCDSDEYLPVAFSPARDG 573

BLAST of CmoCh01G014550 vs. ExPASy Swiss-Prot
Match: Q652K6 (Protein MEI2-like 6 OS=Oryza sativa subsp. japonica OX=39947 GN=ML6 PE=2 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 3.0e-23
Identity = 61/160 (38.12%), Postives = 91/160 (56.88%), Query Frame = 0

Query: 114 TTTVMIKNIPNQLRRHNLLQILDEHC-----KC--KNSYSNQNSFRSEYDFVYLPMDFGK 173
           TT++MI+NIPN+  +  L+ ILD+HC     KC  +     ++  +SEYDF Y+P+DF K
Sbjct: 169 TTSLMIRNIPNKFLKARLMAILDQHCADENGKCHRRGGGGGRSVVKSEYDFFYVPIDF-K 228

Query: 174 FWFDGKVSNLGYAFVNFTSSKGASEFCKAYHRRQWEVSVNRKVCEIKRAKIQGLEALMEA 233
             F     N GYAFVN T++  A          +W+ +++ KVC++  A IQGL+A +  
Sbjct: 229 TGF-----NKGYAFVNMTTATAARRLRAFLQDHRWDAAMSGKVCDVVPAAIQGLDAFVAH 288

Query: 234 FRNKVFWCHANNYLPVLLEPPSDGCRRYRVTAVGKRIGRP 267
           F    F C    +LPV  EPP DG ++ +   VG+ + RP
Sbjct: 289 FSASCFPCRTKEFLPVWFEPPRDGEQQTKAHVVGRLVVRP 322

BLAST of CmoCh01G014550 vs. ExPASy Swiss-Prot
Match: Q6ET49 (Protein MEI2-like 7 OS=Oryza sativa subsp. japonica OX=39947 GN=OML7 PE=2 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 5.1e-23
Identity = 66/168 (39.29%), Postives = 98/168 (58.33%), Query Frame = 0

Query: 115 TTVMIKNIPNQLRRHNLLQILDEHCKCKNSYSNQNSF-RSEYDFVYLPMDFGKFWFDGKV 174
           TTVM++NIPN+L R +++++LD+HC  +N    +    R+EYD VY+ MDFG      + 
Sbjct: 216 TTVMVRNIPNKLTRSDMVRLLDDHCARENRRRGRGGEPRAEYDLVYVRMDFG-MCNKERS 275

Query: 175 SNLGYAFVNFTSSKGASEFCKAYHRRQWEVSV--NRKVCEIKRAKIQGLEALMEAF-RNK 234
           SN+GYAFVNFT+++ A    +A H  +W+ S   + K+ +I+ A+IQG +AL+  F R  
Sbjct: 276 SNMGYAFVNFTTAEAARGLQRALHGCRWKRSAFDSGKIIDIRAARIQGKDALVRHFGRTT 335

Query: 235 VFWCHANNYLPVLLEPPSDGCRR-------YRVTAVGKRIGRPPPSPI 272
            + C  + YLP +  PP DG            V  VG R+   PP PI
Sbjct: 336 YYECDTDEYLPAVFSPPRDGSTAGAGAPSPPAVKTVGIRV---PPRPI 379

BLAST of CmoCh01G014550 vs. ExPASy TrEMBL
Match: A0A6J1FQ49 (protein MEI2-like 6 OS=Cucurbita moschata OX=3662 GN=LOC111446243 PE=4 SV=1)

HSP 1 Score: 578.6 bits (1490), Expect = 1.4e-161
Identity = 275/275 (100.00%), Postives = 275/275 (100.00%), Query Frame = 0

Query: 1   MALRRLSSLNPNADPFPSTTPSRPPPPPHLRHALLSLPPLHGYQSYIHPYQPPHHPIFAF 60
           MALRRLSSLNPNADPFPSTTPSRPPPPPHLRHALLSLPPLHGYQSYIHPYQPPHHPIFAF
Sbjct: 1   MALRRLSSLNPNADPFPSTTPSRPPPPPHLRHALLSLPPLHGYQSYIHPYQPPHHPIFAF 60

Query: 61  YHLVPPLPFPGGGGGVSLSHLENPVGNGDVKSHHKKSKIKKWVPSAPDLMPLETTTVMIK 120
           YHLVPPLPFPGGGGGVSLSHLENPVGNGDVKSHHKKSKIKKWVPSAPDLMPLETTTVMIK
Sbjct: 61  YHLVPPLPFPGGGGGVSLSHLENPVGNGDVKSHHKKSKIKKWVPSAPDLMPLETTTVMIK 120

Query: 121 NIPNQLRRHNLLQILDEHCKCKNSYSNQNSFRSEYDFVYLPMDFGKFWFDGKVSNLGYAF 180
           NIPNQLRRHNLLQILDEHCKCKNSYSNQNSFRSEYDFVYLPMDFGKFWFDGKVSNLGYAF
Sbjct: 121 NIPNQLRRHNLLQILDEHCKCKNSYSNQNSFRSEYDFVYLPMDFGKFWFDGKVSNLGYAF 180

Query: 181 VNFTSSKGASEFCKAYHRRQWEVSVNRKVCEIKRAKIQGLEALMEAFRNKVFWCHANNYL 240
           VNFTSSKGASEFCKAYHRRQWEVSVNRKVCEIKRAKIQGLEALMEAFRNKVFWCHANNYL
Sbjct: 181 VNFTSSKGASEFCKAYHRRQWEVSVNRKVCEIKRAKIQGLEALMEAFRNKVFWCHANNYL 240

Query: 241 PVLLEPPSDGCRRYRVTAVGKRIGRPPPSPIKKGG 276
           PVLLEPPSDGCRRYRVTAVGKRIGRPPPSPIKKGG
Sbjct: 241 PVLLEPPSDGCRRYRVTAVGKRIGRPPPSPIKKGG 275

BLAST of CmoCh01G014550 vs. ExPASy TrEMBL
Match: A0A5A7U920 (Protein terminal ear1-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1493G00270 PE=4 SV=1)

HSP 1 Score: 266.5 bits (680), Expect = 1.2e-67
Identity = 155/298 (52.01%), Postives = 195/298 (65.44%), Query Frame = 0

Query: 8   SLNPNADPFPSTTPSRPPPPP----HLRHALLSLPPLHGYQSYIHPY--QPPHHPIFA-- 67
           SLNPNADPF  TTP   PP       +   +L+  PLH   +Y+ PY     HH +F+  
Sbjct: 4   SLNPNADPFLYTTPFSSPPTKLQCNPITRLILAPVPLHA--NYVFPYLHGQHHHHMFSGL 63

Query: 68  FYHLVPPL---------PFPGGGGGVSLSH-----LENPVGNGDVKSHHKKSKIKKWVPS 127
           FY +VP            F GGGG VS S      ++  +     K H   + +     +
Sbjct: 64  FYGIVPQQVALSPPRSDGFCGGGGPVSYSQPQRFKVDRQMKCVPTKLHFDVADVNN--NN 123

Query: 128 APDLMP--LETTTVMIKNIPNQLRRHNLLQILDEHCKCKN------SYSNQNSFRSEYDF 187
           +  ++P   +TTT+MIKNIPNQ R+++LL ILD+HCK KN        S  +  RSEYDF
Sbjct: 124 SDQVLPSQTQTTTLMIKNIPNQFRQNHLLNILDKHCKWKNLGYEKKKNSLDSRRRSEYDF 183

Query: 188 VYLPMDFGKFWFDGKVSNLGYAFVNFTSSKGASEFCKAYHRRQWEVSVNRKVCEIKRAKI 247
           VYLPMDF K+W+DGK+SNLGYAFVNFT+   ASEFC+A+H RQW+V VN+KVCEIK AK+
Sbjct: 184 VYLPMDFRKYWYDGKISNLGYAFVNFTNPTAASEFCEAFHLRQWDVEVNKKVCEIKIAKL 243

Query: 248 QGLEALMEAFRNKVFWCHANNYLPVLLEPPSDGCRRYRVTAVGKRIGRPPPSPIKKGG 276
           QGL+AL +AF++K+FWCHAN+YLPV+LEP SDG RRYR   VGKRIGRPPPS IKK G
Sbjct: 244 QGLKALKDAFKDKIFWCHANSYLPVMLEPSSDGYRRYRAIPVGKRIGRPPPSSIKKCG 297

BLAST of CmoCh01G014550 vs. ExPASy TrEMBL
Match: A0A0A0KYM0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G374120 PE=4 SV=1)

HSP 1 Score: 257.3 bits (656), Expect = 7.3e-65
Identity = 153/302 (50.66%), Postives = 196/302 (64.90%), Query Frame = 0

Query: 8   SLNPNADPFPSTTPSRPPPP----PHLRHALLSLPPLHGYQSYIHPY-QPPHHPIFA--F 67
           SLNPNADPF  T P   PP       +   +L   PLH   +Y+ PY    HHP+F+  F
Sbjct: 4   SLNPNADPFFYTAPFSSPPMKLQCSPIPRLILGPVPLHA--NYLVPYLHQHHHPMFSGFF 63

Query: 68  YHLVPP---LPFP-------GGGGGVSLSHLENPVGNGDVKSHHKKSKIKKWVP------ 127
             +VPP   L  P       GGGGG S+S+ +     GD K         KWVP      
Sbjct: 64  NGIVPPQVALCSPRSDGFCGGGGGGGSISYSQPQRCEGDRK--------MKWVPTKLHFD 123

Query: 128 ------SAPDLMPL--ETTTVMIKNIPNQLRRHNLLQILDEHCKCKN-SYSNQNSF---- 187
                 ++  ++P   +TTT+MIKNIPNQ R+++LL ILD+HCK KN SY  ++S     
Sbjct: 124 VADDNNNSDQVLPFRTQTTTLMIKNIPNQFRQNHLLNILDKHCKWKNASYEKKHSLDSCR 183

Query: 188 RSEYDFVYLPMDFGKFWFDGKVSNLGYAFVNFTSSKGASEFCKAYHRRQWEVSVNRKVCE 247
           RSEYDFVYLPMDF K+W+DG++SNLGYAFVNFT+   ASEF +A+HRR+W+V+V++KVCE
Sbjct: 184 RSEYDFVYLPMDFRKYWYDGQISNLGYAFVNFTNPTAASEFREAFHRRRWDVAVSKKVCE 243

Query: 248 IKRAKIQGLEALMEAFRNKVFWCHANNYLPVLLEPPSDGCRRYRVTAVGKRIGRPPPSPI 274
           IK AK+QGL+AL  A ++K+FWCHA++YLPV+LEP SDG RRYR   VGKR+ RPPP   
Sbjct: 244 IKIAKLQGLKALNNALKDKIFWCHADSYLPVMLEPSSDGYRRYRAMPVGKRMDRPPPGSK 295

BLAST of CmoCh01G014550 vs. ExPASy TrEMBL
Match: A0A6J1CJE0 (protein terminal ear1 OS=Momordica charantia OX=3673 GN=LOC111011966 PE=4 SV=1)

HSP 1 Score: 219.5 bits (558), Expect = 1.7e-53
Identity = 135/291 (46.39%), Postives = 169/291 (58.08%), Query Frame = 0

Query: 9   LNPNADPFPSTTPSRPPPPPHLRHALLS-----LPPLHGYQSYI--HPYQPPHHPIFAFY 68
           LNPNADPF S  P  PPPPPH+  +L+S       P  G   Y+  HPY     P   +Y
Sbjct: 38  LNPNADPFLS--PPTPPPPPHVGGSLVSAYGNIYYPRAGAGFYLQFHPY-----PAVNYY 97

Query: 69  HLV------PPLPFPGGGGGVSLSHLENPVGNGDVKSHHKKSKIK---KWVP-------- 128
             +      PP    G GG            N  + S  +   IK   +WV         
Sbjct: 98  DPLSSQLFWPPYQAAGFGGAAVQDPKHGFQKNFMISSGPRPGDIKPSPQWVEKNGGGGGG 157

Query: 129 SAPDLMPLETTTVMIKNIPNQLRRHNLLQILDEHCKCKNSY--SNQNSFRSEYDFVYLPM 188
               +     TTVMIKNIPNQL+R +LLQ+LD +C+  N    S  +   +EYDFVYLPM
Sbjct: 158 GGDPVDGSGVTTVMIKNIPNQLKRRDLLQLLDRYCQVVNQKRDSKPDFSAAEYDFVYLPM 217

Query: 189 DFGKFWFDGKVSNLGYAFVNFTSSKGASEFCKAYHRRQWEVSVNRKVCEIKRAKIQGLEA 248
           DF + WF+GKVSNLGYAFVNFT+S  AS+FC  YH  +W+V+VN+K+CE+  A+IQG EA
Sbjct: 218 DFRRSWFEGKVSNLGYAFVNFTTSIAASQFCTVYHNYKWDVNVNKKICEVTDARIQGKEA 277

Query: 249 LMEAFRNKVFWCHANNYLPVLLEPPSDGCRRYRVTAVGKRIGRPPPSPIKK 274
           L  AF+NK+FWC  + YLPV+L P S+G RRYR   VGKRI R P  P+KK
Sbjct: 278 LTNAFKNKIFWCCTDQYLPVMLTPASNGFRRYRRVNVGKRIPRVPRKPLKK 321

BLAST of CmoCh01G014550 vs. ExPASy TrEMBL
Match: A0A6J1FEC5 (meiosis protein mei2-like OS=Cucurbita moschata OX=3662 GN=LOC111444947 PE=4 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 9.2e-52
Identity = 132/299 (44.15%), Postives = 176/299 (58.86%), Query Frame = 0

Query: 9   LNPNADPFPSTTPS-RPPPPPHLRHALLSLPPLHGYQSYIHP-------YQPPHHPIFAF 68
           LNPNADPF S  P+  PPP PH          + GY +  +P       +Q    P  + 
Sbjct: 45  LNPNADPFLSAPPTFLPPPSPHF---------VSGYGNLYYPRATSAYAWQFHSFPAVSC 104

Query: 69  YHLVPPLPFPG-----GGGGVSLSHLENPVGNGDVKSHHKKSKIK---KWVP-------- 128
           Y+  P + +P      G GG +++  ++ +G   V S      IK   +WV         
Sbjct: 105 YNAWPQVVWPSYQPAVGFGGCAVA--DSKLGREFVVSSGPSRDIKCPPEWVQKKISSDED 164

Query: 129 -SAPDLMPLE-------TTTVMIKNIPNQLRRHNLLQILDEHCKCKNSY--SNQNSFRSE 188
            +A    P+E        TT+MIKNIPNQ +R +LLQ+LD +C+  N    S  + + SE
Sbjct: 165 NNADVDDPVEKTVPCSGITTLMIKNIPNQFKRRDLLQLLDRYCQVMNQRRDSRPDFYVSE 224

Query: 189 YDFVYLPMDFGKFWFDGKVSNLGYAFVNFTSSKGASEFCKAYHRRQWEVSVNRKVCEIKR 248
           YDFVYLPMDF + W++GKVSNLGYAFVNFT+S  AS+FC  YH  +W+V+VN+K+CEI  
Sbjct: 225 YDFVYLPMDFMRSWYEGKVSNLGYAFVNFTTSMAASQFCAVYHNYKWDVNVNKKICEITE 284

Query: 249 AKIQGLEALMEAFRNKVFWCHANNYLPVLLEPPSDGCRRYRVTAVGKRIGRPPPSPIKK 274
           A+IQG EAL  AF+NK+FWC  + YLPV+L P S+G RRYR   VG+RI R P  P+KK
Sbjct: 285 ARIQGKEALKNAFKNKIFWCSNDQYLPVMLSPASNGRRRYRRVNVGRRIARLPRKPLKK 332

BLAST of CmoCh01G014550 vs. NCBI nr
Match: XP_022940738.1 (protein MEI2-like 6 [Cucurbita moschata])

HSP 1 Score: 578.6 bits (1490), Expect = 2.9e-161
Identity = 275/275 (100.00%), Postives = 275/275 (100.00%), Query Frame = 0

Query: 1   MALRRLSSLNPNADPFPSTTPSRPPPPPHLRHALLSLPPLHGYQSYIHPYQPPHHPIFAF 60
           MALRRLSSLNPNADPFPSTTPSRPPPPPHLRHALLSLPPLHGYQSYIHPYQPPHHPIFAF
Sbjct: 1   MALRRLSSLNPNADPFPSTTPSRPPPPPHLRHALLSLPPLHGYQSYIHPYQPPHHPIFAF 60

Query: 61  YHLVPPLPFPGGGGGVSLSHLENPVGNGDVKSHHKKSKIKKWVPSAPDLMPLETTTVMIK 120
           YHLVPPLPFPGGGGGVSLSHLENPVGNGDVKSHHKKSKIKKWVPSAPDLMPLETTTVMIK
Sbjct: 61  YHLVPPLPFPGGGGGVSLSHLENPVGNGDVKSHHKKSKIKKWVPSAPDLMPLETTTVMIK 120

Query: 121 NIPNQLRRHNLLQILDEHCKCKNSYSNQNSFRSEYDFVYLPMDFGKFWFDGKVSNLGYAF 180
           NIPNQLRRHNLLQILDEHCKCKNSYSNQNSFRSEYDFVYLPMDFGKFWFDGKVSNLGYAF
Sbjct: 121 NIPNQLRRHNLLQILDEHCKCKNSYSNQNSFRSEYDFVYLPMDFGKFWFDGKVSNLGYAF 180

Query: 181 VNFTSSKGASEFCKAYHRRQWEVSVNRKVCEIKRAKIQGLEALMEAFRNKVFWCHANNYL 240
           VNFTSSKGASEFCKAYHRRQWEVSVNRKVCEIKRAKIQGLEALMEAFRNKVFWCHANNYL
Sbjct: 181 VNFTSSKGASEFCKAYHRRQWEVSVNRKVCEIKRAKIQGLEALMEAFRNKVFWCHANNYL 240

Query: 241 PVLLEPPSDGCRRYRVTAVGKRIGRPPPSPIKKGG 276
           PVLLEPPSDGCRRYRVTAVGKRIGRPPPSPIKKGG
Sbjct: 241 PVLLEPPSDGCRRYRVTAVGKRIGRPPPSPIKKGG 275

BLAST of CmoCh01G014550 vs. NCBI nr
Match: KAG7031696.1 (Protein terminal ear1-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 570.5 bits (1469), Expect = 8.0e-159
Identity = 270/275 (98.18%), Postives = 273/275 (99.27%), Query Frame = 0

Query: 1   MALRRLSSLNPNADPFPSTTPSRPPPPPHLRHALLSLPPLHGYQSYIHPYQPPHHPIFAF 60
           MALRRLS+LNPNADPFP+TTPS PPPPPHLRHALLSLPPLHGYQSYIHPYQPPHHPIFAF
Sbjct: 1   MALRRLSALNPNADPFPTTTPSLPPPPPHLRHALLSLPPLHGYQSYIHPYQPPHHPIFAF 60

Query: 61  YHLVPPLPFPGGGGGVSLSHLENPVGNGDVKSHHKKSKIKKWVPSAPDLMPLETTTVMIK 120
           YHLVPPLPFPGGGGGVSLSHLENPVGNGDVKSHHKKSKIKKWVPSAPDLMPLETTTVMIK
Sbjct: 61  YHLVPPLPFPGGGGGVSLSHLENPVGNGDVKSHHKKSKIKKWVPSAPDLMPLETTTVMIK 120

Query: 121 NIPNQLRRHNLLQILDEHCKCKNSYSNQNSFRSEYDFVYLPMDFGKFWFDGKVSNLGYAF 180
           NIPNQLRRHNLLQILDEHCKCKNSYSNQNSFRSEYDFVYLPMDFGKFWFDGKVSNLGYAF
Sbjct: 121 NIPNQLRRHNLLQILDEHCKCKNSYSNQNSFRSEYDFVYLPMDFGKFWFDGKVSNLGYAF 180

Query: 181 VNFTSSKGASEFCKAYHRRQWEVSVNRKVCEIKRAKIQGLEALMEAFRNKVFWCHANNYL 240
           VNFTSSKGASEFCKAYHRRQWEVSVNRKVCEIKRAKIQGLEALMEAFRNKVFWCHANNYL
Sbjct: 181 VNFTSSKGASEFCKAYHRRQWEVSVNRKVCEIKRAKIQGLEALMEAFRNKVFWCHANNYL 240

Query: 241 PVLLEPPSDGCRRYRVTAVGKRIGRPPPSPIKKGG 276
           PV+LEPPSDGCRRYRVT VGKRIGRPPPSPIKKGG
Sbjct: 241 PVVLEPPSDGCRRYRVTPVGKRIGRPPPSPIKKGG 275

BLAST of CmoCh01G014550 vs. NCBI nr
Match: KAG6608066.1 (Protein terminal ear1-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 570.1 bits (1468), Expect = 1.0e-158
Identity = 270/275 (98.18%), Postives = 273/275 (99.27%), Query Frame = 0

Query: 1   MALRRLSSLNPNADPFPSTTPSRPPPPPHLRHALLSLPPLHGYQSYIHPYQPPHHPIFAF 60
           MALRRLS+LNPNADPFP+TTPS PPPPPHLRHALLSLPPLHGYQSYIHPYQPPHHPIFAF
Sbjct: 1   MALRRLSALNPNADPFPTTTPSIPPPPPHLRHALLSLPPLHGYQSYIHPYQPPHHPIFAF 60

Query: 61  YHLVPPLPFPGGGGGVSLSHLENPVGNGDVKSHHKKSKIKKWVPSAPDLMPLETTTVMIK 120
           YHLVPPLPFPGGGGGVSLSHLENPVGNGDVKSHHKKSKIKKWVPSAPDLMPLETTTVMIK
Sbjct: 61  YHLVPPLPFPGGGGGVSLSHLENPVGNGDVKSHHKKSKIKKWVPSAPDLMPLETTTVMIK 120

Query: 121 NIPNQLRRHNLLQILDEHCKCKNSYSNQNSFRSEYDFVYLPMDFGKFWFDGKVSNLGYAF 180
           NIPNQLRRHNLLQILDEHCKCKNSYSNQNSFRSEYDFVYLPMDFGKFWFDGKVSNLGYAF
Sbjct: 121 NIPNQLRRHNLLQILDEHCKCKNSYSNQNSFRSEYDFVYLPMDFGKFWFDGKVSNLGYAF 180

Query: 181 VNFTSSKGASEFCKAYHRRQWEVSVNRKVCEIKRAKIQGLEALMEAFRNKVFWCHANNYL 240
           VNFTSSKGASEFCKAYHRRQWEVSVNRKVCEIKRAKIQGLEALMEAFRNKVFWCHANNYL
Sbjct: 181 VNFTSSKGASEFCKAYHRRQWEVSVNRKVCEIKRAKIQGLEALMEAFRNKVFWCHANNYL 240

Query: 241 PVLLEPPSDGCRRYRVTAVGKRIGRPPPSPIKKGG 276
           PV+LEPPSDGCRRYRVT VGKRIGRPPPSPIKKGG
Sbjct: 241 PVVLEPPSDGCRRYRVTPVGKRIGRPPPSPIKKGG 275

BLAST of CmoCh01G014550 vs. NCBI nr
Match: XP_038896615.1 (protein terminal ear1 homolog [Benincasa hispida])

HSP 1 Score: 289.3 bits (739), Expect = 3.6e-74
Identity = 170/310 (54.84%), Postives = 201/310 (64.84%), Query Frame = 0

Query: 8   SLNPNADPFPSTTPSRPPPPPHL------RHALLSLPPLHGY---QSYIHPYQPPHHPIF 67
           SLNPNADPF  TTP   PP  H          L+  PPLH Y     Y+H Y   +    
Sbjct: 4   SLNPNADPFLYTTPFVSPPKLHFIPIYKTPPKLILAPPLHAYVEVDPYLHHYS-MYSDSE 63

Query: 68  AFYHLVPPLP--------FPGGGGGVSLSHLENPVGNGDVKSHHKKS-----KIKKWVPS 127
            FY +VP +P        F GGGGGV +SH +   G G V  ++K       K+K+WVP 
Sbjct: 64  LFYDVVPQVPSSWPCSDGFCGGGGGV-VSHSQ---GEGYVAKNNKGERKYYCKVKEWVPQ 123

Query: 128 AP-------------DLMPLETTTVMIKNIPNQLRRHNLLQILDEHCKCKNSYSNQNS-- 187
                           L+P +TTT+MIKNIPNQLRR++L+ ILDEHCK KN+   +N+  
Sbjct: 124 LHFRVPPESDNDTNFQLLPFQTTTLMIKNIPNQLRRNDLMNILDEHCKLKNASFEKNNDN 183

Query: 188 -----FRSEYDFVYLPMDFGKFWFDGKVSNLGYAFVNFTSSKGASEFCKAYHRRQWEVSV 247
                 RSEYDFVYLPMDF       K+SNLGYAFVNFT+   ASEF KA+HRRQW V+V
Sbjct: 184 RLDGRRRSEYDFVYLPMDF------RKISNLGYAFVNFTNPTAASEFYKAFHRRQWNVAV 243

Query: 248 NRKVCEIKRAKIQGLEALMEAFRNKVFWCHANNYLPVLLEPPSDGCRRYRVTAVGKRIGR 276
           N+KVCEIKRAK+QGL+ALM+AFRNK+FWCHANNYLPV+LEPPSDG RRYR T VGKRI +
Sbjct: 244 NKKVCEIKRAKLQGLKALMDAFRNKIFWCHANNYLPVMLEPPSDGYRRYRATPVGKRISQ 302

BLAST of CmoCh01G014550 vs. NCBI nr
Match: KAA0052403.1 (protein terminal ear1-like protein [Cucumis melo var. makuwa] >TYK19229.1 protein terminal ear1-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 266.5 bits (680), Expect = 2.5e-67
Identity = 155/298 (52.01%), Postives = 195/298 (65.44%), Query Frame = 0

Query: 8   SLNPNADPFPSTTPSRPPPPP----HLRHALLSLPPLHGYQSYIHPY--QPPHHPIFA-- 67
           SLNPNADPF  TTP   PP       +   +L+  PLH   +Y+ PY     HH +F+  
Sbjct: 4   SLNPNADPFLYTTPFSSPPTKLQCNPITRLILAPVPLHA--NYVFPYLHGQHHHHMFSGL 63

Query: 68  FYHLVPPL---------PFPGGGGGVSLSH-----LENPVGNGDVKSHHKKSKIKKWVPS 127
           FY +VP            F GGGG VS S      ++  +     K H   + +     +
Sbjct: 64  FYGIVPQQVALSPPRSDGFCGGGGPVSYSQPQRFKVDRQMKCVPTKLHFDVADVNN--NN 123

Query: 128 APDLMP--LETTTVMIKNIPNQLRRHNLLQILDEHCKCKN------SYSNQNSFRSEYDF 187
           +  ++P   +TTT+MIKNIPNQ R+++LL ILD+HCK KN        S  +  RSEYDF
Sbjct: 124 SDQVLPSQTQTTTLMIKNIPNQFRQNHLLNILDKHCKWKNLGYEKKKNSLDSRRRSEYDF 183

Query: 188 VYLPMDFGKFWFDGKVSNLGYAFVNFTSSKGASEFCKAYHRRQWEVSVNRKVCEIKRAKI 247
           VYLPMDF K+W+DGK+SNLGYAFVNFT+   ASEFC+A+H RQW+V VN+KVCEIK AK+
Sbjct: 184 VYLPMDFRKYWYDGKISNLGYAFVNFTNPTAASEFCEAFHLRQWDVEVNKKVCEIKIAKL 243

Query: 248 QGLEALMEAFRNKVFWCHANNYLPVLLEPPSDGCRRYRVTAVGKRIGRPPPSPIKKGG 276
           QGL+AL +AF++K+FWCHAN+YLPV+LEP SDG RRYR   VGKRIGRPPPS IKK G
Sbjct: 244 QGLKALKDAFKDKIFWCHANSYLPVMLEPSSDGYRRYRAIPVGKRIGRPPPSSIKKCG 297

BLAST of CmoCh01G014550 vs. TAIR 10
Match: AT1G37140.1 (MEI2 C-terminal RRM only like 1 )

HSP 1 Score: 144.4 bits (363), Expect = 1.3e-34
Identity = 75/151 (49.67%), Postives = 96/151 (63.58%), Query Frame = 0

Query: 115 TTVMIKNIPNQLRRHNLLQILDEHCKCKNSYSNQNSFRSEYDFVYLPMDFGKFWFDGKVS 174
           T+VM+KNIPN L R +LL+ILD HC+  N        +S YDF+YLPMDF      GK +
Sbjct: 84  TSVMVKNIPNCLGRMDLLRILDNHCRKHNE-------KSSYDFLYLPMDF------GKRA 143

Query: 175 NLGYAFVNFTSSKGASEFCKAYHRRQWE-VSVNRKVCEIKRAKIQGLEALMEAFRNKVFW 234
           NLGYAFVNFTSS  A  F + +    W+ +   +K+CEI  AK QG E L   FRN  F 
Sbjct: 144 NLGYAFVNFTSSLAAERFRREFENFSWDNIGFRKKICEITVAKYQGKEELTRHFRNSRFT 203

Query: 235 CHANNYLPVLLEPPSDGCRRYRVTAVGKRIG 265
           CH ++YLPV+L PPS+G   Y +T +G R+G
Sbjct: 204 CHTDDYLPVVLSPPSNGFTAYTLTKLGYRVG 221

BLAST of CmoCh01G014550 vs. TAIR 10
Match: AT3G26120.1 (terminal EAR1-like 1 )

HSP 1 Score: 124.0 bits (310), Expect = 1.8e-28
Identity = 65/144 (45.14%), Postives = 87/144 (60.42%), Query Frame = 0

Query: 115 TTVMIKNIPNQLRRHNLLQILDEHC--------KCKNSYSNQNSFRSEYDFVYLPMDFGK 174
           TT+MIKNIPN+  +  LL +LD+HC        +  N + + +   S YDFVYLPMDF  
Sbjct: 408 TTLMIKNIPNKYSQKLLLDMLDKHCIHINEAITEEHNKHESHHQPYSSYDFVYLPMDF-- 467

Query: 175 FWFDGKVSNLGYAFVNFTSSKGASEFCKAYHRRQWEVSVNRKVCEIKRAKIQGLEALMEA 234
                   N+GY FVN TS + A  F KA+H ++WEV  + K+C+I  A++QGLE L E 
Sbjct: 468 ----NNKCNVGYGFVNMTSPEAAWRFYKAFHGQRWEVFNSHKICQITYARVQGLEDLKEH 527

Query: 235 FRNKVFWCHANNYLPVLLEPPSDG 251
           F++  F C A  YLPV+  PP DG
Sbjct: 528 FKSSKFPCEAELYLPVVFSPPRDG 545

BLAST of CmoCh01G014550 vs. TAIR 10
Match: AT1G67770.1 (terminal EAR1-like 2 )

HSP 1 Score: 114.0 bits (284), Expect = 1.9e-25
Identity = 62/141 (43.97%), Postives = 86/141 (60.99%), Query Frame = 0

Query: 115 TTVMIKNIPNQLRRHNLLQILDEHCK-CKNSYSNQNSF--RSEYDFVYLPMDFGKFWFDG 174
           TTVMIKNIPN+  +  LL++LD HCK C  S   + +    S YDFVYLP+DF       
Sbjct: 337 TTVMIKNIPNKYTQKLLLKMLDTHCKDCNQSVIKEGNKTPMSSYDFVYLPIDF------S 396

Query: 175 KVSNLGYAFVNFTSSKGASEFCKAYHRRQW-EVSVNRKVCEIKRAKIQGLEALMEAFRN- 234
             SN+GY FVN TS +      K++H + W + +  RK+CE+  A+IQGLE+L E F+N 
Sbjct: 397 NKSNVGYGFVNMTSPEAVWRLYKSFHNQHWRDFTTTRKICEVTYARIQGLESLREHFKNV 456

Query: 235 KVFWCHANNYLPVLLEPPSDG 251
           ++     + Y+PV+  PP DG
Sbjct: 457 RLAGVEIDEYMPVVFSPPRDG 471

BLAST of CmoCh01G014550 vs. TAIR 10
Match: AT1G37140.2 (MEI2 C-terminal RRM only like 1 )

HSP 1 Score: 99.8 bits (247), Expect = 3.7e-21
Identity = 47/95 (49.47%), Postives = 61/95 (64.21%), Query Frame = 0

Query: 171 GKVSNLGYAFVNFTSSKGASEFCKAYHRRQWE-VSVNRKVCEIKRAKIQGLEALMEAFRN 230
           GK +NLGYAFVNFTSS  A  F + +    W+ +   +K+CEI  AK QG E L   FRN
Sbjct: 96  GKRANLGYAFVNFTSSLAAERFRREFENFSWDNIGFRKKICEITVAKYQGKEELTRHFRN 155

Query: 231 KVFWCHANNYLPVLLEPPSDGCRRYRVTAVGKRIG 265
             F CH ++YLPV+L PPS+G   Y +T +G R+G
Sbjct: 156 SRFTCHTDDYLPVVLSPPSNGFTAYTLTKLGYRVG 190

BLAST of CmoCh01G014550 vs. TAIR 10
Match: AT5G07930.1 (MEI2 C-terminal RRM only like 2 )

HSP 1 Score: 87.8 bits (216), Expect = 1.5e-17
Identity = 62/168 (36.90%), Postives = 88/168 (52.38%), Query Frame = 0

Query: 96  KSKIKKWVPSAPDLMPLETTTVMIKNIPNQLRRHNLLQILDEHCKCKNSYSNQNSFR-SE 155
           ++ IK  V S  D      TTVM++NIPN+  R  ++Q +D+HC+  N       F  S 
Sbjct: 120 RTSIKPEVESNGD----HITTVMLRNIPNRYTREMMIQFMDKHCEEANKSGKNEEFTISA 179

Query: 156 YDFVYLPMDFGKFWFDGKVSNLGYAFVNFTSSKGASEFCKAYHRRQWEVSVNRKVCEIKR 215
           YDF+YLP+DF          N GYAFVNFT++K  S+F  A + + W    ++K  EI  
Sbjct: 180 YDFIYLPIDF------RTTMNKGYAFVNFTNAKAVSKFKAACNNKPWCHFYSKKELEITY 239

Query: 216 AKIQGLEALMEAFRNKVFWCHANNYLPVLLEPP-SDGCRRYRVTAVGK 262
           A+IQ  E L++ F++  +   A  Y  V   P  S G    + T VGK
Sbjct: 240 ARIQANE-LVKRFQHMTYPEEA--YSAVCFSPARSGGKDTVQTTMVGK 274

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A2WY461.5e-2744.68Protein terminal ear1 homolog OS=Oryza sativa subsp. indica OX=39946 GN=PLA2 PE=... [more]
Q0JGS51.5e-2744.68Protein terminal ear1 homolog OS=Oryza sativa subsp. japonica OX=39947 GN=PLA2 P... [more]
O650015.8e-2745.32Protein terminal ear1 OS=Zea mays OX=4577 GN=TE1 PE=2 SV=1[more]
Q652K63.0e-2338.13Protein MEI2-like 6 OS=Oryza sativa subsp. japonica OX=39947 GN=ML6 PE=2 SV=1[more]
Q6ET495.1e-2339.29Protein MEI2-like 7 OS=Oryza sativa subsp. japonica OX=39947 GN=OML7 PE=2 SV=1[more]
Match NameE-valueIdentityDescription
A0A6J1FQ491.4e-161100.00protein MEI2-like 6 OS=Cucurbita moschata OX=3662 GN=LOC111446243 PE=4 SV=1[more]
A0A5A7U9201.2e-6752.01Protein terminal ear1-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E56... [more]
A0A0A0KYM07.3e-6550.66Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G374120 PE=4 SV=1[more]
A0A6J1CJE01.7e-5346.39protein terminal ear1 OS=Momordica charantia OX=3673 GN=LOC111011966 PE=4 SV=1[more]
A0A6J1FEC59.2e-5244.15meiosis protein mei2-like OS=Cucurbita moschata OX=3662 GN=LOC111444947 PE=4 SV=... [more]
Match NameE-valueIdentityDescription
XP_022940738.12.9e-161100.00protein MEI2-like 6 [Cucurbita moschata][more]
KAG7031696.18.0e-15998.18Protein terminal ear1-like protein, partial [Cucurbita argyrosperma subsp. argyr... [more]
KAG6608066.11.0e-15898.18Protein terminal ear1-like protein, partial [Cucurbita argyrosperma subsp. soror... [more]
XP_038896615.13.6e-7454.84protein terminal ear1 homolog [Benincasa hispida][more]
KAA0052403.12.5e-6752.01protein terminal ear1-like protein [Cucumis melo var. makuwa] >TYK19229.1 protei... [more]
Match NameE-valueIdentityDescription
AT1G37140.11.3e-3449.67MEI2 C-terminal RRM only like 1 [more]
AT3G26120.11.8e-2845.14terminal EAR1-like 1 [more]
AT1G67770.11.9e-2543.97terminal EAR1-like 2 [more]
AT1G37140.23.7e-2149.47MEI2 C-terminal RRM only like 1 [more]
AT5G07930.11.5e-1736.90MEI2 C-terminal RRM only like 2 [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 210..230
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..29
NoneNo IPR availablePANTHERPTHR24012:SF803MEI2 C-TERMINAL RRM ONLY LIKE 1coord: 89..259
NoneNo IPR availablePANTHERPTHR24012RNA BINDING PROTEINcoord: 89..259
IPR007201Mei2-like, C-terminal RNA recognition motifPFAMPF04059RRM_2coord: 115..228
e-value: 1.1E-18
score: 67.2
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 90..219
e-value: 1.8E-5
score: 26.3
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 115..201

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh01G014550.1CmoCh01G014550.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding