CmoCh01G012750 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh01G012750
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	ethylene-responsive transcription factor 4
Location	Cmo_Chr01: 10190722 .. 10191300 (-)
RNA-Seq Expression	CmoCh01G012750
Synteny	CmoCh01G012750

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGCCGGAGACCGATCTACTTCAACCGCCGCCGTTGAGATCCGGTACAGAGGTGTTAGAAAGAGGCCATGGGGTCGTTACGCAGCGGAAATCCGCGACCCTCGCAAAAAAACTAGGGTTTGGCTTGGCACCTTCAACACGGCGGAGGAAGCTGCACGTGCTTACGACTCAGCGGCGCGTGAATTCCGAGGCGCTAATGCCAAAACCAACTTCCCAACTCCGAACGAATATCTCGTCGACGACAACAACAACAACAAGTTCCGTAGATCCGCTTGCAGTAGTCCCAGCGAGAGCAGCACCGTGGACTCCTCTTCCGCTCCATCCCCGACGGATGCTTCCCTCACTCGCTTCCTCGATGGCAGCCACCCTCCAGCCATTTCCCGTCCAATCTTCTTCTTTGACGCGTTCGCTCAGGCGGAGAAGATGAACGACTTTCGCCGGACTGTAACCGTCGCTGTTGCCGGCGGATCGGCGAGCGACTCCGATTCATCATCCGTAGTTGATTTCGACGATGATTCACAAAAATCACGGCCGTTTGATTTTGACCTGAATCTTCCGGCGGTGGAAGTTGCCTGA

mRNA sequence

ATGGCTGCCGGAGACCGATCTACTTCAACCGCCGCCGTTGAGATCCGGTACAGAGGTGTTAGAAAGAGGCCATGGGGTCGTTACGCAGCGGAAATCCGCGACCCTCGCAAAAAAACTAGGGTTTGGCTTGGCACCTTCAACACGGCGGAGGAAGCTGCACGTGCTTACGACTCAGCGGCGCGTGAATTCCGAGGCGCTAATGCCAAAACCAACTTCCCAACTCCGAACGAATATCTCGTCGACGACAACAACAACAACAAGTTCCGTAGATCCGCTTGCAGTAGTCCCAGCGAGAGCAGCACCGTGGACTCCTCTTCCGCTCCATCCCCGACGGATGCTTCCCTCACTCGCTTCCTCGATGGCAGCCACCCTCCAGCCATTTCCCGTCCAATCTTCTTCTTTGACGCGTTCGCTCAGGCGGAGAAGATGAACGACTTTCGCCGGACTGTAACCGTCGCTGTTGCCGGCGGATCGGCGAGCGACTCCGATTCATCATCCGTAGTTGATTTCGACGATGATTCACAAAAATCACGGCCGTTTGATTTTGACCTGAATCTTCCGGCGGTGGAAGTTGCCTGA

Coding sequence (CDS)

ATGGCTGCCGGAGACCGATCTACTTCAACCGCCGCCGTTGAGATCCGGTACAGAGGTGTTAGAAAGAGGCCATGGGGTCGTTACGCAGCGGAAATCCGCGACCCTCGCAAAAAAACTAGGGTTTGGCTTGGCACCTTCAACACGGCGGAGGAAGCTGCACGTGCTTACGACTCAGCGGCGCGTGAATTCCGAGGCGCTAATGCCAAAACCAACTTCCCAACTCCGAACGAATATCTCGTCGACGACAACAACAACAACAAGTTCCGTAGATCCGCTTGCAGTAGTCCCAGCGAGAGCAGCACCGTGGACTCCTCTTCCGCTCCATCCCCGACGGATGCTTCCCTCACTCGCTTCCTCGATGGCAGCCACCCTCCAGCCATTTCCCGTCCAATCTTCTTCTTTGACGCGTTCGCTCAGGCGGAGAAGATGAACGACTTTCGCCGGACTGTAACCGTCGCTGTTGCCGGCGGATCGGCGAGCGACTCCGATTCATCATCCGTAGTTGATTTCGACGATGATTCACAAAAATCACGGCCGTTTGATTTTGACCTGAATCTTCCGGCGGTGGAAGTTGCCTGA

Protein sequence

MAAGDRSTSTAAVEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAARAYDSAAREFRGANAKTNFPTPNEYLVDDNNNNKFRRSACSSPSESSTVDSSSAPSPTDASLTRFLDGSHPPAISRPIFFFDAFAQAEKMNDFRRTVTVAVAGGSASDSDSSSVVDFDDDSQKSRPFDFDLNLPAVEVA

Homology

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BLAST of CmoCh01G012750 vs. ExPASy Swiss-Prot
Match: O80340 (Ethylene-responsive transcription factor 4 OS=Arabidopsis thaliana OX=3702 GN=ERF4 PE=1 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 6.9e-35
Identity = 108/214 (50.47%), Postives = 125/214 (58.41%), Query Frame = 0


Query: 3   AGDRSTSTAAVEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAARAYDSAARE 62
           A    T   A EIRYRGVRKRPWGRYAAEIRDP KKTRVWLGTF+TAEEAARAYD+AAR+
Sbjct: 11  ATTNQTHNNAKEIRYRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEEAARAYDTAARD 70

Query: 63  FRGANAKTNFPTPNEYLVDDNNNNKFRRSACSSPSESSTVDSSSAPSPTDASLTRFLDGS 122
           FRGA AKTNFPT  E L D      F R    SPS+SST+D +S P+    S T    G+
Sbjct: 71  FRGAKAKTNFPTFLE-LSDQKVPTGFAR----SPSQSSTLDCASPPTLVVPSATA---GN 130

Query: 123 HPPAI-----------------SRPIFFFDAF-------AQAEKMNDFRRTVTVAVAG-- 182
            PP +                 SRP++F D          Q   +    R+  V VA   
Sbjct: 131 VPPQLELSLGGGGGGSCYQIPMSRPVYFLDLMGIGNVGRGQPPPVTSAFRSPVVHVATKM 190

Query: 183 --GSASDSDSSSVVDFDDDSQK-SRPFDFDLNLP 188
             G+ SDSDSSSVVDF+   +K S+  D DLNLP
Sbjct: 191 ACGAQSDSDSSSVVDFEGGMEKRSQLLDLDLNLP 216

[Close]

BLAST of CmoCh01G012750 vs. ExPASy Swiss-Prot
Match: Q9MAI5 (Ethylene-responsive transcription factor 8 OS=Arabidopsis thaliana OX=3702 GN=ERF8 PE=1 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 3.4e-26
Identity = 87/185 (47.03%), Postives = 109/185 (58.92%), Query Frame = 0


Query: 9   STAAVEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAARAYDSAAREFRGANA 68
           S AA EIRYRGVRKRPWGRYAAEIRDP KKTRVWLGTF+TA++AARAYD+AAR+FRG  A
Sbjct: 23  SNAAKEIRYRGVRKRPWGRYAAEIRDPVKKTRVWLGTFDTAQQAARAYDAAARDFRGVKA 82

Query: 69  KTNFPTPNEYLVDDNNNNKFRRSACSSPSESST-VDSSSA-----PSPTDASLTRFLDGS 128
           KTNF                     SSP++SST VDS +A     P   + SL       
Sbjct: 83  KTNFGV----------------IVGSSPTQSSTVVDSPTAARFITPPHLELSLGGGGACR 142

Query: 129 HPPAISRPIFFFDAFAQAEKMNDFRRTVTVAVAGGSASDSDSSSVVDFDDDSQK-SRPFD 187
               +  P+++++       M  + +  T     G  S+S++SSVVDF+  + K S P D
Sbjct: 143 RKIPLVHPVYYYN-------MATYPKMTTC----GVQSESETSSVVDFEGGAGKISPPLD 180

[Close]

BLAST of CmoCh01G012750 vs. ExPASy Swiss-Prot
Match: Q40477 (Ethylene-responsive transcription factor 4 OS=Nicotiana tabacum OX=4097 GN=ERF4 PE=1 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 1.0e-25
Identity = 70/114 (61.40%), Postives = 79/114 (69.30%), Query Frame = 0


Query: 14  EIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAARAYDSAAREFRGANAKTNFP 73
           E+ YRGVRKRPWGRYAAEIRDP KK+RVWLGTF+TAEEAA+AYD+AAREFRG  AKTNFP
Sbjct: 24  EVHYRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAEEAAKAYDTAAREFRGPKAKTNFP 83

Query: 74  TPNEYLVDDNNNNKFRRSACSSPSESSTVDSSS------AP--SPTDASLTRFL 120
           +P E                 SPS SSTV+SSS      AP  +P +  LTR L
Sbjct: 84  SPTEN---------------QSPSHSSTVESSSGENGVHAPPHAPLELDLTRRL 122

[Close]

BLAST of CmoCh01G012750 vs. ExPASy Swiss-Prot
Match: Q9FE67 (Ethylene-responsive transcription factor 9 OS=Arabidopsis thaliana OX=3702 GN=ERF9 PE=1 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 4.9e-25
Identity = 58/79 (73.42%), Postives = 65/79 (82.28%), Query Frame = 0


Query: 9   STAAVEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAARAYDSAAREFRGANA 68
           +T   E+ +RGVRKRPWGRYAAEIRDP KKTRVWLGTF+TAEEAARAYD+AAREFRG+ A
Sbjct: 25  TTMRKEVHFRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEEAARAYDTAAREFRGSKA 84

Query: 69  KTNFPTPNE-YLVDDNNNN 87
           KTNFP P E   V+D   N
Sbjct: 85  KTNFPLPGESTTVNDGGEN 103

[Close]

BLAST of CmoCh01G012750 vs. ExPASy Swiss-Prot
Match: Q9LW49 (Ethylene-responsive transcription factor 4 OS=Nicotiana sylvestris OX=4096 GN=ERF4 PE=2 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 2.5e-24
Identity = 92/224 (41.07%), Postives = 118/224 (52.68%), Query Frame = 0


Query: 4   GDRSTSTAAVEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAARAYDSAAREF 63
           G    +    E+ YRGVRKRPWGRYAAEIRDP KK+RVWLGTF+TAEEAA+AYD+AAREF
Sbjct: 14  GGNVKTNGVKEVHYRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAEEAAKAYDTAAREF 73

Query: 64  RGANAKTNFPTPNEYLVDDNNNNKFRRSACSSPSESSTVDSSS------AP--SPTDASL 123
           RG  AKTNFP P+E                 S S SST++SSS      AP  +P +  L
Sbjct: 74  RGPKAKTNFPLPSEN---------------QSTSHSSTMESSSGETGIHAPPHAPLELDL 133

Query: 124 TRFL-----DGS---------------HPPAIS-----RPIFFFDAFAQAEKMNDFR--R 183
           TR L     DG                  P ++     +P+  FD+  +   +N  +   
Sbjct: 134 TRRLGSVAADGGDNCRRSGEVGYPIFHQQPTVAVLPNGQPVLLFDSLWRPGVVNRPQPYH 193

Query: 184 TVTVAV------AGGSASDSDSSSVVDFDDDSQKSRPFDFDLNL 187
            + +A+      AG   + SDSSSVV+ ++     R  D DLNL
Sbjct: 194 VMPMAMGFNGVNAGVDPTVSDSSSVVE-ENQYDGKRGIDLDLNL 221

[Close]

BLAST of CmoCh01G012750 vs. ExPASy TrEMBL
Match: A0A6J1FTH9 (ethylene-responsive transcription factor 4 OS=Cucurbita moschata OX=3662 GN=LOC111446690 PE=4 SV=1)

HSP 1 Score: 371.7 bits (953), Expect = 1.8e-99
Identity = 192/192 (100.00%), Postives = 192/192 (100.00%), Query Frame = 0


Query: 1   MAAGDRSTSTAAVEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAARAYDSAA 60
           MAAGDRSTSTAAVEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAARAYDSAA
Sbjct: 1   MAAGDRSTSTAAVEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAARAYDSAA 60

Query: 61  REFRGANAKTNFPTPNEYLVDDNNNNKFRRSACSSPSESSTVDSSSAPSPTDASLTRFLD 120
           REFRGANAKTNFPTPNEYLVDDNNNNKFRRSACSSPSESSTVDSSSAPSPTDASLTRFLD
Sbjct: 61  REFRGANAKTNFPTPNEYLVDDNNNNKFRRSACSSPSESSTVDSSSAPSPTDASLTRFLD 120

Query: 121 GSHPPAISRPIFFFDAFAQAEKMNDFRRTVTVAVAGGSASDSDSSSVVDFDDDSQKSRPF 180
           GSHPPAISRPIFFFDAFAQAEKMNDFRRTVTVAVAGGSASDSDSSSVVDFDDDSQKSRPF
Sbjct: 121 GSHPPAISRPIFFFDAFAQAEKMNDFRRTVTVAVAGGSASDSDSSSVVDFDDDSQKSRPF 180

Query: 181 DFDLNLPAVEVA 193
           DFDLNLPAVEVA
Sbjct: 181 DFDLNLPAVEVA 192

[Close]

BLAST of CmoCh01G012750 vs. ExPASy TrEMBL
Match: A0A6J1IXY7 (ethylene-responsive transcription factor 4 OS=Cucurbita maxima OX=3661 GN=LOC111480939 PE=4 SV=1)

HSP 1 Score: 357.1 bits (915), Expect = 4.7e-95
Identity = 186/192 (96.88%), Postives = 188/192 (97.92%), Query Frame = 0


Query: 1   MAAGDRSTSTAAVEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAARAYDSAA 60
           MAAGDRSTSTA VEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAARAYD+AA
Sbjct: 1   MAAGDRSTSTAVVEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAARAYDTAA 60

Query: 61  REFRGANAKTNFPTPNEYLVDDNNNNKFRRSACSSPSESSTVDSSSAPSPTDASLTRFLD 120
           REFRGANAKTNFPTPNEYLVDD NNNKFRRS CSSPSESSTVDSSSAPSPTDASLTRFLD
Sbjct: 61  REFRGANAKTNFPTPNEYLVDD-NNNKFRRSTCSSPSESSTVDSSSAPSPTDASLTRFLD 120

Query: 121 GSHPPAISRPIFFFDAFAQAEKMNDFRRTVTVAVAGGSASDSDSSSVVDFDDDSQKSRPF 180
           GSHPPAISRPIFFFDAFAQAEKM+DF RTVTVAVAGGSASDSDSSSVVDFDDDSQKSRPF
Sbjct: 121 GSHPPAISRPIFFFDAFAQAEKMSDFHRTVTVAVAGGSASDSDSSSVVDFDDDSQKSRPF 180

Query: 181 DFDLNLPAVEVA 193
           DFDLNLPAVEVA
Sbjct: 181 DFDLNLPAVEVA 191

[Close]

BLAST of CmoCh01G012750 vs. ExPASy TrEMBL
Match: A0A5A7VEL4 (Ethylene-responsive transcription factor 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G001630 PE=4 SV=1)

HSP 1 Score: 265.8 bits (678), Expect = 1.4e-67
Identity = 152/196 (77.55%), Postives = 167/196 (85.20%), Query Frame = 0


Query: 1   MAAGDRSTSTA---AVEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAARAYD 60
           MAAGDRSTS A   + EIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAARAYD
Sbjct: 1   MAAGDRSTSAAPPNSKEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAARAYD 60

Query: 61  SAAREFRGANAKTNFPTPNEYLVDDNNNNKFRRSAC-SSPSESSTVDSSSAPSPTDASLT 120
           +AAREFRGANAKTNFP  N++L+ DNN+  F +SAC SSPS SSTV+SSS PSPT ++  
Sbjct: 61  TAAREFRGANAKTNFPVQNDFLIVDNNHTNFHKSACSSSPSHSSTVESSS-PSPTPSN-- 120

Query: 121 RFLDGS-HPPAISRPIFFFDAFAQAEKMNDFRRTVTVAVAGGSASDSDSSSVVDFDDDSQ 180
            +LDG  H P ISRPIFFFDAFAQAEK++DFRRTVT A AG  ASDSDSSSVVDF D ++
Sbjct: 121 PYLDGGIHAPGISRPIFFFDAFAQAEKISDFRRTVTAAAAG--ASDSDSSSVVDF-DTTR 180

Query: 181 KSRPFDFDLNLPAVEV 192
           KSRP DFDLNLPAVEV
Sbjct: 181 KSRPLDFDLNLPAVEV 190

[Close]

BLAST of CmoCh01G012750 vs. ExPASy TrEMBL
Match: A0A6J1CD65 (ethylene-responsive transcription factor 4 OS=Momordica charantia OX=3673 GN=LOC111010466 PE=4 SV=1)

HSP 1 Score: 265.8 bits (678), Expect = 1.4e-67
Identity = 150/198 (75.76%), Postives = 165/198 (83.33%), Query Frame = 0


Query: 1   MAAGDRSTSTAAV---EIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAARAYD 60
           MAAGDR TS++A    EIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAARAYD
Sbjct: 1   MAAGDRPTSSSAAVTPEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAARAYD 60

Query: 61  SAAREFRGANAKTNFPTPNEYLVDDNNNNKFRRSACSSPSESSTVDSSS---APSPTDAS 120
           +AAREFRG NAKTNFP P E+ V    N+ +R+SACSSPS+SSTVDSSS   AP P D +
Sbjct: 61  TAAREFRGGNAKTNFPVPAEFAVLVGENH-YRKSACSSPSQSSTVDSSSPSPAPPPVDPA 120

Query: 121 LTRFLDGSHPPAISRPIFFFDAFAQAEKMNDFRRTVTVAVAGGSASDSDSSSVVDFDDDS 180
           LT F+DG    AISRPI+FFDAFAQAEK +DF RTVTVAVAGGSASDSDSSSVV   + +
Sbjct: 121 LTHFIDGG---AISRPIYFFDAFAQAEKTSDFHRTVTVAVAGGSASDSDSSSVVVDFNHT 180

Query: 181 QKSRPFDFDLNLPAVEVA 193
           +K RP DFDLNLPAVEVA
Sbjct: 181 RKPRPLDFDLNLPAVEVA 194

[Close]

BLAST of CmoCh01G012750 vs. ExPASy TrEMBL
Match: A0A1S3CLM9 (ethylene-responsive transcription factor 4 OS=Cucumis melo OX=3656 GN=LOC103501853 PE=4 SV=1)

HSP 1 Score: 265.8 bits (678), Expect = 1.4e-67
Identity = 152/196 (77.55%), Postives = 167/196 (85.20%), Query Frame = 0


Query: 1   MAAGDRSTSTA---AVEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAARAYD 60
           MAAGDRSTS A   + EIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAARAYD
Sbjct: 1   MAAGDRSTSAAPPNSKEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAARAYD 60

Query: 61  SAAREFRGANAKTNFPTPNEYLVDDNNNNKFRRSAC-SSPSESSTVDSSSAPSPTDASLT 120
           +AAREFRGANAKTNFP  N++L+ DNN+  F +SAC SSPS SSTV+SSS PSPT ++  
Sbjct: 61  TAAREFRGANAKTNFPVQNDFLIVDNNHTNFHKSACSSSPSHSSTVESSS-PSPTPSN-- 120

Query: 121 RFLDGS-HPPAISRPIFFFDAFAQAEKMNDFRRTVTVAVAGGSASDSDSSSVVDFDDDSQ 180
            +LDG  H P ISRPIFFFDAFAQAEK++DFRRTVT A AG  ASDSDSSSVVDF D ++
Sbjct: 121 PYLDGGIHAPGISRPIFFFDAFAQAEKISDFRRTVTAAAAG--ASDSDSSSVVDF-DTTR 180

Query: 181 KSRPFDFDLNLPAVEV 192
           KSRP DFDLNLPAVEV
Sbjct: 181 KSRPLDFDLNLPAVEV 190

[Close]

BLAST of CmoCh01G012750 vs. NCBI nr
Match: XP_022941385.1 (ethylene-responsive transcription factor 4 [Cucurbita moschata] >KAG7037418.1 Ethylene-responsive transcription factor 4, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 371.7 bits (953), Expect = 3.8e-99
Identity = 192/192 (100.00%), Postives = 192/192 (100.00%), Query Frame = 0


Query: 1   MAAGDRSTSTAAVEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAARAYDSAA 60
           MAAGDRSTSTAAVEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAARAYDSAA
Sbjct: 1   MAAGDRSTSTAAVEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAARAYDSAA 60

Query: 61  REFRGANAKTNFPTPNEYLVDDNNNNKFRRSACSSPSESSTVDSSSAPSPTDASLTRFLD 120
           REFRGANAKTNFPTPNEYLVDDNNNNKFRRSACSSPSESSTVDSSSAPSPTDASLTRFLD
Sbjct: 61  REFRGANAKTNFPTPNEYLVDDNNNNKFRRSACSSPSESSTVDSSSAPSPTDASLTRFLD 120

Query: 121 GSHPPAISRPIFFFDAFAQAEKMNDFRRTVTVAVAGGSASDSDSSSVVDFDDDSQKSRPF 180
           GSHPPAISRPIFFFDAFAQAEKMNDFRRTVTVAVAGGSASDSDSSSVVDFDDDSQKSRPF
Sbjct: 121 GSHPPAISRPIFFFDAFAQAEKMNDFRRTVTVAVAGGSASDSDSSSVVDFDDDSQKSRPF 180

Query: 181 DFDLNLPAVEVA 193
           DFDLNLPAVEVA
Sbjct: 181 DFDLNLPAVEVA 192

[Close]

BLAST of CmoCh01G012750 vs. NCBI nr
Match: KAG6607891.1 (Ethylene-responsive transcription factor 4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 365.2 bits (936), Expect = 3.6e-97
Identity = 191/192 (99.48%), Postives = 191/192 (99.48%), Query Frame = 0


Query: 1   MAAGDRSTSTAAVEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAARAYDSAA 60
           MAAGDRSTSTAAVEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAARAYDSAA
Sbjct: 1   MAAGDRSTSTAAVEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAARAYDSAA 60

Query: 61  REFRGANAKTNFPTPNEYLVDDNNNNKFRRSACSSPSESSTVDSSSAPSPTDASLTRFLD 120
           REFRGANAKTNFPTPNEYLVDD NNNKFRRSACSSPSESSTVDSSSAPSPTDASLTRFLD
Sbjct: 61  REFRGANAKTNFPTPNEYLVDD-NNNKFRRSACSSPSESSTVDSSSAPSPTDASLTRFLD 120

Query: 121 GSHPPAISRPIFFFDAFAQAEKMNDFRRTVTVAVAGGSASDSDSSSVVDFDDDSQKSRPF 180
           GSHPPAISRPIFFFDAFAQAEKMNDFRRTVTVAVAGGSASDSDSSSVVDFDDDSQKSRPF
Sbjct: 121 GSHPPAISRPIFFFDAFAQAEKMNDFRRTVTVAVAGGSASDSDSSSVVDFDDDSQKSRPF 180

Query: 181 DFDLNLPAVEVA 193
           DFDLNLPAVEVA
Sbjct: 181 DFDLNLPAVEVA 191

[Close]

BLAST of CmoCh01G012750 vs. NCBI nr
Match: XP_023525528.1 (ethylene-responsive transcription factor 4-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 364.4 bits (934), Expect = 6.1e-97
Identity = 188/192 (97.92%), Postives = 191/192 (99.48%), Query Frame = 0


Query: 1   MAAGDRSTSTAAVEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAARAYDSAA 60
           MAAG RSTSTAAVEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAARAYD+AA
Sbjct: 1   MAAGLRSTSTAAVEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAARAYDAAA 60

Query: 61  REFRGANAKTNFPTPNEYLVDDNNNNKFRRSACSSPSESSTVDSSSAPSPTDASLTRFLD 120
           REFRGANAKTNFPTPNEYL+DDNNNNKFRRSACSSPSESSTVDSSSAPSPTDASLTRFLD
Sbjct: 61  REFRGANAKTNFPTPNEYLIDDNNNNKFRRSACSSPSESSTVDSSSAPSPTDASLTRFLD 120

Query: 121 GSHPPAISRPIFFFDAFAQAEKMNDFRRTVTVAVAGGSASDSDSSSVVDFDDDSQKSRPF 180
           GSHPPAISRPIFFFDAFAQAEKM+DFRRTVTVAVAGGSASDSDSSSVVDFDDDSQKSRPF
Sbjct: 121 GSHPPAISRPIFFFDAFAQAEKMSDFRRTVTVAVAGGSASDSDSSSVVDFDDDSQKSRPF 180

Query: 181 DFDLNLPAVEVA 193
           DFDLNLPAVEVA
Sbjct: 181 DFDLNLPAVEVA 192

[Close]

BLAST of CmoCh01G012750 vs. NCBI nr
Match: XP_022981946.1 (ethylene-responsive transcription factor 4 [Cucurbita maxima])

HSP 1 Score: 357.1 bits (915), Expect = 9.7e-95
Identity = 186/192 (96.88%), Postives = 188/192 (97.92%), Query Frame = 0


Query: 1   MAAGDRSTSTAAVEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAARAYDSAA 60
           MAAGDRSTSTA VEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAARAYD+AA
Sbjct: 1   MAAGDRSTSTAVVEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAARAYDTAA 60

Query: 61  REFRGANAKTNFPTPNEYLVDDNNNNKFRRSACSSPSESSTVDSSSAPSPTDASLTRFLD 120
           REFRGANAKTNFPTPNEYLVDD NNNKFRRS CSSPSESSTVDSSSAPSPTDASLTRFLD
Sbjct: 61  REFRGANAKTNFPTPNEYLVDD-NNNKFRRSTCSSPSESSTVDSSSAPSPTDASLTRFLD 120

Query: 121 GSHPPAISRPIFFFDAFAQAEKMNDFRRTVTVAVAGGSASDSDSSSVVDFDDDSQKSRPF 180
           GSHPPAISRPIFFFDAFAQAEKM+DF RTVTVAVAGGSASDSDSSSVVDFDDDSQKSRPF
Sbjct: 121 GSHPPAISRPIFFFDAFAQAEKMSDFHRTVTVAVAGGSASDSDSSSVVDFDDDSQKSRPF 180

Query: 181 DFDLNLPAVEVA 193
           DFDLNLPAVEVA
Sbjct: 181 DFDLNLPAVEVA 191

[Close]

BLAST of CmoCh01G012750 vs. NCBI nr
Match: XP_038897001.1 (ethylene-responsive transcription factor 4 [Benincasa hispida])

HSP 1 Score: 273.5 bits (698), Expect = 1.4e-69
Identity = 157/203 (77.34%), Postives = 173/203 (85.22%), Query Frame = 0


Query: 1   MAAGDRSTSTAAV-------EIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAA 60
           M AGDRSTSTA+        EIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAA
Sbjct: 1   MVAGDRSTSTASTAAPPNSKEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAA 60

Query: 61  RAYDSAAREFRGANAKTNFPTPNEYLVDDNNNNKFRRSACS-SPSESSTVDSSS-APSPT 120
           RAYD+AAREFRGANAKTNFP  NE+L+ DNNNN F +SACS SPS+SSTVDSSS +P+P+
Sbjct: 61  RAYDTAAREFRGANAKTNFPIQNEFLMVDNNNN-FHKSACSTSPSQSSTVDSSSPSPAPS 120

Query: 121 DASLTRFLDGS-HPPAISRPIFFFDAFAQAEKMNDFRRTVT--VAVAGGSASDSDSSSVV 180
           D SLT FL+ S H P ISRPIFFFDAFAQAE++++FRR VT  VA AGGS SDSDSSSVV
Sbjct: 121 DPSLTHFLNSSNHAPTISRPIFFFDAFAQAERISEFRRNVTNAVAGAGGSVSDSDSSSVV 180

Query: 181 DFDDDSQKSRPFDFDLNLPAVEV 192
           DF D ++KSRP DFDLNLPAVEV
Sbjct: 181 DF-DTTRKSRPLDFDLNLPAVEV 201

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BLAST of CmoCh01G012750 vs. TAIR 10
Match: AT3G15210.1 (ethylene responsive element binding factor 4 )

HSP 1 Score: 148.7 bits (374), Expect = 4.9e-36
Identity = 108/214 (50.47%), Postives = 125/214 (58.41%), Query Frame = 0


Query: 3   AGDRSTSTAAVEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAARAYDSAARE 62
           A    T   A EIRYRGVRKRPWGRYAAEIRDP KKTRVWLGTF+TAEEAARAYD+AAR+
Sbjct: 11  ATTNQTHNNAKEIRYRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEEAARAYDTAARD 70

Query: 63  FRGANAKTNFPTPNEYLVDDNNNNKFRRSACSSPSESSTVDSSSAPSPTDASLTRFLDGS 122
           FRGA AKTNFPT  E L D      F R    SPS+SST+D +S P+    S T    G+
Sbjct: 71  FRGAKAKTNFPTFLE-LSDQKVPTGFAR----SPSQSSTLDCASPPTLVVPSATA---GN 130

Query: 123 HPPAI-----------------SRPIFFFDAF-------AQAEKMNDFRRTVTVAVAG-- 182
            PP +                 SRP++F D          Q   +    R+  V VA   
Sbjct: 131 VPPQLELSLGGGGGGSCYQIPMSRPVYFLDLMGIGNVGRGQPPPVTSAFRSPVVHVATKM 190

Query: 183 --GSASDSDSSSVVDFDDDSQK-SRPFDFDLNLP 188
             G+ SDSDSSSVVDF+   +K S+  D DLNLP
Sbjct: 191 ACGAQSDSDSSSVVDFEGGMEKRSQLLDLDLNLP 216

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BLAST of CmoCh01G012750 vs. TAIR 10
Match: AT1G53170.1 (ethylene response factor 8 )

HSP 1 Score: 119.8 bits (299), Expect = 2.4e-27
Identity = 87/185 (47.03%), Postives = 109/185 (58.92%), Query Frame = 0


Query: 9   STAAVEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAARAYDSAAREFRGANA 68
           S AA EIRYRGVRKRPWGRYAAEIRDP KKTRVWLGTF+TA++AARAYD+AAR+FRG  A
Sbjct: 23  SNAAKEIRYRGVRKRPWGRYAAEIRDPVKKTRVWLGTFDTAQQAARAYDAAARDFRGVKA 82

Query: 69  KTNFPTPNEYLVDDNNNNKFRRSACSSPSESST-VDSSSA-----PSPTDASLTRFLDGS 128
           KTNF                     SSP++SST VDS +A     P   + SL       
Sbjct: 83  KTNFGV----------------IVGSSPTQSSTVVDSPTAARFITPPHLELSLGGGGACR 142

Query: 129 HPPAISRPIFFFDAFAQAEKMNDFRRTVTVAVAGGSASDSDSSSVVDFDDDSQK-SRPFD 187
               +  P+++++       M  + +  T     G  S+S++SSVVDF+  + K S P D
Sbjct: 143 RKIPLVHPVYYYN-------MATYPKMTTC----GVQSESETSSVVDFEGGAGKISPPLD 180

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BLAST of CmoCh01G012750 vs. TAIR 10
Match: AT5G44210.1 (erf domain protein 9 )

HSP 1 Score: 115.9 bits (289), Expect = 3.5e-26
Identity = 58/79 (73.42%), Postives = 65/79 (82.28%), Query Frame = 0


Query: 9   STAAVEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAARAYDSAAREFRGANA 68
           +T   E+ +RGVRKRPWGRYAAEIRDP KKTRVWLGTF+TAEEAARAYD+AAREFRG+ A
Sbjct: 25  TTMRKEVHFRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEEAARAYDTAAREFRGSKA 84

Query: 69  KTNFPTPNE-YLVDDNNNN 87
           KTNFP P E   V+D   N
Sbjct: 85  KTNFPLPGESTTVNDGGEN 103

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BLAST of CmoCh01G012750 vs. TAIR 10
Match: AT1G50640.1 (ethylene responsive element binding factor 3 )

HSP 1 Score: 109.8 bits (273), Expect = 2.5e-24
Identity = 85/208 (40.87%), Postives = 105/208 (50.48%), Query Frame = 0


Query: 14  EIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAARAYDSAAREFRGANAKTNF- 73
           EIR+RGVRKRPWGR+AAEIRDP KK RVWLGTF++AEEAARAYDSAAR  RG  AKTNF 
Sbjct: 25  EIRFRGVRKRPWGRFAAEIRDPWKKARVWLGTFDSAEEAARAYDSAARNLRGPKAKTNFP 84

Query: 74  ------PTPNEYLVDDNNNNKFR-------------------RSACSSPSESSTVDSSSA 133
                 P PN       N N+ +                    +  +S S SSTV+S S 
Sbjct: 85  IDSSSPPPPNLRFNQIRNQNQNQVDPFMDHRLFTDHQQQFPIVNRPTSSSMSSTVESFSG 144

Query: 134 PSPTDASLTRFLDGSHPPAISRPIFFFDAFAQAEKMNDFRRTVTVAVAGGSASDSDSSSV 191
           P PT          +  PA ++                + RT  V      +    SSSV
Sbjct: 145 PRPT----------TMKPATTK---------------RYPRTPPVVPEDCHSDCDSSSSV 204

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BLAST of CmoCh01G012750 vs. TAIR 10
Match: AT3G20310.1 (ethylene response factor 7 )

HSP 1 Score: 107.8 bits (268), Expect = 9.6e-24
Identity = 84/218 (38.53%), Postives = 109/218 (50.00%), Query Frame = 0


Query: 14  EIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAARAYDSAAREFRGANAKTNFP 73
           E RYRGVRKRPWGR+AAEIRDP KK+RVWLGTF++A +AARAYD+AAR  RG  AKTNFP
Sbjct: 24  EPRYRGVRKRPWGRFAAEIRDPLKKSRVWLGTFDSAVDAARAYDTAARNLRGPKAKTNFP 83

Query: 74  ---------TPNEYLVDDN--------------------NNNKFRR-------SACSSPS 133
                     P  YL + N                        F+        S  +S S
Sbjct: 84  IDCSPSSPLQPLTYLHNQNLCSPPVIQNQIDPFMDHRLYGGGNFQEQQQQQIISRPASSS 143

Query: 134 ESSTVDSSSAPSPTDASLTRFLDGSHPPAISRPIFFFDAFAQAEKMNDFRRTVTVAVAGG 191
            SSTV S S P P +A+       +   ++++P+           +  + RT  VA    
Sbjct: 144 MSSTVKSCSGPRPMEAA-------AASSSVAKPL---------HAIKRYPRTPPVAPEDC 203

The following BLAST results are available for this feature:

BLAST of CmoCh01G012750 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O80340	6.9e-35	50.47	Ethylene-responsive transcription factor 4 OS=Arabidopsis thaliana OX=3702 GN=ER...	[more]
Q9MAI5	3.4e-26	47.03	Ethylene-responsive transcription factor 8 OS=Arabidopsis thaliana OX=3702 GN=ER...	[more]
Q40477	1.0e-25	61.40	Ethylene-responsive transcription factor 4 OS=Nicotiana tabacum OX=4097 GN=ERF4 ...	[more]
Q9FE67	4.9e-25	73.42	Ethylene-responsive transcription factor 9 OS=Arabidopsis thaliana OX=3702 GN=ER...	[more]
Q9LW49	2.5e-24	41.07	Ethylene-responsive transcription factor 4 OS=Nicotiana sylvestris OX=4096 GN=ER...	[more]

BLAST of CmoCh01G012750 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FTH9	1.8e-99	100.00	ethylene-responsive transcription factor 4 OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A6J1IXY7	4.7e-95	96.88	ethylene-responsive transcription factor 4 OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]
A0A5A7VEL4	1.4e-67	77.55	Ethylene-responsive transcription factor 4 OS=Cucumis melo var. makuwa OX=119469...	[more]
A0A6J1CD65	1.4e-67	75.76	ethylene-responsive transcription factor 4 OS=Momordica charantia OX=3673 GN=LOC...	[more]
A0A1S3CLM9	1.4e-67	77.55	ethylene-responsive transcription factor 4 OS=Cucumis melo OX=3656 GN=LOC1035018...	[more]

BLAST of CmoCh01G012750 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022941385.1	3.8e-99	100.00	ethylene-responsive transcription factor 4 [Cucurbita moschata] >KAG7037418.1 Et...	[more]
KAG6607891.1	3.6e-97	99.48	Ethylene-responsive transcription factor 4, partial [Cucurbita argyrosperma subs...	[more]
XP_023525528.1	6.1e-97	97.92	ethylene-responsive transcription factor 4-like [Cucurbita pepo subsp. pepo]	[more]
XP_022981946.1	9.7e-95	96.88	ethylene-responsive transcription factor 4 [Cucurbita maxima]	[more]
XP_038897001.1	1.4e-69	77.34	ethylene-responsive transcription factor 4 [Benincasa hispida]	[more]

BLAST of CmoCh01G012750 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G15210.1	4.9e-36	50.47	ethylene responsive element binding factor 4	[more]
AT1G53170.1	2.4e-27	47.03	ethylene response factor 8	[more]
AT5G44210.1	3.5e-26	73.42	erf domain protein 9	[more]
AT1G50640.1	2.5e-24	40.87	ethylene responsive element binding factor 3	[more]
AT3G20310.1	9.6e-24	38.53	ethylene response factor 7	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 39..55 score: 74.65 coord: 17..28 score: 66.67
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 16..79 e-value: 8.0E-37 score: 138.3
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 16..65 e-value: 1.6E-14 score: 53.8
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 16..73 score: 24.434111
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 16..73 e-value: 2.35068E-30 score: 103.891
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 15..74 e-value: 1.9E-28 score: 100.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 69..116
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 157..179
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 67..120
None	No IPR available	PANTHER	PTHR31677	AP2 DOMAIN CLASS TRANSCRIPTION FACTOR	coord: 7..114
None	No IPR available	PANTHER	PTHR31677	AP2 DOMAIN CLASS TRANSCRIPTION FACTOR	coord: 125..180
None	No IPR available	PANTHER	PTHR31677:SF156	ERF FAMILY PROTEIN	coord: 125..180 coord: 7..114
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 16..74

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh01G012750.1	CmoCh01G012750.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity