CmoCh01G013500 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATAAGAAAATAAAAGAAACAAATAAATAAGGAGCGGAAACATCGCGTTGTCGGAGGAGAAGAAATCGACAACAAGAGGGCTCGCCGAAGCAGAAGAACGGAAGCGAAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAAAGAAGAGGTCGGAAGATAATTCGAATGGCAGAGGTGAAGCCCGCCGATTCCACCACCACTATCAACGCTTCTCCTAACCATTCCAATCCTGATTACCCGACCGACCGCCCAGTTCGAGTTTACGCCGATGGGATCTACGATCTCTTCCATTTCGGTCACGCTCGCTCTCTCGAGCAAGCCAAGAAATCGTCCGTTTCTTCTCCTTTTCCTTAATTTCTCTTCGCTTTCTTGGTTATTCTTCATGTGCGGCATCTGTGACTGTAGTTTCCATGATTTTTTTGGTTTCTGATACTTTTCGATTTAAGTAATTTAGTTCCTGTGTTTCGCCGGGTCGTAGGAATTGTTGTTTTCTCTTATTGTGATTTTTTTTTCTTTTTCTGATTCATTAGCCTGCTTGATTGTTCTTAATTTTCAGGTTTGCTAACTTGTTTTCACTTGTCCGTGAACTTCTTCTGTTGGGAGAATTGATTTGTTGAATTGACGAGCTGTAATTATTGATCCTTCTTGTAATTTCAGATTCCCGAATACTTATTTGTTAGTTGGATGTTGCAATGATGAGACTACCCACAGTCTTAAAGGGAAAACTGTTATGAATGAAGCTGAACGATATGAATCTCTTCGCCATTGCAAGTATGACTTTTCTCTATTCCATGTATTTTTCTTTACTGGGGCTTTTGAATCTTGAAACATTGATATGTATAGATGTGCTTTTGATACCTACAAACGCTAGTTAGAATGCCTGTTTGAATCCTTTAAATTCAAGTGTAGCTATGATGGACGTGGAATCAATCTTAGTCGCACCGATTCTTCAACGTGATTTTATTTATTTGCTCCTTGTTTCCCCCTCCCTTTTCCGCAGGTGGGTGGATGAAGTGATTCCTGATGCACCCTGGGTGATCTCTCAAGAATTTATTGACAAGCACAAGATTGACTTTGTGGCCCACGATTCTCTTCCGTAAGGATATTATATACTTTATCTCAGTGAACCAAGAGGGTCAAGTAACTTTTGGGCAATGGAGTTTATTTCCTTTTCCACATTTATCTGCATTTCTACCCATCTAATTAGTATAGATTGGATGGTAAAGTGTCTCAGGAAGAGCTTCAATTAGTTGGTCCATGGTATCTATCTGTTCACATTGAATTTATTTGTTAATTCTGTTTTAAATGACCTATGTCATCCTTTCTCTGCCTCGATACAGTTATGCTGATGCTACCGGAGCTGGGAAGGATGTTTATGAATTTGTAAGTTCAGAAGATGGGTTTATCCATTCGATCCACTTGGTGCTTAAGAACATACAATTTCATAGATGGGAACTTTTCCTTTGTAGGTTAAAAAAATTGGAAAGTTCAAGGAAACAAAAAGGACAGAAGGAATATCAACTTCAGACATTATCATGAGGATTGTCAAAGATTATAATCAATATGTTCTGCGTAATTTGGACCGTGGTTATTCGAGGAAAGAGCTTGGAGTCAGCTTTGTGAAGGCATGATATTTTATCTACATTGACCCTTTTTATAACGATAATGCTTATCCTGCTAATCAGCAAAGCTTGATTATATTGATTTTGTTTATTAACAAGCAACTCAATCTTGATGTATTCAATTACCAGGAAAAGCGGTTAAGAGTGAATATGAGATTGAAGAAATTACAGGAGAAAGTGAAGGAACATCAAGAAAAAGTGGGAGAAAAGGTACCCATATCTCATATCTTTATAATAGTCCTATGGATGTGGTAGTTGGGGAGTTCAGATTAGATTATCTGCTTTATAATTCCTCTTATTTCAGGCTATGGGATAGTTGTACCTTAGGTGTAACAAACTTTCTATATGCACAAAAGCTGGTCCGAACACTTACTAATATAACAAAAAAAAGAAAAAAAAAAAGAAAGAAAGAGGAAGCTGGGCAGTCCACTTGCAATCTTGCAAATTTGTTACTAGAATTTGCCTAAAGGCGTGTCTTATGTTTTGTGCATTTTTGCTATGACTTGATAGCTAACCATAAGTTTCAGGAAAAAAGCTAGAGATCTTCACATTAGAGAAAGTCAATATTATTCGATGAAATCCATATTTCTACGGTTTTATTTTTAATAAACTTAGCTATGCACTGTGTGCTTTTGGGCCCACCTTTTTCACCTTGCCTGGTATGTGCATCTTAAGATGCCTAAATGTTTTTACGACCCATAATTATTTGGAACGATCAGATACTTCACTGTCCTTGCACATATGCGAATATGATTTCGTGACCAATTGAAGAACTTAGATGAGATGATTCTATGCTACATTTTGTATCTTCCTGAAATGACTTGAATTAAGACACTAAAAGAGCAAAACACGAAGGAACAACTTGTTGTAAATGTATCTATGGGGTTTGTCTGCCTTCAGTTGATTTTCGAACTTACTCCAAAAATAATGTGGTTTGTGCGGCTGCCTTTCACATTTCTCTCTGTTTTATTTCATTTTGTGATATATTTTCTTAGAAAAGGATTCTAATTGTACATTCATGAAGTTGTCTTTTCAAGTAAGAAAAGTTGACTTTTGAGCCAGCTATCTGCCATGCAAGCATTACAATTCTTTTGGGTTCTTTTTTTGAGCATGTGAAACGATGCCAGATACAGCTGTGCTGATATCAAAGCATGGAATCCTAGTATTTCAATGTATTCACAGACATATTCTTGCTTTTCAATTCTTTCTTAAGCTTGGAAATCCCAATTTTTGTTTTTGTACTAATTCAAGCATTGAAGTTTTTATGGGTAATTGATATTTAGCCCGCCTAATATAGCAAGTTGATTACTTCTTGGGTGTATTCTATTCTCCCCATTGAAGTGAAAAAAGTCCTTTTTTCCACTTCAGTGCTAGCGAGGACTTTATCTGGTTTTGTTAGACCTACAATTATATTTTAGGCTTTATTTACCTCGATCTAATTATGGAGGCAGGATATTTAATTATTGTTTTTTGTTGAAAATGATTGTTCTGGATACTGCAGATTCAAACAGTGGCAAAAACTGCCGGCATGCACAGGAATGAATGGGTGGAAAATGCTGATCGCTGGGTGGCTGGATTTCTAGAGATGTTTGAAGAAGGTTGTCATAAGATGGTAAGTTAATGCACGGATTATCCTGTTCTTCATTTATGTGGCAAGTTTTGAAGTAGATAAGAAAAAGAAAGCATACAAAAACGTACATGGTTTTGTGAATCTTGAACTAAAACAAAAGGGTTAAATCTGAAACATCACGTGTGTATTTAGGGCACGGCCATCAGAGACCGAATTCAAGAGCGGTTAATGGGGGCACAGCAGCAAAAATATCTAGAAAATGGCAAGGACAGTGACTCAGACCTCGAAGAAGAATATTATTACGACGACGACGACGAAGAATATTACGAAGACGACTTCTACGAAGAATTCGAGAAAGACGAGAAGAAAAGGTAGACACGTATTTACATCAAGTTTGAATACATGTCACATGCATAATTTGATGCTTGTTCATGGATTCTACAGTAGTAGTATGTTTCTGCTATATGTTTAGGCGCAGACAGTAAACGTAAACCATAACAGCTAATTTGCCAAAGCAAAAAAGGAAAACAAAAGAGGGGCACTTGGCGGTGAGTTCAGGCACCAATGTGGCTTTTGTGACCCTTTTTAAGATATGTGTTTGTGCATATAGGTTGAAATTTTTTCCCTTGAAGCTTGTAAAACAGGTCGTTTCTTTTCGGGTTTTGTTTGTGAATCGTCGTAATTGAAGAGTTTTGAAGCTTTGGGTTTCCTGTTTGTATGTAATGTAAGAGTGATAAATATGGTTTGATATTATTATATGTATCTTTCTCTTTGTTTTTGGTCATTCTGTAAAGGAGAATTGAAAGGGAATTTGTGAAAAGCATAAGATTAGTGGGATACTTGAAAGGAGGTTGTTTGCTTACCTAA ATAAGAAAATAAAAGAAACAAATAAATAAGGAGCGGAAACATCGCGTTGTCGGAGGAGAAGAAATCGACAACAAGAGGGCTCGCCGAAGCAGAAGAACGGAAGCGAAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAAAGAAGAGGTCGGAAGATAATTCGAATGGCAGAGGTGAAGCCCGCCGATTCCACCACCACTATCAACGCTTCTCCTAACCATTCCAATCCTGATTACCCGACCGACCGCCCAGTTCGAGTTTACGCCGATGGGATCTACGATCTCTTCCATTTCGGTCACGCTCGCTCTCTCGAGCAAGCCAAGAAATCATTCCCGAATACTTATTTGTTAGTTGGATGTTGCAATGATGAGACTACCCACAGTCTTAAAGGGAAAACTGTTATGAATGAAGCTGAACGATATGAATCTCTTCGCCATTGCAAGTGGGTGGATGAAGTGATTCCTGATGCACCCTGGGTGATCTCTCAAGAATTTATTGACAAGCACAAGATTGACTTTGTGGCCCACGATTCTCTTCCTTATGCTGATGCTACCGGAGCTGGGAAGGATGTTTATGAATTTGTTAAAAAAATTGGAAAGTTCAAGGAAACAAAAAGGACAGAAGGAATATCAACTTCAGACATTATCATGAGGATTGTCAAAGATTATAATCAATATGTTCTGCGTAATTTGGACCGTGGTTATTCGAGGAAAGAGCTTGGAGTCAGCTTTCAACTCAATCTTGATGTATTCAATTACCAGGAAAAGCGGTTAAGAGTGAATATGAGATTGAAGAAATTACAGGAGAAAGTGAAGGAACATCAAGAAAAAGTGGGAGAAAAGATTCAAACAGTGGCAAAAACTGCCGGCATGCACAGGAATGAATGGGTGGAAAATGCTGATCGCTGGGTGGCTGGATTTCTAGAGATGTTTGAAGAAGGTTGTCATAAGATGGGCACGGCCATCAGAGACCGAATTCAAGAGCGGTTAATGGGGGCACAGCAGCAAAAATATCTAGAAAATGGCAAGGACAGTGACTCAGACCTCGAAGAAGAATATTATTACGACGACGACGACGAAGAATATTACGAAGACGACTTCTACGAAGAATTCGAGAAAGACGAGAAGAAAAGGAGAATTGAAAGGGAATTTGTGAAAAGCATAAGATTAGTGGGATACTTGAAAGGAGGTTGTTTGCTTACCTAA ATGGCAGAGGTGAAGCCCGCCGATTCCACCACCACTATCAACGCTTCTCCTAACCATTCCAATCCTGATTACCCGACCGACCGCCCAGTTCGAGTTTACGCCGATGGGATCTACGATCTCTTCCATTTCGGTCACGCTCGCTCTCTCGAGCAAGCCAAGAAATCATTCCCGAATACTTATTTGTTAGTTGGATGTTGCAATGATGAGACTACCCACAGTCTTAAAGGGAAAACTGTTATGAATGAAGCTGAACGATATGAATCTCTTCGCCATTGCAAGTGGGTGGATGAAGTGATTCCTGATGCACCCTGGGTGATCTCTCAAGAATTTATTGACAAGCACAAGATTGACTTTGTGGCCCACGATTCTCTTCCTTATGCTGATGCTACCGGAGCTGGGAAGGATGTTTATGAATTTGTTAAAAAAATTGGAAAGTTCAAGGAAACAAAAAGGACAGAAGGAATATCAACTTCAGACATTATCATGAGGATTGTCAAAGATTATAATCAATATGTTCTGCGTAATTTGGACCGTGGTTATTCGAGGAAAGAGCTTGGAGTCAGCTTTCAACTCAATCTTGATGTATTCAATTACCAGGAAAAGCGGTTAAGAGTGAATATGAGATTGAAGAAATTACAGGAGAAAGTGAAGGAACATCAAGAAAAAGTGGGAGAAAAGATTCAAACAGTGGCAAAAACTGCCGGCATGCACAGGAATGAATGGGTGGAAAATGCTGATCGCTGGGTGGCTGGATTTCTAGAGATGTTTGAAGAAGGTTGTCATAAGATGGGCACGGCCATCAGAGACCGAATTCAAGAGCGGTTAATGGGGGCACAGCAGCAAAAATATCTAGAAAATGGCAAGGACAGTGACTCAGACCTCGAAGAAGAATATTATTACGACGACGACGACGAAGAATATTACGAAGACGACTTCTACGAAGAATTCGAGAAAGACGAGAAGAAAAGGAGAATTGAAAGGGAATTTGTGAAAAGCATAAGATTAGTGGGATACTTGAAAGGAGGTTGTTTGCTTACCTAA MAEVKPADSTTTINASPNHSNPDYPTDRPVRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHSLKGKTVMNEAERYESLRHCKWVDEVIPDAPWVISQEFIDKHKIDFVAHDSLPYADATGAGKDVYEFVKKIGKFKETKRTEGISTSDIIMRIVKDYNQYVLRNLDRGYSRKELGVSFQLNLDVFNYQEKRLRVNMRLKKLQEKVKEHQEKVGEKIQTVAKTAGMHRNEWVENADRWVAGFLEMFEEGCHKMGTAIRDRIQERLMGAQQQKYLENGKDSDSDLEEEYYYDDDDEEYYEDDFYEEFEKDEKKRRIEREFVKSIRLVGYLKGGCLLT Homology
BLAST of CmoCh01G013500 vs. ExPASy Swiss-Prot
Match: Q9ZV56 (Choline-phosphate cytidylyltransferase 1 OS=Arabidopsis thaliana OX=3702 GN=CCT1 PE=1 SV=1) HSP 1 Score: 439.1 bits (1128), Expect = 4.6e-122 Identity = 230/323 (71.21%), Postives = 266/323 (82.35%), Query Frame = 0
BLAST of CmoCh01G013500 vs. ExPASy Swiss-Prot
Match: F4JJE0 (Choline-phosphate cytidylyltransferase 2 OS=Arabidopsis thaliana OX=3702 GN=CCT2 PE=1 SV=1) HSP 1 Score: 433.3 bits (1113), Expect = 2.5e-120 Identity = 220/289 (76.12%), Postives = 245/289 (84.78%), Query Frame = 0
BLAST of CmoCh01G013500 vs. ExPASy Swiss-Prot
Match: Q9Y5K3 (Choline-phosphate cytidylyltransferase B OS=Homo sapiens OX=9606 GN=PCYT1B PE=1 SV=1) HSP 1 Score: 260.8 bits (665), Expect = 2.2e-68 Identity = 130/232 (56.03%), Postives = 165/232 (71.12%), Query Frame = 0
BLAST of CmoCh01G013500 vs. ExPASy Swiss-Prot
Match: Q811Q9 (Choline-phosphate cytidylyltransferase B OS=Mus musculus OX=10090 GN=Pcyt1b PE=1 SV=2) HSP 1 Score: 259.6 bits (662), Expect = 5.0e-68 Identity = 129/232 (55.60%), Postives = 165/232 (71.12%), Query Frame = 0
BLAST of CmoCh01G013500 vs. ExPASy Swiss-Prot
Match: Q9QZC4 (Choline-phosphate cytidylyltransferase B OS=Rattus norvegicus OX=10116 GN=Pcyt1b PE=1 SV=1) HSP 1 Score: 259.6 bits (662), Expect = 5.0e-68 Identity = 129/232 (55.60%), Postives = 165/232 (71.12%), Query Frame = 0
BLAST of CmoCh01G013500 vs. ExPASy TrEMBL
Match: A0A6J1FJ47 (choline-phosphate cytidylyltransferase 2-like OS=Cucurbita moschata OX=3662 GN=LOC111445839 PE=3 SV=1) HSP 1 Score: 623.2 bits (1606), Expect = 6.3e-175 Identity = 313/323 (96.90%), Postives = 314/323 (97.21%), Query Frame = 0
BLAST of CmoCh01G013500 vs. ExPASy TrEMBL
Match: A0A6J1J168 (choline-phosphate cytidylyltransferase 2-like OS=Cucurbita maxima OX=3661 GN=LOC111480356 PE=3 SV=1) HSP 1 Score: 614.8 bits (1584), Expect = 2.3e-172 Identity = 311/324 (95.99%), Postives = 313/324 (96.60%), Query Frame = 0
BLAST of CmoCh01G013500 vs. ExPASy TrEMBL
Match: A0A1S3CM33 (choline-phosphate cytidylyltransferase 2-like OS=Cucumis melo OX=3656 GN=LOC103502481 PE=3 SV=1) HSP 1 Score: 573.9 bits (1478), Expect = 4.4e-160 Identity = 296/336 (88.10%), Postives = 303/336 (90.18%), Query Frame = 0
BLAST of CmoCh01G013500 vs. ExPASy TrEMBL
Match: A0A6J1FCK6 (choline-phosphate cytidylyltransferase 2-like OS=Cucurbita moschata OX=3662 GN=LOC111442868 PE=3 SV=1) HSP 1 Score: 567.0 bits (1460), Expect = 5.4e-158 Identity = 295/340 (86.76%), Postives = 303/340 (89.12%), Query Frame = 0
BLAST of CmoCh01G013500 vs. ExPASy TrEMBL
Match: A0A6J1IPQ3 (choline-phosphate cytidylyltransferase 2-like OS=Cucurbita maxima OX=3661 GN=LOC111477078 PE=3 SV=1) HSP 1 Score: 566.6 bits (1459), Expect = 7.0e-158 Identity = 294/340 (86.47%), Postives = 303/340 (89.12%), Query Frame = 0
BLAST of CmoCh01G013500 vs. NCBI nr
Match: XP_022940119.1 (choline-phosphate cytidylyltransferase 2-like [Cucurbita moschata]) HSP 1 Score: 623.2 bits (1606), Expect = 1.3e-174 Identity = 313/323 (96.90%), Postives = 314/323 (97.21%), Query Frame = 0
BLAST of CmoCh01G013500 vs. NCBI nr
Match: XP_022981108.1 (choline-phosphate cytidylyltransferase 2-like [Cucurbita maxima]) HSP 1 Score: 614.8 bits (1584), Expect = 4.7e-172 Identity = 311/324 (95.99%), Postives = 313/324 (96.60%), Query Frame = 0
BLAST of CmoCh01G013500 vs. NCBI nr
Match: KAG6607965.1 (Choline-phosphate cytidylyltransferase 1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 614.0 bits (1582), Expect = 7.9e-172 Identity = 311/323 (96.28%), Postives = 312/323 (96.59%), Query Frame = 0
BLAST of CmoCh01G013500 vs. NCBI nr
Match: XP_023523876.1 (choline-phosphate cytidylyltransferase 1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 612.5 bits (1578), Expect = 2.3e-171 Identity = 310/324 (95.68%), Postives = 313/324 (96.60%), Query Frame = 0
BLAST of CmoCh01G013500 vs. NCBI nr
Match: XP_004145998.1 (choline-phosphate cytidylyltransferase 2 isoform X1 [Cucumis sativus] >KGN55480.2 hypothetical protein Csa_012685 [Cucumis sativus]) HSP 1 Score: 575.5 bits (1482), Expect = 3.1e-160 Identity = 295/340 (86.76%), Postives = 303/340 (89.12%), Query Frame = 0
BLAST of CmoCh01G013500 vs. TAIR 10
Match: AT2G32260.1 (phosphorylcholine cytidylyltransferase ) HSP 1 Score: 439.1 bits (1128), Expect = 3.3e-123 Identity = 230/323 (71.21%), Postives = 266/323 (82.35%), Query Frame = 0
BLAST of CmoCh01G013500 vs. TAIR 10
Match: AT4G15130.1 (phosphorylcholine cytidylyltransferase2 ) HSP 1 Score: 433.3 bits (1113), Expect = 1.8e-121 Identity = 220/289 (76.12%), Postives = 245/289 (84.78%), Query Frame = 0
BLAST of CmoCh01G013500 vs. TAIR 10
Match: AT2G38670.1 (phosphorylethanolamine cytidylyltransferase 1 ) HSP 1 Score: 114.4 bits (285), Expect = 1.8e-25 Identity = 62/166 (37.35%), Postives = 96/166 (57.83%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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