CmoCh01G013610 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh01G013610
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
LocationCmo_Chr01: 10730609 .. 10732333 (+)
RNA-Seq ExpressionCmoCh01G013610
SyntenyCmoCh01G013610
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
CTACCACGAAATGAACCGCCGCTGCAAAAAGAAGCTTGCGCCACCATAGATTTGCGCAGTTGGAATCATGCCGCCGCCGTGGAGGTTGAAGATCGGGATTCTGTCGCTACGAGGGAGCTTGTTATAGCGCCTTTGGTTCTTGAGTCGCTTGCCGGTGAGCGGTTGTGGCTGTGCGTCGGGTTCGCCGACCACAAGATAGCATCATATTTAGCTCGTCGATTCCTTTTTCTTTCAATTTTAGTTCTATTTTAAAAAAAAAAACAATAATTATTTTGTTTATAATAAATAGACAATCCGATTTACAATAAAATATTTGAAAAATTAGGAACTAAAATGATAATTTTTTGGGTGATTAAAATCTTAAATAAATATTTAAAATGTCAGAATTACAAAATTTATTCAATAATTATGTGACTTCCAACTTTTAATTTTATATTTAATATATTTAAATTTTAAAAAAATTGGAAATAAAAAGATTTATCAAATATAAACATTTAAGTTTAGAGAATTATTATATATATATATATATATATATATATATATATAATATATATATATATATATATATATATATATTAATTTGTTTATTTATTTATTTAAGCTAATAACCTACTAGGCGTGTAACAAAAACCTACTTTGAGCGTGGGTTAAGTTTAGTTTAGATATTTTTGAAAAAGTTCATTTCGGTTATTTCTTAAACCGTTCATTTTAACTTGTGTTCTTTAAAAGCGTTCATTTTGGTTCTAACACTTTTATTTTTATTTTTTAAATTGCGATGTCCCACATTGGTTTGGAAGAAAACAAACGCGTTTTAAAGCCTTGAGGGAAAGTCGGAGAGGGACTGTCTTATGACCTTGTCGGCTCAGATCAGTAAACTACATGTCTTAGGAACAGTAACTACCTGTCACTATGCCGCTCGGCGGGATCAGTAAAAGGCCATGGCTCGTCCCACTAAGCCGAAAGAGGATAATATCTACTAGCGGTGGATATGAGACGTTACAAATGGTATTAGTGCCAGACATTGGACAATGTACCAGCTTTCTCGCTGTTTTTCCAAGGGGGGGATAGACATTAGGCAGTGTGCCGGTAAGAACGCTGGACCTCGAAGGGGGATGAATTTGGTGGCGGTCCCACATCGATTGGAGGAAGGAAAGAGTGTTCCCCAAAGGGGTAGGCACGAGGCGGTGTGCTAGTAGGGACGTTGAGCCCCGAAGGGGGTAGATTTAGTGGCGATCCCACATCGATTGGAGTAAGAAATGAGTGTTAACGAGCATGTTGGCCCTCAAAGGGGTGGATTTAATGGTGGTCCCACACGGATTGGAGACGTTCATTTTGATTCACATATTTTTAAAATTTGGAAAATAATGTAAATATTTTATTAAAATTATAAATTTTAAAGTATAATTTAATTAAAAGAAAAAAAAAAAGAAAAAAGAAAAAAAAGGACAGGCTTGAGATTTGAGCACAAAATATAAACAGAATTAGTGGAAGAAGGCAAGCAGTGTGGACACGTCTCCCCACAATGGCTTACCTTTGTTTATTTAGCGAATTAAAAATAGCCCCACTCACTCTCTTAACTTTACCTTTTCCATGTAATGTCTTCTCTCTCAAACATTCACTTTTCCATGTTTATTTGCAGAGCAGAGGCTCTGTCGTTGCCTTTCCTCTGCACCACCTGAGCTCAGCTGCATCACTGTTCTGTCTCTATATCTGTCTCAGAGTTAA

mRNA sequence

CTACCACGAAATGAACCGCCGCTGCAAAAAGAAGCTTGCGCCACCATAGATTTGCGCAGTTGGAATCATGCCGCCGCCGTGGAGGTTGAAGATCGGGATTCTGTCGCTACGAGGGAGCTTGTTATAGCGCCTTTGGTTCTTGAGTCGCTTGCCGAGCAGAGGCTCTGTCGTTGCCTTTCCTCTGCACCACCTGAGCTCAGCTGCATCACTGTTCTGTCTCTATATCTGTCTCAGAGTTAA

Coding sequence (CDS)

CTACCACGAAATGAACCGCCGCTGCAAAAAGAAGCTTGCGCCACCATAGATTTGCGCAGTTGGAATCATGCCGCCGCCGTGGAGGTTGAAGATCGGGATTCTGTCGCTACGAGGGAGCTTGTTATAGCGCCTTTGGTTCTTGAGTCGCTTGCCGAGCAGAGGCTCTGTCGTTGCCTTTCCTCTGCACCACCTGAGCTCAGCTGCATCACTGTTCTGTCTCTATATCTGTCTCAGAGTTAA

Protein sequence

LPRNEPPLQKEACATIDLRSWNHAAAVEVEDRDSVATRELVIAPLVLESLAEQRLCRCLSSAPPELSCITVLSLYLSQS
Homology
[Close]
BLAST of CmoCh01G013610 vs. NCBI nr
Match: KAG6607973.1 (Protein NARROW LEAF 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 97.1 bits (240), Expect = 7.5e-17
Identity = 49/51 (96.08%), Postives = 49/51 (96.08%), Query Frame = 0 

Query: 1  LPRNEPPLQKEACATIDLRSWNHAAAVEVEDRDSVATRELVIAPLVLESLA 52
          LPRNEPPLQKEACATIDLR WN AAAVEVEDRDSVATRELVIAPLVLESLA
Sbjct: 12 LPRNEPPLQKEACATIDLRCWNRAAAVEVEDRDSVATRELVIAPLVLESLA 62

The following BLAST results are available for this feature:
BLAST of CmoCh01G013610 vs.
Match NameE-valueIdentityDescription
BLAST of CmoCh01G013610 vs.
Match NameE-valueIdentityDescription
BLAST of CmoCh01G013610 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6607973.17.5e-1796.08Protein NARROW LEAF 1, partial [Cucurbita argyrosperma subsp. sororia][more]
BLAST of CmoCh01G013610 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh01G013610.1CmoCh01G013610.1mRNA