CmoCh01G013830 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh01G013830
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionDEAD-box ATP-dependent RNA helicase
LocationCmo_Chr01: 10888098 .. 10892038 (+)
RNA-Seq ExpressionCmoCh01G013830
SyntenyCmoCh01G013830
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GCCTCCATTTACTCGGGAGTCCGGTAGTACTAAAGCCCCTTTCACTCTGCGATATTCTTCTTAAACCCTAGCCAGTTCCATTACCCATCATTTCTCTCTTCACTTCTTCCACGAACTCTTTGAGCAGCTCTGTTAGTGTAATTCGTGCTCAAAGACGATGATGAGTTCAGTTCTTCTACGGAGATCCGCTGCCTTAGCGGCCTCCAGAGGTAGAGTTAGTTCTACCTTCTTAGCCCCAATCGCGAACTTTTTAACGTCTTCTGTGGATGTTAATGGCGGTGCTGTACCTGCTGCTGAGTTCGGACGTTTCTCCACTACTGGGGTGACGGAGAGAGCTTTGGGTTTTGGTTTTCAATCGATGGGATTTCACTCGGCTTCTGGGCCGTTGGGTTTTAAGTCGTCGTTGGTTTCCCGGGCGGAGTTTGCGGTGGAGGAATACGATGATGCTAGCAGTAGTAAAAGCGGTGATGACGGACTCGAGATTGGCAGTCTCGGGATCGCGCCGGAGATTGTTTCTGCTTTGGCGAAAAAGGGTATAACGAAGCTCTTCCCTATTCAGGTACTGTTTTTTTTTTCTCTCTCATTTATTTCATGATTACCAGTTTTTGCTGTTGGGGTTGAACAACATGGGCGAGTCGTGGAGAAATTTTTGAAAATTAGTTTCGACGATTTTGATCGCTTCTTCAAACTACTGCTTGTTTATATCCGCCCTAACTCACCCCAGCTTGGACGTTGAATTACGGCGATGAAGTTACGGTTATATTTTTTAGGAACCAATTTCATTTGTTTTGAGAGCTAGAGGCCATGTTCCTTATTTCGACACCTTTTGGCCGTACGTGTGGTACCTGTATTGCGGAATGTGCCTATCGTTCATATTCCTCAGTCGAATAATGCATATGTTTTGATTTCGGCTTATAATAGTTCCGTTTGGGTTGTTTCGAGATTCGTGTTTCATTTTCCATTGGGGTTTAAAAGTATGCTGTTTCTCAATCTTTTTCAGAGAGCCGTGCTAGAACCAGCCATGCAAGGCCGTGACATGATTGGTCGTGCTAGAACTGGAACAGGAAAAACTCTTGCTTTTGGAATACCCATCTTGGATAAAATCATTCAGTTCAATGCGAAACACGGGTTTGTGTTTCAACCTTGGTCATTTTTCTTCCAATTAGCTTAGTTTCTGTTTAATTCGTTATCTGGGAAGGGTTTGAATGGGTATTCTTTAAATTTTAAAAAATCATAATTCTTTAGAAATTATGCAGAAGAGGAAGGTACCCGTTGGCCCTGGTTCTAGCTCCAACAAGGGAACTTGCTCGGCAGGTTGAAAAAGAGTTTCAAGAGGCTGCACCTAATTTGGACACAATATGTGTTTATGGAGGGGCACCAATTTCACGCCAAATGAGGCAGCTTGACTATGGCGTTGACATAGCTGTTGGCACACCTGGTCGCTTGATTGATCTTCTCAATAGGGGTTCGCTTAATTTATCAGAAGTCCAGTTTGTTGTTCTCGATGAAGCAGATCAGATGCTTCAAGTAGGCTTTCAAGAGGATGTTGAGAAGATCTTGGAGAGGTTGCCTCAGAAACGTCAGACTATGATGTTCTCTGCAACAATGCCATCTTGGATCAGAAAACTCACTCAAAATTACCTAACCAATCCATTAACTATTGATCTTGTGAGTATGTTGGCTACTTAATATCTTTTCTACTTCTTGGAATCTAATAATATCAACTGAAGCATTTTTCTAAAAAATTATATCACTGACAACACAACCATCAAATTAGTGGACTCAGAAACTGAAGGTGCACATGATATTTTAAATAATTGAAACTGCTCTTGCTAATCAAAATCACTATTCAATTGTCTCATGAAGTTCGGTTGGAGGATTGGAAGTTTGACAAAACTTATCAATATTTCAGGTTGGAGATTCTGATCAGAAATTGGCAGATGGAATTAGCCTATTTTCAATTGTTTCAGATATGCGTGGAAAAGCATCAATAATTGGACCTCTGATAACAGTATGGTTGCATAGCTTCTGTTTTCCCCCCTTTGATTTCTGCAAAGCCATATTTTACCTGGTTCTATCATTTCATGTTGCTTGTTGAATGCTTGCTTTCATCATGCTGTTGCCAATGATTATCTGCTTTGTAGGAACATGCAAAAGGAGGAAAGTGTATTGTTTTCACTCAAACGAAACGTGATGCTGATAGATTAGCCTATGCAATGGCAAGGAACTTCAGATGTGAAGCTTTGCATGGAGATATTTCACAGTCTCAGAGAGAAAGAACTCTTTCTGGTTTTAGAGACGGACATTTCAACGTTTTAGTTGCAACTGATGTTGCAGCAAGGGGTCTTGATATACCCAATGTTGATCTTGTAAGTGATAATCTTCCTCTATATTTTTTTCATCTTTTATCTTGTTTTATAGCACATAGTCTCTGGTTGCATGGTGAACCATTAAATTTTTTCTTGTCAATAATATACCTTACTCTTAACTTTGAAAACAAACTAGGGCAGTGTAATAGTAGTACCAGACTCTATCATCTCTCTTCCTCTTGTGCTGTTGGGAGCCTAGGAGGAAGTGGTTTGAAGGGTGAGGGAGTCTTTCGTCTGTATAGCCATTAAGATCCCATGGATTCTTTCTGACCTTGATTTTTTATTAGGTAATACATTTTGAGCTTCCAAACAACACAGAGATATTTGTCCATAGATCAGGACGTACAGGTCGTGCTGGCAAGAAAGGTAGTGCTATTCTTATTTACTCGCAGGATCAGTCAAGGGCTGTCAGGATGATTGAGCGTGAAGTAGGCTGCAGATTTAATGAGGTTAGGATCTCTCTTCAGCATACCAATCACTGTAGGGTGCTGTAATTAGAACAATCGACTTCTCTAGTATCCTCCGATCTCAGAAATTTACGAGTTAATATTAGTCCACCTTGGAGTATATTACTACTTGATGTAAAGTTGACACTGATTGCTTTGTTCTTGATTATCAGCTTCCGAAGATCTCTGTTGAGAGTGGTGCTCATGTCGATATGTTCAGTGGTGGTGGTCAATTTAGTTCTTTTGGAGGAGGAGGATTCAGGGATCGTCGAATGAATGATTCAGGCCGTTTTGGTGGTCAAAGAGGTCCAAGTTTTGGTCGTTCGGCAGGTTATGAAAATTCAGGTTTTAGACGTTCCGGTGGCAGGGATTCTTTTGGGCAAGGGGGCAGAAATAGTGAACCTAGCTCCGGCGGTGCAGGATCTTTTGGTAGTTTTGGTTCTGGTCGTTCTGGTGGGTTTGGAGACTTCGGCAGTTCTAGTCGATCCGGTGGCTTCGGGGATTTCGGTGGTTCAGGTCGTAGTTCAGGATTTGGTGACAGAAATTCTAAAAACTCTGGCTTATTTGGTGACATGGATGCGGATCAGAGAACTGGGAAAAGACAGTTCTGAACTAAATTGGTGAGTGCCGATGTTTATAACGGTCGTTTCCAGTTTTTCGATCTGAAGAAGGTGACAATTATGTGAAGGATGAAAGATTATTTCATATGTTCAGTTTAGATTCTCTGATTTTGCTAGCTTTCATTTCGTGCAGGGAAACACAACAACATCACGGGGAAATAATATTGCCATGGATTAATGACAGAATTCTTTTGAAGCAAGATTATACGAGGGGATTTTGAGGTAGGGCCCTGAACATGTTCATCGTTTCTTATATTTTCTATTACGCATTGAAATCTTTATGTAGTTGATACAAGACAAATGTTGTAGCCACTTTGAAGGAAAACTAACCTCAATATTTGGGATCAGTTCCTATGGTCTTATGTATAAATCGTTTTTGATATGCCATAATAGTTGTATTCTATTATATCCCTCTTTCTTAAACCATGTATCACCATTCTTGTTCATTGGGATAGTTTATGGCTTATAATCGACTGCTTTTTTCTGAAGTATCTACGAGACACAAG

mRNA sequence

GCCTCCATTTACTCGGGAGTCCGGTAGTACTAAAGCCCCTTTCACTCTGCGATATTCTTCTTAAACCCTAGCCAGTTCCATTACCCATCATTTCTCTCTTCACTTCTTCCACGAACTCTTTGAGCAGCTCTGTTAGTGTAATTCGTGCTCAAAGACGATGATGAGTTCAGTTCTTCTACGGAGATCCGCTGCCTTAGCGGCCTCCAGAGGTAGAGTTAGTTCTACCTTCTTAGCCCCAATCGCGAACTTTTTAACGTCTTCTGTGGATGTTAATGGCGGTGCTGTACCTGCTGCTGAGTTCGGACGTTTCTCCACTACTGGGGTGACGGAGAGAGCTTTGGGTTTTGGTTTTCAATCGATGGGATTTCACTCGGCTTCTGGGCCGTTGGGTTTTAAGTCGTCGTTGGTTTCCCGGGCGGAGTTTGCGGTGGAGGAATACGATGATGCTAGCAGTAGTAAAAGCGGTGATGACGGACTCGAGATTGGCAGTCTCGGGATCGCGCCGGAGATTGTTTCTGCTTTGGCGAAAAAGGGTATAACGAAGCTCTTCCCTATTCAGAGAGCCGTGCTAGAACCAGCCATGCAAGGCCGTGACATGATTGGTCGTGCTAGAACTGGAACAGGAAAAACTCTTGCTTTTGGAATACCCATCTTGGATAAAATCATTCAGTTCAATGCGAAACACGGAAGAGGAAGGTACCCGTTGGCCCTGGTTCTAGCTCCAACAAGGGAACTTGCTCGGCAGGTTGAAAAAGAGTTTCAAGAGGCTGCACCTAATTTGGACACAATATGTGTTTATGGAGGGGCACCAATTTCACGCCAAATGAGGCAGCTTGACTATGGCGTTGACATAGCTGTTGGCACACCTGGTCGCTTGATTGATCTTCTCAATAGGGGTTCGCTTAATTTATCAGAAGTCCAGTTTGTTGTTCTCGATGAAGCAGATCAGATGCTTCAAGTAGGCTTTCAAGAGGATGTTGAGAAGATCTTGGAGAGGTTGCCTCAGAAACGTCAGACTATGATGTTCTCTGCAACAATGCCATCTTGGATCAGAAAACTCACTCAAAATTACCTAACCAATCCATTAACTATTGATCTTGTTGGAGATTCTGATCAGAAATTGGCAGATGGAATTAGCCTATTTTCAATTGTTTCAGATATGCGTGGAAAAGCATCAATAATTGGACCTCTGATAACAGAACATGCAAAAGGAGGAAAGTGTATTGTTTTCACTCAAACGAAACGTGATGCTGATAGATTAGCCTATGCAATGGCAAGGAACTTCAGATGTGAAGCTTTGCATGGAGATATTTCACAGTCTCAGAGAGAAAGAACTCTTTCTGGTTTTAGAGACGGACATTTCAACGTTTTAGTTGCAACTGATGTTGCAGCAAGGGGTCTTGATATACCCAATGTTGATCTTGTAATACATTTTGAGCTTCCAAACAACACAGAGATATTTGTCCATAGATCAGGACGTACAGGTCGTGCTGGCAAGAAAGGTAGTGCTATTCTTATTTACTCGCAGGATCAGTCAAGGGCTGTCAGGATGATTGAGCGTGAAGTAGGCTGCAGATTTAATGAGCTTCCGAAGATCTCTGTTGAGAGTGGTGCTCATGTCGATATGTTCAGTGGTGGTGGTCAATTTAGTTCTTTTGGAGGAGGAGGATTCAGGGATCGTCGAATGAATGATTCAGGCCGTTTTGGTGGTCAAAGAGGTCCAAGTTTTGGTCGTTCGGCAGGTTATGAAAATTCAGGTTTTAGACGTTCCGGTGGCAGGGATTCTTTTGGGCAAGGGGGCAGAAATAGTGAACCTAGCTCCGGCGGTGCAGGATCTTTTGGTAGTTTTGGTTCTGGTCGTTCTGGTGGGTTTGGAGACTTCGGCAGTTCTAGTCGATCCGGTGGCTTCGGGGATTTCGGTGGTTCAGGTCGTAGTTCAGGATTTGGTGACAGAAATTCTAAAAACTCTGGCTTATTTGGTGACATGGATGCGGATCAGAGAACTGGGAAAAGACAGTTCTGAACTAAATTGCTTTCATTTCGTGCAGGGAAACACAACAACATCACGGGGAAATAATATTGCCATGGATTAATGACAGAATTCTTTTGAAGCAAGATTATACGAGGGGATTTTGAGGTAGGGCCCTGAACATGTTCATCGTTTCTTATATTTTCTATTACGCATTGAAATCTTTATGTAGTTGATACAAGACAAATGTTGTAGCCACTTTGAAGGAAAACTAACCTCAATATTTGGGATCAGTTCCTATGGTCTTATGTATAAATCGTTTTTGATATGCCATAATAGTTGTATTCTATTATATCCCTCTTTCTTAAACCATGTATCACCATTCTTGTTCATTGGGATAGTTTATGGCTTATAATCGACTGCTTTTTTCTGAAGTATCTACGAGACACAAG

Coding sequence (CDS)

ATGATGAGTTCAGTTCTTCTACGGAGATCCGCTGCCTTAGCGGCCTCCAGAGGTAGAGTTAGTTCTACCTTCTTAGCCCCAATCGCGAACTTTTTAACGTCTTCTGTGGATGTTAATGGCGGTGCTGTACCTGCTGCTGAGTTCGGACGTTTCTCCACTACTGGGGTGACGGAGAGAGCTTTGGGTTTTGGTTTTCAATCGATGGGATTTCACTCGGCTTCTGGGCCGTTGGGTTTTAAGTCGTCGTTGGTTTCCCGGGCGGAGTTTGCGGTGGAGGAATACGATGATGCTAGCAGTAGTAAAAGCGGTGATGACGGACTCGAGATTGGCAGTCTCGGGATCGCGCCGGAGATTGTTTCTGCTTTGGCGAAAAAGGGTATAACGAAGCTCTTCCCTATTCAGAGAGCCGTGCTAGAACCAGCCATGCAAGGCCGTGACATGATTGGTCGTGCTAGAACTGGAACAGGAAAAACTCTTGCTTTTGGAATACCCATCTTGGATAAAATCATTCAGTTCAATGCGAAACACGGAAGAGGAAGGTACCCGTTGGCCCTGGTTCTAGCTCCAACAAGGGAACTTGCTCGGCAGGTTGAAAAAGAGTTTCAAGAGGCTGCACCTAATTTGGACACAATATGTGTTTATGGAGGGGCACCAATTTCACGCCAAATGAGGCAGCTTGACTATGGCGTTGACATAGCTGTTGGCACACCTGGTCGCTTGATTGATCTTCTCAATAGGGGTTCGCTTAATTTATCAGAAGTCCAGTTTGTTGTTCTCGATGAAGCAGATCAGATGCTTCAAGTAGGCTTTCAAGAGGATGTTGAGAAGATCTTGGAGAGGTTGCCTCAGAAACGTCAGACTATGATGTTCTCTGCAACAATGCCATCTTGGATCAGAAAACTCACTCAAAATTACCTAACCAATCCATTAACTATTGATCTTGTTGGAGATTCTGATCAGAAATTGGCAGATGGAATTAGCCTATTTTCAATTGTTTCAGATATGCGTGGAAAAGCATCAATAATTGGACCTCTGATAACAGAACATGCAAAAGGAGGAAAGTGTATTGTTTTCACTCAAACGAAACGTGATGCTGATAGATTAGCCTATGCAATGGCAAGGAACTTCAGATGTGAAGCTTTGCATGGAGATATTTCACAGTCTCAGAGAGAAAGAACTCTTTCTGGTTTTAGAGACGGACATTTCAACGTTTTAGTTGCAACTGATGTTGCAGCAAGGGGTCTTGATATACCCAATGTTGATCTTGTAATACATTTTGAGCTTCCAAACAACACAGAGATATTTGTCCATAGATCAGGACGTACAGGTCGTGCTGGCAAGAAAGGTAGTGCTATTCTTATTTACTCGCAGGATCAGTCAAGGGCTGTCAGGATGATTGAGCGTGAAGTAGGCTGCAGATTTAATGAGCTTCCGAAGATCTCTGTTGAGAGTGGTGCTCATGTCGATATGTTCAGTGGTGGTGGTCAATTTAGTTCTTTTGGAGGAGGAGGATTCAGGGATCGTCGAATGAATGATTCAGGCCGTTTTGGTGGTCAAAGAGGTCCAAGTTTTGGTCGTTCGGCAGGTTATGAAAATTCAGGTTTTAGACGTTCCGGTGGCAGGGATTCTTTTGGGCAAGGGGGCAGAAATAGTGAACCTAGCTCCGGCGGTGCAGGATCTTTTGGTAGTTTTGGTTCTGGTCGTTCTGGTGGGTTTGGAGACTTCGGCAGTTCTAGTCGATCCGGTGGCTTCGGGGATTTCGGTGGTTCAGGTCGTAGTTCAGGATTTGGTGACAGAAATTCTAAAAACTCTGGCTTATTTGGTGACATGGATGCGGATCAGAGAACTGGGAAAAGACAGTTCTGA

Protein sequence

MMSSVLLRRSAALAASRGRVSSTFLAPIANFLTSSVDVNGGAVPAAEFGRFSTTGVTERALGFGFQSMGFHSASGPLGFKSSLVSRAEFAVEEYDDASSSKSGDDGLEIGSLGIAPEIVSALAKKGITKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKIIQFNAKHGRGRYPLALVLAPTRELARQVEKEFQEAAPNLDTICVYGGAPISRQMRQLDYGVDIAVGTPGRLIDLLNRGSLNLSEVQFVVLDEADQMLQVGFQEDVEKILERLPQKRQTMMFSATMPSWIRKLTQNYLTNPLTIDLVGDSDQKLADGISLFSIVSDMRGKASIIGPLITEHAKGGKCIVFTQTKRDADRLAYAMARNFRCEALHGDISQSQRERTLSGFRDGHFNVLVATDVAARGLDIPNVDLVIHFELPNNTEIFVHRSGRTGRAGKKGSAILIYSQDQSRAVRMIEREVGCRFNELPKISVESGAHVDMFSGGGQFSSFGGGGFRDRRMNDSGRFGGQRGPSFGRSAGYENSGFRRSGGRDSFGQGGRNSEPSSGGAGSFGSFGSGRSGGFGDFGSSSRSGGFGDFGGSGRSSGFGDRNSKNSGLFGDMDADQRTGKRQF
Homology
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BLAST of CmoCh01G013830 vs. ExPASy Swiss-Prot
Match: Q9LUW5 (DEAD-box ATP-dependent RNA helicase 53, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=RH53 PE=1 SV=1)

HSP 1 Score: 702.2 bits (1811), Expect = 5.2e-201
Identity = 401/620 (64.68%), Postives = 468/620 (75.48%), Query Frame = 0 

Query: 2   MSSVLLRRSAALAASRGRVSSTFLAPIANFLTSSVDVNGGAVPAAEFGRFSTTGVTERAL 61
           M + +LRRS  L AS+  +S++  +       ++V  +  A  A      +  G ++   
Sbjct: 1   MITTVLRRS-LLDASKRNLSASLTS------INTVLFHNLAPAATRVSDLALIGSSDVKA 60

Query: 62  G--FGFQSMGFHSASGPLGFKSSLVSRAEFAVEEYDD---ASSSKSGDDGLEIGSLGIAP 121
           G  FG ++ G H  SGPL F++S+VS+A FA+ E  +     S   G DGL I  LGI+P
Sbjct: 61  GFPFGVEAKGIHFQSGPLDFRASMVSQAGFAISESSERRVGDSESVGGDGLAISELGISP 120

Query: 122 EIVSALAKKGITKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKIIQFNAKH 181
           EIV AL+ KGI KLFPIQ+AVLEPAM+GRDMIGRARTGTGKTLAFGIPI+DKII++NAKH
Sbjct: 121 EIVKALSSKGIEKLFPIQKAVLEPAMEGRDMIGRARTGTGKTLAFGIPIIDKIIKYNAKH 180

Query: 182 GRGRYPLALVLAPTRELARQVEKEFQEAAPNLDTICVYGGAPISRQMRQLDYGVDIAVGT 241
           GRGR PL LVLAPTRELARQVEKEF+E+AP+LDTIC+YGG PI +QMRQLDYGVD+AVGT
Sbjct: 181 GRGRNPLCLVLAPTRELARQVEKEFRESAPSLDTICLYGGTPIGQQMRQLDYGVDVAVGT 240

Query: 242 PGRLIDLLNRGSLNLSEVQFVVLDEADQMLQVGFQEDVEKILERLPQKRQTMMFSATMPS 301
           PGR+IDL+ RG+LNLSEVQFVVLDEADQMLQVGF EDVE ILE+LP+KRQ+MMFSATMPS
Sbjct: 241 PGRVIDLMKRGALNLSEVQFVVLDEADQMLQVGFAEDVEIILEKLPEKRQSMMFSATMPS 300

Query: 302 WIRKLTQNYLTNPLTIDLVGDSDQKLADGISLFSIVSDMRGKASIIGPLITEHAKGGKCI 361
           WIR LT+ YL NPLT+DLVGDSDQKLADGI+ +SI++D  G+ASIIGPL+TEHAKGGKCI
Sbjct: 301 WIRSLTKKYLNNPLTVDLVGDSDQKLADGITTYSIIADSYGRASIIGPLVTEHAKGGKCI 360

Query: 362 VFTQTKRDADRLAYAMARNFRCEALHGDISQSQRERTLSGFRDGHFNVLVATDVAARGLD 421
           VFTQTKRDADRL+YA+AR+F+CEALHGDISQSQRERTL+GFRDGHFN+LVATDVAARGLD
Sbjct: 361 VFTQTKRDADRLSYALARSFKCEALHGDISQSQRERTLAGFRDGHFNILVATDVAARGLD 420

Query: 422 IPNVDLVIHFELPNNTEIFVHRSGRTGRAGKKGSAILIYSQDQSRAVRMIEREVGCRFNE 481
           +PNVDL+IH+ELPNNTE FVHR+GRTGRAGKKGSAILIYSQDQSRAV++IEREVG RF E
Sbjct: 421 VPNVDLIIHYELPNNTETFVHRTGRTGRAGKKGSAILIYSQDQSRAVKIIEREVGSRFTE 480

Query: 482 LPKISVESGAHVDMFSG-GGQFSSFGGGGFRDRRMNDSGRFGG------QRGPSFGRSAG 541
           LP I+VE G+   MF G G +     GGG RDR  +  GR GG        G   GRS G
Sbjct: 481 LPSIAVERGS-ASMFEGIGSRSGGSFGGGMRDRGSSFGGRSGGGGYGGSSGGYGGGRSGG 540

Query: 542 YEN--------SGFRRSGGRDSFGQGGRNSEPSSG----GAGSFGSFGSGRSGGFGDFGS 596
             N        SGF   G R   G G   S  S G    G G  G   + RS GFGDFGS
Sbjct: 541 SSNRYSGDSDRSGFGSFGMRSPEGYGSDRSSQSGGRSSFGGGRSGGSSNNRSSGFGDFGS 600

[Close]
BLAST of CmoCh01G013830 vs. ExPASy Swiss-Prot
Match: Q9LUW6 (DEAD-box ATP-dependent RNA helicase 9, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=RH9 PE=1 SV=1)

HSP 1 Score: 674.9 bits (1740), Expect = 8.9e-193
Identity = 390/628 (62.10%), Postives = 458/628 (72.93%), Query Frame = 0 

Query: 2   MSSVLLRRS------AALAASRGRVSSTFLAPIANFLTSSVDVNGGAVPAAEFGRFSTTG 61
           M S +LRRS        LAAS   +++     +A    +  D+  GA         +   
Sbjct: 1   MISTVLRRSILGTSRRTLAASVTSINAALFHNLAPAAATVSDLANGAT--------NVKS 60

Query: 62  VTERALGFGFQSMGFHSASGPLGFKSSLVSRAEFAVEEY------------DDASSSKSG 121
           +   +  FG +   FH  S P  F+SS+VS A FA +EY             ++  S  G
Sbjct: 61  LPSNSSPFGVKVRDFHVKSVPSEFRSSIVSSAGFAAQEYAPSYENDGGIGDSESVGSSGG 120

Query: 122 DDGLEIGSLGIAPEIVSALAKKGITKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGI 181
            DGL I  LGI+PEIV AL  +GI KLFPIQ+AVLEPAM+GRDMIGRARTGTGKTLAFGI
Sbjct: 121 GDGLAIADLGISPEIVKALKGRGIEKLFPIQKAVLEPAMEGRDMIGRARTGTGKTLAFGI 180

Query: 182 PILDKIIQFNAKHGRGRYPLALVLAPTRELARQVEKEFQEAAPNLDTICVYGGAPISRQM 241
           PI+DKII+FNAKHGRG+ P  LVLAPTRELARQVEKEF+E+AP+LDTIC+YGG PI +QM
Sbjct: 181 PIIDKIIKFNAKHGRGKNPQCLVLAPTRELARQVEKEFRESAPSLDTICLYGGTPIGQQM 240

Query: 242 RQLDYGVDIAVGTPGRLIDLLNRGSLNLSEVQFVVLDEADQMLQVGFQEDVEKILERLPQ 301
           R+L+YG+D+AVGTPGR+IDL+ RG+LNLSEVQFVVLDEADQMLQVGF EDVE IL++LP 
Sbjct: 241 RELNYGIDVAVGTPGRIIDLMKRGALNLSEVQFVVLDEADQMLQVGFAEDVEIILQKLPA 300

Query: 302 KRQTMMFSATMPSWIRKLTQNYLTNPLTIDLVGDSDQKLADGISLFSIVSDMRGKASIIG 361
           KRQ+MMFSATMPSWIR LT+ YL NPLTIDLVGDSDQKLADGI+++SI +D  G+ASIIG
Sbjct: 301 KRQSMMFSATMPSWIRSLTKKYLNNPLTIDLVGDSDQKLADGITMYSIAADSYGRASIIG 360

Query: 362 PLITEHAKGGKCIVFTQTKRDADRLAYAMARNFRCEALHGDISQSQRERTLSGFRDGHFN 421
           PL+ EH KGGKCIVFTQTKRDADRLA+ +A++++CEALHGDISQ+QRERTL+GFRDG+F+
Sbjct: 361 PLVKEHGKGGKCIVFTQTKRDADRLAFGLAKSYKCEALHGDISQAQRERTLAGFRDGNFS 420

Query: 422 VLVATDVAARGLDIPNVDLVIHFELPNNTEIFVHRSGRTGRAGKKGSAILIYSQDQSRAV 481
           +LVATDVAARGLD+PNVDLVIH+ELPNNTE FVHR+GRTGRAGKKGSAILI+ QDQ+RAV
Sbjct: 421 ILVATDVAARGLDVPNVDLVIHYELPNNTETFVHRTGRTGRAGKKGSAILIHGQDQTRAV 480

Query: 482 RMIEREVGCRFNELPKISVESGAHVDMFSGGGQFS--SFGGGGFRDRRMNDSGRFGGQRG 541
           +MIE+EVG RFNELP I+VE G+   MF G G  S  SFGGG          G   G  G
Sbjct: 481 KMIEKEVGSRFNELPSIAVERGS-ASMFEGVGARSGGSFGGG-------RSGGGGYGSYG 540

Query: 542 PSFGRSAGYENSGFRRSGGRDSFGQGGRNSEPSSGGAGSFGSFGSGRSGGFGDFGSSSRS 601
            S GRS G    G+  S GR     GG  S   SGG+ S  S GS RS GFG FGS   S
Sbjct: 541 SSSGRSGGGSYGGYGGSSGRSG---GGGGSYGGSGGSSSRYSGGSDRSSGFGSFGSGGSS 600

Query: 602 GGFG---DFGGSGRSS--GFGDRNSKNS 605
           GGFG       SGRSS  GFG  + K S
Sbjct: 601 GGFGSDRSSQSSGRSSFGGFGSNDGKRS 609

[Close]
BLAST of CmoCh01G013830 vs. ExPASy Swiss-Prot
Match: Q0ILZ4 (DEAD-box ATP-dependent RNA helicase 9 OS=Oryza sativa subsp. japonica OX=39947 GN=Os12g0611200 PE=2 SV=1)

HSP 1 Score: 636.3 bits (1640), Expect = 3.5e-181
Identity = 358/586 (61.09%), Postives = 440/586 (75.09%), Query Frame = 0 

Query: 70  FHSASGPLGFK----SSLVSRAEFAVEE----YDDASSSKSG-------DDGLEIGSLGI 129
           FHS+   LGF+    +   +R ++A +E     +D   +K+G       ++GLE+  LGI
Sbjct: 46  FHSSPAWLGFRETGAAGAAARPQYAADEGLFYEEDKRGAKAGGVAAGGAEEGLEVAKLGI 105

Query: 130 APEIVSALAKKGITKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKIIQFNA 189
           +P+IVS LA +GITKLFPIQRAVLEPAMQG+DM+GRA+TGTGKTLAFGIPILD II+ N 
Sbjct: 106 SPKIVSQLASRGITKLFPIQRAVLEPAMQGKDMVGRAKTGTGKTLAFGIPILDAIIRHNE 165

Query: 190 KHGRGRYPLALVLAPTRELARQVEKEFQEAAPNLDTICVYGGAPISRQMRQLDYGVDIAV 249
           K+  G++PLA+VLAPTRELA+QVE+EF +++ N++TICVYGG PIS+Q+RQL+YGVD+ +
Sbjct: 166 KNSPGKFPLAIVLAPTRELAKQVEREFSDSS-NVETICVYGGTPISQQIRQLNYGVDVVI 225

Query: 250 GTPGRLIDLLNRGSLNLSEVQFVVLDEADQMLQVGFQEDVEKILERLPQKRQTMMFSATM 309
           GTPGR+IDLL RG+LNLSEV+FVVLDEADQML VGF EDVE IL+R+P KRQT+MFSATM
Sbjct: 226 GTPGRVIDLLKRGALNLSEVRFVVLDEADQMLSVGFDEDVETILDRVPPKRQTLMFSATM 285

Query: 310 PSWIRKLTQNYLTNPLTIDLVGDSDQKLADGISLFSIVSDMRGKASIIGPLITEHAKGGK 369
           P+WI++LTQ YL NP+TIDLVG+ DQKLA+GISL+SI S+   K +++G LI EHAKGGK
Sbjct: 286 PTWIQRLTQKYLKNPVTIDLVGEDDQKLAEGISLYSIASEGHAKPAVLGELIKEHAKGGK 345

Query: 370 CIVFTQTKRDADRLAYAMARNFRCEALHGDISQSQRERTLSGFRDGHFNVLVATDVAARG 429
           CIVFTQTKRDADRL+Y M R+F+C+ALHGDI+Q+QRERTL GFR+GHFN+L+ATDVAARG
Sbjct: 346 CIVFTQTKRDADRLSYTMGRSFQCQALHGDITQAQRERTLKGFREGHFNILIATDVAARG 405

Query: 430 LDIPNVDLVIHFELPNNTEIFVHRSGRTGRAGKKGSAILIYSQDQSRAVRMIEREVGCRF 489
           LDIPNVDLVIHFELPN++E+FVHRSGRTGRAGKKG AI+++S  QSRA+RM+E +VGC+F
Sbjct: 406 LDIPNVDLVIHFELPNSSELFVHRSGRTGRAGKKGKAIVMHSYQQSRAIRMVENDVGCKF 465

Query: 490 NELPKISVESGAHVDMFSGGGQFSSFGGGGFRDRRMNDSGRFGGQRGPSFGRSAGYENSG 549
            ELPKI+VE     D+ SGG  F SFGGGGF        GR  G  G S  R  G+ +SG
Sbjct: 466 TELPKINVEGS---DLMSGG--FDSFGGGGFGREGGGSYGR-RGSFGSSSSRGGGFGDSG 525

Query: 550 FRRSG---GRDSFGQGGRNSEPSSG-------GAGSFGSFGSGRS--GGFGD--FGSS-- 609
           F RSG   GR   G  GR+S    G       G G FG  G GRS  GG+GD  FGSS  
Sbjct: 526 FGRSGGGFGRSGGGGFGRSSGGGFGDSGFGRSGGGGFGDSGFGRSGGGGYGDSGFGSSGG 585

Query: 610 -------SRSGGFGDFGGSGRSSGFGDRNSKNSGLFGDMDADQRTG 618
                   RSGGFGD G      GFG+  S + G FG  ++ Q  G
Sbjct: 586 GSGRSGFGRSGGFGDSGSGRFGGGFGNSGSGSFGNFGGNNSGQSGG 624

[Close]
BLAST of CmoCh01G013830 vs. ExPASy Swiss-Prot
Match: Q0D8N0 (DEAD-box ATP-dependent RNA helicase 53 OS=Oryza sativa subsp. japonica OX=39947 GN=Os07g0143700 PE=2 SV=2)

HSP 1 Score: 610.1 bits (1572), Expect = 2.7e-173
Identity = 368/633 (58.14%), Postives = 436/633 (68.88%), Query Frame = 0 

Query: 1   MMSSVLLRRSAALAASRGRVSSTFLAPIANFLTSSVD-VNGGAVPAAEFGRFSTTGVTER 60
           ++S  L   S++ AA RGR   + LA + +   S +D   G A P     R         
Sbjct: 4   LLSRALCAASSSPAAPRGR---SLLAALLSPSASPLDPCRGPAAPEPPRRR--------- 63

Query: 61  ALGFGFQSMGFHSASGPLGFKSSLVSRAEFAVEEYDDASSSKSGDDGLEIGSLGIAPEIV 120
                     FH +  PLGF+S+  S +        +A ++  GDDGLE+  LGI+P IV
Sbjct: 64  ---------AFHGSPSPLGFRSTPASWSS------PEAGAAVGGDDGLEVARLGISPWIV 123

Query: 121 SALAKKGITKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKIIQFNAKHGRG 180
             LA +GIT+LFPIQRAVL+PAMQG+DMIGRARTGTGKTLAFGIPI+D+I++ N K+G G
Sbjct: 124 ERLAARGITRLFPIQRAVLDPAMQGKDMIGRARTGTGKTLAFGIPIMDRILRHNEKNGSG 183

Query: 181 RYPLALVLAPTRELARQVEKEFQEAAPNLDTICVYGGAPISRQMRQLDYGVDIAVGTPGR 240
           R PLA++LAPTRELARQVEKEF+E+AP LD++CVYGG PIS QMR L+YGVD+ VGTPGR
Sbjct: 184 RNPLAIILAPTRELARQVEKEFKESAP-LDSLCVYGGVPISHQMRALNYGVDVVVGTPGR 243

Query: 241 LIDLLNRGSLNLSEVQFVVLDEADQMLQVGFQEDVEKILERLPQKRQTMMFSATMPSWIR 300
           +IDLL RG LNLSE+QFVVLDEADQML VGF EDVE I+E LPQ RQ+M+FSATMPSWIR
Sbjct: 244 IIDLLRRGVLNLSEIQFVVLDEADQMLAVGFDEDVEVIMENLPQNRQSMLFSATMPSWIR 303

Query: 301 KLTQNYLTNPLTIDLVGDSDQKLADGISLFSIVSDMRGKASIIGPLITEHAKGGKCIVFT 360
           K+T  YL +P+ IDLVGD DQKL +GISL+SI S+  GK SI+GPLI EHA GGKCIVFT
Sbjct: 304 KITSKYLKDPIIIDLVGDEDQKLPEGISLYSIASEHYGKPSILGPLIKEHANGGKCIVFT 363

Query: 361 QTKRDADRLAYAMARNFRCEALHGDISQSQRERTLSGFRDGHFNVLVATDVAARGLDIPN 420
           QTKR+ADRLAYAM R++ C+ALHGDISQ+QRERTLSGFRDG FN+LVATDVAARGLDIPN
Sbjct: 364 QTKREADRLAYAMGRSYACQALHGDISQNQRERTLSGFRDGRFNILVATDVAARGLDIPN 423

Query: 421 VDLVIHFELPNNTEIFVHRSGRTGRAGKKGSAILIYSQDQSRAVRMIEREVGCRFNELPK 480
           VDLVIH+ELPN +E+FVHRSGRT RAGKKGSAILIY+ DQ+RAVR+IE+++GC+F ELPK
Sbjct: 424 VDLVIHYELPNTSELFVHRSGRTARAGKKGSAILIYTNDQARAVRIIEQDIGCKFTELPK 483

Query: 481 ISVESGAHVDMF---------------SGGGQFSSFGGGGFRDRRMNDSGRFGGQRGPSF 540
           I V   A  DMF               +GG  F   G GGF + R    G F G  G S 
Sbjct: 484 IEVADEAS-DMFNVVRDNRSRLAGSPRTGGSSFGRGGYGGFGEGRSRGFGDFDG-FGSSP 543

Query: 541 GRSAGYENSGFRRSGGRDSFGQG----GRNSEPSSGGAGSFGSFGSG--------RSGGF 600
            R     ++G R   G   F +     GR+S     G G FG FG G        RS  F
Sbjct: 544 NRGGRSRDAGSRYGSGFGDFRRPSNAFGRSSSKQPDGFG-FGDFGEGNFSRNGNRRSRSF 602

[Close]
BLAST of CmoCh01G013830 vs. ExPASy Swiss-Prot
Match: Q0DM51 (DEAD-box ATP-dependent RNA helicase 3, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0827700 PE=2 SV=2)

HSP 1 Score: 486.5 bits (1251), Expect = 4.5e-136
Identity = 243/395 (61.52%), Postives = 306/395 (77.47%), Query Frame = 0 

Query: 92  EEYDDASSSKSGD-DGLEIGSLGIAPEIVSALAKKGITKLFPIQRAVLEPAMQGRDMIGR 151
           EE  +A     GD D L I  LG+  ++VS L K+GIT LFPIQRAVL PA+ GRD+I R
Sbjct: 88  EEGVEAVGGGEGDEDELAIARLGLPEQLVSTLEKRGITHLFPIQRAVLIPALDGRDLIAR 147

Query: 152 ARTGTGKTLAFGIPILDKIIQFNAKHG--RGRYPLALVLAPTRELARQVEKEFQEAAPNL 211
           A+TGTGKTLAFGIP++ ++++ +      RGR P  LVLAPTRELA+QVEKE +E+AP L
Sbjct: 148 AKTGTGKTLAFGIPMIKQLMEEDDGRSVRRGRIPRVLVLAPTRELAKQVEKEIKESAPKL 207

Query: 212 DTICVYGGAPISRQMRQLDYGVDIAVGTPGRLIDLLNRGSLNLSEVQFVVLDEADQMLQV 271
            T+CVYGG   + Q   L  GVD+ VGTPGR+IDL+N GSL L EV+++VLDEADQML V
Sbjct: 208 STVCVYGGVSYNVQQNALSRGVDVVVGTPGRIIDLINGGSLQLGEVKYLVLDEADQMLAV 267

Query: 272 GFQEDVEKILERLPQKRQTMMFSATMPSWIRKLTQNYLTNPLTIDLVGDSDQKLADGISL 331
           GF+EDVE IL++LP +RQ+M+FSATMP W++KL++ YL NPLTIDLVGD D+KLA+GI L
Sbjct: 268 GFEEDVETILQQLPAERQSMLFSATMPGWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKL 327

Query: 332 FSIVSDMRGKASIIGPLITEHAKGGKCIVFTQTKRDADRLAYAMARNFRCEALHGDISQS 391
           ++I      K +++  LIT +AKGGK IVFT+TKRDAD ++ A+  +   EALHGDISQ 
Sbjct: 328 YAIPLTSTSKRTVLSDLITVYAKGGKTIVFTKTKRDADEVSLALTNSIASEALHGDISQH 387

Query: 392 QRERTLSGFRDGHFNVLVATDVAARGLDIPNVDLVIHFELPNNTEIFVHRSGRTGRAGKK 451
           QRERTL+GFR G F VLVATDVAARGLDIPNVDL+IH+ELPN+ E FVHRSGRTGRAGK 
Sbjct: 388 QRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKA 447

Query: 452 GSAILIYSQDQSRAVRMIEREVGCRFNELPKISVE 484
           G+AIL+++  Q R VR +ER+VGCRF+ +   ++E
Sbjct: 448 GTAILMFTNSQRRTVRSLERDVGCRFDFISPPAIE 482

[Close]
BLAST of CmoCh01G013830 vs. ExPASy TrEMBL
Match: A0A6J1FJ02 (DEAD-box ATP-dependent RNA helicase 53, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111445803 PE=4 SV=1)

HSP 1 Score: 1180.2 bits (3052), Expect = 0.0e+00
Identity = 621/621 (100.00%), Postives = 621/621 (100.00%), Query Frame = 0 

Query: 1   MMSSVLLRRSAALAASRGRVSSTFLAPIANFLTSSVDVNGGAVPAAEFGRFSTTGVTERA 60
           MMSSVLLRRSAALAASRGRVSSTFLAPIANFLTSSVDVNGGAVPAAEFGRFSTTGVTERA
Sbjct: 1   MMSSVLLRRSAALAASRGRVSSTFLAPIANFLTSSVDVNGGAVPAAEFGRFSTTGVTERA 60

Query: 61  LGFGFQSMGFHSASGPLGFKSSLVSRAEFAVEEYDDASSSKSGDDGLEIGSLGIAPEIVS 120
           LGFGFQSMGFHSASGPLGFKSSLVSRAEFAVEEYDDASSSKSGDDGLEIGSLGIAPEIVS
Sbjct: 61  LGFGFQSMGFHSASGPLGFKSSLVSRAEFAVEEYDDASSSKSGDDGLEIGSLGIAPEIVS 120

Query: 121 ALAKKGITKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKIIQFNAKHGRGR 180
           ALAKKGITKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKIIQFNAKHGRGR
Sbjct: 121 ALAKKGITKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKIIQFNAKHGRGR 180

Query: 181 YPLALVLAPTRELARQVEKEFQEAAPNLDTICVYGGAPISRQMRQLDYGVDIAVGTPGRL 240
           YPLALVLAPTRELARQVEKEFQEAAPNLDTICVYGGAPISRQMRQLDYGVDIAVGTPGRL
Sbjct: 181 YPLALVLAPTRELARQVEKEFQEAAPNLDTICVYGGAPISRQMRQLDYGVDIAVGTPGRL 240

Query: 241 IDLLNRGSLNLSEVQFVVLDEADQMLQVGFQEDVEKILERLPQKRQTMMFSATMPSWIRK 300
           IDLLNRGSLNLSEVQFVVLDEADQMLQVGFQEDVEKILERLPQKRQTMMFSATMPSWIRK
Sbjct: 241 IDLLNRGSLNLSEVQFVVLDEADQMLQVGFQEDVEKILERLPQKRQTMMFSATMPSWIRK 300

Query: 301 LTQNYLTNPLTIDLVGDSDQKLADGISLFSIVSDMRGKASIIGPLITEHAKGGKCIVFTQ 360
           LTQNYLTNPLTIDLVGDSDQKLADGISLFSIVSDMRGKASIIGPLITEHAKGGKCIVFTQ
Sbjct: 301 LTQNYLTNPLTIDLVGDSDQKLADGISLFSIVSDMRGKASIIGPLITEHAKGGKCIVFTQ 360

Query: 361 TKRDADRLAYAMARNFRCEALHGDISQSQRERTLSGFRDGHFNVLVATDVAARGLDIPNV 420
           TKRDADRLAYAMARNFRCEALHGDISQSQRERTLSGFRDGHFNVLVATDVAARGLDIPNV
Sbjct: 361 TKRDADRLAYAMARNFRCEALHGDISQSQRERTLSGFRDGHFNVLVATDVAARGLDIPNV 420

Query: 421 DLVIHFELPNNTEIFVHRSGRTGRAGKKGSAILIYSQDQSRAVRMIEREVGCRFNELPKI 480
           DLVIHFELPNNTEIFVHRSGRTGRAGKKGSAILIYSQDQSRAVRMIEREVGCRFNELPKI
Sbjct: 421 DLVIHFELPNNTEIFVHRSGRTGRAGKKGSAILIYSQDQSRAVRMIEREVGCRFNELPKI 480

Query: 481 SVESGAHVDMFSGGGQFSSFGGGGFRDRRMNDSGRFGGQRGPSFGRSAGYENSGFRRSGG 540
           SVESGAHVDMFSGGGQFSSFGGGGFRDRRMNDSGRFGGQRGPSFGRSAGYENSGFRRSGG
Sbjct: 481 SVESGAHVDMFSGGGQFSSFGGGGFRDRRMNDSGRFGGQRGPSFGRSAGYENSGFRRSGG 540

Query: 541 RDSFGQGGRNSEPSSGGAGSFGSFGSGRSGGFGDFGSSSRSGGFGDFGGSGRSSGFGDRN 600
           RDSFGQGGRNSEPSSGGAGSFGSFGSGRSGGFGDFGSSSRSGGFGDFGGSGRSSGFGDRN
Sbjct: 541 RDSFGQGGRNSEPSSGGAGSFGSFGSGRSGGFGDFGSSSRSGGFGDFGGSGRSSGFGDRN 600

Query: 601 SKNSGLFGDMDADQRTGKRQF 622
           SKNSGLFGDMDADQRTGKRQF
Sbjct: 601 SKNSGLFGDMDADQRTGKRQF 621

[Close]
BLAST of CmoCh01G013830 vs. ExPASy TrEMBL
Match: A0A6J1J2Y8 (DEAD-box ATP-dependent RNA helicase 53, mitochondrial-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111480809 PE=4 SV=1)

HSP 1 Score: 1157.1 bits (2992), Expect = 0.0e+00
Identity = 611/621 (98.39%), Postives = 615/621 (99.03%), Query Frame = 0 

Query: 1   MMSSVLLRRSAALAASRGRVSSTFLAPIANFLTSSVDVNGGAVPAAEFGRFSTTGVTERA 60
           MMSSVLLRRSAALAASRGRVSSTFLAPIANFLTSSVDVNGG VPAAEFGRFSTTGVTERA
Sbjct: 1   MMSSVLLRRSAALAASRGRVSSTFLAPIANFLTSSVDVNGGVVPAAEFGRFSTTGVTERA 60

Query: 61  LGFGFQSMGFHSASGPLGFKSSLVSRAEFAVEEYDDASSSKSGDDGLEIGSLGIAPEIVS 120
           LGFGFQSMGFH+ASGPL FKSSLVSRAEFAVEEYDDASSSKSGD+GLEIGSLGIAPEIVS
Sbjct: 61  LGFGFQSMGFHAASGPLSFKSSLVSRAEFAVEEYDDASSSKSGDEGLEIGSLGIAPEIVS 120

Query: 121 ALAKKGITKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKIIQFNAKHGRGR 180
           ALAKKGITKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKIIQFNAKHGRGR
Sbjct: 121 ALAKKGITKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKIIQFNAKHGRGR 180

Query: 181 YPLALVLAPTRELARQVEKEFQEAAPNLDTICVYGGAPISRQMRQLDYGVDIAVGTPGRL 240
           YPLALVLAPTRELARQVEKEFQEAAPNLDTICVYGGAPISRQMRQLDYGVDIAVGTPGRL
Sbjct: 181 YPLALVLAPTRELARQVEKEFQEAAPNLDTICVYGGAPISRQMRQLDYGVDIAVGTPGRL 240

Query: 241 IDLLNRGSLNLSEVQFVVLDEADQMLQVGFQEDVEKILERLPQKRQTMMFSATMPSWIRK 300
           IDLLNRGSLNLSEVQFVVLDEADQMLQVGFQEDVEKILERLPQKRQTMMFSATMPSWIRK
Sbjct: 241 IDLLNRGSLNLSEVQFVVLDEADQMLQVGFQEDVEKILERLPQKRQTMMFSATMPSWIRK 300

Query: 301 LTQNYLTNPLTIDLVGDSDQKLADGISLFSIVSDMRGKASIIGPLITEHAKGGKCIVFTQ 360
           LTQNYLTNPLTIDLVGDSDQKLADGISLFSIVSDM GKASIIGPLITEHAKGGKCIVFTQ
Sbjct: 301 LTQNYLTNPLTIDLVGDSDQKLADGISLFSIVSDMHGKASIIGPLITEHAKGGKCIVFTQ 360

Query: 361 TKRDADRLAYAMARNFRCEALHGDISQSQRERTLSGFRDGHFNVLVATDVAARGLDIPNV 420
           TKRDADRLAYAMARNFRCEALHGDISQSQRERTLSGFRDGHFNVLVATDVAARGLDIPNV
Sbjct: 361 TKRDADRLAYAMARNFRCEALHGDISQSQRERTLSGFRDGHFNVLVATDVAARGLDIPNV 420

Query: 421 DLVIHFELPNNTEIFVHRSGRTGRAGKKGSAILIYSQDQSRAVRMIEREVGCRFNELPKI 480
           DLVIHFELPNNTEIFVHRSGRTGRAGKKGSAILIYSQDQSRAVRMIEREVGCRFNELP+I
Sbjct: 421 DLVIHFELPNNTEIFVHRSGRTGRAGKKGSAILIYSQDQSRAVRMIEREVGCRFNELPRI 480

Query: 481 SVESGAHVDMFSGGGQFSSFGGGGFRDRRMNDSGRFGGQRGPSFGRSAGYENSGFRRSGG 540
           SVESGAHVDMFSGGGQFSSF GGGFRDRRMNDSGRFGGQRGPSFGRSAGYE+SGFRRS G
Sbjct: 481 SVESGAHVDMFSGGGQFSSF-GGGFRDRRMNDSGRFGGQRGPSFGRSAGYESSGFRRSSG 540

Query: 541 RDSFGQGGRNSEPSSGGAGSFGSFGSGRSGGFGDFGSSSRSGGFGDFGGSGRSSGFGDRN 600
           RDSFGQGGRNSEPSSGGAGSFGSFGSGRSGGFGDFGSSSRSGGFGDFGGSGRSSGFGDRN
Sbjct: 541 RDSFGQGGRNSEPSSGGAGSFGSFGSGRSGGFGDFGSSSRSGGFGDFGGSGRSSGFGDRN 600

Query: 601 SKNSGLFGDMDADQRTGKRQF 622
           SKNSGLFGDMDADQRT KRQF
Sbjct: 601 SKNSGLFGDMDADQRTEKRQF 620

[Close]
BLAST of CmoCh01G013830 vs. ExPASy TrEMBL
Match: A0A6J1IXE8 (DEAD-box ATP-dependent RNA helicase 53, mitochondrial-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111480809 PE=4 SV=1)

HSP 1 Score: 1145.2 bits (2961), Expect = 0.0e+00
Identity = 611/641 (95.32%), Postives = 615/641 (95.94%), Query Frame = 0 

Query: 1   MMSSVLLRRSAALAASRGRVSSTFLAPIANFLTSSVDVNGGAVPAAEFGRFSTTGVTERA 60
           MMSSVLLRRSAALAASRGRVSSTFLAPIANFLTSSVDVNGG VPAAEFGRFSTTGVTERA
Sbjct: 1   MMSSVLLRRSAALAASRGRVSSTFLAPIANFLTSSVDVNGGVVPAAEFGRFSTTGVTERA 60

Query: 61  LGFGFQSMGFHSASGPLGFKSSLVSRAEFAVEEYDDASSSKSGDDGLEIGSLGIAPEIVS 120
           LGFGFQSMGFH+ASGPL FKSSLVSRAEFAVEEYDDASSSKSGD+GLEIGSLGIAPEIVS
Sbjct: 61  LGFGFQSMGFHAASGPLSFKSSLVSRAEFAVEEYDDASSSKSGDEGLEIGSLGIAPEIVS 120

Query: 121 ALAKKGITKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKIIQFNAKHGRGR 180
           ALAKKGITKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKIIQFNAKHGRGR
Sbjct: 121 ALAKKGITKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKIIQFNAKHGRGR 180

Query: 181 YPLALVLAPTRELARQVEKEFQEAAPNLDTICVYGGAPISRQMRQLDYGVDIAVGTPGRL 240
           YPLALVLAPTRELARQVEKEFQEAAPNLDTICVYGGAPISRQMRQLDYGVDIAVGTPGRL
Sbjct: 181 YPLALVLAPTRELARQVEKEFQEAAPNLDTICVYGGAPISRQMRQLDYGVDIAVGTPGRL 240

Query: 241 IDLLNRGSLNLSEVQFVVLDEADQMLQVGFQEDVEKILERLPQKRQTMMFSATMPSWIRK 300
           IDLLNRGSLNLSEVQFVVLDEADQMLQVGFQEDVEKILERLPQKRQTMMFSATMPSWIRK
Sbjct: 241 IDLLNRGSLNLSEVQFVVLDEADQMLQVGFQEDVEKILERLPQKRQTMMFSATMPSWIRK 300

Query: 301 LTQNYLTNPLTIDLVGDSDQKLADGISLFSIVSDMRGKASIIGPLITEHAKGGKCIVFTQ 360
           LTQNYLTNPLTIDLVGDSDQKLADGISLFSIVSDM GKASIIGPLITEHAKGGKCIVFTQ
Sbjct: 301 LTQNYLTNPLTIDLVGDSDQKLADGISLFSIVSDMHGKASIIGPLITEHAKGGKCIVFTQ 360

Query: 361 TKRDADRLAYAMARNFRCEALHGDISQSQRERTLSGFRDGHFNVLVATDVAARGLDIPNV 420
           TKRDADRLAYAMARNFRCEALHGDISQSQRERTLSGFRDGHFNVLVATDVAARGLDIPNV
Sbjct: 361 TKRDADRLAYAMARNFRCEALHGDISQSQRERTLSGFRDGHFNVLVATDVAARGLDIPNV 420

Query: 421 DLVIHFELPNNTEIFVHRSGRTGRAGKKGSAILIYSQDQSRAVRMIEREVGCRFNELPKI 480
           DLVIHFELPNNTEIFVHRSGRTGRAGKKGSAILIYSQDQSRAVRMIEREVGCRFNELP+I
Sbjct: 421 DLVIHFELPNNTEIFVHRSGRTGRAGKKGSAILIYSQDQSRAVRMIEREVGCRFNELPRI 480

Query: 481 SVESGAHVDMFSGGGQFSSFGGGGFRDRRMNDSGRFGGQRGPSFGRSAGYENSGFRRSGG 540
           SVESGAHVDMFSGGGQFSSF GGGFRDRRMNDSGRFGGQRGPSFGRSAGYE+SGFRRS G
Sbjct: 481 SVESGAHVDMFSGGGQFSSF-GGGFRDRRMNDSGRFGGQRGPSFGRSAGYESSGFRRSSG 540

Query: 541 RDSFGQGGRNSEPSSGG--------------------AGSFGSFGSGRSGGFGDFGSSSR 600
           RDSFGQGGRNSEPSSGG                    AGSFGSFGSGRSGGFGDFGSSSR
Sbjct: 541 RDSFGQGGRNSEPSSGGFSSFGSRSSGSAFGGSSSKNAGSFGSFGSGRSGGFGDFGSSSR 600

Query: 601 SGGFGDFGGSGRSSGFGDRNSKNSGLFGDMDADQRTGKRQF 622
           SGGFGDFGGSGRSSGFGDRNSKNSGLFGDMDADQRT KRQF
Sbjct: 601 SGGFGDFGGSGRSSGFGDRNSKNSGLFGDMDADQRTEKRQF 640

[Close]
BLAST of CmoCh01G013830 vs. ExPASy TrEMBL
Match: A0A6J1C209 (DEAD-box ATP-dependent RNA helicase 53-like OS=Momordica charantia OX=3673 GN=LOC111007545 PE=4 SV=1)

HSP 1 Score: 977.6 bits (2526), Expect = 2.4e-281
Identity = 530/621 (85.35%), Postives = 561/621 (90.34%), Query Frame = 0 

Query: 1   MMSSVLLRRSAALAASRGRVSSTFLAPIANFLTSSVDVNGGAVPAAEFGRFSTTGVTERA 60
           MMS+++LRRSAALA SRGRV++T L+PIAN L S VDVNGG V AAEFG+FS+  V +R 
Sbjct: 1   MMSALILRRSAALAISRGRVNATLLSPIANLLASPVDVNGGVVSAAEFGQFSSAVVMKRP 60

Query: 61  LGFGFQSMGFHSASGPLGFKSSLVSRAEFAVEEYDDASSSKSGDDGLEIGSLGIAPEIVS 120
           LGFG +   FH ASGPL F++SLVS+AEFAVEEYDDASSS+SGD+GLEI  LGIAPEIVS
Sbjct: 61  LGFGSRPKEFHVASGPLNFRASLVSQAEFAVEEYDDASSSRSGDEGLEISKLGIAPEIVS 120

Query: 121 ALAKKGITKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKIIQFNAKHGRGR 180
           ALAKKGITKLFPIQ+AVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKIIQFNAKHGRGR
Sbjct: 121 ALAKKGITKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKIIQFNAKHGRGR 180

Query: 181 YPLALVLAPTRELARQVEKEFQEAAPNLDTICVYGGAPISRQMRQLDYGVDIAVGTPGRL 240
            PLALVLAPTRELARQVEKEFQEAAP+LDTICVYGG PISRQMRQLDYGVDIAVGTPGRL
Sbjct: 181 NPLALVLAPTRELARQVEKEFQEAAPSLDTICVYGGTPISRQMRQLDYGVDIAVGTPGRL 240

Query: 241 IDLLNRGSLNLSEVQFVVLDEADQMLQVGFQEDVEKILERLPQKRQTMMFSATMPSWIRK 300
           IDLLNRGSLNLSEVQFVVLDEADQMLQVGFQEDVEKILERLP+KRQ+MMFSATMPSWIRK
Sbjct: 241 IDLLNRGSLNLSEVQFVVLDEADQMLQVGFQEDVEKILERLPKKRQSMMFSATMPSWIRK 300

Query: 301 LTQNYLTNPLTIDLVGDSDQKLADGISLFSIVSDMRGKASIIGPLITEHAKGGKCIVFTQ 360
           LTQNYL NPLTIDLVGDSDQKLADGISLFSIV+DM GKASIIGPLI EHAKGGKCIVFTQ
Sbjct: 301 LTQNYLINPLTIDLVGDSDQKLADGISLFSIVADMHGKASIIGPLIKEHAKGGKCIVFTQ 360

Query: 361 TKRDADRLAYAMARNFRCEALHGDISQSQRERTLSGFRDGHFNVLVATDVAARGLDIPNV 420
           TKRDADRLAYAM ++FRCEALHGDISQSQRERTLSGFRDG FN+LVATDVAARGLDIPNV
Sbjct: 361 TKRDADRLAYAMPKDFRCEALHGDISQSQRERTLSGFRDGQFNILVATDVAARGLDIPNV 420

Query: 421 DLVIHFELPNNTEIFVHRSGRTGRAGKKGSAILIYSQDQSRAVRMIEREVGCRFNELPKI 480
           DLVIHFELPNN EIFVHRSGRTGRAGKKGSAILIYSQDQSRAVR+IEREVGCRF ELP+I
Sbjct: 421 DLVIHFELPNNAEIFVHRSGRTGRAGKKGSAILIYSQDQSRAVRVIEREVGCRFTELPRI 480

Query: 481 SVESGAHVDMFSGGGQFSSFGG-GGFRDRRMNDSGRFGGQRGPSFGRSAGYENSGFRRSG 540
           +VE GAHVDMFS  G  S FG  GGFRDRRMND+GRFGGQRGPSFGR  GY NSG  RS 
Sbjct: 481 TVEGGAHVDMFSDRGNGSQFGSFGGFRDRRMNDTGRFGGQRGPSFGR-GGYGNSGSTRSS 540

Query: 541 G-RDSFGQGGRNSEPSSGGAGSFGS-----------FGSGRSGGFGDFGSSSRSGGFGDF 600
           G +DSFGQ GRNS  SSGG GSFG+            GSGRSGGFGDFG+SSRSGGFGDF
Sbjct: 541 GFKDSFGQMGRNSGASSGGFGSFGARSSNNAGNFSWSGSGRSGGFGDFGNSSRSGGFGDF 600

Query: 601 GGSGRSSGFGDRNSKNSGLFG 609
            GSGRSSGFGDRNS+NSGLFG
Sbjct: 601 -GSGRSSGFGDRNSRNSGLFG 619

[Close]
BLAST of CmoCh01G013830 vs. ExPASy TrEMBL
Match: A0A0A0KZ67 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G616790 PE=4 SV=1)

HSP 1 Score: 948.3 bits (2450), Expect = 1.5e-272
Identity = 527/646 (81.58%), Postives = 567/646 (87.77%), Query Frame = 0 

Query: 1   MMSSVLLRRSAALAASRGRVSSTFLAPIANFLTSSVDVNGGAVPAAEFGRFSTTGVTERA 60
           MMS++LLRRS+ALAAS GR++ST  APIANFL+S V VNGG VPAA+F  FST GVTE++
Sbjct: 1   MMSAILLRRSSALAASGGRINSTLFAPIANFLSSPVVVNGGVVPAADFQHFSTIGVTEKS 60

Query: 61  LGFGFQSMGFHSASGPLGFKSSLVSRAEFAVEEYDDASSSKSGDDGLEIGSLGIAPEIVS 120
           LGFGFQS GFH+ASGPL FK+SLVS+AEFAVE+YD ASSSKSGD+GLEIG LGIAPEIVS
Sbjct: 61  LGFGFQSKGFHAASGPLNFKASLVSKAEFAVEDYDCASSSKSGDEGLEIGKLGIAPEIVS 120

Query: 121 ALAKKGITKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKIIQFNAKHGRGR 180
           ALA+KGITKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDK+IQFNAK+GRGR
Sbjct: 121 ALARKGITKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKLIQFNAKNGRGR 180

Query: 181 YPLALVLAPTRELARQVEKEFQEAAPNLDTICVYGGAPISRQMRQLDYGVDIAVGTPGRL 240
            PLALVLAPTRELARQVEKEFQEAAP+LDTICVYGGAPIS+QMRQLDYGVDIAVGTPGRL
Sbjct: 181 NPLALVLAPTRELARQVEKEFQEAAPSLDTICVYGGAPISQQMRQLDYGVDIAVGTPGRL 240

Query: 241 IDLLNRGSLNLSEVQFVVLDEADQMLQVGFQEDVEKILERLPQKRQTMMFSATMPSWIRK 300
           IDLLNRGSLNLSEVQFVVLDEADQMLQVGFQEDVEKILERLPQKRQ+MMFSATMPSWI K
Sbjct: 241 IDLLNRGSLNLSEVQFVVLDEADQMLQVGFQEDVEKILERLPQKRQSMMFSATMPSWILK 300

Query: 301 LTQNYLTNPLTIDLVGDSDQKLADGISLFSIVSDMRGKASIIGPLITEHAKGGKCIVFTQ 360
           L++NYL NPLTIDLVGDSDQKLADGISLFS+VS+  GKASIIGPLITEH KGGKCI+FTQ
Sbjct: 301 LSRNYLNNPLTIDLVGDSDQKLADGISLFSVVSETYGKASIIGPLITEHGKGGKCIIFTQ 360

Query: 361 TKRDADRLAYAMARNFRCEALHGDISQSQRERTLSGFRDGHFNVLVATDVAARGLDIPNV 420
           TKRDADRLAYAM RN RCEALHGDISQSQRERTLSGFRDG FNVLVATDVAARGLDIPNV
Sbjct: 361 TKRDADRLAYAMGRNLRCEALHGDISQSQRERTLSGFRDGRFNVLVATDVAARGLDIPNV 420

Query: 421 DLVIHFELPNNTEIFVHRSGRTGRAGKKGSAILIYSQDQSRAVRMIEREVGCRFNELPKI 480
           DLVIHFELPNNTEIFVHRSGRTGRAGKKGS ILIYSQDQ+RA+RMIEREVGCRFNELP+I
Sbjct: 421 DLVIHFELPNNTEIFVHRSGRTGRAGKKGSVILIYSQDQTRAIRMIEREVGCRFNELPRI 480

Query: 481 SVESGAHVDMFSGGGQFSSFGGGGFRDRRMNDSGRFGGQRGPSFGRSAGYENSGFRRSGG 540
           +VE+GAHVDMFSGG    SF GGGF DR+MN+SGRF G RG SFGRS GYE+S F RS G
Sbjct: 481 TVEAGAHVDMFSGG----SF-GGGFGDRQMNNSGRF-GNRGGSFGRSGGYESSSFGRSIG 540

Query: 541 RD------SFGQGGRNSEPSSGG---------AGSFGSFG-SGRSGGFGDFGS--SSRSG 600
           R+      SFG  G  +  SSGG         AG FG  G S RSGGFG+FGS  S RSG
Sbjct: 541 RNSGPSSGSFGSFGSRNSNSSGGFGRPDFGQSAGRFGDSGSSNRSGGFGNFGSSGSGRSG 600

Query: 601 GFGDFG--GSGRSSGFGDRNSKN-SGLFG----DMDADQRTGKRQF 622
           GFGDFG  GSGRS GFGD  S N SG FG    ++DA Q TG+R+F
Sbjct: 601 GFGDFGSSGSGRSGGFGDFGSSNRSGGFGGFGDNLDAKQGTGRRKF 640

[Close]
BLAST of CmoCh01G013830 vs. NCBI nr
Match: XP_022940069.1 (DEAD-box ATP-dependent RNA helicase 53, mitochondrial-like [Cucurbita moschata])

HSP 1 Score: 1180.2 bits (3052), Expect = 0.0e+00
Identity = 621/621 (100.00%), Postives = 621/621 (100.00%), Query Frame = 0 

Query: 1   MMSSVLLRRSAALAASRGRVSSTFLAPIANFLTSSVDVNGGAVPAAEFGRFSTTGVTERA 60
           MMSSVLLRRSAALAASRGRVSSTFLAPIANFLTSSVDVNGGAVPAAEFGRFSTTGVTERA
Sbjct: 1   MMSSVLLRRSAALAASRGRVSSTFLAPIANFLTSSVDVNGGAVPAAEFGRFSTTGVTERA 60

Query: 61  LGFGFQSMGFHSASGPLGFKSSLVSRAEFAVEEYDDASSSKSGDDGLEIGSLGIAPEIVS 120
           LGFGFQSMGFHSASGPLGFKSSLVSRAEFAVEEYDDASSSKSGDDGLEIGSLGIAPEIVS
Sbjct: 61  LGFGFQSMGFHSASGPLGFKSSLVSRAEFAVEEYDDASSSKSGDDGLEIGSLGIAPEIVS 120

Query: 121 ALAKKGITKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKIIQFNAKHGRGR 180
           ALAKKGITKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKIIQFNAKHGRGR
Sbjct: 121 ALAKKGITKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKIIQFNAKHGRGR 180

Query: 181 YPLALVLAPTRELARQVEKEFQEAAPNLDTICVYGGAPISRQMRQLDYGVDIAVGTPGRL 240
           YPLALVLAPTRELARQVEKEFQEAAPNLDTICVYGGAPISRQMRQLDYGVDIAVGTPGRL
Sbjct: 181 YPLALVLAPTRELARQVEKEFQEAAPNLDTICVYGGAPISRQMRQLDYGVDIAVGTPGRL 240

Query: 241 IDLLNRGSLNLSEVQFVVLDEADQMLQVGFQEDVEKILERLPQKRQTMMFSATMPSWIRK 300
           IDLLNRGSLNLSEVQFVVLDEADQMLQVGFQEDVEKILERLPQKRQTMMFSATMPSWIRK
Sbjct: 241 IDLLNRGSLNLSEVQFVVLDEADQMLQVGFQEDVEKILERLPQKRQTMMFSATMPSWIRK 300

Query: 301 LTQNYLTNPLTIDLVGDSDQKLADGISLFSIVSDMRGKASIIGPLITEHAKGGKCIVFTQ 360
           LTQNYLTNPLTIDLVGDSDQKLADGISLFSIVSDMRGKASIIGPLITEHAKGGKCIVFTQ
Sbjct: 301 LTQNYLTNPLTIDLVGDSDQKLADGISLFSIVSDMRGKASIIGPLITEHAKGGKCIVFTQ 360

Query: 361 TKRDADRLAYAMARNFRCEALHGDISQSQRERTLSGFRDGHFNVLVATDVAARGLDIPNV 420
           TKRDADRLAYAMARNFRCEALHGDISQSQRERTLSGFRDGHFNVLVATDVAARGLDIPNV
Sbjct: 361 TKRDADRLAYAMARNFRCEALHGDISQSQRERTLSGFRDGHFNVLVATDVAARGLDIPNV 420

Query: 421 DLVIHFELPNNTEIFVHRSGRTGRAGKKGSAILIYSQDQSRAVRMIEREVGCRFNELPKI 480
           DLVIHFELPNNTEIFVHRSGRTGRAGKKGSAILIYSQDQSRAVRMIEREVGCRFNELPKI
Sbjct: 421 DLVIHFELPNNTEIFVHRSGRTGRAGKKGSAILIYSQDQSRAVRMIEREVGCRFNELPKI 480

Query: 481 SVESGAHVDMFSGGGQFSSFGGGGFRDRRMNDSGRFGGQRGPSFGRSAGYENSGFRRSGG 540
           SVESGAHVDMFSGGGQFSSFGGGGFRDRRMNDSGRFGGQRGPSFGRSAGYENSGFRRSGG
Sbjct: 481 SVESGAHVDMFSGGGQFSSFGGGGFRDRRMNDSGRFGGQRGPSFGRSAGYENSGFRRSGG 540

Query: 541 RDSFGQGGRNSEPSSGGAGSFGSFGSGRSGGFGDFGSSSRSGGFGDFGGSGRSSGFGDRN 600
           RDSFGQGGRNSEPSSGGAGSFGSFGSGRSGGFGDFGSSSRSGGFGDFGGSGRSSGFGDRN
Sbjct: 541 RDSFGQGGRNSEPSSGGAGSFGSFGSGRSGGFGDFGSSSRSGGFGDFGGSGRSSGFGDRN 600

Query: 601 SKNSGLFGDMDADQRTGKRQF 622
           SKNSGLFGDMDADQRTGKRQF
Sbjct: 601 SKNSGLFGDMDADQRTGKRQF 621

[Close]
BLAST of CmoCh01G013830 vs. NCBI nr
Match: KAG7037512.1 (DEAD-box ATP-dependent RNA helicase 53 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1166.8 bits (3017), Expect = 0.0e+00
Identity = 620/641 (96.72%), Postives = 620/641 (96.72%), Query Frame = 0 

Query: 1   MMSSVLLRRSAALAASRGRVSSTFLAPIANFLTSSVDVNGGAVPAAEFGRFSTTGVTERA 60
           MMSSVLLRRSAALAASRGRVSSTFLAPIANFLTSSVDVNGG VPAAEFGRFSTTGVTERA
Sbjct: 1   MMSSVLLRRSAALAASRGRVSSTFLAPIANFLTSSVDVNGGVVPAAEFGRFSTTGVTERA 60

Query: 61  LGFGFQSMGFHSASGPLGFKSSLVSRAEFAVEEYDDASSSKSGDDGLEIGSLGIAPEIVS 120
           LGFGFQSMGFHSASGPLGFKSSLVSRAEFAVEEYDDASSSKSGDDGLEIGSLGIAPEIVS
Sbjct: 61  LGFGFQSMGFHSASGPLGFKSSLVSRAEFAVEEYDDASSSKSGDDGLEIGSLGIAPEIVS 120

Query: 121 ALAKKGITKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKIIQFNAKHGRGR 180
           ALAKKGITKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKIIQFNAKHGRGR
Sbjct: 121 ALAKKGITKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKIIQFNAKHGRGR 180

Query: 181 YPLALVLAPTRELARQVEKEFQEAAPNLDTICVYGGAPISRQMRQLDYGVDIAVGTPGRL 240
           YPLALVLAPTRELARQVEKEFQEAAPNLDTICVYGGAPISRQMRQLDYGVDIAVGTPGRL
Sbjct: 181 YPLALVLAPTRELARQVEKEFQEAAPNLDTICVYGGAPISRQMRQLDYGVDIAVGTPGRL 240

Query: 241 IDLLNRGSLNLSEVQFVVLDEADQMLQVGFQEDVEKILERLPQKRQTMMFSATMPSWIRK 300
           IDLLNRGSLNLSEVQFVVLDEADQMLQVGFQEDVEKILERLPQKRQTMMFSATMPSWIRK
Sbjct: 241 IDLLNRGSLNLSEVQFVVLDEADQMLQVGFQEDVEKILERLPQKRQTMMFSATMPSWIRK 300

Query: 301 LTQNYLTNPLTIDLVGDSDQKLADGISLFSIVSDMRGKASIIGPLITEHAKGGKCIVFTQ 360
           LTQNYLTNPLTIDLVGDSDQKLADGISLFSIVSDMRGKASIIGPLITEHAKGGKCIVFTQ
Sbjct: 301 LTQNYLTNPLTIDLVGDSDQKLADGISLFSIVSDMRGKASIIGPLITEHAKGGKCIVFTQ 360

Query: 361 TKRDADRLAYAMARNFRCEALHGDISQSQRERTLSGFRDGHFNVLVATDVAARGLDIPNV 420
           TKRDADRLAYAMARNFRCEALHGDISQSQRERTLSGFRDGHFNVLVATDVAARGLDIPNV
Sbjct: 361 TKRDADRLAYAMARNFRCEALHGDISQSQRERTLSGFRDGHFNVLVATDVAARGLDIPNV 420

Query: 421 DLVIHFELPNNTEIFVHRSGRTGRAGKKGSAILIYSQDQSRAVRMIEREVGCRFNELPKI 480
           DLVIHFELPNNTEIFVHRSGRTGRAGKKGSAILIYSQDQSRAVRMIEREVGCRFNELPKI
Sbjct: 421 DLVIHFELPNNTEIFVHRSGRTGRAGKKGSAILIYSQDQSRAVRMIEREVGCRFNELPKI 480

Query: 481 SVESGAHVDMFSGGGQFSSFGGGGFRDRRMNDSGRFGGQRGPSFGRSAGYENSGFRRSGG 540
           SVESGAHVDMFSGGGQFSSFGGGGFRDRRMNDSGRFGGQRGPSFGRSAGYENSGFRRSGG
Sbjct: 481 SVESGAHVDMFSGGGQFSSFGGGGFRDRRMNDSGRFGGQRGPSFGRSAGYENSGFRRSGG 540

Query: 541 RDSFGQGGRNSEPSSGG--------------------AGSFGSFGSGRSGGFGDFGSSSR 600
           RDSFGQGGRNSEPSSGG                    AGSFGSFGSGRSGGFGDFGSSSR
Sbjct: 541 RDSFGQGGRNSEPSSGGFSSFGSRSSGSAFGGSSSNNAGSFGSFGSGRSGGFGDFGSSSR 600

Query: 601 SGGFGDFGGSGRSSGFGDRNSKNSGLFGDMDADQRTGKRQF 622
           SGGFGDFGGSGRSSGFGDRNSKNSGLFGDMDADQRTGKRQF
Sbjct: 601 SGGFGDFGGSGRSSGFGDRNSKNSGLFGDMDADQRTGKRQF 641

[Close]
BLAST of CmoCh01G013830 vs. NCBI nr
Match: XP_023524742.1 (DEAD-box ATP-dependent RNA helicase 53, mitochondrial-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1159.1 bits (2997), Expect = 0.0e+00
Identity = 616/641 (96.10%), Postives = 618/641 (96.41%), Query Frame = 0 

Query: 1   MMSSVLLRRSAALAASRGRVSSTFLAPIANFLTSSVDVNGGAVPAAEFGRFSTTGVTERA 60
           MMSSVLLRRSAALAASRGRVSSTFLAPIANFLTSSVDVNGG VPAAEFGRFSTTGVTERA
Sbjct: 1   MMSSVLLRRSAALAASRGRVSSTFLAPIANFLTSSVDVNGGVVPAAEFGRFSTTGVTERA 60

Query: 61  LGFGFQSMGFHSASGPLGFKSSLVSRAEFAVEEYDDASSSKSGDDGLEIGSLGIAPEIVS 120
           LGFGFQSMGFHSASGPL FKSSLVSRAEFAVE+YDDASSSKSGD+GLEIGSLGIAPEIVS
Sbjct: 61  LGFGFQSMGFHSASGPLSFKSSLVSRAEFAVEDYDDASSSKSGDEGLEIGSLGIAPEIVS 120

Query: 121 ALAKKGITKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKIIQFNAKHGRGR 180
           ALAKKGITKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKIIQFNAKHGRGR
Sbjct: 121 ALAKKGITKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKIIQFNAKHGRGR 180

Query: 181 YPLALVLAPTRELARQVEKEFQEAAPNLDTICVYGGAPISRQMRQLDYGVDIAVGTPGRL 240
           YPLALVLAPTRELARQVEKEFQEAAPNLDTICVYGGAPIS QMRQLDYGVDIAVGTPGRL
Sbjct: 181 YPLALVLAPTRELARQVEKEFQEAAPNLDTICVYGGAPISGQMRQLDYGVDIAVGTPGRL 240

Query: 241 IDLLNRGSLNLSEVQFVVLDEADQMLQVGFQEDVEKILERLPQKRQTMMFSATMPSWIRK 300
           IDLLNRGSLNLSEVQFVVLDEADQMLQVGFQEDVEKILERLPQKRQTMMFSATMPSWIRK
Sbjct: 241 IDLLNRGSLNLSEVQFVVLDEADQMLQVGFQEDVEKILERLPQKRQTMMFSATMPSWIRK 300

Query: 301 LTQNYLTNPLTIDLVGDSDQKLADGISLFSIVSDMRGKASIIGPLITEHAKGGKCIVFTQ 360
           LTQNYLTNPLTIDLVGDSDQKLADGISLFSIVSDMRGKASIIGPLITEHAKGGKCIVFTQ
Sbjct: 301 LTQNYLTNPLTIDLVGDSDQKLADGISLFSIVSDMRGKASIIGPLITEHAKGGKCIVFTQ 360

Query: 361 TKRDADRLAYAMARNFRCEALHGDISQSQRERTLSGFRDGHFNVLVATDVAARGLDIPNV 420
           TKRDADRLAYAMARNFRCEALHGDISQSQRERTLSGFRDGHFNVLVATDVAARGLDIPNV
Sbjct: 361 TKRDADRLAYAMARNFRCEALHGDISQSQRERTLSGFRDGHFNVLVATDVAARGLDIPNV 420

Query: 421 DLVIHFELPNNTEIFVHRSGRTGRAGKKGSAILIYSQDQSRAVRMIEREVGCRFNELPKI 480
           DLVIHFELPNNTEIFVHRSGRTGRAGKKGSAILIYSQDQSRAVRMIEREVGCRFNELPKI
Sbjct: 421 DLVIHFELPNNTEIFVHRSGRTGRAGKKGSAILIYSQDQSRAVRMIEREVGCRFNELPKI 480

Query: 481 SVESGAHVDMFSGGGQFSSFGGGGFRDRRMNDSGRFGGQRGPSFGRSAGYENSGFRRSGG 540
           SVESGAHVDMFSGGGQFSSFGGGGFRDRRMNDSGRFGGQRGPSFGRSAGYENSGFRRSGG
Sbjct: 481 SVESGAHVDMFSGGGQFSSFGGGGFRDRRMNDSGRFGGQRGPSFGRSAGYENSGFRRSGG 540

Query: 541 RDSFGQGGRNSEPSSGG--------------------AGSFGSFGSGRSGGFGDFGSSSR 600
           RDSFGQGGRNSEPSSGG                    AGSFGSFGSGRSGGFGDFGSSSR
Sbjct: 541 RDSFGQGGRNSEPSSGGFSSFGSRSSGSAFGGSSSNNAGSFGSFGSGRSGGFGDFGSSSR 600

Query: 601 SGGFGDFGGSGRSSGFGDRNSKNSGLFGDMDADQRTGKRQF 622
           SGGFGDFGGSGRSSGFGDRNSKNSGLFGDMDADQRTGKRQF
Sbjct: 601 SGGFGDFGGSGRSSGFGDRNSKNSGLFGDMDADQRTGKRQF 641

[Close]
BLAST of CmoCh01G013830 vs. NCBI nr
Match: XP_022981753.1 (DEAD-box ATP-dependent RNA helicase 53, mitochondrial-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 1157.1 bits (2992), Expect = 0.0e+00
Identity = 611/621 (98.39%), Postives = 615/621 (99.03%), Query Frame = 0 

Query: 1   MMSSVLLRRSAALAASRGRVSSTFLAPIANFLTSSVDVNGGAVPAAEFGRFSTTGVTERA 60
           MMSSVLLRRSAALAASRGRVSSTFLAPIANFLTSSVDVNGG VPAAEFGRFSTTGVTERA
Sbjct: 1   MMSSVLLRRSAALAASRGRVSSTFLAPIANFLTSSVDVNGGVVPAAEFGRFSTTGVTERA 60

Query: 61  LGFGFQSMGFHSASGPLGFKSSLVSRAEFAVEEYDDASSSKSGDDGLEIGSLGIAPEIVS 120
           LGFGFQSMGFH+ASGPL FKSSLVSRAEFAVEEYDDASSSKSGD+GLEIGSLGIAPEIVS
Sbjct: 61  LGFGFQSMGFHAASGPLSFKSSLVSRAEFAVEEYDDASSSKSGDEGLEIGSLGIAPEIVS 120

Query: 121 ALAKKGITKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKIIQFNAKHGRGR 180
           ALAKKGITKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKIIQFNAKHGRGR
Sbjct: 121 ALAKKGITKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKIIQFNAKHGRGR 180

Query: 181 YPLALVLAPTRELARQVEKEFQEAAPNLDTICVYGGAPISRQMRQLDYGVDIAVGTPGRL 240
           YPLALVLAPTRELARQVEKEFQEAAPNLDTICVYGGAPISRQMRQLDYGVDIAVGTPGRL
Sbjct: 181 YPLALVLAPTRELARQVEKEFQEAAPNLDTICVYGGAPISRQMRQLDYGVDIAVGTPGRL 240

Query: 241 IDLLNRGSLNLSEVQFVVLDEADQMLQVGFQEDVEKILERLPQKRQTMMFSATMPSWIRK 300
           IDLLNRGSLNLSEVQFVVLDEADQMLQVGFQEDVEKILERLPQKRQTMMFSATMPSWIRK
Sbjct: 241 IDLLNRGSLNLSEVQFVVLDEADQMLQVGFQEDVEKILERLPQKRQTMMFSATMPSWIRK 300

Query: 301 LTQNYLTNPLTIDLVGDSDQKLADGISLFSIVSDMRGKASIIGPLITEHAKGGKCIVFTQ 360
           LTQNYLTNPLTIDLVGDSDQKLADGISLFSIVSDM GKASIIGPLITEHAKGGKCIVFTQ
Sbjct: 301 LTQNYLTNPLTIDLVGDSDQKLADGISLFSIVSDMHGKASIIGPLITEHAKGGKCIVFTQ 360

Query: 361 TKRDADRLAYAMARNFRCEALHGDISQSQRERTLSGFRDGHFNVLVATDVAARGLDIPNV 420
           TKRDADRLAYAMARNFRCEALHGDISQSQRERTLSGFRDGHFNVLVATDVAARGLDIPNV
Sbjct: 361 TKRDADRLAYAMARNFRCEALHGDISQSQRERTLSGFRDGHFNVLVATDVAARGLDIPNV 420

Query: 421 DLVIHFELPNNTEIFVHRSGRTGRAGKKGSAILIYSQDQSRAVRMIEREVGCRFNELPKI 480
           DLVIHFELPNNTEIFVHRSGRTGRAGKKGSAILIYSQDQSRAVRMIEREVGCRFNELP+I
Sbjct: 421 DLVIHFELPNNTEIFVHRSGRTGRAGKKGSAILIYSQDQSRAVRMIEREVGCRFNELPRI 480

Query: 481 SVESGAHVDMFSGGGQFSSFGGGGFRDRRMNDSGRFGGQRGPSFGRSAGYENSGFRRSGG 540
           SVESGAHVDMFSGGGQFSSF GGGFRDRRMNDSGRFGGQRGPSFGRSAGYE+SGFRRS G
Sbjct: 481 SVESGAHVDMFSGGGQFSSF-GGGFRDRRMNDSGRFGGQRGPSFGRSAGYESSGFRRSSG 540

Query: 541 RDSFGQGGRNSEPSSGGAGSFGSFGSGRSGGFGDFGSSSRSGGFGDFGGSGRSSGFGDRN 600
           RDSFGQGGRNSEPSSGGAGSFGSFGSGRSGGFGDFGSSSRSGGFGDFGGSGRSSGFGDRN
Sbjct: 541 RDSFGQGGRNSEPSSGGAGSFGSFGSGRSGGFGDFGSSSRSGGFGDFGGSGRSSGFGDRN 600

Query: 601 SKNSGLFGDMDADQRTGKRQF 622
           SKNSGLFGDMDADQRT KRQF
Sbjct: 601 SKNSGLFGDMDADQRTEKRQF 620

[Close]
BLAST of CmoCh01G013830 vs. NCBI nr
Match: XP_022981751.1 (DEAD-box ATP-dependent RNA helicase 53, mitochondrial-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 1145.2 bits (2961), Expect = 0.0e+00
Identity = 611/641 (95.32%), Postives = 615/641 (95.94%), Query Frame = 0 

Query: 1   MMSSVLLRRSAALAASRGRVSSTFLAPIANFLTSSVDVNGGAVPAAEFGRFSTTGVTERA 60
           MMSSVLLRRSAALAASRGRVSSTFLAPIANFLTSSVDVNGG VPAAEFGRFSTTGVTERA
Sbjct: 1   MMSSVLLRRSAALAASRGRVSSTFLAPIANFLTSSVDVNGGVVPAAEFGRFSTTGVTERA 60

Query: 61  LGFGFQSMGFHSASGPLGFKSSLVSRAEFAVEEYDDASSSKSGDDGLEIGSLGIAPEIVS 120
           LGFGFQSMGFH+ASGPL FKSSLVSRAEFAVEEYDDASSSKSGD+GLEIGSLGIAPEIVS
Sbjct: 61  LGFGFQSMGFHAASGPLSFKSSLVSRAEFAVEEYDDASSSKSGDEGLEIGSLGIAPEIVS 120

Query: 121 ALAKKGITKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKIIQFNAKHGRGR 180
           ALAKKGITKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKIIQFNAKHGRGR
Sbjct: 121 ALAKKGITKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKIIQFNAKHGRGR 180

Query: 181 YPLALVLAPTRELARQVEKEFQEAAPNLDTICVYGGAPISRQMRQLDYGVDIAVGTPGRL 240
           YPLALVLAPTRELARQVEKEFQEAAPNLDTICVYGGAPISRQMRQLDYGVDIAVGTPGRL
Sbjct: 181 YPLALVLAPTRELARQVEKEFQEAAPNLDTICVYGGAPISRQMRQLDYGVDIAVGTPGRL 240

Query: 241 IDLLNRGSLNLSEVQFVVLDEADQMLQVGFQEDVEKILERLPQKRQTMMFSATMPSWIRK 300
           IDLLNRGSLNLSEVQFVVLDEADQMLQVGFQEDVEKILERLPQKRQTMMFSATMPSWIRK
Sbjct: 241 IDLLNRGSLNLSEVQFVVLDEADQMLQVGFQEDVEKILERLPQKRQTMMFSATMPSWIRK 300

Query: 301 LTQNYLTNPLTIDLVGDSDQKLADGISLFSIVSDMRGKASIIGPLITEHAKGGKCIVFTQ 360
           LTQNYLTNPLTIDLVGDSDQKLADGISLFSIVSDM GKASIIGPLITEHAKGGKCIVFTQ
Sbjct: 301 LTQNYLTNPLTIDLVGDSDQKLADGISLFSIVSDMHGKASIIGPLITEHAKGGKCIVFTQ 360

Query: 361 TKRDADRLAYAMARNFRCEALHGDISQSQRERTLSGFRDGHFNVLVATDVAARGLDIPNV 420
           TKRDADRLAYAMARNFRCEALHGDISQSQRERTLSGFRDGHFNVLVATDVAARGLDIPNV
Sbjct: 361 TKRDADRLAYAMARNFRCEALHGDISQSQRERTLSGFRDGHFNVLVATDVAARGLDIPNV 420

Query: 421 DLVIHFELPNNTEIFVHRSGRTGRAGKKGSAILIYSQDQSRAVRMIEREVGCRFNELPKI 480
           DLVIHFELPNNTEIFVHRSGRTGRAGKKGSAILIYSQDQSRAVRMIEREVGCRFNELP+I
Sbjct: 421 DLVIHFELPNNTEIFVHRSGRTGRAGKKGSAILIYSQDQSRAVRMIEREVGCRFNELPRI 480

Query: 481 SVESGAHVDMFSGGGQFSSFGGGGFRDRRMNDSGRFGGQRGPSFGRSAGYENSGFRRSGG 540
           SVESGAHVDMFSGGGQFSSF GGGFRDRRMNDSGRFGGQRGPSFGRSAGYE+SGFRRS G
Sbjct: 481 SVESGAHVDMFSGGGQFSSF-GGGFRDRRMNDSGRFGGQRGPSFGRSAGYESSGFRRSSG 540

Query: 541 RDSFGQGGRNSEPSSGG--------------------AGSFGSFGSGRSGGFGDFGSSSR 600
           RDSFGQGGRNSEPSSGG                    AGSFGSFGSGRSGGFGDFGSSSR
Sbjct: 541 RDSFGQGGRNSEPSSGGFSSFGSRSSGSAFGGSSSKNAGSFGSFGSGRSGGFGDFGSSSR 600

Query: 601 SGGFGDFGGSGRSSGFGDRNSKNSGLFGDMDADQRTGKRQF 622
           SGGFGDFGGSGRSSGFGDRNSKNSGLFGDMDADQRT KRQF
Sbjct: 601 SGGFGDFGGSGRSSGFGDRNSKNSGLFGDMDADQRTEKRQF 640

[Close]
BLAST of CmoCh01G013830 vs. TAIR 10
Match: AT3G22330.1 (putative mitochondrial RNA helicase 2 )

HSP 1 Score: 702.2 bits (1811), Expect = 3.7e-202
Identity = 401/620 (64.68%), Postives = 468/620 (75.48%), Query Frame = 0 

Query: 2   MSSVLLRRSAALAASRGRVSSTFLAPIANFLTSSVDVNGGAVPAAEFGRFSTTGVTERAL 61
           M + +LRRS  L AS+  +S++  +       ++V  +  A  A      +  G ++   
Sbjct: 1   MITTVLRRS-LLDASKRNLSASLTS------INTVLFHNLAPAATRVSDLALIGSSDVKA 60

Query: 62  G--FGFQSMGFHSASGPLGFKSSLVSRAEFAVEEYDD---ASSSKSGDDGLEIGSLGIAP 121
           G  FG ++ G H  SGPL F++S+VS+A FA+ E  +     S   G DGL I  LGI+P
Sbjct: 61  GFPFGVEAKGIHFQSGPLDFRASMVSQAGFAISESSERRVGDSESVGGDGLAISELGISP 120

Query: 122 EIVSALAKKGITKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKIIQFNAKH 181
           EIV AL+ KGI KLFPIQ+AVLEPAM+GRDMIGRARTGTGKTLAFGIPI+DKII++NAKH
Sbjct: 121 EIVKALSSKGIEKLFPIQKAVLEPAMEGRDMIGRARTGTGKTLAFGIPIIDKIIKYNAKH 180

Query: 182 GRGRYPLALVLAPTRELARQVEKEFQEAAPNLDTICVYGGAPISRQMRQLDYGVDIAVGT 241
           GRGR PL LVLAPTRELARQVEKEF+E+AP+LDTIC+YGG PI +QMRQLDYGVD+AVGT
Sbjct: 181 GRGRNPLCLVLAPTRELARQVEKEFRESAPSLDTICLYGGTPIGQQMRQLDYGVDVAVGT 240

Query: 242 PGRLIDLLNRGSLNLSEVQFVVLDEADQMLQVGFQEDVEKILERLPQKRQTMMFSATMPS 301
           PGR+IDL+ RG+LNLSEVQFVVLDEADQMLQVGF EDVE ILE+LP+KRQ+MMFSATMPS
Sbjct: 241 PGRVIDLMKRGALNLSEVQFVVLDEADQMLQVGFAEDVEIILEKLPEKRQSMMFSATMPS 300

Query: 302 WIRKLTQNYLTNPLTIDLVGDSDQKLADGISLFSIVSDMRGKASIIGPLITEHAKGGKCI 361
           WIR LT+ YL NPLT+DLVGDSDQKLADGI+ +SI++D  G+ASIIGPL+TEHAKGGKCI
Sbjct: 301 WIRSLTKKYLNNPLTVDLVGDSDQKLADGITTYSIIADSYGRASIIGPLVTEHAKGGKCI 360

Query: 362 VFTQTKRDADRLAYAMARNFRCEALHGDISQSQRERTLSGFRDGHFNVLVATDVAARGLD 421
           VFTQTKRDADRL+YA+AR+F+CEALHGDISQSQRERTL+GFRDGHFN+LVATDVAARGLD
Sbjct: 361 VFTQTKRDADRLSYALARSFKCEALHGDISQSQRERTLAGFRDGHFNILVATDVAARGLD 420

Query: 422 IPNVDLVIHFELPNNTEIFVHRSGRTGRAGKKGSAILIYSQDQSRAVRMIEREVGCRFNE 481
           +PNVDL+IH+ELPNNTE FVHR+GRTGRAGKKGSAILIYSQDQSRAV++IEREVG RF E
Sbjct: 421 VPNVDLIIHYELPNNTETFVHRTGRTGRAGKKGSAILIYSQDQSRAVKIIEREVGSRFTE 480

Query: 482 LPKISVESGAHVDMFSG-GGQFSSFGGGGFRDRRMNDSGRFGG------QRGPSFGRSAG 541
           LP I+VE G+   MF G G +     GGG RDR  +  GR GG        G   GRS G
Sbjct: 481 LPSIAVERGS-ASMFEGIGSRSGGSFGGGMRDRGSSFGGRSGGGGYGGSSGGYGGGRSGG 540

Query: 542 YEN--------SGFRRSGGRDSFGQGGRNSEPSSG----GAGSFGSFGSGRSGGFGDFGS 596
             N        SGF   G R   G G   S  S G    G G  G   + RS GFGDFGS
Sbjct: 541 SSNRYSGDSDRSGFGSFGMRSPEGYGSDRSSQSGGRSSFGGGRSGGSSNNRSSGFGDFGS 600

[Close]
BLAST of CmoCh01G013830 vs. TAIR 10
Match: AT3G22310.1 (putative mitochondrial RNA helicase 1 )

HSP 1 Score: 674.9 bits (1740), Expect = 6.3e-194
Identity = 390/628 (62.10%), Postives = 458/628 (72.93%), Query Frame = 0 

Query: 2   MSSVLLRRS------AALAASRGRVSSTFLAPIANFLTSSVDVNGGAVPAAEFGRFSTTG 61
           M S +LRRS        LAAS   +++     +A    +  D+  GA         +   
Sbjct: 1   MISTVLRRSILGTSRRTLAASVTSINAALFHNLAPAAATVSDLANGAT--------NVKS 60

Query: 62  VTERALGFGFQSMGFHSASGPLGFKSSLVSRAEFAVEEY------------DDASSSKSG 121
           +   +  FG +   FH  S P  F+SS+VS A FA +EY             ++  S  G
Sbjct: 61  LPSNSSPFGVKVRDFHVKSVPSEFRSSIVSSAGFAAQEYAPSYENDGGIGDSESVGSSGG 120

Query: 122 DDGLEIGSLGIAPEIVSALAKKGITKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGI 181
            DGL I  LGI+PEIV AL  +GI KLFPIQ+AVLEPAM+GRDMIGRARTGTGKTLAFGI
Sbjct: 121 GDGLAIADLGISPEIVKALKGRGIEKLFPIQKAVLEPAMEGRDMIGRARTGTGKTLAFGI 180

Query: 182 PILDKIIQFNAKHGRGRYPLALVLAPTRELARQVEKEFQEAAPNLDTICVYGGAPISRQM 241
           PI+DKII+FNAKHGRG+ P  LVLAPTRELARQVEKEF+E+AP+LDTIC+YGG PI +QM
Sbjct: 181 PIIDKIIKFNAKHGRGKNPQCLVLAPTRELARQVEKEFRESAPSLDTICLYGGTPIGQQM 240

Query: 242 RQLDYGVDIAVGTPGRLIDLLNRGSLNLSEVQFVVLDEADQMLQVGFQEDVEKILERLPQ 301
           R+L+YG+D+AVGTPGR+IDL+ RG+LNLSEVQFVVLDEADQMLQVGF EDVE IL++LP 
Sbjct: 241 RELNYGIDVAVGTPGRIIDLMKRGALNLSEVQFVVLDEADQMLQVGFAEDVEIILQKLPA 300

Query: 302 KRQTMMFSATMPSWIRKLTQNYLTNPLTIDLVGDSDQKLADGISLFSIVSDMRGKASIIG 361
           KRQ+MMFSATMPSWIR LT+ YL NPLTIDLVGDSDQKLADGI+++SI +D  G+ASIIG
Sbjct: 301 KRQSMMFSATMPSWIRSLTKKYLNNPLTIDLVGDSDQKLADGITMYSIAADSYGRASIIG 360

Query: 362 PLITEHAKGGKCIVFTQTKRDADRLAYAMARNFRCEALHGDISQSQRERTLSGFRDGHFN 421
           PL+ EH KGGKCIVFTQTKRDADRLA+ +A++++CEALHGDISQ+QRERTL+GFRDG+F+
Sbjct: 361 PLVKEHGKGGKCIVFTQTKRDADRLAFGLAKSYKCEALHGDISQAQRERTLAGFRDGNFS 420

Query: 422 VLVATDVAARGLDIPNVDLVIHFELPNNTEIFVHRSGRTGRAGKKGSAILIYSQDQSRAV 481
           +LVATDVAARGLD+PNVDLVIH+ELPNNTE FVHR+GRTGRAGKKGSAILI+ QDQ+RAV
Sbjct: 421 ILVATDVAARGLDVPNVDLVIHYELPNNTETFVHRTGRTGRAGKKGSAILIHGQDQTRAV 480

Query: 482 RMIEREVGCRFNELPKISVESGAHVDMFSGGGQFS--SFGGGGFRDRRMNDSGRFGGQRG 541
           +MIE+EVG RFNELP I+VE G+   MF G G  S  SFGGG          G   G  G
Sbjct: 481 KMIEKEVGSRFNELPSIAVERGS-ASMFEGVGARSGGSFGGG-------RSGGGGYGSYG 540

Query: 542 PSFGRSAGYENSGFRRSGGRDSFGQGGRNSEPSSGGAGSFGSFGSGRSGGFGDFGSSSRS 601
            S GRS G    G+  S GR     GG  S   SGG+ S  S GS RS GFG FGS   S
Sbjct: 541 SSSGRSGGGSYGGYGGSSGRSG---GGGGSYGGSGGSSSRYSGGSDRSSGFGSFGSGGSS 600

Query: 602 GGFG---DFGGSGRSS--GFGDRNSKNS 605
           GGFG       SGRSS  GFG  + K S
Sbjct: 601 GGFGSDRSSQSSGRSSFGGFGSNDGKRS 609

[Close]
BLAST of CmoCh01G013830 vs. TAIR 10
Match: AT5G26742.1 (DEAD box RNA helicase (RH3) )

HSP 1 Score: 472.2 bits (1214), Expect = 6.2e-133
Identity = 238/388 (61.34%), Postives = 295/388 (76.03%), Query Frame = 0 

Query: 93  EYDDASSSKSGDDG--LEIGSLGIAPEIVSALAKKGITKLFPIQRAVLEPAMQGRDMIGR 152
           + D  +++   DDG  L I  L +   +  +L K+GIT LFPIQRAVL PA+QGRD+I R
Sbjct: 86  DLDGDNNNVEADDGEELAISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIAR 145

Query: 153 ARTGTGKTLAFGIPILDKIIQ----FNAKHGRGRYPLALVLAPTRELARQVEKEFQEAAP 212
           A+TGTGKTLAFGIPI+ ++ +    + A    GR P  LVLAPTRELA+QVEKE +E+AP
Sbjct: 146 AKTGTGKTLAFGIPIIKRLTEEAGDYTAFRRSGRLPKFLVLAPTRELAKQVEKEIKESAP 205

Query: 213 NLDTICVYGGAPISRQMRQLDYGVDIAVGTPGRLIDLLNRGSLNLSEVQFVVLDEADQML 272
            L T+CVYGG   + Q   L  GVD+ VGTPGR+IDL+   SL L EV+++VLDEADQML
Sbjct: 206 YLSTVCVYGGVSYTIQQSALTRGVDVVVGTPGRIIDLIEGRSLKLGEVEYLVLDEADQML 265

Query: 273 QVGFQEDVEKILERLPQKRQTMMFSATMPSWIRKLTQNYLTNPLTIDLVGDSDQKLADGI 332
            VGF+E VE ILE LP KRQ+M+FSATMP+W++KL + YL NPL IDLVGD D+KLA+GI
Sbjct: 266 AVGFEEAVESILENLPTKRQSMLFSATMPTWVKKLARKYLDNPLNIDLVGDQDEKLAEGI 325

Query: 333 SLFSIVSDMRGKASIIGPLITEHAKGGKCIVFTQTKRDADRLAYAMARNFRCEALHGDIS 392
            L++I +    K +I+  LIT +AKGGK IVFTQTKRDAD ++ A++ +   EALHGDIS
Sbjct: 326 KLYAIATTSTSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALSNSIATEALHGDIS 385

Query: 393 QSQRERTLSGFRDGHFNVLVATDVAARGLDIPNVDLVIHFELPNNTEIFVHRSGRTGRAG 452
           Q QRERTL+ FR G F VLVATDVA+RGLDIPNVDLVIH+ELPN+ E FVHRSGRTGRAG
Sbjct: 386 QHQRERTLNAFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAG 445

Query: 453 KKGSAILIYSQDQSRAVRMIEREVGCRF 475
           K+GSAIL+++  Q R VR +ER+VGC F
Sbjct: 446 KEGSAILMHTSSQKRTVRSLERDVGCHF 473

[Close]
BLAST of CmoCh01G013830 vs. TAIR 10
Match: AT5G26742.2 (DEAD box RNA helicase (RH3) )

HSP 1 Score: 472.2 bits (1214), Expect = 6.2e-133
Identity = 238/388 (61.34%), Postives = 295/388 (76.03%), Query Frame = 0 

Query: 93  EYDDASSSKSGDDG--LEIGSLGIAPEIVSALAKKGITKLFPIQRAVLEPAMQGRDMIGR 152
           + D  +++   DDG  L I  L +   +  +L K+GIT LFPIQRAVL PA+QGRD+I R
Sbjct: 86  DLDGDNNNVEADDGEELAISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIAR 145

Query: 153 ARTGTGKTLAFGIPILDKIIQ----FNAKHGRGRYPLALVLAPTRELARQVEKEFQEAAP 212
           A+TGTGKTLAFGIPI+ ++ +    + A    GR P  LVLAPTRELA+QVEKE +E+AP
Sbjct: 146 AKTGTGKTLAFGIPIIKRLTEEAGDYTAFRRSGRLPKFLVLAPTRELAKQVEKEIKESAP 205

Query: 213 NLDTICVYGGAPISRQMRQLDYGVDIAVGTPGRLIDLLNRGSLNLSEVQFVVLDEADQML 272
            L T+CVYGG   + Q   L  GVD+ VGTPGR+IDL+   SL L EV+++VLDEADQML
Sbjct: 206 YLSTVCVYGGVSYTIQQSALTRGVDVVVGTPGRIIDLIEGRSLKLGEVEYLVLDEADQML 265

Query: 273 QVGFQEDVEKILERLPQKRQTMMFSATMPSWIRKLTQNYLTNPLTIDLVGDSDQKLADGI 332
            VGF+E VE ILE LP KRQ+M+FSATMP+W++KL + YL NPL IDLVGD D+KLA+GI
Sbjct: 266 AVGFEEAVESILENLPTKRQSMLFSATMPTWVKKLARKYLDNPLNIDLVGDQDEKLAEGI 325

Query: 333 SLFSIVSDMRGKASIIGPLITEHAKGGKCIVFTQTKRDADRLAYAMARNFRCEALHGDIS 392
            L++I +    K +I+  LIT +AKGGK IVFTQTKRDAD ++ A++ +   EALHGDIS
Sbjct: 326 KLYAIATTSTSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALSNSIATEALHGDIS 385

Query: 393 QSQRERTLSGFRDGHFNVLVATDVAARGLDIPNVDLVIHFELPNNTEIFVHRSGRTGRAG 452
           Q QRERTL+ FR G F VLVATDVA+RGLDIPNVDLVIH+ELPN+ E FVHRSGRTGRAG
Sbjct: 386 QHQRERTLNAFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAG 445

Query: 453 KKGSAILIYSQDQSRAVRMIEREVGCRF 475
           K+GSAIL+++  Q R VR +ER+VGC F
Sbjct: 446 KEGSAILMHTSSQKRTVRSLERDVGCHF 473

[Close]
BLAST of CmoCh01G013830 vs. TAIR 10
Match: AT5G26742.3 (DEAD box RNA helicase (RH3) )

HSP 1 Score: 446.0 bits (1146), Expect = 4.8e-125
Identity = 221/344 (64.24%), Postives = 270/344 (78.49%), Query Frame = 0 

Query: 135 RAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKIIQ----FNAKHGRGRYPLALVLAPT 194
           RAVL PA+QGRD+I RA+TGTGKTLAFGIPI+ ++ +    + A    GR P  LVLAPT
Sbjct: 37  RAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRLTEEAGDYTAFRRSGRLPKFLVLAPT 96

Query: 195 RELARQVEKEFQEAAPNLDTICVYGGAPISRQMRQLDYGVDIAVGTPGRLIDLLNRGSLN 254
           RELA+QVEKE +E+AP L T+CVYGG   + Q   L  GVD+ VGTPGR+IDL+   SL 
Sbjct: 97  RELAKQVEKEIKESAPYLSTVCVYGGVSYTIQQSALTRGVDVVVGTPGRIIDLIEGRSLK 156

Query: 255 LSEVQFVVLDEADQMLQVGFQEDVEKILERLPQKRQTMMFSATMPSWIRKLTQNYLTNPL 314
           L EV+++VLDEADQML VGF+E VE ILE LP KRQ+M+FSATMP+W++KL + YL NPL
Sbjct: 157 LGEVEYLVLDEADQMLAVGFEEAVESILENLPTKRQSMLFSATMPTWVKKLARKYLDNPL 216

Query: 315 TIDLVGDSDQKLADGISLFSIVSDMRGKASIIGPLITEHAKGGKCIVFTQTKRDADRLAY 374
            IDLVGD D+KLA+GI L++I +    K +I+  LIT +AKGGK IVFTQTKRDAD ++ 
Sbjct: 217 NIDLVGDQDEKLAEGIKLYAIATTSTSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSL 276

Query: 375 AMARNFRCEALHGDISQSQRERTLSGFRDGHFNVLVATDVAARGLDIPNVDLVIHFELPN 434
           A++ +   EALHGDISQ QRERTL+ FR G F VLVATDVA+RGLDIPNVDLVIH+ELPN
Sbjct: 277 ALSNSIATEALHGDISQHQRERTLNAFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPN 336

Query: 435 NTEIFVHRSGRTGRAGKKGSAILIYSQDQSRAVRMIEREVGCRF 475
           + E FVHRSGRTGRAGK+GSAIL+++  Q R VR +ER+VGC F
Sbjct: 337 DPETFVHRSGRTGRAGKEGSAILMHTSSQKRTVRSLERDVGCHF 380

The following BLAST results are available for this feature:
BLAST of CmoCh01G013830 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9LUW55.2e-20164.68DEAD-box ATP-dependent RNA helicase 53, mitochondrial OS=Arabidopsis thaliana OX... [more]
Q9LUW68.9e-19362.10DEAD-box ATP-dependent RNA helicase 9, mitochondrial OS=Arabidopsis thaliana OX=... [more]
Q0ILZ43.5e-18161.09DEAD-box ATP-dependent RNA helicase 9 OS=Oryza sativa subsp. japonica OX=39947 G... [more]
Q0D8N02.7e-17358.14DEAD-box ATP-dependent RNA helicase 53 OS=Oryza sativa subsp. japonica OX=39947 ... [more]
Q0DM514.5e-13661.52DEAD-box ATP-dependent RNA helicase 3, chloroplastic OS=Oryza sativa subsp. japo... [more]
BLAST of CmoCh01G013830 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1FJ020.0e+00100.00DEAD-box ATP-dependent RNA helicase 53, mitochondrial-like OS=Cucurbita moschata... [more]
A0A6J1J2Y80.0e+0098.39DEAD-box ATP-dependent RNA helicase 53, mitochondrial-like isoform X2 OS=Cucurbi... [more]
A0A6J1IXE80.0e+0095.32DEAD-box ATP-dependent RNA helicase 53, mitochondrial-like isoform X1 OS=Cucurbi... [more]
A0A6J1C2092.4e-28185.35DEAD-box ATP-dependent RNA helicase 53-like OS=Momordica charantia OX=3673 GN=LO... [more]
A0A0A0KZ671.5e-27281.58Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G616790 PE=4 SV=1[more]
BLAST of CmoCh01G013830 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022940069.10.0e+00100.00DEAD-box ATP-dependent RNA helicase 53, mitochondrial-like [Cucurbita moschata][more]
KAG7037512.10.0e+0096.72DEAD-box ATP-dependent RNA helicase 53 [Cucurbita argyrosperma subsp. argyrosper... [more]
XP_023524742.10.0e+0096.10DEAD-box ATP-dependent RNA helicase 53, mitochondrial-like [Cucurbita pepo subsp... [more]
XP_022981753.10.0e+0098.39DEAD-box ATP-dependent RNA helicase 53, mitochondrial-like isoform X2 [Cucurbita... [more]
XP_022981751.10.0e+0095.32DEAD-box ATP-dependent RNA helicase 53, mitochondrial-like isoform X1 [Cucurbita... [more]
BLAST of CmoCh01G013830 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G22330.13.7e-20264.68putative mitochondrial RNA helicase 2 [more]
AT3G22310.16.3e-19462.10putative mitochondrial RNA helicase 1 [more]
AT5G26742.16.2e-13361.34DEAD box RNA helicase (RH3) [more]
AT5G26742.26.2e-13361.34DEAD box RNA helicase (RH3) [more]
AT5G26742.34.8e-12564.24DEAD box RNA helicase (RH3) [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001650Helicase, C-terminalSMARTSM00490helicmild6coord: 366..446
e-value: 6.7E-32
score: 122.0
IPR001650Helicase, C-terminalPFAMPF00271Helicase_Ccoord: 339..446
e-value: 2.6E-31
score: 108.2
IPR001650Helicase, C-terminalPROSITEPS51194HELICASE_CTERcoord: 341..485
score: 23.086895
IPR014001Helicase superfamily 1/2, ATP-binding domainSMARTSM00487ultradead3coord: 126..329
e-value: 1.8E-59
score: 213.6
IPR014001Helicase superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 138..312
score: 32.848217
IPR011545DEAD/DEAH box helicase domainPFAMPF00270DEADcoord: 131..300
e-value: 1.1E-49
score: 168.6
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 109..316
e-value: 3.7E-77
score: 260.4
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 330..490
e-value: 2.5E-51
score: 176.5
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 182..468
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 544..562
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 502..621
NoneNo IPR availablePANTHERPTHR47958:SF99DEAD-BOX ATP-DEPENDENT RNA HELICASE 53-LIKEcoord: 59..529
NoneNo IPR availablePANTHERPTHR47958ATP-DEPENDENT RNA HELICASE DBP3coord: 59..529
NoneNo IPR availableCDDcd00268DEADccoord: 118..313
e-value: 1.67163E-100
score: 302.439
NoneNo IPR availableCDDcd18787SF2_C_DEADcoord: 331..455
e-value: 6.75544E-54
score: 178.085
IPR014014RNA helicase, DEAD-box type, Q motifPROSITEPS51195Q_MOTIFcoord: 107..135
score: 8.546095

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh01G013830.1CmoCh01G013830.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000373 Group II intron splicing
biological_process GO:0006364 rRNA processing
cellular_component GO:0005737 cytoplasm
cellular_component GO:0005730 nucleolus
molecular_function GO:0005524 ATP binding
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0003723 RNA binding
molecular_function GO:0003724 RNA helicase activity
molecular_function GO:0003676 nucleic acid binding