CmoCh01G014290 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh01G014290
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
Descriptionprotein HAPLESS 2 isoform X1
LocationCmo_Chr01: 11182778 .. 11185350 (+)
RNA-Seq ExpressionCmoCh01G014290
SyntenyCmoCh01G014290
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TCCAGATCTTTCAACGCGCTGTGGCCGACGGTTATCTTTCAAGAAACCGGCGGTGTGGAAATGAGTCACCCGCCACTCTTCTTCCATATGCGATTCTTCACTTCCCCTTGCTGTTTAAACATTCTTATCGATGTAATACTTTCTGGAGTGTTTGCATTTTTAAATTTTCATGGCGTGTATGATTGATTCTACGAGTTCGATTTACCAAACAAGCTTCTCTGATTGTTCTGGAGTGCAAATCTTATCTGCGAGTGAAAATACCAATGATCGATGATCGATGATCGATTGTTCTAGTTATGATTATTATTGTGTTCAATTTTTCCCGTTTAGGTCTTGATGTTTCACGTTTTCATCTTATTTCGCAGGAGTGTTTTGTTTTGTTTTGTTAGTGAATGCTGAATCTATCCGACGCAATGGGTAATGTAGCCAGTTCATTGGCCTCTGGTTTGTTTTTGGCTCTTAACAAAGTATTTGGATCTCCACTTGATTTTCTCTCTGGAAAATCCTGCAGGTTGGTACCATTTTTCTTTTGCTTTTTCTCATCATGTGGCTTCTGCTCATAAACCTAATAATTTACCTGATTTTGTAATGTTCTATGCGCTTTTTGATTGAGTGCTGTTTACCGGATTTTGTCTTATTTTGTGCCTTTTGATTGAGTATTGTTTACCTGATTTTGTCACTGGGCGCACATGTTGGCAGTTCAGTGTGTGGATCAACATGGGATTTCATATGCTACATAGAAAATTTCTGCGTTGCCAATTTGCTAAAGATGGGCATGGTCGTGATCCTTGCATACTTTGGTGAGTGAAACAAGAAACTCCATGTCTTTGAGAATTTTGGTACTTCTAATATGTAGGGATTTCTTTGTTTTCTGTGGTTGGGAGAAGGCAGCCTTATAGTTTAAAACTTGCATATCAATGTCCAAAGTTATCTGATGATATAGACATGTTTTGAAGTGATTTTGGAACGGCCAAAGTAACTCTTGTCGTGTCCAAAATAACTAAAAGTTGCACGATAAAAGTAATTTTGAAACGACCAAAATCACTCGTGAACGTCCTTAGTTTTGTTAGCATTCTAGACCCACCCGCTTCGAGTATTTATAGAACCTTTCTAGTTCACGATTAGTAGAACTTACTCGATACGGTAGTATGGAGAAATCTGACTGTTTCTGTAATATTTCAAAATATAATTCGTCTCTTGACTTTGTAGTTTACGAATTAGAGTTGCCTATATCTATGGCTTACTGATGTAATGGTAAAACGTCAACTAAGTCGATATAGTATGGAAAGTGTATAATCCATATTTGATAACTTCTAGTTATGGGAATGAAGTTTTAGTTCATCAGCATATAGCGTATGGTGTACTGATGTAATTGTGTGAGATCTAACACTAGTTGGAGAGGGAAACAAAGCATTTCTTATAAGGGTGTGGAAACCTCTTCCAAGTAGACGCGTGTTAAAACCATGAGGCTGACGGCGATTCATAATGGGCCAAAGCGAACAATATTTACTAGCGGTGGGTTTGGGTTGTTACAAATGGTATCAGAGCCAGATACTGAGCGGTGTGCCAGTGATGCCATTGGGCCCCCAAGGGGGGTGGATTGTGAGATCTCACATCTGTTGGAGATGGGAACAAACCATTCCTTATAAGGGTGTGGAAACCTCTCCTTAGTAGATGTGTCTTAAAACCGTGAGACTGATAGCGATACGTAACAGATCAAAATGGACAATATTTGCTAGCGGTGGGCTTGGACTTGAGCTGTTATAAATTGTAAGGCTGCTTATCCCCAAAAAAATTTTATATGCCTGGTGTGACTAAATCATAGGCTCCCAAGATCAAACGAATTCCTTAGGAAAGGGATCTAAACGAGCCCTCTCCCGTTGCTGTTCCCGGATCACCCATTTTAGTTTCAAGTGATTCTAAGAATCCTTAGACGCTTTAGAACTCGAGTACCAAATAATATATGTGCATTATTACTTGTTGTTTATTACATGGAACATTAGTTTCAGTATATATGTGAATAATATTTTTTGGGAATTGAATGCAGTTCTTTTACTCCTCTATTTATTCCATAAAATTGGCATATTTGGATGCATCGGTCGGGGTCTCTGCAGAATGATATGGACATGTTTAGCTTCCTATTGCCATGCATGGGAGTACTGCTGCACTTTCATGTGTATCAAGCTTGCCAGTGTCAAAAGAACAAGACGACGCCATAGAAGAAGAGACCTAGAAGAAGAACTCGAAAGTGAAGAAGACGCAAAATATCGATATGGGTCATCAAGTGATTCGAGCAACGACTCCAAAAAGATTGAGTCGAGAAGGAGCAAACGGGTGTCTCGCAAACGGAGGAGGAGCCACAGAGGTTCTCAAACAAGTAAGACATTGAGGCCACCGAGCCATGGAATTCGAGTGAGGAGTGGTAGAGTGTTGGTCTATAGTAAGCATGGATCATCCAAGATCGTGCAGAAAGAAAGAAACTATAGAAGAGGAAGACAAATACGAAGGTAAGAGATTTGAACTTCTAACTTTTTACGATACATAAAATTTAAATCAGTCATATTAATTTTTGT

mRNA sequence

TCCAGATCTTTCAACGCGCTGTGGCCGACGGTTATCTTTCAAGAAACCGGCGGTGTGGAAATGAGTCACCCGCCACTCTTCTTCCATATGCGATTCTTCACTTCCCCTTGCTGTTTAAACATTCTTATCGATGAGTGTTTTGTTTTGTTTTGTTAGTGAATGCTGAATCTATCCGACGCAATGGGTAATGTAGCCAGTTCATTGGCCTCTGGTTTGTTTTTGGCTCTTAACAAAGTATTTGGATCTCCACTTGATTTTCTCTCTGGAAAATCCTGCAGTTCAGTGTGTGGATCAACATGGGATTTCATATGCTACATAGAAAATTTCTGCGTTGCCAATTTGCTAAAGATGGGCATGGTCGTGATCCTTGCATACTTTGTTCTTTTACTCCTCTATTTATTCCATAAAATTGGCATATTTGGATGCATCGGTCGGGGTCTCTGCAGAATGATATGGACATGTTTAGCTTCCTATTGCCATGCATGGGAGTACTGCTGCACTTTCATGTGTATCAAGCTTGCCAGTGTCAAAAGAACAAGACGACGCCATAGAAGAAGAGACCTAGAAGAAGAACTCGAAAGTGAAGAAGACGCAAAATATCGATATGGGTCATCAAGTGATTCGAGCAACGACTCCAAAAAGATTGAGTCGAGAAGGAGCAAACGGGTGTCTCGCAAACGGAGGAGGAGCCACAGAGGTTCTCAAACAAGTAAGACATTGAGGCCACCGAGCCATGGAATTCGAGTGAGGAGTGGTAGAGTGTTGGTCTATAGTAAGCATGGATCATCCAAGATCGTGCAGAAAGAAAGAAACTATAGAAGAGGAAGACAAATACGAAGGTAAGAGATTTGAACTTCTAACTTTTTACGATACATAAAATTTAAATCAGTCATATTAATTTTTGT

Coding sequence (CDS)

ATGCTGAATCTATCCGACGCAATGGGTAATGTAGCCAGTTCATTGGCCTCTGGTTTGTTTTTGGCTCTTAACAAAGTATTTGGATCTCCACTTGATTTTCTCTCTGGAAAATCCTGCAGTTCAGTGTGTGGATCAACATGGGATTTCATATGCTACATAGAAAATTTCTGCGTTGCCAATTTGCTAAAGATGGGCATGGTCGTGATCCTTGCATACTTTGTTCTTTTACTCCTCTATTTATTCCATAAAATTGGCATATTTGGATGCATCGGTCGGGGTCTCTGCAGAATGATATGGACATGTTTAGCTTCCTATTGCCATGCATGGGAGTACTGCTGCACTTTCATGTGTATCAAGCTTGCCAGTGTCAAAAGAACAAGACGACGCCATAGAAGAAGAGACCTAGAAGAAGAACTCGAAAGTGAAGAAGACGCAAAATATCGATATGGGTCATCAAGTGATTCGAGCAACGACTCCAAAAAGATTGAGTCGAGAAGGAGCAAACGGGTGTCTCGCAAACGGAGGAGGAGCCACAGAGGTTCTCAAACAAGTAAGACATTGAGGCCACCGAGCCATGGAATTCGAGTGAGGAGTGGTAGAGTGTTGGTCTATAGTAAGCATGGATCATCCAAGATCGTGCAGAAAGAAAGAAACTATAGAAGAGGAAGACAAATACGAAGGTAA

Protein sequence

MLNLSDAMGNVASSLASGLFLALNKVFGSPLDFLSGKSCSSVCGSTWDFICYIENFCVANLLKMGMVVILAYFVLLLLYLFHKIGIFGCIGRGLCRMIWTCLASYCHAWEYCCTFMCIKLASVKRTRRRHRRRDLEEELESEEDAKYRYGSSSDSSNDSKKIESRRSKRVSRKRRRSHRGSQTSKTLRPPSHGIRVRSGRVLVYSKHGSSKIVQKERNYRRGRQIRR
Homology
[Close]
BLAST of CmoCh01G014290 vs. ExPASy TrEMBL
Match: A0A6J1FIX0 (uncharacterized protein LOC111445893 OS=Cucurbita moschata OX=3662 GN=LOC111445893 PE=4 SV=1)

HSP 1 Score: 431.4 bits (1108), Expect = 2.3e-117
Identity = 227/227 (100.00%), Postives = 227/227 (100.00%), Query Frame = 0 

Query: 1   MLNLSDAMGNVASSLASGLFLALNKVFGSPLDFLSGKSCSSVCGSTWDFICYIENFCVAN 60
           MLNLSDAMGNVASSLASGLFLALNKVFGSPLDFLSGKSCSSVCGSTWDFICYIENFCVAN
Sbjct: 1   MLNLSDAMGNVASSLASGLFLALNKVFGSPLDFLSGKSCSSVCGSTWDFICYIENFCVAN 60

Query: 61  LLKMGMVVILAYFVLLLLYLFHKIGIFGCIGRGLCRMIWTCLASYCHAWEYCCTFMCIKL 120
           LLKMGMVVILAYFVLLLLYLFHKIGIFGCIGRGLCRMIWTCLASYCHAWEYCCTFMCIKL
Sbjct: 61  LLKMGMVVILAYFVLLLLYLFHKIGIFGCIGRGLCRMIWTCLASYCHAWEYCCTFMCIKL 120

Query: 121 ASVKRTRRRHRRRDLEEELESEEDAKYRYGSSSDSSNDSKKIESRRSKRVSRKRRRSHRG 180
           ASVKRTRRRHRRRDLEEELESEEDAKYRYGSSSDSSNDSKKIESRRSKRVSRKRRRSHRG
Sbjct: 121 ASVKRTRRRHRRRDLEEELESEEDAKYRYGSSSDSSNDSKKIESRRSKRVSRKRRRSHRG 180

Query: 181 SQTSKTLRPPSHGIRVRSGRVLVYSKHGSSKIVQKERNYRRGRQIRR 228
           SQTSKTLRPPSHGIRVRSGRVLVYSKHGSSKIVQKERNYRRGRQIRR
Sbjct: 181 SQTSKTLRPPSHGIRVRSGRVLVYSKHGSSKIVQKERNYRRGRQIRR 227

[Close]
BLAST of CmoCh01G014290 vs. ExPASy TrEMBL
Match: A0A6J1IVE5 (uncharacterized protein LOC111480312 OS=Cucurbita maxima OX=3661 GN=LOC111480312 PE=4 SV=1)

HSP 1 Score: 405.2 bits (1040), Expect = 1.8e-109
Identity = 213/227 (93.83%), Postives = 220/227 (96.92%), Query Frame = 0 

Query: 1   MLNLSDAMGNVASSLASGLFLALNKVFGSPLDFLSGKSCSSVCGSTWDFICYIENFCVAN 60
           MLNLSDAMGNVASSLASGLFLALNKVFGSPLDFLSGKSCSSVCGSTWDFICYIENFCVAN
Sbjct: 1   MLNLSDAMGNVASSLASGLFLALNKVFGSPLDFLSGKSCSSVCGSTWDFICYIENFCVAN 60

Query: 61  LLKMGMVVILAYFVLLLLYLFHKIGIFGCIGRGLCRMIWTCLASYCHAWEYCCTFMCIKL 120
           LLKMGMVVILAYFVLLLLYLFHKIGIFGCIGRG CRMIWTCLASYCHAWEYCCTFMC+KL
Sbjct: 61  LLKMGMVVILAYFVLLLLYLFHKIGIFGCIGRGFCRMIWTCLASYCHAWEYCCTFMCVKL 120

Query: 121 ASVKRTRRRHRRRDLEEELESEEDAKYRYGSSSDSSNDSKKIESRRSKRVSRKRRRSHRG 180
           ASVKRTRR HRRRDLEEELESEE+AK+RYGSS DSSNDS+KIESRRS+RVSRKRRRSHRG
Sbjct: 121 ASVKRTRRCHRRRDLEEELESEEEAKHRYGSSCDSSNDSEKIESRRSERVSRKRRRSHRG 180

Query: 181 SQTSKTLRPPSHGIRVRSGRVLVYSKHGSSKIVQKERNYRRGRQIRR 228
           SQTSKTLRP SHGIRVRSGRVLVYSKHGSSK VQK+R YRRGRQ +R
Sbjct: 181 SQTSKTLRPTSHGIRVRSGRVLVYSKHGSSKFVQKKRKYRRGRQRQR 227

[Close]
BLAST of CmoCh01G014290 vs. ExPASy TrEMBL
Match: A0A1S4DVV8 (protein HAPLESS 2 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103487604 PE=4 SV=1)

HSP 1 Score: 305.8 bits (782), Expect = 1.5e-79
Identity = 171/238 (71.85%), Postives = 190/238 (79.83%), Query Frame = 0 

Query: 8   MGNVASSLASGLFLALNKVFGSPLDFLSGKSCSSVCGSTWDFICYIENFCVANLLKMGMV 67
           MGNVASSLAS +F A+ K+FGSPLDFLSG+SCSSVCGSTWDFICYIENFCVANL+KMGMV
Sbjct: 1   MGNVASSLASDVFSAIGKIFGSPLDFLSGRSCSSVCGSTWDFICYIENFCVANLVKMGMV 60

Query: 68  VILAYFVLLLLYLFHKIGIFGCIGRGLCRMIWTCLASYCHAWEYCCTFMCIKLASVKRTR 127
            IL+YFVLLLLYL HKIGIFGCIGRGLCRMIWTCLASY +AWEYCC+FMCIKLASVKRTR
Sbjct: 61  FILSYFVLLLLYLLHKIGIFGCIGRGLCRMIWTCLASYFYAWEYCCSFMCIKLASVKRTR 120

Query: 128 RRH-RRRDLEEELESEEDAKYRYGSSSDSSNDSKKIESRRSKRVSRKRRRSHRGSQTSKT 187
           RRH RRRDLEEE ESEE  K ++ S+SDSSN  + +ESR S+  SR+ RR+H+ SQ  K+
Sbjct: 121 RRHVRRRDLEEEFESEE-GKCQHESTSDSSNVLEHVESRSSRWSSRRWRRNHKDSQKRKS 180

Query: 188 LRPPSHGIRVRSGRVLVYSKH--------------------GSSKIVQKERNYRRGRQ 225
           LRP  HG+RVRSGRVLVY KH                    GSSK V KER YRRGRQ
Sbjct: 181 LRPKGHGVRVRSGRVLVYGKHRRKSVEVGNHSNEIDSFGMYGSSKFVHKERKYRRGRQ 237

[Close]
BLAST of CmoCh01G014290 vs. ExPASy TrEMBL
Match: A0A0A0L1V0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G361810 PE=4 SV=1)

HSP 1 Score: 302.0 bits (772), Expect = 2.1e-78
Identity = 169/237 (71.31%), Postives = 188/237 (79.32%), Query Frame = 0 

Query: 8   MGNVASSLASGLFLALNKVFGSPLDFLSGKSCSSVCGSTWDFICYIENFCVANLLKMGMV 67
           MGNVASSLAS +F A+ K+FGSPLDFLSG+SCSSVCGSTWDFICYIENFCVANLLKMGMV
Sbjct: 1   MGNVASSLASDVFSAIGKIFGSPLDFLSGRSCSSVCGSTWDFICYIENFCVANLLKMGMV 60

Query: 68  VILAYFVLLLLYLFHKIGIFGCIGRGLCRMIWTCLASYCHAWEYCCTFMCIKLASVKRTR 127
            IL+YFVLLLLYL HKIGIF CIGRGLCRMIWTCLASY +AWEYCC FMCIKLASVKRTR
Sbjct: 61  FILSYFVLLLLYLLHKIGIFRCIGRGLCRMIWTCLASYFYAWEYCCGFMCIKLASVKRTR 120

Query: 128 RRH-RRRDLEEELESEEDAKYRYGSSSDSSNDSKKIESRRSKRVSRKRRRSHRGSQTSKT 187
           RRH RRRD+EEE E EE  K R+ S+SDS+N  + +ES+ S+RVS++ RR+HR SQ  K+
Sbjct: 121 RRHVRRRDMEEEFEIEE-GKCRHESTSDSTNVLEHVESKSSRRVSQRWRRNHRDSQRRKS 180

Query: 188 LRPPSHGIRVRSGRVLVYSKH--------------------GSSKIVQKERNYRRGR 224
           LRP  HG+RVRSGRVLVY KH                    GSSK V KER YRRGR
Sbjct: 181 LRPKGHGVRVRSGRVLVYGKHRRKSVEVGNHLNEIDSFGMYGSSKYVHKERKYRRGR 236

[Close]
BLAST of CmoCh01G014290 vs. ExPASy TrEMBL
Match: A0A6J1DMF3 (uncharacterized protein LOC111021352 OS=Momordica charantia OX=3673 GN=LOC111021352 PE=4 SV=1)

HSP 1 Score: 300.1 bits (767), Expect = 8.1e-78
Identity = 170/245 (69.39%), Postives = 189/245 (77.14%), Query Frame = 0 

Query: 1   MLNLSDAMGNVASSLASGLFLALNKVFGSPLDFLSGKSCSSVCGSTWDFICYIENFCVAN 60
           M NL D MGNVASS+ASG F A+ K+F SPLDFLSGKSCSSVCGSTWDFICYIENFCVAN
Sbjct: 1   MPNLPDIMGNVASSVASGFFSAVGKLFRSPLDFLSGKSCSSVCGSTWDFICYIENFCVAN 60

Query: 61  LLKMGMVVILAYFVLLLLYLFHKIGIFGCIGRGLCRMIWTCLASYCHAWEYCCTFMCIKL 120
           LLK+GMV+IL+ FV+LLLYL HKIGIFGCI RGLCRM WTC+ASY +AW+YCCTFMCIKL
Sbjct: 61  LLKLGMVLILSLFVILLLYLLHKIGIFGCICRGLCRMTWTCIASYFYAWDYCCTFMCIKL 120

Query: 121 ASVKRT-RRRHRRRDLEEELESEEDAKYRYGSSSDSSNDSKKIESRRSKRVSRKRRRSHR 180
            SVKRT RRRHRRRDLEEE ES E  K+RYGSSSDSS+  ++IE R S+R SR+ R +HR
Sbjct: 121 GSVKRTRRRRHRRRDLEEEFES-EGGKHRYGSSSDSSSVPERIELRSSQRASRRWRMNHR 180

Query: 181 GSQTSKTLRPPSHGIRVRSGRVLVYSK--------------------HGSSKIVQKERNY 225
           GSQ  K LRP S GIRVRSGR LVY K                    HGSSK V +E  Y
Sbjct: 181 GSQMRKALRPKSRGIRVRSGRTLVYGKHRRKSSEVVNRLGEIHSLGRHGSSKFVHEEIRY 240

[Close]
BLAST of CmoCh01G014290 vs. NCBI nr
Match: XP_022940192.1 (uncharacterized protein LOC111445893 [Cucurbita moschata] >XP_022940193.1 uncharacterized protein LOC111445893 [Cucurbita moschata])

HSP 1 Score: 431.4 bits (1108), Expect = 4.8e-117
Identity = 227/227 (100.00%), Postives = 227/227 (100.00%), Query Frame = 0 

Query: 1   MLNLSDAMGNVASSLASGLFLALNKVFGSPLDFLSGKSCSSVCGSTWDFICYIENFCVAN 60
           MLNLSDAMGNVASSLASGLFLALNKVFGSPLDFLSGKSCSSVCGSTWDFICYIENFCVAN
Sbjct: 1   MLNLSDAMGNVASSLASGLFLALNKVFGSPLDFLSGKSCSSVCGSTWDFICYIENFCVAN 60

Query: 61  LLKMGMVVILAYFVLLLLYLFHKIGIFGCIGRGLCRMIWTCLASYCHAWEYCCTFMCIKL 120
           LLKMGMVVILAYFVLLLLYLFHKIGIFGCIGRGLCRMIWTCLASYCHAWEYCCTFMCIKL
Sbjct: 61  LLKMGMVVILAYFVLLLLYLFHKIGIFGCIGRGLCRMIWTCLASYCHAWEYCCTFMCIKL 120

Query: 121 ASVKRTRRRHRRRDLEEELESEEDAKYRYGSSSDSSNDSKKIESRRSKRVSRKRRRSHRG 180
           ASVKRTRRRHRRRDLEEELESEEDAKYRYGSSSDSSNDSKKIESRRSKRVSRKRRRSHRG
Sbjct: 121 ASVKRTRRRHRRRDLEEELESEEDAKYRYGSSSDSSNDSKKIESRRSKRVSRKRRRSHRG 180

Query: 181 SQTSKTLRPPSHGIRVRSGRVLVYSKHGSSKIVQKERNYRRGRQIRR 228
           SQTSKTLRPPSHGIRVRSGRVLVYSKHGSSKIVQKERNYRRGRQIRR
Sbjct: 181 SQTSKTLRPPSHGIRVRSGRVLVYSKHGSSKIVQKERNYRRGRQIRR 227

[Close]
BLAST of CmoCh01G014290 vs. NCBI nr
Match: KAG7031669.1 (Protein HAPLESS 2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 416.4 bits (1069), Expect = 1.6e-112
Identity = 222/228 (97.37%), Postives = 225/228 (98.68%), Query Frame = 0 

Query: 1   MLNLSDAMGNVASSLASGLFLALNKVFGSPLDFLSGKSCSSVCGSTWDFICYIENFCVAN 60
           MLNLSDAMGNVASSLASGLFLALNKVFGSPLDFLSGKSCSSVCGSTWDFICYIENFCVAN
Sbjct: 1   MLNLSDAMGNVASSLASGLFLALNKVFGSPLDFLSGKSCSSVCGSTWDFICYIENFCVAN 60

Query: 61  LLKMGMVVILAYFVLLLLYLFHKIGIFGCIGRGLCRMIWTCLASYCHAWEYCCTFMCIKL 120
           LLKMGMVVILAYFVLLLLYLFHKIGIFGCIGRGLCRMIWTCLASYCHAWEYCCTFMCIKL
Sbjct: 61  LLKMGMVVILAYFVLLLLYLFHKIGIFGCIGRGLCRMIWTCLASYCHAWEYCCTFMCIKL 120

Query: 121 ASVKRT-RRRHRRRDLEEELESEEDAKYRYGSSSDSSNDSKKIESRRSKRVSRKRRRSHR 180
           ASVKRT RRRHRRRDLEEELESEE+AK+RYGSSSDSSNDS+KIESRRSKRVSRKRRRSHR
Sbjct: 121 ASVKRTRRRRHRRRDLEEELESEEEAKHRYGSSSDSSNDSEKIESRRSKRVSRKRRRSHR 180

Query: 181 GSQTSKTLRPPSHGIRVRSGRVLVYSKHGSSKIVQKERNYRRGRQIRR 228
           GSQTSKTLRP SHGIRVRSGRVLVYSKHGSSKIVQKER YRRGRQIRR
Sbjct: 181 GSQTSKTLRPTSHGIRVRSGRVLVYSKHGSSKIVQKERKYRRGRQIRR 228

[Close]
BLAST of CmoCh01G014290 vs. NCBI nr
Match: KAG6608041.1 (Protein HAPLESS 2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 416.0 bits (1068), Expect = 2.1e-112
Identity = 222/228 (97.37%), Postives = 225/228 (98.68%), Query Frame = 0 

Query: 1   MLNLSDAMGNVASSLASGLFLALNKVFGSPLDFLSGKSCSSVCGSTWDFICYIENFCVAN 60
           MLNLSDAMGNVASSLASGLFLALNKVFGSPLDFLSGKSCSSVCGSTWDFICYIENFCVAN
Sbjct: 1   MLNLSDAMGNVASSLASGLFLALNKVFGSPLDFLSGKSCSSVCGSTWDFICYIENFCVAN 60

Query: 61  LLKMGMVVILAYFVLLLLYLFHKIGIFGCIGRGLCRMIWTCLASYCHAWEYCCTFMCIKL 120
           LLKMGMVVILAYFVLLLLYLFHKIGIFGCIGRGLCRMIWTCLASYCHAWEYCCTFMCIKL
Sbjct: 61  LLKMGMVVILAYFVLLLLYLFHKIGIFGCIGRGLCRMIWTCLASYCHAWEYCCTFMCIKL 120

Query: 121 ASVKRT-RRRHRRRDLEEELESEEDAKYRYGSSSDSSNDSKKIESRRSKRVSRKRRRSHR 180
           ASVKRT RRRHRRRDLEEELESEE+AK+RYGSSSDSSNDS+KIESRRSKRVSRKRRRSHR
Sbjct: 121 ASVKRTRRRRHRRRDLEEELESEEEAKHRYGSSSDSSNDSEKIESRRSKRVSRKRRRSHR 180

Query: 181 GSQTSKTLRPPSHGIRVRSGRVLVYSKHGSSKIVQKERNYRRGRQIRR 228
           GSQTSKTLRP SHGIRVRSGRVLVYSKHGSSKIVQKER YRRGRQIRR
Sbjct: 181 GSQTSKTLRPRSHGIRVRSGRVLVYSKHGSSKIVQKERKYRRGRQIRR 228

[Close]
BLAST of CmoCh01G014290 vs. NCBI nr
Match: XP_023523489.1 (protein HAPLESS 2 [Cucurbita pepo subsp. pepo] >XP_023523490.1 protein HAPLESS 2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 410.6 bits (1054), Expect = 8.8e-111
Identity = 216/226 (95.58%), Postives = 221/226 (97.79%), Query Frame = 0 

Query: 1   MLNLSDAMGNVASSLASGLFLALNKVFGSPLDFLSGKSCSSVCGSTWDFICYIENFCVAN 60
           MLNLSDAMGNVASSLASGLFLALNKVFGSPLDFLSGKSCSSVCGSTWDFICYIENFCVAN
Sbjct: 1   MLNLSDAMGNVASSLASGLFLALNKVFGSPLDFLSGKSCSSVCGSTWDFICYIENFCVAN 60

Query: 61  LLKMGMVVILAYFVLLLLYLFHKIGIFGCIGRGLCRMIWTCLASYCHAWEYCCTFMCIKL 120
           LLKMGMVVILAYFVLLLLYLFHKIGIFGCIGRGLCRMIWTCLASYCHAWEYCCTFMCIKL
Sbjct: 61  LLKMGMVVILAYFVLLLLYLFHKIGIFGCIGRGLCRMIWTCLASYCHAWEYCCTFMCIKL 120

Query: 121 ASVKRTRRRHRRRDLEEELESEEDAKYRYGSSSDSSNDSKKIESRRSKRVSRKRRRSHRG 180
           ASVKRTRRRHRRRDLEEELESEE+AK+RYGSSSDSSN+S+KIESRR KRVSRK+RRSHRG
Sbjct: 121 ASVKRTRRRHRRRDLEEELESEEEAKHRYGSSSDSSNNSEKIESRRRKRVSRKQRRSHRG 180

Query: 181 SQTSKTLRPPSHGIRVRSGRVLVYSKHGSSKIVQKERNYRRGRQIR 227
           SQTSKTLRP  HGIRVRSGRVLVYSKHGSSK VQKER YRRGRQIR
Sbjct: 181 SQTSKTLRPTFHGIRVRSGRVLVYSKHGSSKFVQKERKYRRGRQIR 226

[Close]
BLAST of CmoCh01G014290 vs. NCBI nr
Match: XP_022981050.1 (uncharacterized protein LOC111480312 [Cucurbita maxima] >XP_022981051.1 uncharacterized protein LOC111480312 [Cucurbita maxima])

HSP 1 Score: 405.2 bits (1040), Expect = 3.7e-109
Identity = 213/227 (93.83%), Postives = 220/227 (96.92%), Query Frame = 0 

Query: 1   MLNLSDAMGNVASSLASGLFLALNKVFGSPLDFLSGKSCSSVCGSTWDFICYIENFCVAN 60
           MLNLSDAMGNVASSLASGLFLALNKVFGSPLDFLSGKSCSSVCGSTWDFICYIENFCVAN
Sbjct: 1   MLNLSDAMGNVASSLASGLFLALNKVFGSPLDFLSGKSCSSVCGSTWDFICYIENFCVAN 60

Query: 61  LLKMGMVVILAYFVLLLLYLFHKIGIFGCIGRGLCRMIWTCLASYCHAWEYCCTFMCIKL 120
           LLKMGMVVILAYFVLLLLYLFHKIGIFGCIGRG CRMIWTCLASYCHAWEYCCTFMC+KL
Sbjct: 61  LLKMGMVVILAYFVLLLLYLFHKIGIFGCIGRGFCRMIWTCLASYCHAWEYCCTFMCVKL 120

Query: 121 ASVKRTRRRHRRRDLEEELESEEDAKYRYGSSSDSSNDSKKIESRRSKRVSRKRRRSHRG 180
           ASVKRTRR HRRRDLEEELESEE+AK+RYGSS DSSNDS+KIESRRS+RVSRKRRRSHRG
Sbjct: 121 ASVKRTRRCHRRRDLEEELESEEEAKHRYGSSCDSSNDSEKIESRRSERVSRKRRRSHRG 180

Query: 181 SQTSKTLRPPSHGIRVRSGRVLVYSKHGSSKIVQKERNYRRGRQIRR 228
           SQTSKTLRP SHGIRVRSGRVLVYSKHGSSK VQK+R YRRGRQ +R
Sbjct: 181 SQTSKTLRPTSHGIRVRSGRVLVYSKHGSSKFVQKKRKYRRGRQRQR 227

[Close]
BLAST of CmoCh01G014290 vs. TAIR 10
Match: AT1G21722.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G78922.1); Has 47 Blast hits to 47 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 1; Plants - 42; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). )

HSP 1 Score: 138.7 bits (348), Expect = 6.0e-33
Identity = 93/230 (40.43%), Postives = 123/230 (53.48%), Query Frame = 0 

Query: 8   MGNVASSLASGLFLALNKVFGSPLDFLSGKSCSSVCGSTWDFICYIENFCVANLLKMGMV 67
           MGNV  S  +G   ++   FGSPLDFLSGKSCSSVC S WDFICY+ENFCVANL K  ++
Sbjct: 1   MGNVMDSFFTGFSHSIGNFFGSPLDFLSGKSCSSVCPSPWDFICYVENFCVANLAKTALI 60

Query: 68  VILAYFVLLLLYLFHKIGIFGCIGRGLCRMIWTCLASYCHAWEYCCTFMCIKLASVKRTR 127
           +IL+YF L  +Y+ +K+G + CI  G  +++W  ++ + +   YCC+F C  L   KR R
Sbjct: 61  LILSYFFLFFIYMLYKVGFWHCIIHGFFKLLWVLVSCWFYMLGYCCSFFCYDLLHSKRRR 120

Query: 128 RRHRRRDLEEELESEEDAKYRYGSSSDSSNDSKKIESRRSKRVSRKRRRSHRGSQTSKTL 187
           RR   R +EE+ +   D         D  +D       RSKR  RK  R        K+L
Sbjct: 121 RRRHNRYIEEDYDDNSD-------DDDDVDDDGSFTYHRSKRECRKEER------LRKSL 180

Query: 188 RPPSHGIRV------RSGRVLVYSKHGSSKI----VQKERNYRRGRQIRR 228
           RP +H +RV      RS   L     G S I    V +E  + R    RR
Sbjct: 181 RPRNHRVRVGVRKDHRSDSGLSQHADGGSPIHGVRVSRESKFARKVSKRR 217

[Close]
BLAST of CmoCh01G014290 vs. TAIR 10
Match: AT1G78922.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G21722.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 72.0 bits (175), Expect = 6.9e-13
Identity = 62/227 (27.31%), Postives = 110/227 (48.46%), Query Frame = 0 

Query: 8   MGNVASSLASGLFLALNKVFGSPLDFLSGKSCSSVCGSTWDFICYIENFCVANLLKMGMV 67
           MGN     ++ +   +  +F +PL    G+SC  VC   WD  C+IE+FC+ ++ K+ ++
Sbjct: 1   MGNAIGKASNDIGGFIGNIFTAPLKATLGRSCLDVCSGPWDLECFIEHFCLPDIAKLVLM 60

Query: 68  VILAYFVLLLLYLFHKIGIFGCIGRGLCRMIWTCLASYCHAWEYCCTFMCIKLASVKRTR 127
             L + +L+ + L  K+GI  C+ + +C+M     A+Y        + +C  L ++ R  
Sbjct: 61  SSLCFIILMFITLLFKLGICQCVVKSICKMSCAACAAYWFDIGEMISCLCHSLTNINRVN 120

Query: 128 RRHRRRDLEEELESEEDAKYRYGS--SSDSSNDSKKIES----RRSKRVSRKRRRSHRGS 187
           RR +R      L+  E   Y Y S   S SS+   +I++    +R +R+  K    H GS
Sbjct: 121 RRRKR------LDDIEATTYDYPSDDESSSSDSPSRIDNIRPKQRRRRLGSKHSHHHHGS 180

Query: 188 QTS--KTLRPPSHGIRVRSGRVLVYSKHGSSKIVQKERNYRRGRQIR 227
             +  + +R PS  + VR G        G S+ V++     + R+I+
Sbjct: 181 NRNNRRLIRLPSRQLSVRVG--------GKSRRVRRSTRKIKSRKIK 213

[Close]
BLAST of CmoCh01G014290 vs. TAIR 10
Match: AT4G11720.1 (hapless 2 )

HSP 1 Score: 45.1 bits (105), Expect = 9.0e-05
Identity = 21/63 (33.33%), Postives = 40/63 (63.49%), Query Frame = 0 

Query: 25  KVFGSPLDFLSGKSCSSVCGSTWDFICYIENFCVANLLKMGMVVILAYFVLLLLYLFHKI 84
           K+    +DF++G +C + C S +DF C+I+  C++ ++  G+++ L     LLL+L H+ 
Sbjct: 526 KIINGLVDFITGDTCRNKCSSFFDFSCHIQYVCLSWMVMFGLLLALFPITCLLLWLLHQK 585

Query: 85  GIF 88
           G+F
Sbjct: 586 GLF 588

The following BLAST results are available for this feature:
BLAST of CmoCh01G014290 vs.
Match NameE-valueIdentityDescription
BLAST of CmoCh01G014290 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1FIX02.3e-117100.00uncharacterized protein LOC111445893 OS=Cucurbita moschata OX=3662 GN=LOC1114458... [more]
A0A6J1IVE51.8e-10993.83uncharacterized protein LOC111480312 OS=Cucurbita maxima OX=3661 GN=LOC111480312... [more]
A0A1S4DVV81.5e-7971.85protein HAPLESS 2 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103487604 PE=4 SV=1[more]
A0A0A0L1V02.1e-7871.31Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G361810 PE=4 SV=1[more]
A0A6J1DMF38.1e-7869.39uncharacterized protein LOC111021352 OS=Momordica charantia OX=3673 GN=LOC111021... [more]
BLAST of CmoCh01G014290 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022940192.14.8e-117100.00uncharacterized protein LOC111445893 [Cucurbita moschata] >XP_022940193.1 unchar... [more]
KAG7031669.11.6e-11297.37Protein HAPLESS 2 [Cucurbita argyrosperma subsp. argyrosperma][more]
KAG6608041.12.1e-11297.37Protein HAPLESS 2, partial [Cucurbita argyrosperma subsp. sororia][more]
XP_023523489.18.8e-11195.58protein HAPLESS 2 [Cucurbita pepo subsp. pepo] >XP_023523490.1 protein HAPLESS 2... [more]
XP_022981050.13.7e-10993.83uncharacterized protein LOC111480312 [Cucurbita maxima] >XP_022981051.1 uncharac... [more]
BLAST of CmoCh01G014290 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G21722.16.0e-3340.43unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT1G78922.16.9e-1327.31unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT4G11720.19.0e-0533.33hapless 2 [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 125..145
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 146..227
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 166..182
NoneNo IPR availablePANTHERPTHR35278TRANSMEMBRANE PROTEIN-RELATEDcoord: 8..220
NoneNo IPR availablePANTHERPTHR35278:SF1F8K7.16coord: 8..220

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh01G014290.1CmoCh01G014290.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane