CmoCh01G014270 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh01G014270
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	nuclear receptor subfamily 4 group A member 3-like
Location	Cmo_Chr01: 11172447 .. 11173783 (+)
RNA-Seq Expression	CmoCh01G014270
Synteny	CmoCh01G014270

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACGTTGATGAATTTTACCGGCAACCGGCTGCCGTTCCTTTCAAATGGGAGATCAAACCCGGCGTCCCCAGGAACCACCACCGCCTCCACCAGTTCCCCACTCACTCTCCTCAACAACACAAGAAGCTAAAGCCTCCTCCTGCTGTAACTGCAACCCAATTCCACCGTTCTTCCAACTCCCTCCGAACCCGGTCCGACCGATGGTCTTCCACCCAGTCCAAACTTGCCGAACCCGAGCAGGTCTCGGTCGGTTGCTTCTCCTCGCCTTTGCCGAACCGGAAAGCGAGCAAGATTGTTAACAGGAAACCCGAACCGGATTACGCCTCTGAGTTGGAGACTTTGCCGCGGTGGTCGGTTTCCAGTAAGAAGTCGATTTCGCCGTTCAGAAACTCGGTTTCGTCGTCGTCGCTTTCGTCGTACCAGTCATCGCCCCGTCCGACTAGTGATTCTGAGTGGGCCGGATTTGGGCTCTTTTGATTGGACCATATAAGACCGTGGGCTTATGAAACGTTGGGCTGAATTTATAGAGGCCAGGCCCATTTTTCGCCCCGTCTTGGTGGTCCTTTTGAGTGGGCTTTAGAGTTATTGGGCTTAGGTACCTCGAAAGCCCTTTTAAGAGTAGAAATAAGAAGCGTTAAATCCCGATTGTATTGTGCTTTGGAATCATAGGGATTTTCTTAAAAAACCCATAAATATGAAATATAAACCTTAAATATTAAGACCTTTGTTTCCTCGTGCTATTTTATTTTTCTGATCTTTTTTCCTATCCAAACATTTTAATGCTTGATAAAATTAGAAGTTCATAATTTTTAGGGACAATTTTTTTTTTATTTATTTATATTGAGGATGAGAGGAACCAAAATTTCAAAGGAAGGCTTAATAATAATGAATATGGAAATATATATATATATTTTTTATTGATAAATTAATAAGCTGAATAAATTTTCATCTTTTTTTTTAAATCTTTATAAAAAAAAATACAATGTTAACATTAATATAAATGGTTGTGCCTTGGCTAACCGTTTGAAACACTGAAAAAAAAATCATTAGCTTATCAAATTATCTATTGAGTCATGAAGAAAATTCAACAAAAGACAGAATCAACTTTAAGAATCCTTATATTGAAGGAAGGAAGCTACGTAAAATGTGAAGTAACTCCTAATATGGCAGTAAAGACAAGACGTGTCAACATATCAAGGATCTACAGACTGAAGGAAATAAGTTACGAAAAATGTGAAGTAACTCCTAATATAGGAGTAAAGACAAGGCGTGTCAATATATCGAGGATCCTCAGACAGATTGAAGGAAGTAAGTTACGAAAAAATGTGAAGTAA

mRNA sequence

ATGGACGTTGATGAATTTTACCGGCAACCGGCTGCCGTTCCTTTCAAATGGGAGATCAAACCCGGCGTCCCCAGGAACCACCACCGCCTCCACCAGTTCCCCACTCACTCTCCTCAACAACACAAGAAGCTAAAGCCTCCTCCTGCTGTAACTGCAACCCAATTCCACCGTTCTTCCAACTCCCTCCGAACCCGGTCCGACCGATGGTCTTCCACCCAGTCCAAACTTGCCGAACCCGAGCAGGTCTCGGTCGGTTGCTTCTCCTCGCCTTTGCCGAACCGGAAAGCGAGCAAGATTGTTAACAGGAAACCCGAACCGGATTACGCCTCTGAGTTGGAGACTTTGCCGCGGTGGTCGGTTTCCAGTAAGAAGTCGATTTCGCCGTTCAGAAACTCGGTTTCGTCGTCGTCGCTTTCGTCGTACCAGTCATCGCCCCTAAAGACAAGACGTGTCAACATATCAAGGATCTACAGACTGAAGGAAATAAGTTACGAAAAATGTGAAGTAACTCCTAATATAGGAGTAAAGACAAGGCGTGTCAATATATCGAGGATCCTCAGACAGATTGAAGGAAGTAAGTTACGAAAAAATGTGAAGTAA

Coding sequence (CDS)

ATGGACGTTGATGAATTTTACCGGCAACCGGCTGCCGTTCCTTTCAAATGGGAGATCAAACCCGGCGTCCCCAGGAACCACCACCGCCTCCACCAGTTCCCCACTCACTCTCCTCAACAACACAAGAAGCTAAAGCCTCCTCCTGCTGTAACTGCAACCCAATTCCACCGTTCTTCCAACTCCCTCCGAACCCGGTCCGACCGATGGTCTTCCACCCAGTCCAAACTTGCCGAACCCGAGCAGGTCTCGGTCGGTTGCTTCTCCTCGCCTTTGCCGAACCGGAAAGCGAGCAAGATTGTTAACAGGAAACCCGAACCGGATTACGCCTCTGAGTTGGAGACTTTGCCGCGGTGGTCGGTTTCCAGTAAGAAGTCGATTTCGCCGTTCAGAAACTCGGTTTCGTCGTCGTCGCTTTCGTCGTACCAGTCATCGCCCCTAAAGACAAGACGTGTCAACATATCAAGGATCTACAGACTGAAGGAAATAAGTTACGAAAAATGTGAAGTAACTCCTAATATAGGAGTAAAGACAAGGCGTGTCAATATATCGAGGATCCTCAGACAGATTGAAGGAAGTAAGTTACGAAAAAATGTGAAGTAA

Protein sequence

MDVDEFYRQPAAVPFKWEIKPGVPRNHHRLHQFPTHSPQQHKKLKPPPAVTATQFHRSSNSLRTRSDRWSSTQSKLAEPEQVSVGCFSSPLPNRKASKIVNRKPEPDYASELETLPRWSVSSKKSISPFRNSVSSSSLSSYQSSPLKTRRVNISRIYRLKEISYEKCEVTPNIGVKTRRVNISRILRQIEGSKLRKNVK

Homology

[Close]

BLAST of CmoCh01G014270 vs. ExPASy TrEMBL
Match: A0A6J1FHC7 (uncharacterized protein LOC111445775 OS=Cucurbita moschata OX=3662 GN=LOC111445775 PE=4 SV=1)

HSP 1 Score: 292.0 bits (746), Expect = 1.9e-75
Identity = 146/148 (98.65%), Postives = 146/148 (98.65%), Query Frame = 0


Query: 1   MDVDEFYRQPAAVPFKWEIKPGVPRNHHRLHQFPTHSPQQHKKLKPPPAVTATQFHRSSN 60
           MDVDEFYRQPAAVPFKWEIKPGVPRNHHRLHQFPTHSPQQHKKLKPPPAVTATQFHRSSN
Sbjct: 1   MDVDEFYRQPAAVPFKWEIKPGVPRNHHRLHQFPTHSPQQHKKLKPPPAVTATQFHRSSN 60

Query: 61  SLRTRSDRWSSTQSKLAEPEQVSVGCFSSPLPNRKASKIVNRKPEPDYASELETLPRWSV 120
           SLRTRSDRWSSTQSKLAEPEQVSVGCFSSPLPNRKASKIVNRKPEPDYASELETLPRWSV
Sbjct: 61  SLRTRSDRWSSTQSKLAEPEQVSVGCFSSPLPNRKASKIVNRKPEPDYASELETLPRWSV 120

Query: 121 SSKKSISPFRNSVSSSSLSSYQSSPLKT 149
           SSKKSISPFRNSVSSSSLSSYQSSP  T
Sbjct: 121 SSKKSISPFRNSVSSSSLSSYQSSPRPT 148

[Close]

BLAST of CmoCh01G014270 vs. ExPASy TrEMBL
Match: A0A6J1ISY3 (uncharacterized protein LOC111480325 OS=Cucurbita maxima OX=3661 GN=LOC111480325 PE=4 SV=1)

HSP 1 Score: 272.3 bits (695), Expect = 1.6e-69
Identity = 139/152 (91.45%), Postives = 143/152 (94.08%), Query Frame = 0


Query: 1   MDVDEFYRQPAAVPFKWEIKPGVPRNHHRLHQFPTHSPQQHKKLKPPPAVTATQFHRSSN 60
           MDVDEFYRQPAAVPFKWEIKPGVPRNHH LH FPTHSPQQHKKLKPPPAVTATQFHRSSN
Sbjct: 1   MDVDEFYRQPAAVPFKWEIKPGVPRNHHCLHPFPTHSPQQHKKLKPPPAVTATQFHRSSN 60

Query: 61  SLRTRSDRWSSTQSKLAEPEQVSVGCFSSPLPNRKASKIVNRKPEPDYASELETLPRWSV 120
           SLRTRSDRWSS+QSKLAEPEQVSVGCFSSPLPNRKA+KI+NRKPEPD ASELETLPRWS+
Sbjct: 61  SLRTRSDRWSSSQSKLAEPEQVSVGCFSSPLPNRKATKILNRKPEPDCASELETLPRWSL 120

Query: 121 SSKKSISPFRNSVSS----SSLSSYQSSPLKT 149
           SSKKSISPFRNSVSS    SSLSSYQSSP  T
Sbjct: 121 SSKKSISPFRNSVSSSPSPSSLSSYQSSPRPT 152

[Close]

BLAST of CmoCh01G014270 vs. ExPASy TrEMBL
Match: A0A1S3BAM4 (uncharacterized protein LOC103487607 OS=Cucumis melo OX=3656 GN=LOC103487607 PE=4 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 9.6e-43
Identity = 109/159 (68.55%), Postives = 120/159 (75.47%), Query Frame = 0


Query: 1   MDVDEFYRQPAAVPFKWEIKPGVPRNHHRLHQFPTHSPQQH--KKLKPPPAVTATQFHRS 60
           MD DEFYR+PAAVPFKWEIKPGVPRNHHR  Q PTHSP QH  +KLKPPPAV  + F   
Sbjct: 1   MDTDEFYRKPAAVPFKWEIKPGVPRNHHRPRQSPTHSPPQHHRQKLKPPPAV--SHFPHP 60

Query: 61  SNSL----RTRSDRWSSTQSKLAEPEQV-SVGCFSSPLPNRKASKIVNRK-PEPDYASEL 120
           SNSL    RTRSDRW   +S     EQV S GCF SPLPNRK+ K ++RK PEPDY+S+L
Sbjct: 61  SNSLHSSPRTRSDRWRFVRS-----EQVSSSGCFPSPLPNRKSPKALSRKFPEPDYSSDL 120

Query: 121 ETLPRWSVSSKKSISPFRNSVSS---SSLSSYQSSPLKT 149
           +TL RWSVSS+KSISPFR SVSS   SS SSYQSSP  T
Sbjct: 121 DTLSRWSVSSRKSISPFRYSVSSSSPSSFSSYQSSPRPT 152

[Close]

BLAST of CmoCh01G014270 vs. ExPASy TrEMBL
Match: A0A6J1BQH3 (uncharacterized protein DKFZp434B061-like OS=Momordica charantia OX=3673 GN=LOC111004696 PE=4 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 4.8e-42
Identity = 105/160 (65.62%), Postives = 116/160 (72.50%), Query Frame = 0


Query: 1   MDVDEFYRQPAAVPFKWEIKPGVPRNHHRLHQFPTHSPQQHKKLKPPPAVTATQFHRSS- 60
           MD DEFYR+PAAVPFKWEIKPGVPR HHRL   P+  PQ   KLKPPP V  + F R S 
Sbjct: 1   MDADEFYRRPAAVPFKWEIKPGVPRAHHRLCPSPSPPPQ---KLKPPPVV--SHFRRPSE 60

Query: 61  -------NSLRTRSDRWSSTQSKLAEPEQVS--VGCFSSPLPNRKASKIVNRKPEPDYAS 120
                  +S RTRSDRW   +S LAEP QVS   GCF SP PNRK+ K +NRKPEP+Y +
Sbjct: 61  SSSCSLHSSSRTRSDRWRFARSSLAEPPQVSPATGCFPSPSPNRKSGKSMNRKPEPNYTT 120

Query: 121 ELETLPRWSVSSKKSISPFRNSVSS--SSLSSYQSSPLKT 149
           ELETL RWSVSS+KSISPFR+SVSS  SS SSYQSSP  T
Sbjct: 121 ELETLSRWSVSSRKSISPFRDSVSSSPSSFSSYQSSPRPT 155

[Close]

BLAST of CmoCh01G014270 vs. ExPASy TrEMBL
Match: A0A0A0KY52 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G361790 PE=4 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 6.5e-31
Identity = 82/125 (65.60%), Postives = 92/125 (73.60%), Query Frame = 0


Query: 1   MDVDEFYRQPAAVPFKWEIKPGVPRNHHRLHQFPTHSPQQH--KKLKPPPAVTATQFHRS 60
           MD DEFYRQPAAVPFKWEIKPGVPRNHHRL   PTHSP QH  +KLKPPPAV  + F   
Sbjct: 1   MDTDEFYRQPAAVPFKWEIKPGVPRNHHRLRHSPTHSPPQHHRQKLKPPPAV--SHFPHP 60

Query: 61  SNSL----RTRSDRWSSTQSKLAEPEQV-SVGCFSSPLPNRKASKIVNRK-PEPDYASEL 118
            NSL    RT+S+RW   +S     EQV S GCF SPLPNRK+ K V+RK PEPDY+S+L
Sbjct: 61  PNSLHSSPRTQSERWRFVRS-----EQVSSSGCFPSPLPNRKSPKSVSRKLPEPDYSSDL 118

[Close]

BLAST of CmoCh01G014270 vs. NCBI nr
Match: XP_022940016.1 (uncharacterized protein LOC111445775 [Cucurbita moschata])

HSP 1 Score: 292.0 bits (746), Expect = 4.0e-75
Identity = 146/148 (98.65%), Postives = 146/148 (98.65%), Query Frame = 0


Query: 1   MDVDEFYRQPAAVPFKWEIKPGVPRNHHRLHQFPTHSPQQHKKLKPPPAVTATQFHRSSN 60
           MDVDEFYRQPAAVPFKWEIKPGVPRNHHRLHQFPTHSPQQHKKLKPPPAVTATQFHRSSN
Sbjct: 1   MDVDEFYRQPAAVPFKWEIKPGVPRNHHRLHQFPTHSPQQHKKLKPPPAVTATQFHRSSN 60

Query: 61  SLRTRSDRWSSTQSKLAEPEQVSVGCFSSPLPNRKASKIVNRKPEPDYASELETLPRWSV 120
           SLRTRSDRWSSTQSKLAEPEQVSVGCFSSPLPNRKASKIVNRKPEPDYASELETLPRWSV
Sbjct: 61  SLRTRSDRWSSTQSKLAEPEQVSVGCFSSPLPNRKASKIVNRKPEPDYASELETLPRWSV 120

Query: 121 SSKKSISPFRNSVSSSSLSSYQSSPLKT 149
           SSKKSISPFRNSVSSSSLSSYQSSP  T
Sbjct: 121 SSKKSISPFRNSVSSSSLSSYQSSPRPT 148

[Close]

BLAST of CmoCh01G014270 vs. NCBI nr
Match: XP_023525665.1 (uncharacterized protein LOC111789202 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 277.3 bits (708), Expect = 1.0e-70
Identity = 141/151 (93.38%), Postives = 143/151 (94.70%), Query Frame = 0


Query: 1   MDVDEFYRQPAAVPFKWEIKPGVPRNHHRLHQFPTHSPQQHKKLKPPPAVTATQFHRSSN 60
           MDVDEFYRQPAAVPFKWEIKPGVPRNHHRLH FPTHSPQQHKKLKPPPAVTATQFHRSSN
Sbjct: 1   MDVDEFYRQPAAVPFKWEIKPGVPRNHHRLHPFPTHSPQQHKKLKPPPAVTATQFHRSSN 60

Query: 61  SLRTRSDRWSSTQSKLAEPEQVSVGCFSSPLPNRKASKIVNRKPEPDYASELETLPRWSV 120
           SLRTRSDRWSSTQSKLA+PEQV VGCFSSPLPNRKA+KIVNRKPEPDYASELETLPRWSV
Sbjct: 61  SLRTRSDRWSSTQSKLAQPEQVLVGCFSSPLPNRKATKIVNRKPEPDYASELETLPRWSV 120

Query: 121 SSKKSISPFRNSVS---SSSLSSYQSSPLKT 149
           SSKKSISPFRNSVS   SSS SSYQSSP  T
Sbjct: 121 SSKKSISPFRNSVSSSPSSSRSSYQSSPRPT 151

[Close]

BLAST of CmoCh01G014270 vs. NCBI nr
Match: KAG6608039.1 (hypothetical protein SDJN03_01381, partial [Cucurbita argyrosperma subsp. sororia] >KAG7031666.1 hypothetical protein SDJN02_05707, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 276.9 bits (707), Expect = 1.3e-70
Identity = 142/151 (94.04%), Postives = 143/151 (94.70%), Query Frame = 0


Query: 1   MDVDEFYRQPAAVPFKWEIKPGVPRNHHRLHQFPTHSPQQHKKLKPPPAVTATQFHRSSN 60
           MDVDEFYRQPAAVPFKWEIKPGVPRNHHRLH FPTHSPQQHKKLKPPPAVTATQFHRSSN
Sbjct: 1   MDVDEFYRQPAAVPFKWEIKPGVPRNHHRLHPFPTHSPQQHKKLKPPPAVTATQFHRSSN 60

Query: 61  SLRTRSDRWSSTQSKLAEPEQVSVGCFSSPLPNRKASKIVNRKPEPDYASELETLPRWSV 120
           SLRTRSDRW S+QSKLAEPEQVSVGCFSSPLPNRKASKIVNRKPEPD ASELETLPRWSV
Sbjct: 61  SLRTRSDRWVSSQSKLAEPEQVSVGCFSSPLPNRKASKIVNRKPEPDCASELETLPRWSV 120

Query: 121 SSKKSISPFRNSVS---SSSLSSYQSSPLKT 149
           SSKKSISPFRNSVS   SSSLSSYQSSP  T
Sbjct: 121 SSKKSISPFRNSVSSSPSSSLSSYQSSPRPT 151

[Close]

BLAST of CmoCh01G014270 vs. NCBI nr
Match: XP_022981067.1 (uncharacterized protein LOC111480325 [Cucurbita maxima])

HSP 1 Score: 272.3 bits (695), Expect = 3.3e-69
Identity = 139/152 (91.45%), Postives = 143/152 (94.08%), Query Frame = 0


Query: 1   MDVDEFYRQPAAVPFKWEIKPGVPRNHHRLHQFPTHSPQQHKKLKPPPAVTATQFHRSSN 60
           MDVDEFYRQPAAVPFKWEIKPGVPRNHH LH FPTHSPQQHKKLKPPPAVTATQFHRSSN
Sbjct: 1   MDVDEFYRQPAAVPFKWEIKPGVPRNHHCLHPFPTHSPQQHKKLKPPPAVTATQFHRSSN 60

Query: 61  SLRTRSDRWSSTQSKLAEPEQVSVGCFSSPLPNRKASKIVNRKPEPDYASELETLPRWSV 120
           SLRTRSDRWSS+QSKLAEPEQVSVGCFSSPLPNRKA+KI+NRKPEPD ASELETLPRWS+
Sbjct: 61  SLRTRSDRWSSSQSKLAEPEQVSVGCFSSPLPNRKATKILNRKPEPDCASELETLPRWSL 120

Query: 121 SSKKSISPFRNSVSS----SSLSSYQSSPLKT 149
           SSKKSISPFRNSVSS    SSLSSYQSSP  T
Sbjct: 121 SSKKSISPFRNSVSSSPSPSSLSSYQSSPRPT 152

[Close]

BLAST of CmoCh01G014270 vs. NCBI nr
Match: XP_038899347.1 (uncharacterized protein LOC120086669 [Benincasa hispida])

HSP 1 Score: 193.7 bits (491), Expect = 1.5e-45
Identity = 107/155 (69.03%), Postives = 121/155 (78.06%), Query Frame = 0


Query: 1   MDVDEFYRQPAAVPFKWEIKPGVPRNHHRLHQFPTHS-PQQHKKLKPPPAVTATQFHRSS 60
           MDVDEFYRQPAAVPFKWEIKPGVP+NHHRL   PTHS PQ H+KLKPPP+V  + F   S
Sbjct: 1   MDVDEFYRQPAAVPFKWEIKPGVPKNHHRLRHSPTHSPPQHHQKLKPPPSV--SNFLHPS 60

Query: 61  NSL----RTRSDRWSSTQSKLAEPEQVSVGCFSSPLPNRKASKIVNRKPEPDYASELETL 120
           NSL    RTRSDRW     + ++PEQVS GCF SPLPNRK++K ++R PEPDY+S LE+L
Sbjct: 61  NSLHSSSRTRSDRW-----RFSQPEQVSSGCFPSPLPNRKSAKSLSRNPEPDYSSGLESL 120

Query: 121 PRWSVSSKKSISPFRNSVSS--SSLSSYQSSPLKT 149
            RWSVSS+KSISPFR SVSS  SS SSY SSP  T
Sbjct: 121 SRWSVSSRKSISPFRYSVSSSPSSYSSYHSSPRPT 148

[Close]

BLAST of CmoCh01G014270 vs. TAIR 10
Match: AT1G77400.1 (CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF688 (InterPro:IPR007789); BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT1G21695.1); Has 328 Blast hits to 314 proteins in 61 species: Archae - 0; Bacteria - 12; Metazoa - 130; Fungi - 28; Plants - 92; Viruses - 10; Other Eukaryotes - 56 (source: NCBI BLink). )

HSP 1 Score: 51.6 bits (122), Expect = 8.4e-07
Identity = 60/218 (27.52%), Postives = 84/218 (38.53%), Query Frame = 0


Query: 1   MDVDEFYRQPAAVPFKWEIKPGVPRNHHRLHQFPTHSP-QQHKKLKP------------- 60
           +DVD+ +++P  +PF WEI+PGVP+   R+ Q    +P Q  KKL P             
Sbjct: 4   IDVDDSFKRPGTIPFSWEIRPGVPKT--RMSQPGNTTPLQPPKKLSPLRFKPLSHSQPLL 63

Query: 61  PPAVTATQFHRSSNSL------------------------------------------RT 120
           PPA++       SNS                                           R 
Sbjct: 64  PPALSPPSSSFISNSKSRPLSPLTPHSFSTTPSKLKPPRTPSSLSGFYSPGPSFRSSPRA 123

Query: 121 RSDRWSSTQSKLAEPEQ----------VSVGCFSSP---LPNRKAS----KIVNRKPEPD 146
            S+RW   +     PE              GCF SP   L   K+     K  +R     
Sbjct: 124 FSERWQLHRPNRIRPESEPEPSSDFSVAGFGCFPSPKFRLRKVKSGGSRRKSGSRSENDY 183

[Close]

BLAST of CmoCh01G014270 vs. TAIR 10
Match: AT1G21695.1 (hydroxyproline-rich glycoprotein family protein )

HSP 1 Score: 44.7 bits (104), Expect = 1.0e-04
Identity = 34/107 (31.78%), Postives = 48/107 (44.86%), Query Frame = 0


Query: 1   MDVDEFYRQPAAVPFKWEIKPGVPRNHHRLHQFPTHSPQQHKKLKP------PPAVTATQ 60
           +D D+ +++P AVPFKWEI+PGVP+            P    KL P      PP+ + + 
Sbjct: 2   VDGDDSFKRPGAVPFKWEIRPGVPKTRPGDDDPALLQPPPPNKLPPLKLKSTPPSNSPSP 61

Query: 61  FHRSSNSLRTRSDRWS----STQSKLAEPEQVSVGCFSSPLPNRKAS 98
              SS    +RS   S        KL  P      C +SP P  ++S
Sbjct: 62  SSSSSFFSESRSRPVSPFAPPPSFKLKSPSDSDSNCSASPTPYFRSS 108

The following BLAST results are available for this feature:

BLAST of CmoCh01G014270 vs.


Match Name	E-value	Identity	Description

BLAST of CmoCh01G014270 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FHC7	1.9e-75	98.65	uncharacterized protein LOC111445775 OS=Cucurbita moschata OX=3662 GN=LOC1114457...	[more]
A0A6J1ISY3	1.6e-69	91.45	uncharacterized protein LOC111480325 OS=Cucurbita maxima OX=3661 GN=LOC111480325...	[more]
A0A1S3BAM4	9.6e-43	68.55	uncharacterized protein LOC103487607 OS=Cucumis melo OX=3656 GN=LOC103487607 PE=...	[more]
A0A6J1BQH3	4.8e-42	65.63	uncharacterized protein DKFZp434B061-like OS=Momordica charantia OX=3673 GN=LOC1...	[more]
A0A0A0KY52	6.5e-31	65.60	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G361790 PE=4 SV=1	[more]

BLAST of CmoCh01G014270 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022940016.1	4.0e-75	98.65	uncharacterized protein LOC111445775 [Cucurbita moschata]	[more]
XP_023525665.1	1.0e-70	93.38	uncharacterized protein LOC111789202 [Cucurbita pepo subsp. pepo]	[more]
KAG6608039.1	1.3e-70	94.04	hypothetical protein SDJN03_01381, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022981067.1	3.3e-69	91.45	uncharacterized protein LOC111480325 [Cucurbita maxima]	[more]
XP_038899347.1	1.5e-45	69.03	uncharacterized protein LOC120086669 [Benincasa hispida]	[more]

BLAST of CmoCh01G014270 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G77400.1	8.4e-07	27.52	CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF688 (InterPro:IPR0077...	[more]
AT1G21695.1	1.0e-04	31.78	hydroxyproline-rich glycoprotein family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 52..79
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 26..102
None	No IPR available	PANTHER	PTHR35466	SERINE/ARGININE REPETITIVE MATRIX PROTEIN 1	coord: 1..148
None	No IPR available	PANTHER	PTHR35466:SF4	SERINE/ARGININE REPETITIVE MATRIX PROTEIN 1	coord: 1..148

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh01G014270.1	CmoCh01G014270.1	mRNA