CmoCh01G012730 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh01G012730
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
Descriptionpre-mRNA-splicing factor CWC22 homolog isoform X2
LocationCmo_Chr01: 10183071 .. 10185932 (-)
RNA-Seq ExpressionCmoCh01G012730
SyntenyCmoCh01G012730
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAGTTTTAATTTTAAATTGTTTTTATAAAGAAAACTTAAAAAAGAAAAACAATTAATTCAAAAAGTGGACACGAATACGGAGAAAGAGTGTGAAGGACAGCGGTTGTCAACGAACAGAGAAACGGACCTCCTCCAGTTTGCGATGAGATCCGTCGGAAACAGAGCAAACCCTTCATCAACCTCCAATACCTTCACTTTTCTAATTTCCCAACCCTAATTCCCTCATTCAATTTGATTCTTCTCTTTTTGCTTTCAATTTTCCCCTTTTTATCTGTTTTTTCGTTCTTCTCCCTGGTAATTGCAGGTTAAATCCCGATGGGAAAGTTCTCTTCTCGCAAGAAGGGGCGTTCCAAGACTTCTTCATCCCAGGTACTCTCCCTCTCTCTCTCTCTCTCTCTCTCACACACACACACACACACACGGGTAATGTTCTAAGATTATGCTGTAGTTTGGCTTATGAATTCACGAACATATCTGGGAAATCTTTGCTTGGTCGATTTGTATGCTTGAATTTTGAGTTTTTGTGTATGAGCTTCTTCTTCGTCTTTCACTTTTTTAGTTCTGCTTTCCGCTGGCAATTGGTAAATGTGATATTGGTATTGTGGTTGCGGTTTAAAATATGAATGTTTTCTCCATCTCTTGCCTCTCTTACCTCATATACGTTTGTTTTGATGCCGATGTGAATTTGTTTTGCGTCCTTTTCACCTTTTTGGCTCAAACCATGAAGAGAAGTAGGAGAAAGAGTAGGAGTAGTAGGAAACTGAAGTCCATGCGGTATCGCCATGATTCTCCCTCTGGCTCTGACAATGATTCTGAAAGCTCAACTTCATTGTCTTCTTCTAGCACGGAGGATGACGAAAAAGTGGGAAGATCTCGATCCAAGATGCGTAAGAATGCTAAAAAGAGAGCCAAGAAGCGATCTCATGACCGTCAAAGAAGGGATTACTCCCCTCATCCCAGAAAGAGGAAGCATTCAAAGAGAGACGAGTGTTGTGAGATGAAGAAGAGCAATAAAAAGAAGCGTAAACGAGATGCGAGTGTTCGTGCCACAAGTAGTGACTCTTTGAGCTGCTCGACTTGTGGAGATGGGAGTACAACCAGCAATGAGAGGGAAATCGATAGGCGTAAGGGCAGGTCTAGAAAGAGGAAAGAAAATATGGGGAAGATTGAAAGGAGTCGGTATTGGTCAAAGAGTCATTCGCCATGCTCTTTATGTAGTGAAGGTAGTGATCATCAGAATGAGGTTGAGAATGTCTGTTATGTTGAAAATAACTTTAGACGACTAAGATCTGTAATCGTTGTAGTTGGAGAGGAAGATAAATTAGAGACGTTTGATGGGAATGAACTACAAGAAAACGTCACGCATCAACCTGATCATGACCACCCTTCTTTTGGGGATATAAACAGAAATGATGGGATGAGTAATAGAGAATTAGATAATCTTATATCTGAAGAGGCACCAGTGATTATAACTGACAATAGAAACTCTATAGTTGTGAAGGATGATGGAGTTCAAAATGAAGGAAGCAACAATAACCATGGAGGATCAACTCATGACCATCCTTTATATGAAAGAAAGAATGGTTGTTCTGTAAACACCGACGACACAAACTGTATCGACTTAGAGTCGATTTTAAGACAGAGGGCTTTGGAAAACTTAAGAAAGTACAAACGGGTGCTCCCAAGGAATGTGGAAACTCCTGCTAATTACGAAGTCGACAATAGTAATGATGCGAAGCAACTGGACTCCCCTGTCTCTAAGTTGGTTCACGTGACTTCCCCTAGGGATGAGGCTGGGATAAATGGTCACAGGTTCTCTAGACAAGGTGGAGGGAACGCTGTAAATTCAATGATAATTGAAAATGGTGTTAAATCTACCGATGAAATGGACTCGGCCGTTGCATCTACGTATGATCCTGTCTATTCTTCACAGCACCTGGGTAAGATTTCCAATGGAAGCAATGATATGAATGAACTGAAGCAGCATATTTCGTCAGTAGACCAGGAGGTTGTAAATGATAGTATTTGCCATATGGCAGATGCAGATATTTGTCCAACAACTAACAGAAGCAATTTGGTTATTGCAGCTTTGAAGCCCGAGTCGAATGTTGATTCTCTTACCGAGCAGGCATCTGCCTCTCAGGAATCTATCCAAACAAAGCCATCTAAATCCGACATGGGCGACGGTGAAACCACTCAAACTCAGACCCAGATGAGGAACAATGATGTTCAAAACATTGGTGATGGTTTCGGATCTTCAGCTCACAAGCCATCATCTTCTTCTTCCCTTAATTCTATTTCAGGAGAAAGTCTCTTGAACGATTCCAGACACGAGAGTGGTGAAGGCTCACAGTTCGAACAGAAAACAATGTCGGTAAAGCGGGGTGGTGAAATGGTGCAGGTGAGAATATTGAGTACTGACTAAATTTATATATTCAGCAGGGAGTATAATTGTACTAGTTTTGTTAAGAACTTGGAACGGATCTGCAAATATTCATTTCAGGTTAACTACAAGGTGTACATTCCAAAGAGAGCTCCTGGTTTGAGTAGGAGGCAACTCAAGCGGTGACTTAAGATCCATGATTTTGCAGCCTTGTAGGATGCTCCTGTTGCTTGCCATTCCAAAGATTGTGAAGTTTTGGATTAGAATTTTCCATTCGCTTTCTGTGCGAAGGATCTATAAAGCCTTGAAATATGAACAATAATTAGTGCAGCCAATTGGTAGCATTTGTCTGTTAACTTTTCCACGAGAATGATCAATATGACCATTTGATCAAACGAGAAAACTTGGTGATGTTCGGAGCCAGTGATGATTCACACAGCTTGACAAATCTATCTTGAAATTTTGAAGTGATATCGAC

mRNA sequence

AAAGTTTTAATTTTAAATTGTTTTTATAAAGAAAACTTAAAAAAGAAAAACAATTAATTCAAAAAGTGGACACGAATACGGAGAAAGAGTGTGAAGGACAGCGGTTGTCAACGAACAGAGAAACGGACCTCCTCCAGTTTGCGATGAGATCCGTCGGAAACAGAGCAAACCCTTCATCAACCTCCAATACCTTCACTTTTCTAATTTCCCAACCCTAATTCCCTCATTCAATTTGATTCTTCTCTTTTTGCTTTCAATTTTCCCCTTTTTATCTGTTTTTTCGTTCTTCTCCCTGGTAATTGCAGGTTAAATCCCGATGGGAAAGTTCTCTTCTCGCAAGAAGGGGCGTTCCAAGACTTCTTCATCCCAGAGAAGTAGGAGAAAGAGTAGGAGTAGTAGGAAACTGAAGTCCATGCGGTATCGCCATGATTCTCCCTCTGGCTCTGACAATGATTCTGAAAGCTCAACTTCATTGTCTTCTTCTAGCACGGAGGATGACGAAAAAGTGGGAAGATCTCGATCCAAGATGCGTAAGAATGCTAAAAAGAGAGCCAAGAAGCGATCTCATGACCGTCAAAGAAGGGATTACTCCCCTCATCCCAGAAAGAGGAAGCATTCAAAGAGAGACGAGTGTTGTGAGATGAAGAAGAGCAATAAAAAGAAGCGTAAACGAGATGCGAGTGTTCGTGCCACAAGTAGTGACTCTTTGAGCTGCTCGACTTGTGGAGATGGGAGTACAACCAGCAATGAGAGGGAAATCGATAGGCGTAAGGGCAGGTCTAGAAAGAGGAAAGAAAATATGGGGAAGATTGAAAGGAGTCGGTATTGGTCAAAGAGTCATTCGCCATGCTCTTTATGTAGTGAAGGTAGTGATCATCAGAATGAGGTTGAGAATGTCTGTTATGTTGAAAATAACTTTAGACGACTAAGATCTGTAATCGTTGTAGTTGGAGAGGAAGATAAATTAGAGACGTTTGATGGGAATGAACTACAAGAAAACGTCACGCATCAACCTGATCATGACCACCCTTCTTTTGGGGATATAAACAGAAATGATGGGATGAGTAATAGAGAATTAGATAATCTTATATCTGAAGAGGCACCAGTGATTATAACTGACAATAGAAACTCTATAGTTGTGAAGGATGATGGAGTTCAAAATGAAGGAAGCAACAATAACCATGGAGGATCAACTCATGACCATCCTTTATATGAAAGAAAGAATGGTTGTTCTGTAAACACCGACGACACAAACTGTATCGACTTAGAGTCGATTTTAAGACAGAGGGCTTTGGAAAACTTAAGAAAGTACAAACGGGTGCTCCCAAGGAATGTGGAAACTCCTGCTAATTACGAAGTCGACAATAGTAATGATGCGAAGCAACTGGACTCCCCTGTCTCTAAGTTGGTTCACGTGACTTCCCCTAGGGATGAGGCTGGGATAAATGGTCACAGGTTCTCTAGACAAGGTGGAGGGAACGCTGTAAATTCAATGATAATTGAAAATGGTGTTAAATCTACCGATGAAATGGACTCGGCCGTTGCATCTACGTATGATCCTGTCTATTCTTCACAGCACCTGGGTAAGATTTCCAATGGAAGCAATGATATGAATGAACTGAAGCAGCATATTTCGTCAGTAGACCAGGAGGTTGTAAATGATAGTATTTGCCATATGGCAGATGCAGATATTTGTCCAACAACTAACAGAAGCAATTTGGTTATTGCAGCTTTGAAGCCCGAGTCGAATGTTGATTCTCTTACCGAGCAGGCATCTGCCTCTCAGGAATCTATCCAAACAAAGCCATCTAAATCCGACATGGGCGACGGTGAAACCACTCAAACTCAGACCCAGATGAGGAACAATGATGTTCAAAACATTGGTGATGGTTTCGGATCTTCAGCTCACAAGCCATCATCTTCTTCTTCCCTTAATTCTATTTCAGGAGAAAGTCTCTTGAACGATTCCAGACACGAGAGTGGTGAAGGCTCACAGTTCGAACAGAAAACAATGTCGGTAAAGCGGGGTGGTGAAATGGTGCAGGTTAACTACAAGGTGTACATTCCAAAGAGAGCTCCTGGTTTGAGTAGGAGGCAACTCAAGCGGTGACTTAAGATCCATGATTTTGCAGCCTTGTAGGATGCTCCTGTTGCTTGCCATTCCAAAGATTGTGAAGTTTTGGATTAGAATTTTCCATTCGCTTTCTGTGCGAAGGATCTATAAAGCCTTGAAATATGAACAATAATTAGTGCAGCCAATTGGTAGCATTTGTCTGTTAACTTTTCCACGAGAATGATCAATATGACCATTTGATCAAACGAGAAAACTTGGTGATGTTCGGAGCCAGTGATGATTCACACAGCTTGACAAATCTATCTTGAAATTTTGAAGTGATATCGAC

Coding sequence (CDS)

ATGGGAAAGTTCTCTTCTCGCAAGAAGGGGCGTTCCAAGACTTCTTCATCCCAGAGAAGTAGGAGAAAGAGTAGGAGTAGTAGGAAACTGAAGTCCATGCGGTATCGCCATGATTCTCCCTCTGGCTCTGACAATGATTCTGAAAGCTCAACTTCATTGTCTTCTTCTAGCACGGAGGATGACGAAAAAGTGGGAAGATCTCGATCCAAGATGCGTAAGAATGCTAAAAAGAGAGCCAAGAAGCGATCTCATGACCGTCAAAGAAGGGATTACTCCCCTCATCCCAGAAAGAGGAAGCATTCAAAGAGAGACGAGTGTTGTGAGATGAAGAAGAGCAATAAAAAGAAGCGTAAACGAGATGCGAGTGTTCGTGCCACAAGTAGTGACTCTTTGAGCTGCTCGACTTGTGGAGATGGGAGTACAACCAGCAATGAGAGGGAAATCGATAGGCGTAAGGGCAGGTCTAGAAAGAGGAAAGAAAATATGGGGAAGATTGAAAGGAGTCGGTATTGGTCAAAGAGTCATTCGCCATGCTCTTTATGTAGTGAAGGTAGTGATCATCAGAATGAGGTTGAGAATGTCTGTTATGTTGAAAATAACTTTAGACGACTAAGATCTGTAATCGTTGTAGTTGGAGAGGAAGATAAATTAGAGACGTTTGATGGGAATGAACTACAAGAAAACGTCACGCATCAACCTGATCATGACCACCCTTCTTTTGGGGATATAAACAGAAATGATGGGATGAGTAATAGAGAATTAGATAATCTTATATCTGAAGAGGCACCAGTGATTATAACTGACAATAGAAACTCTATAGTTGTGAAGGATGATGGAGTTCAAAATGAAGGAAGCAACAATAACCATGGAGGATCAACTCATGACCATCCTTTATATGAAAGAAAGAATGGTTGTTCTGTAAACACCGACGACACAAACTGTATCGACTTAGAGTCGATTTTAAGACAGAGGGCTTTGGAAAACTTAAGAAAGTACAAACGGGTGCTCCCAAGGAATGTGGAAACTCCTGCTAATTACGAAGTCGACAATAGTAATGATGCGAAGCAACTGGACTCCCCTGTCTCTAAGTTGGTTCACGTGACTTCCCCTAGGGATGAGGCTGGGATAAATGGTCACAGGTTCTCTAGACAAGGTGGAGGGAACGCTGTAAATTCAATGATAATTGAAAATGGTGTTAAATCTACCGATGAAATGGACTCGGCCGTTGCATCTACGTATGATCCTGTCTATTCTTCACAGCACCTGGGTAAGATTTCCAATGGAAGCAATGATATGAATGAACTGAAGCAGCATATTTCGTCAGTAGACCAGGAGGTTGTAAATGATAGTATTTGCCATATGGCAGATGCAGATATTTGTCCAACAACTAACAGAAGCAATTTGGTTATTGCAGCTTTGAAGCCCGAGTCGAATGTTGATTCTCTTACCGAGCAGGCATCTGCCTCTCAGGAATCTATCCAAACAAAGCCATCTAAATCCGACATGGGCGACGGTGAAACCACTCAAACTCAGACCCAGATGAGGAACAATGATGTTCAAAACATTGGTGATGGTTTCGGATCTTCAGCTCACAAGCCATCATCTTCTTCTTCCCTTAATTCTATTTCAGGAGAAAGTCTCTTGAACGATTCCAGACACGAGAGTGGTGAAGGCTCACAGTTCGAACAGAAAACAATGTCGGTAAAGCGGGGTGGTGAAATGGTGCAGGTTAACTACAAGGTGTACATTCCAAAGAGAGCTCCTGGTTTGAGTAGGAGGCAACTCAAGCGGTGA

Protein sequence

MGKFSSRKKGRSKTSSSQRSRRKSRSSRKLKSMRYRHDSPSGSDNDSESSTSLSSSSTEDDEKVGRSRSKMRKNAKKRAKKRSHDRQRRDYSPHPRKRKHSKRDECCEMKKSNKKKRKRDASVRATSSDSLSCSTCGDGSTTSNEREIDRRKGRSRKRKENMGKIERSRYWSKSHSPCSLCSEGSDHQNEVENVCYVENNFRRLRSVIVVVGEEDKLETFDGNELQENVTHQPDHDHPSFGDINRNDGMSNRELDNLISEEAPVIITDNRNSIVVKDDGVQNEGSNNNHGGSTHDHPLYERKNGCSVNTDDTNCIDLESILRQRALENLRKYKRVLPRNVETPANYEVDNSNDAKQLDSPVSKLVHVTSPRDEAGINGHRFSRQGGGNAVNSMIIENGVKSTDEMDSAVASTYDPVYSSQHLGKISNGSNDMNELKQHISSVDQEVVNDSICHMADADICPTTNRSNLVIAALKPESNVDSLTEQASASQESIQTKPSKSDMGDGETTQTQTQMRNNDVQNIGDGFGSSAHKPSSSSSLNSISGESLLNDSRHESGEGSQFEQKTMSVKRGGEMVQVNYKVYIPKRAPGLSRRQLKR
Homology
BLAST of CmoCh01G012730 vs. ExPASy TrEMBL
Match: A0A6J1FTH5 (pre-mRNA-splicing factor CWC22 homolog isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111446687 PE=4 SV=1)

HSP 1 Score: 1112.1 bits (2875), Expect = 0.0e+00
Identity = 597/597 (100.00%), Postives = 597/597 (100.00%), Query Frame = 0

Query: 1   MGKFSSRKKGRSKTSSSQRSRRKSRSSRKLKSMRYRHDSPSGSDNDSESSTSLSSSSTED 60
           MGKFSSRKKGRSKTSSSQRSRRKSRSSRKLKSMRYRHDSPSGSDNDSESSTSLSSSSTED
Sbjct: 1   MGKFSSRKKGRSKTSSSQRSRRKSRSSRKLKSMRYRHDSPSGSDNDSESSTSLSSSSTED 60

Query: 61  DEKVGRSRSKMRKNAKKRAKKRSHDRQRRDYSPHPRKRKHSKRDECCEMKKSNKKKRKRD 120
           DEKVGRSRSKMRKNAKKRAKKRSHDRQRRDYSPHPRKRKHSKRDECCEMKKSNKKKRKRD
Sbjct: 61  DEKVGRSRSKMRKNAKKRAKKRSHDRQRRDYSPHPRKRKHSKRDECCEMKKSNKKKRKRD 120

Query: 121 ASVRATSSDSLSCSTCGDGSTTSNEREIDRRKGRSRKRKENMGKIERSRYWSKSHSPCSL 180
           ASVRATSSDSLSCSTCGDGSTTSNEREIDRRKGRSRKRKENMGKIERSRYWSKSHSPCSL
Sbjct: 121 ASVRATSSDSLSCSTCGDGSTTSNEREIDRRKGRSRKRKENMGKIERSRYWSKSHSPCSL 180

Query: 181 CSEGSDHQNEVENVCYVENNFRRLRSVIVVVGEEDKLETFDGNELQENVTHQPDHDHPSF 240
           CSEGSDHQNEVENVCYVENNFRRLRSVIVVVGEEDKLETFDGNELQENVTHQPDHDHPSF
Sbjct: 181 CSEGSDHQNEVENVCYVENNFRRLRSVIVVVGEEDKLETFDGNELQENVTHQPDHDHPSF 240

Query: 241 GDINRNDGMSNRELDNLISEEAPVIITDNRNSIVVKDDGVQNEGSNNNHGGSTHDHPLYE 300
           GDINRNDGMSNRELDNLISEEAPVIITDNRNSIVVKDDGVQNEGSNNNHGGSTHDHPLYE
Sbjct: 241 GDINRNDGMSNRELDNLISEEAPVIITDNRNSIVVKDDGVQNEGSNNNHGGSTHDHPLYE 300

Query: 301 RKNGCSVNTDDTNCIDLESILRQRALENLRKYKRVLPRNVETPANYEVDNSNDAKQLDSP 360
           RKNGCSVNTDDTNCIDLESILRQRALENLRKYKRVLPRNVETPANYEVDNSNDAKQLDSP
Sbjct: 301 RKNGCSVNTDDTNCIDLESILRQRALENLRKYKRVLPRNVETPANYEVDNSNDAKQLDSP 360

Query: 361 VSKLVHVTSPRDEAGINGHRFSRQGGGNAVNSMIIENGVKSTDEMDSAVASTYDPVYSSQ 420
           VSKLVHVTSPRDEAGINGHRFSRQGGGNAVNSMIIENGVKSTDEMDSAVASTYDPVYSSQ
Sbjct: 361 VSKLVHVTSPRDEAGINGHRFSRQGGGNAVNSMIIENGVKSTDEMDSAVASTYDPVYSSQ 420

Query: 421 HLGKISNGSNDMNELKQHISSVDQEVVNDSICHMADADICPTTNRSNLVIAALKPESNVD 480
           HLGKISNGSNDMNELKQHISSVDQEVVNDSICHMADADICPTTNRSNLVIAALKPESNVD
Sbjct: 421 HLGKISNGSNDMNELKQHISSVDQEVVNDSICHMADADICPTTNRSNLVIAALKPESNVD 480

Query: 481 SLTEQASASQESIQTKPSKSDMGDGETTQTQTQMRNNDVQNIGDGFGSSAHKPSSSSSLN 540
           SLTEQASASQESIQTKPSKSDMGDGETTQTQTQMRNNDVQNIGDGFGSSAHKPSSSSSLN
Sbjct: 481 SLTEQASASQESIQTKPSKSDMGDGETTQTQTQMRNNDVQNIGDGFGSSAHKPSSSSSLN 540

Query: 541 SISGESLLNDSRHESGEGSQFEQKTMSVKRGGEMVQVNYKVYIPKRAPGLSRRQLKR 598
           SISGESLLNDSRHESGEGSQFEQKTMSVKRGGEMVQVNYKVYIPKRAPGLSRRQLKR
Sbjct: 541 SISGESLLNDSRHESGEGSQFEQKTMSVKRGGEMVQVNYKVYIPKRAPGLSRRQLKR 597

BLAST of CmoCh01G012730 vs. ExPASy TrEMBL
Match: A0A6J1FN60 (pre-mRNA-splicing factor CWC22 homolog isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111446687 PE=4 SV=1)

HSP 1 Score: 1085.1 bits (2805), Expect = 0.0e+00
Identity = 579/580 (99.83%), Postives = 580/580 (100.00%), Query Frame = 0

Query: 18  QRSRRKSRSSRKLKSMRYRHDSPSGSDNDSESSTSLSSSSTEDDEKVGRSRSKMRKNAKK 77
           +RSRRKSRSSRKLKSMRYRHDSPSGSDNDSESSTSLSSSSTEDDEKVGRSRSKMRKNAKK
Sbjct: 36  KRSRRKSRSSRKLKSMRYRHDSPSGSDNDSESSTSLSSSSTEDDEKVGRSRSKMRKNAKK 95

Query: 78  RAKKRSHDRQRRDYSPHPRKRKHSKRDECCEMKKSNKKKRKRDASVRATSSDSLSCSTCG 137
           RAKKRSHDRQRRDYSPHPRKRKHSKRDECCEMKKSNKKKRKRDASVRATSSDSLSCSTCG
Sbjct: 96  RAKKRSHDRQRRDYSPHPRKRKHSKRDECCEMKKSNKKKRKRDASVRATSSDSLSCSTCG 155

Query: 138 DGSTTSNEREIDRRKGRSRKRKENMGKIERSRYWSKSHSPCSLCSEGSDHQNEVENVCYV 197
           DGSTTSNEREIDRRKGRSRKRKENMGKIERSRYWSKSHSPCSLCSEGSDHQNEVENVCYV
Sbjct: 156 DGSTTSNEREIDRRKGRSRKRKENMGKIERSRYWSKSHSPCSLCSEGSDHQNEVENVCYV 215

Query: 198 ENNFRRLRSVIVVVGEEDKLETFDGNELQENVTHQPDHDHPSFGDINRNDGMSNRELDNL 257
           ENNFRRLRSVIVVVGEEDKLETFDGNELQENVTHQPDHDHPSFGDINRNDGMSNRELDNL
Sbjct: 216 ENNFRRLRSVIVVVGEEDKLETFDGNELQENVTHQPDHDHPSFGDINRNDGMSNRELDNL 275

Query: 258 ISEEAPVIITDNRNSIVVKDDGVQNEGSNNNHGGSTHDHPLYERKNGCSVNTDDTNCIDL 317
           ISEEAPVIITDNRNSIVVKDDGVQNEGSNNNHGGSTHDHPLYERKNGCSVNTDDTNCIDL
Sbjct: 276 ISEEAPVIITDNRNSIVVKDDGVQNEGSNNNHGGSTHDHPLYERKNGCSVNTDDTNCIDL 335

Query: 318 ESILRQRALENLRKYKRVLPRNVETPANYEVDNSNDAKQLDSPVSKLVHVTSPRDEAGIN 377
           ESILRQRALENLRKYKRVLPRNVETPANYEVDNSNDAKQLDSPVSKLVHVTSPRDEAGIN
Sbjct: 336 ESILRQRALENLRKYKRVLPRNVETPANYEVDNSNDAKQLDSPVSKLVHVTSPRDEAGIN 395

Query: 378 GHRFSRQGGGNAVNSMIIENGVKSTDEMDSAVASTYDPVYSSQHLGKISNGSNDMNELKQ 437
           GHRFSRQGGGNAVNSMIIENGVKSTDEMDSAVASTYDPVYSSQHLGKISNGSNDMNELKQ
Sbjct: 396 GHRFSRQGGGNAVNSMIIENGVKSTDEMDSAVASTYDPVYSSQHLGKISNGSNDMNELKQ 455

Query: 438 HISSVDQEVVNDSICHMADADICPTTNRSNLVIAALKPESNVDSLTEQASASQESIQTKP 497
           HISSVDQEVVNDSICHMADADICPTTNRSNLVIAALKPESNVDSLTEQASASQESIQTKP
Sbjct: 456 HISSVDQEVVNDSICHMADADICPTTNRSNLVIAALKPESNVDSLTEQASASQESIQTKP 515

Query: 498 SKSDMGDGETTQTQTQMRNNDVQNIGDGFGSSAHKPSSSSSLNSISGESLLNDSRHESGE 557
           SKSDMGDGETTQTQTQMRNNDVQNIGDGFGSSAHKPSSSSSLNSISGESLLNDSRHESGE
Sbjct: 516 SKSDMGDGETTQTQTQMRNNDVQNIGDGFGSSAHKPSSSSSLNSISGESLLNDSRHESGE 575

Query: 558 GSQFEQKTMSVKRGGEMVQVNYKVYIPKRAPGLSRRQLKR 598
           GSQFEQKTMSVKRGGEMVQVNYKVYIPKRAPGLSRRQLKR
Sbjct: 576 GSQFEQKTMSVKRGGEMVQVNYKVYIPKRAPGLSRRQLKR 615

BLAST of CmoCh01G012730 vs. ExPASy TrEMBL
Match: A0A6J1FKY7 (pre-mRNA-splicing factor CWC22 homolog isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111446687 PE=4 SV=1)

HSP 1 Score: 967.2 bits (2499), Expect = 3.1e-278
Identity = 530/580 (91.38%), Postives = 531/580 (91.55%), Query Frame = 0

Query: 18  QRSRRKSRSSRKLKSMRYRHDSPSGSDNDSESSTSLSSSSTEDDEKVGRSRSKMRKNAKK 77
           +RSRRKSRSSRKLKSMRYRHDSPSGSDNDSESSTSLSSSSTEDDEKVGRSRSKMRKNAKK
Sbjct: 36  KRSRRKSRSSRKLKSMRYRHDSPSGSDNDSESSTSLSSSSTEDDEKVGRSRSKMRKNAKK 95

Query: 78  RAKKRSHDRQRRDYSPHPRKRKHSKRDECCEMKKSNKKKRKRDASVRATSSDSLSCSTCG 137
           RAKKRSHDRQRRDYSPHPRKRKHSKRDECCEMKKSNKKKRKRDASVRATSSDSLSCSTCG
Sbjct: 96  RAKKRSHDRQRRDYSPHPRKRKHSKRDECCEMKKSNKKKRKRDASVRATSSDSLSCSTCG 155

Query: 138 DGSTTSNEREIDRRKGRSRKRKENMGKIERSRYWSKSHSPCSLCSEGSDHQNEVENVCYV 197
           DGSTTSNEREIDRRKGRSRKRKENMGKIERSRYWSKSHSPCSLCSEGSDHQNEVENVCYV
Sbjct: 156 DGSTTSNEREIDRRKGRSRKRKENMGKIERSRYWSKSHSPCSLCSEGSDHQNEVENVCYV 215

Query: 198 ENNFRRLRSVIVVVGEEDKLETFDGNELQENVTHQPDHDHPSFGDINRNDGMSNRELDNL 257
           ENNFRRLRSVIVVVGEEDKLETFDGNELQENVTHQPDHDHPSFGDINRNDGMSNRELDNL
Sbjct: 216 ENNFRRLRSVIVVVGEEDKLETFDGNELQENVTHQPDHDHPSFGDINRNDGMSNRELDNL 275

Query: 258 ISEEAPVIITDNRNSIVVKDDGVQNEGSNNNHGGSTHDHPLYERKNGCSVNTDDTNCIDL 317
           ISEEAPVIITDNRNSIVVKDDGVQNEGSNNNHGGSTHDHPLYERKNGCSVNTDDTNCIDL
Sbjct: 276 ISEEAPVIITDNRNSIVVKDDGVQNEGSNNNHGGSTHDHPLYERKNGCSVNTDDTNCIDL 335

Query: 318 ESILRQRALENLRKYKRVLPRNVETPANYEVDNSNDAKQLDSPVSKLVHVTSPRDEAGIN 377
           ESILRQRALENLRKYKRVLPRNVETPANYEVDNSNDAKQLDSPVSKLVHVTSPRDEAGIN
Sbjct: 336 ESILRQRALENLRKYKRVLPRNVETPANYEVDNSNDAKQLDSPVSKLVHVTSPRDEAGIN 395

Query: 378 GHRFSRQGGGNAVNSMIIENGVKSTDEMDSAVASTYDPVYSSQHLGKISNGSNDMNELKQ 437
           GHRFSRQGGGNAVNSMIIENGVKSTDEMDSAVASTYDPVYSSQHL               
Sbjct: 396 GHRFSRQGGGNAVNSMIIENGVKSTDEMDSAVASTYDPVYSSQHL--------------- 455

Query: 438 HISSVDQEVVNDSICHMADADICPTTNRSNLVIAALKPESNVDSLTEQASASQESIQTKP 497
                                             ALKPESNVDSLTEQASASQESIQTKP
Sbjct: 456 ----------------------------------ALKPESNVDSLTEQASASQESIQTKP 515

Query: 498 SKSDMGDGETTQTQTQMRNNDVQNIGDGFGSSAHKPSSSSSLNSISGESLLNDSRHESGE 557
           SKSDMGDGETTQTQTQMRNNDVQNIGDGFGSSAHKPSSSSSLNSISGESLLNDSRHESGE
Sbjct: 516 SKSDMGDGETTQTQTQMRNNDVQNIGDGFGSSAHKPSSSSSLNSISGESLLNDSRHESGE 566

Query: 558 GSQFEQKTMSVKRGGEMVQVNYKVYIPKRAPGLSRRQLKR 598
           GSQFEQKTMSVKRGGEMVQVNYKVYIPKRAPGLSRRQLKR
Sbjct: 576 GSQFEQKTMSVKRGGEMVQVNYKVYIPKRAPGLSRRQLKR 566

BLAST of CmoCh01G012730 vs. ExPASy TrEMBL
Match: A0A6J1CDR0 (uncharacterized protein LOC111010601 OS=Momordica charantia OX=3673 GN=LOC111010601 PE=4 SV=1)

HSP 1 Score: 762.3 bits (1967), Expect = 1.5e-216
Identity = 458/611 (74.96%), Postives = 498/611 (81.51%), Query Frame = 0

Query: 1   MGKFSSRKKGRSKTSSSQRSRRKSRSSRKLKS--MRYRHDSPSGSDNDSESSTSLSSSST 60
           MGK  SRKK RSKTSSSQRSRRK+RSSRKLKS  +RYRHDSPS SD D ESSTSLSSSS+
Sbjct: 1   MGK--SRKKERSKTSSSQRSRRKNRSSRKLKSKKLRYRHDSPSCSDTDFESSTSLSSSSS 60

Query: 61  EDDEKVGRSRSKMRKNA---KKRAKKRSHDRQRRDYSPHPRKRKHSKRDECCEMKKSNK- 120
           EDDEKVGRSRS   KNA   KKRAKKRS D Q RD SPHPRKRKHSKR + CE+KK+NK 
Sbjct: 61  EDDEKVGRSRSNKLKNAKPGKKRAKKRSRDDQIRDLSPHPRKRKHSKRHDRCEVKKTNKR 120

Query: 121 KKRKRDASVRATSSDSLSCSTCGDGSTTSNEREIDRRKGRSRKRKENMGKIERSRYWSKS 180
           KKR+RD SV ATS DSLSCSTCGDGSTTSNE EIDR +GRS KRK N GK ERSRY SKS
Sbjct: 121 KKRRRDVSVSATSRDSLSCSTCGDGSTTSNESEIDRHRGRSGKRKRNRGKTERSRYRSKS 180

Query: 181 HSPCSLCSEGSDHQNEVENVCYVENNFRRLRSVIVVVGEEDKLETFDGNELQENVTHQPD 240
           HSPCSLCSEGSD+QNEVE+  YVENNFRRLRSVIVVVGEE+KL+TFDGNE QE V H PD
Sbjct: 181 HSPCSLCSEGSDYQNEVEDGSYVENNFRRLRSVIVVVGEENKLKTFDGNEQQEEVMHHPD 240

Query: 241 HDHPSFGDINRNDGMSNRELDNLISEEA-------PVIITDNRNSIVVKDDGVQNEGSNN 300
            DHPSFGD++ NDGMS RELD + S EA        V+I D RN +VVKD GVQNEGSNN
Sbjct: 241 DDHPSFGDMDSNDGMSKRELDRVTSNEASEVENKKEVVIPDIRNFLVVKDGGVQNEGSNN 300

Query: 301 NHGGSTHDHPLYERKNGCSVNTDDTNCIDLESILRQRALENLRKYKRVLPRNVETPANYE 360
           NHGG T+DHPL E  NG S NTD  NCIDLESILRQRALENLRK+K V P+NVET AN +
Sbjct: 301 NHGGVTNDHPLNEGNNG-SGNTDRINCIDLESILRQRALENLRKFKGVPPKNVETSANCQ 360

Query: 361 VDNSNDAKQLDSPVSKLVHVTSPRDEAGINGHRFSRQGGGNAVNSMII-ENGVKSTDEMD 420
           VDNSNDAKQL SPVS  V + SPRD+A ING  FS QGGGNAVN MI+ ENGV+ST+ +D
Sbjct: 361 VDNSNDAKQLYSPVSNSVRIKSPRDDAEINGKGFSGQGGGNAVNPMIVEENGVESTNAID 420

Query: 421 SAVASTYDPVYSSQHLGKISNGSNDMNELKQHISSVDQEVVNDSICHMADADICPTTNRS 480
           SAVAST+DP+YSSQ+LGKIS+ SN MNELKQ ISS+DQE VND+IC   DADIC TT+RS
Sbjct: 421 SAVASTHDPIYSSQNLGKISSTSNGMNELKQDISSLDQEAVNDNICQKVDADICSTTSRS 480

Query: 481 NLVIAALKPESNVDSLTEQASASQESIQTKPSKSDMGDGETTQTQTQMRNNDVQNIGDGF 540
           NLV AAL+P+S VD L +QASA QE IQTKPS SDMG  E  Q Q Q RNND QNI +GF
Sbjct: 481 NLVYAALRPDSKVDFLVKQASAPQEYIQTKPSISDMGVDEIAQMQIQTRNNDDQNIVNGF 540

Query: 541 GSSAHKPSSSSSLNSISGESLLNDSRHESGEGSQFEQKTMSVKRGGEMVQVNYKVYIPKR 598
            SSAHKP  SSSLN  SGE+ LN  RHESGEGSQFEQKTMSV RGGEMVQVNYKVYIPKR
Sbjct: 541 DSSAHKP--SSSLNYFSGENSLNKPRHESGEGSQFEQKTMSVMRGGEMVQVNYKVYIPKR 600

BLAST of CmoCh01G012730 vs. ExPASy TrEMBL
Match: A0A6J1F6D1 (uncharacterized protein LOC111442542 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111442542 PE=4 SV=1)

HSP 1 Score: 726.9 bits (1875), Expect = 7.0e-206
Identity = 437/611 (71.52%), Postives = 499/611 (81.67%), Query Frame = 0

Query: 1   MGK-FSSRKKGRSKTSSSQRSRRKSRSSRKLKS--MRYRHDSPSGSDNDSESSTSLSSSS 60
           MGK  SSRKK RSKTSSSQRSRRKS+SSR+LKS  +RYRHDSPS SD D ESSTS+SSSS
Sbjct: 1   MGKASSSRKKERSKTSSSQRSRRKSKSSRRLKSKKLRYRHDSPSCSDTDFESSTSVSSSS 60

Query: 61  TEDDEKVGRSRSKMRKN---AKKRAKKRSHDRQRRDYSPHPRKRKHSKRDECCEMKKSNK 120
           +EDD+KV RSRSK RKN   +KKR+KK+SHD Q R+ SPHPRKRKHSKR +  E KK+NK
Sbjct: 61  SEDDKKVRRSRSKTRKNSKPSKKRSKKQSHDHQSRECSPHPRKRKHSKRSDRYEAKKTNK 120

Query: 121 KKRKRDASVRATSSDSLSCSTCGDGSTTSNEREIDRRKGRSRKRKENMGKIERSRYWSKS 180
           KKR+RDASV AT+SDSL  STCGDGS+TS++ EIDRR+GRS KRK NM K E  RY SKS
Sbjct: 121 KKRRRDASVGATNSDSLGRSTCGDGSSTSSDSEIDRRRGRSGKRKRNMVKTEGRRYRSKS 180

Query: 181 HSPCSLCSEGSDHQNEVENVCYVENNFRRLRSVIVVVGEEDKLETFDGNELQENVTHQPD 240
            SPCSLCS+GSD QNEVE+  YVEN+ RRL+S+IVVVGEED+L+TF GNE QE VTHQ D
Sbjct: 181 RSPCSLCSDGSDFQNEVEDDSYVENSCRRLKSIIVVVGEEDELKTFVGNEQQEAVTHQLD 240

Query: 241 HDHPSFGDINRNDGMSNRELDNLISEEAP-------VIITDNRNSIVVKDDGVQNEGSNN 300
            +HPSFGD+N  DG S RELD +IS+EAP       ++  DNRNS+++ DDGV+NEGSN 
Sbjct: 241 DNHPSFGDMNSKDGTSKRELDYVISKEAPEVESKNKIVTPDNRNSLILNDDGVRNEGSNK 300

Query: 301 NHGGSTHDHPLYERKNGCSVNTDDTNCIDLESILRQRALENLRKYKRVLPRNVETPANYE 360
           NHGG T+DH L ERKNGCS NT+  NCIDLESILRQ+ALENLRK+K V PRNVE  AN +
Sbjct: 301 NHGGVTNDHSLDERKNGCSGNTESINCIDLESILRQKALENLRKFKGVSPRNVEIIANCK 360

Query: 361 VDNSNDAKQLDSPVSKLVHVTSPRDEAGINGHRFSRQGGGNAVNSMIIE-NGVKSTDEMD 420
           V+N+NDAKQL SPVSK VHVT PRD+A IN   FSRQ GG+AVNSMI++ NG KSTD +D
Sbjct: 361 VENNNDAKQLISPVSKSVHVTFPRDDAEINVKGFSRQDGGDAVNSMIVKGNGFKSTDAID 420

Query: 421 SAVASTYDPVYSSQHLGKISNGSNDMNELKQHISSVDQEVVNDSICHMADADICPTTNRS 480
           +AVAS +DPV SSQ+LGKISNGSN MNE KQ ISS+DQEV+ND+IC  ADADI  TTNRS
Sbjct: 421 TAVASMHDPVCSSQNLGKISNGSNGMNEPKQDISSLDQEVINDNICLKADADIYSTTNRS 480

Query: 481 NLVIAALKPESNVDSLTEQASASQESIQTKPSKSDMGDGETTQTQTQMRNNDVQNIGDGF 540
           NLVIAA +PES VDS  ++AS  QE IQTK S SD+   ET QTQTQM NND QNI +GF
Sbjct: 481 NLVIAAFRPESKVDSFIKKASVDQECIQTKSSISDIVVDETAQTQTQMTNNDDQNIRNGF 540

Query: 541 GSSAHKPSSSSSLNSISGESLLNDSRHESGEGSQFEQKTMSVKRGGEMVQVNYKVYIPKR 598
           GSSA+K  SSSSLN ISGE+ L+ SR ESGEGSQFEQKTMSV RGGEMVQVNYKVYIPKR
Sbjct: 541 GSSAYK--SSSSLNPISGENRLDKSRQESGEGSQFEQKTMSVMRGGEMVQVNYKVYIPKR 600

BLAST of CmoCh01G012730 vs. NCBI nr
Match: XP_022941380.1 (pre-mRNA-splicing factor CWC22 homolog isoform X2 [Cucurbita moschata])

HSP 1 Score: 1112.1 bits (2875), Expect = 0.0e+00
Identity = 597/597 (100.00%), Postives = 597/597 (100.00%), Query Frame = 0

Query: 1   MGKFSSRKKGRSKTSSSQRSRRKSRSSRKLKSMRYRHDSPSGSDNDSESSTSLSSSSTED 60
           MGKFSSRKKGRSKTSSSQRSRRKSRSSRKLKSMRYRHDSPSGSDNDSESSTSLSSSSTED
Sbjct: 1   MGKFSSRKKGRSKTSSSQRSRRKSRSSRKLKSMRYRHDSPSGSDNDSESSTSLSSSSTED 60

Query: 61  DEKVGRSRSKMRKNAKKRAKKRSHDRQRRDYSPHPRKRKHSKRDECCEMKKSNKKKRKRD 120
           DEKVGRSRSKMRKNAKKRAKKRSHDRQRRDYSPHPRKRKHSKRDECCEMKKSNKKKRKRD
Sbjct: 61  DEKVGRSRSKMRKNAKKRAKKRSHDRQRRDYSPHPRKRKHSKRDECCEMKKSNKKKRKRD 120

Query: 121 ASVRATSSDSLSCSTCGDGSTTSNEREIDRRKGRSRKRKENMGKIERSRYWSKSHSPCSL 180
           ASVRATSSDSLSCSTCGDGSTTSNEREIDRRKGRSRKRKENMGKIERSRYWSKSHSPCSL
Sbjct: 121 ASVRATSSDSLSCSTCGDGSTTSNEREIDRRKGRSRKRKENMGKIERSRYWSKSHSPCSL 180

Query: 181 CSEGSDHQNEVENVCYVENNFRRLRSVIVVVGEEDKLETFDGNELQENVTHQPDHDHPSF 240
           CSEGSDHQNEVENVCYVENNFRRLRSVIVVVGEEDKLETFDGNELQENVTHQPDHDHPSF
Sbjct: 181 CSEGSDHQNEVENVCYVENNFRRLRSVIVVVGEEDKLETFDGNELQENVTHQPDHDHPSF 240

Query: 241 GDINRNDGMSNRELDNLISEEAPVIITDNRNSIVVKDDGVQNEGSNNNHGGSTHDHPLYE 300
           GDINRNDGMSNRELDNLISEEAPVIITDNRNSIVVKDDGVQNEGSNNNHGGSTHDHPLYE
Sbjct: 241 GDINRNDGMSNRELDNLISEEAPVIITDNRNSIVVKDDGVQNEGSNNNHGGSTHDHPLYE 300

Query: 301 RKNGCSVNTDDTNCIDLESILRQRALENLRKYKRVLPRNVETPANYEVDNSNDAKQLDSP 360
           RKNGCSVNTDDTNCIDLESILRQRALENLRKYKRVLPRNVETPANYEVDNSNDAKQLDSP
Sbjct: 301 RKNGCSVNTDDTNCIDLESILRQRALENLRKYKRVLPRNVETPANYEVDNSNDAKQLDSP 360

Query: 361 VSKLVHVTSPRDEAGINGHRFSRQGGGNAVNSMIIENGVKSTDEMDSAVASTYDPVYSSQ 420
           VSKLVHVTSPRDEAGINGHRFSRQGGGNAVNSMIIENGVKSTDEMDSAVASTYDPVYSSQ
Sbjct: 361 VSKLVHVTSPRDEAGINGHRFSRQGGGNAVNSMIIENGVKSTDEMDSAVASTYDPVYSSQ 420

Query: 421 HLGKISNGSNDMNELKQHISSVDQEVVNDSICHMADADICPTTNRSNLVIAALKPESNVD 480
           HLGKISNGSNDMNELKQHISSVDQEVVNDSICHMADADICPTTNRSNLVIAALKPESNVD
Sbjct: 421 HLGKISNGSNDMNELKQHISSVDQEVVNDSICHMADADICPTTNRSNLVIAALKPESNVD 480

Query: 481 SLTEQASASQESIQTKPSKSDMGDGETTQTQTQMRNNDVQNIGDGFGSSAHKPSSSSSLN 540
           SLTEQASASQESIQTKPSKSDMGDGETTQTQTQMRNNDVQNIGDGFGSSAHKPSSSSSLN
Sbjct: 481 SLTEQASASQESIQTKPSKSDMGDGETTQTQTQMRNNDVQNIGDGFGSSAHKPSSSSSLN 540

Query: 541 SISGESLLNDSRHESGEGSQFEQKTMSVKRGGEMVQVNYKVYIPKRAPGLSRRQLKR 598
           SISGESLLNDSRHESGEGSQFEQKTMSVKRGGEMVQVNYKVYIPKRAPGLSRRQLKR
Sbjct: 541 SISGESLLNDSRHESGEGSQFEQKTMSVKRGGEMVQVNYKVYIPKRAPGLSRRQLKR 597

BLAST of CmoCh01G012730 vs. NCBI nr
Match: XP_022941379.1 (pre-mRNA-splicing factor CWC22 homolog isoform X1 [Cucurbita moschata])

HSP 1 Score: 1085.1 bits (2805), Expect = 0.0e+00
Identity = 579/580 (99.83%), Postives = 580/580 (100.00%), Query Frame = 0

Query: 18  QRSRRKSRSSRKLKSMRYRHDSPSGSDNDSESSTSLSSSSTEDDEKVGRSRSKMRKNAKK 77
           +RSRRKSRSSRKLKSMRYRHDSPSGSDNDSESSTSLSSSSTEDDEKVGRSRSKMRKNAKK
Sbjct: 36  KRSRRKSRSSRKLKSMRYRHDSPSGSDNDSESSTSLSSSSTEDDEKVGRSRSKMRKNAKK 95

Query: 78  RAKKRSHDRQRRDYSPHPRKRKHSKRDECCEMKKSNKKKRKRDASVRATSSDSLSCSTCG 137
           RAKKRSHDRQRRDYSPHPRKRKHSKRDECCEMKKSNKKKRKRDASVRATSSDSLSCSTCG
Sbjct: 96  RAKKRSHDRQRRDYSPHPRKRKHSKRDECCEMKKSNKKKRKRDASVRATSSDSLSCSTCG 155

Query: 138 DGSTTSNEREIDRRKGRSRKRKENMGKIERSRYWSKSHSPCSLCSEGSDHQNEVENVCYV 197
           DGSTTSNEREIDRRKGRSRKRKENMGKIERSRYWSKSHSPCSLCSEGSDHQNEVENVCYV
Sbjct: 156 DGSTTSNEREIDRRKGRSRKRKENMGKIERSRYWSKSHSPCSLCSEGSDHQNEVENVCYV 215

Query: 198 ENNFRRLRSVIVVVGEEDKLETFDGNELQENVTHQPDHDHPSFGDINRNDGMSNRELDNL 257
           ENNFRRLRSVIVVVGEEDKLETFDGNELQENVTHQPDHDHPSFGDINRNDGMSNRELDNL
Sbjct: 216 ENNFRRLRSVIVVVGEEDKLETFDGNELQENVTHQPDHDHPSFGDINRNDGMSNRELDNL 275

Query: 258 ISEEAPVIITDNRNSIVVKDDGVQNEGSNNNHGGSTHDHPLYERKNGCSVNTDDTNCIDL 317
           ISEEAPVIITDNRNSIVVKDDGVQNEGSNNNHGGSTHDHPLYERKNGCSVNTDDTNCIDL
Sbjct: 276 ISEEAPVIITDNRNSIVVKDDGVQNEGSNNNHGGSTHDHPLYERKNGCSVNTDDTNCIDL 335

Query: 318 ESILRQRALENLRKYKRVLPRNVETPANYEVDNSNDAKQLDSPVSKLVHVTSPRDEAGIN 377
           ESILRQRALENLRKYKRVLPRNVETPANYEVDNSNDAKQLDSPVSKLVHVTSPRDEAGIN
Sbjct: 336 ESILRQRALENLRKYKRVLPRNVETPANYEVDNSNDAKQLDSPVSKLVHVTSPRDEAGIN 395

Query: 378 GHRFSRQGGGNAVNSMIIENGVKSTDEMDSAVASTYDPVYSSQHLGKISNGSNDMNELKQ 437
           GHRFSRQGGGNAVNSMIIENGVKSTDEMDSAVASTYDPVYSSQHLGKISNGSNDMNELKQ
Sbjct: 396 GHRFSRQGGGNAVNSMIIENGVKSTDEMDSAVASTYDPVYSSQHLGKISNGSNDMNELKQ 455

Query: 438 HISSVDQEVVNDSICHMADADICPTTNRSNLVIAALKPESNVDSLTEQASASQESIQTKP 497
           HISSVDQEVVNDSICHMADADICPTTNRSNLVIAALKPESNVDSLTEQASASQESIQTKP
Sbjct: 456 HISSVDQEVVNDSICHMADADICPTTNRSNLVIAALKPESNVDSLTEQASASQESIQTKP 515

Query: 498 SKSDMGDGETTQTQTQMRNNDVQNIGDGFGSSAHKPSSSSSLNSISGESLLNDSRHESGE 557
           SKSDMGDGETTQTQTQMRNNDVQNIGDGFGSSAHKPSSSSSLNSISGESLLNDSRHESGE
Sbjct: 516 SKSDMGDGETTQTQTQMRNNDVQNIGDGFGSSAHKPSSSSSLNSISGESLLNDSRHESGE 575

Query: 558 GSQFEQKTMSVKRGGEMVQVNYKVYIPKRAPGLSRRQLKR 598
           GSQFEQKTMSVKRGGEMVQVNYKVYIPKRAPGLSRRQLKR
Sbjct: 576 GSQFEQKTMSVKRGGEMVQVNYKVYIPKRAPGLSRRQLKR 615

BLAST of CmoCh01G012730 vs. NCBI nr
Match: KAG7037416.1 (hypothetical protein SDJN02_01042 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1060.8 bits (2742), Expect = 4.2e-306
Identity = 575/599 (95.99%), Postives = 587/599 (98.00%), Query Frame = 0

Query: 1   MGKFSSRKKGRSKTSSSQRSRRKSRSSRKLKS--MRYRHDSPSGSDNDSESSTSLSSSST 60
           MGKFSSRKKGRSKTSSSQRSRRKSRSSRKLKS  +RYRHDSPSGSDNDSE+STSLSSSST
Sbjct: 1   MGKFSSRKKGRSKTSSSQRSRRKSRSSRKLKSKKLRYRHDSPSGSDNDSETSTSLSSSST 60

Query: 61  EDDEKVGRSRSKMRKNAKKRAKKRSHDRQRRDYSPHPRKRKHSKRDECCEMKKSNKKKRK 120
           EDDEKVGRSRSKMRKNAKKRAKKRSHDRQRRDYSPHPRKRKHSKRDECCEMKKSNKKKRK
Sbjct: 61  EDDEKVGRSRSKMRKNAKKRAKKRSHDRQRRDYSPHPRKRKHSKRDECCEMKKSNKKKRK 120

Query: 121 RDASVRATSSDSLSCSTCGDGSTTSNEREIDRRKGRSRKRKENMGKIERSRYWSKSHSPC 180
           RDASVRATSSDSL CSTCGDGSTTSNEREIDRRKGRSRKRKENMGKIERS+Y S SHSPC
Sbjct: 121 RDASVRATSSDSLCCSTCGDGSTTSNEREIDRRKGRSRKRKENMGKIERSQYRSNSHSPC 180

Query: 181 SLCSEGSDHQNEVENVCYVENNFRRLRSVIVVVGEEDKLETFDGNELQENVTHQPDHDHP 240
           SLCSEGSDHQNEVE+VCYVENNFRRLRSVIVVVGEEDKLETFDGNELQENVTHQPDHDHP
Sbjct: 181 SLCSEGSDHQNEVEDVCYVENNFRRLRSVIVVVGEEDKLETFDGNELQENVTHQPDHDHP 240

Query: 241 SFGDINRNDGMSNRELDNLISEEAPVIITDNRNSIVVKDDGVQNEGSNNNHGGSTHDHPL 300
           SFGDINRNDGMSNRELDNLISEEAPVIITDNRNSIVVK+DGVQNEGSNNNHGGSTHDHPL
Sbjct: 241 SFGDINRNDGMSNRELDNLISEEAPVIITDNRNSIVVKEDGVQNEGSNNNHGGSTHDHPL 300

Query: 301 YERKNGCSVNTDDTNCIDLESILRQRALENLRKYKRVLPRNVETPANYEVDNSNDAKQLD 360
           YERKNGCS NT+DTNCIDLESILRQRALENLRKYKRVLPRNVETP+N EVDNSNDAKQLD
Sbjct: 301 YERKNGCSGNTNDTNCIDLESILRQRALENLRKYKRVLPRNVETPSNCEVDNSNDAKQLD 360

Query: 361 SPVSKLVHVTSPRDEAGINGHRFSRQGGGNAVNSMIIENGVKSTDEMDSAVASTYDPVYS 420
           SPVSK  HVTSPRDEAGI+G+RFSRQGGGNAVNSMIIENGVKSTDEMDSAVASTYDPVYS
Sbjct: 361 SPVSKSAHVTSPRDEAGIDGNRFSRQGGGNAVNSMIIENGVKSTDEMDSAVASTYDPVYS 420

Query: 421 SQHLGKISNGSNDMNELKQHISSVDQEVVNDSICHMADADICPTTNRSNLVIAALKPESN 480
           SQ LGKISNGSNDMNELK+HISSVDQEVVNDSICHMADADICPTTNRSNLVIAALKPESN
Sbjct: 421 SQRLGKISNGSNDMNELKKHISSVDQEVVNDSICHMADADICPTTNRSNLVIAALKPESN 480

Query: 481 VDSLTEQASASQESIQTKPSKSDMGDGETTQTQTQMRNNDVQNIGDGFGSSAHKPSSSSS 540
           VDSLTEQASASQESIQTKPSKSDMGD ET QTQTQMRNNDVQNIGDGFGSSAHKPSSSSS
Sbjct: 481 VDSLTEQASASQESIQTKPSKSDMGDDETAQTQTQMRNNDVQNIGDGFGSSAHKPSSSSS 540

Query: 541 LNSISGESLLNDSRHESGEGSQFEQKTMSVKRGGEMVQVNYKVYIPKRAPGLSRRQLKR 598
           LNSISGE+LLN+SRHESGEGSQFEQKTMSVKRGGEMVQVNYKVYIPKRAPGLSRRQLKR
Sbjct: 541 LNSISGENLLNESRHESGEGSQFEQKTMSVKRGGEMVQVNYKVYIPKRAPGLSRRQLKR 599

BLAST of CmoCh01G012730 vs. NCBI nr
Match: XP_023525531.1 (uncharacterized protein LOC111789118 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1035.8 bits (2677), Expect = 1.5e-298
Identity = 559/582 (96.05%), Postives = 569/582 (97.77%), Query Frame = 0

Query: 18  QRSRRKSRSSRKLKS--MRYRHDSPSGSDNDSESSTSLSSSSTEDDEKVGRSRSKMRKNA 77
           +RSRRKSRSSRKLKS  +RYRHDSPSGSDND ESSTSLSSSSTEDDEKVGRSRSKMRKNA
Sbjct: 36  KRSRRKSRSSRKLKSKKLRYRHDSPSGSDNDFESSTSLSSSSTEDDEKVGRSRSKMRKNA 95

Query: 78  KKRAKKRSHDRQRRDYSPHPRKRKHSKRDECCEMKKSNKKKRKRDASVRATSSDSLSCST 137
           KKRAKKRSHDRQRRDYSPHPRKRKHSKRDEC EMKKSNKKKRKRDASVRATSSDSLSCST
Sbjct: 96  KKRAKKRSHDRQRRDYSPHPRKRKHSKRDECWEMKKSNKKKRKRDASVRATSSDSLSCST 155

Query: 138 CGDGSTTSNEREIDRRKGRSRKRKENMGKIERSRYWSKSHSPCSLCSEGSDHQNEVENVC 197
           CGDGSTTSNEREIDRRKGRSR+RKENMGKIERSRY SKSHSPCSLCSEGSDHQNEVE+VC
Sbjct: 156 CGDGSTTSNEREIDRRKGRSRRRKENMGKIERSRYRSKSHSPCSLCSEGSDHQNEVEDVC 215

Query: 198 YVENNFRRLRSVIVVVGEEDKLETFDGNELQENVTHQPDHDHPSFGDINRNDGMSNRELD 257
           YVENNFRRLRSVIV+VGEEDKLETFDGNELQENVTHQPDHDHPSFGDINRNDGMSNRELD
Sbjct: 216 YVENNFRRLRSVIVIVGEEDKLETFDGNELQENVTHQPDHDHPSFGDINRNDGMSNRELD 275

Query: 258 NLISEEAPVIITDNRNSIVVKDDGVQNEGSNNNHGGSTHDHPLYERKNGCSVNTDDTNCI 317
           NLISEEAPVIITDNRNSIVVKDDGVQNEGSNNNHGGSTHDHPLYERKNGCSVNTDDTNCI
Sbjct: 276 NLISEEAPVIITDNRNSIVVKDDGVQNEGSNNNHGGSTHDHPLYERKNGCSVNTDDTNCI 335

Query: 318 DLESILRQRALENLRKYKRVLPRNVETPANYEVDNSNDAKQLDSPVSKLVHVTSPRDEAG 377
           DLESILRQRALENLRKYKRVLPRNVETPAN EVDNSNDAKQLDSPVSK VHVTSPRDEAG
Sbjct: 336 DLESILRQRALENLRKYKRVLPRNVETPANCEVDNSNDAKQLDSPVSKSVHVTSPRDEAG 395

Query: 378 INGHRFSRQGGGNAVNSMIIENGVKSTDEMDSAVASTYDPVYSSQHLGKISNGSNDMNEL 437
           ING RFSRQGGGNAVNSMIIENGVKSTDEMDSAVASTYDPVYSSQ LGK+SNGSND+NEL
Sbjct: 396 INGDRFSRQGGGNAVNSMIIENGVKSTDEMDSAVASTYDPVYSSQRLGKVSNGSNDLNEL 455

Query: 438 KQHISSVDQEVVNDSICHMADADICPTTNRSNLVIAALKPESNVDSLTEQASASQESIQT 497
           KQHISSVDQEVVNDSIC  ADADICPTTNRSNLVIAALKPESNVDSLTEQASASQESIQT
Sbjct: 456 KQHISSVDQEVVNDSICQKADADICPTTNRSNLVIAALKPESNVDSLTEQASASQESIQT 515

Query: 498 KPSKSDMGDGETTQTQTQMRNNDVQNIGDGFGSSAHKPSSSSSLNSISGESLLNDSRHES 557
           KPSKS+MGDGET QTQTQMRNNDVQNIGDGFGS AHKPSSSSSLNSISGE+LLN+SRHES
Sbjct: 516 KPSKSNMGDGETAQTQTQMRNNDVQNIGDGFGSPAHKPSSSSSLNSISGENLLNESRHES 575

Query: 558 GEGSQFEQKTMSVKRGGEMVQVNYKVYIPKRAPGLSRRQLKR 598
           GEGSQFEQKTMSVKRGGEMVQVNYKVYIPKRAPGLSRRQLKR
Sbjct: 576 GEGSQFEQKTMSVKRGGEMVQVNYKVYIPKRAPGLSRRQLKR 617

BLAST of CmoCh01G012730 vs. NCBI nr
Match: XP_022941381.1 (pre-mRNA-splicing factor CWC22 homolog isoform X3 [Cucurbita moschata])

HSP 1 Score: 967.2 bits (2499), Expect = 6.4e-278
Identity = 530/580 (91.38%), Postives = 531/580 (91.55%), Query Frame = 0

Query: 18  QRSRRKSRSSRKLKSMRYRHDSPSGSDNDSESSTSLSSSSTEDDEKVGRSRSKMRKNAKK 77
           +RSRRKSRSSRKLKSMRYRHDSPSGSDNDSESSTSLSSSSTEDDEKVGRSRSKMRKNAKK
Sbjct: 36  KRSRRKSRSSRKLKSMRYRHDSPSGSDNDSESSTSLSSSSTEDDEKVGRSRSKMRKNAKK 95

Query: 78  RAKKRSHDRQRRDYSPHPRKRKHSKRDECCEMKKSNKKKRKRDASVRATSSDSLSCSTCG 137
           RAKKRSHDRQRRDYSPHPRKRKHSKRDECCEMKKSNKKKRKRDASVRATSSDSLSCSTCG
Sbjct: 96  RAKKRSHDRQRRDYSPHPRKRKHSKRDECCEMKKSNKKKRKRDASVRATSSDSLSCSTCG 155

Query: 138 DGSTTSNEREIDRRKGRSRKRKENMGKIERSRYWSKSHSPCSLCSEGSDHQNEVENVCYV 197
           DGSTTSNEREIDRRKGRSRKRKENMGKIERSRYWSKSHSPCSLCSEGSDHQNEVENVCYV
Sbjct: 156 DGSTTSNEREIDRRKGRSRKRKENMGKIERSRYWSKSHSPCSLCSEGSDHQNEVENVCYV 215

Query: 198 ENNFRRLRSVIVVVGEEDKLETFDGNELQENVTHQPDHDHPSFGDINRNDGMSNRELDNL 257
           ENNFRRLRSVIVVVGEEDKLETFDGNELQENVTHQPDHDHPSFGDINRNDGMSNRELDNL
Sbjct: 216 ENNFRRLRSVIVVVGEEDKLETFDGNELQENVTHQPDHDHPSFGDINRNDGMSNRELDNL 275

Query: 258 ISEEAPVIITDNRNSIVVKDDGVQNEGSNNNHGGSTHDHPLYERKNGCSVNTDDTNCIDL 317
           ISEEAPVIITDNRNSIVVKDDGVQNEGSNNNHGGSTHDHPLYERKNGCSVNTDDTNCIDL
Sbjct: 276 ISEEAPVIITDNRNSIVVKDDGVQNEGSNNNHGGSTHDHPLYERKNGCSVNTDDTNCIDL 335

Query: 318 ESILRQRALENLRKYKRVLPRNVETPANYEVDNSNDAKQLDSPVSKLVHVTSPRDEAGIN 377
           ESILRQRALENLRKYKRVLPRNVETPANYEVDNSNDAKQLDSPVSKLVHVTSPRDEAGIN
Sbjct: 336 ESILRQRALENLRKYKRVLPRNVETPANYEVDNSNDAKQLDSPVSKLVHVTSPRDEAGIN 395

Query: 378 GHRFSRQGGGNAVNSMIIENGVKSTDEMDSAVASTYDPVYSSQHLGKISNGSNDMNELKQ 437
           GHRFSRQGGGNAVNSMIIENGVKSTDEMDSAVASTYDPVYSSQHL               
Sbjct: 396 GHRFSRQGGGNAVNSMIIENGVKSTDEMDSAVASTYDPVYSSQHL--------------- 455

Query: 438 HISSVDQEVVNDSICHMADADICPTTNRSNLVIAALKPESNVDSLTEQASASQESIQTKP 497
                                             ALKPESNVDSLTEQASASQESIQTKP
Sbjct: 456 ----------------------------------ALKPESNVDSLTEQASASQESIQTKP 515

Query: 498 SKSDMGDGETTQTQTQMRNNDVQNIGDGFGSSAHKPSSSSSLNSISGESLLNDSRHESGE 557
           SKSDMGDGETTQTQTQMRNNDVQNIGDGFGSSAHKPSSSSSLNSISGESLLNDSRHESGE
Sbjct: 516 SKSDMGDGETTQTQTQMRNNDVQNIGDGFGSSAHKPSSSSSLNSISGESLLNDSRHESGE 566

Query: 558 GSQFEQKTMSVKRGGEMVQVNYKVYIPKRAPGLSRRQLKR 598
           GSQFEQKTMSVKRGGEMVQVNYKVYIPKRAPGLSRRQLKR
Sbjct: 576 GSQFEQKTMSVKRGGEMVQVNYKVYIPKRAPGLSRRQLKR 566

BLAST of CmoCh01G012730 vs. TAIR 10
Match: AT5G53930.1 (unknown protein; LOCATED IN: chloroplast; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 71.6 bits (174), Expect = 2.4e-12
Identity = 181/615 (29.43%), Postives = 267/615 (43.41%), Query Frame = 0

Query: 1   MGKFSSRKKGRSKTSSSQRSRRKSRSSR-KLKSMRYRHDSPSGSDNDSESSTSLSSSSTE 60
           MGK SS  K    +S+  RS +K +S R K K +R   D    S +DS    SL SSS +
Sbjct: 1   MGKSSSSSKIIKDSSNKLRSVKKKKSKRNKSKKIRRIKDESESSGSDS----SLYSSSED 60

Query: 61  DDEKVGRSRSKMRKNAKKRAKKRSHDRQRRDYSPHPR---KRKHSKR-DECCEMKKS--- 120
           D  +  + RSK+   +KKR++KR    +  D S   R   K+K SKR DE    KK    
Sbjct: 61  DYRRKKKRRSKL---SKKRSRKRYSSSESDDDSDDDRLLKKKKRSKRKDENVGKKKKKVV 120

Query: 121 NKKKRKRDASVRATSSDSLSCSTCGDGSTTSNEREIDRRKGRSRKRKENMGKIERSRYWS 180
           ++K+RKRD S  +TSS+     +  DGS      E D  K  SR R   +GK++ SR  S
Sbjct: 121 SRKRRKRDLSSSSTSSE----QSDNDGS------ESDDGKRWSRDRGRRLGKVKDSR--S 180

Query: 181 KSHSPCSLCSEGSDHQNEVENVCYVENNFRRLRSVIVV---VGEEDKLETFDGNELQENV 240
           +S       SE  D   + E+    E N RRL+S++VV    G  ++ E  D        
Sbjct: 181 RSRDELEGESEEPDECWQGEDEVIPEKNPRRLKSIVVVSYNYGNGERKEEDD-------- 240

Query: 241 THQPDHDHPSFGDINRNDGMSNRELD-NLISEEAPVIITDNRNSIVVKDDGVQNEGSNNN 300
                       D+    G  NREL  +  S+E      D+ + I   D+G      +  
Sbjct: 241 -----------RDVYMTRGGGNRELGYSEDSDEMDGESIDSYSRIRADDNGFGEYNKSET 300

Query: 301 HGGSTHDHPLYERKNGCSVNTDDTNCIDLESILRQRALENLRKYKRVLPRNVETPANYEV 360
              S  D+ L           DD    DLE+IL++RALENL++++ V             
Sbjct: 301 SKVSHTDNSL----------KDD----DLEAILKKRALENLKRFRGV------------T 360

Query: 361 DNSNDAKQLDSPVSKLVHVTSPRDEAGINGHRFSRQGGGNAVNSMIIENGVKSTDEMDSA 420
             S  AK+  S VS+   +    ++     H    Q                     DSA
Sbjct: 361 QKSGIAKKEVSSVSEGEPMQIESEKVESQDHDLMEQ------------------KLCDSA 420

Query: 421 VASTYDPVYSSQHLGKISNGSNDMNELKQHISSVDQEVVNDSICHMADADICPTTNRSNL 480
           V+   +   +S+ +  + N       L    S  DQ+   D+      + +   T +  L
Sbjct: 421 VSKDLE---NSEKILHVINVKESGTALANSASQQDQQ-SGDTAKVKVSSGLSSCTTKRKL 480

Query: 481 VIAALKPESNVDSLTEQASASQESIQTKPSKSDMGDGETTQTQTQMRNNDVQNIGDGFGS 540
           V   L  +S   +  ++AS SQ++       S +       T   +  N+ ++I     S
Sbjct: 481 VRPVLSKDSLNLASKKEASGSQDAEAESIDGSTVDKNCLESTLALVTKNEGEHIEPTKVS 529

Query: 541 SAHKPSSSSSLNSISGESLLNDSR------HESGEGSQFEQKTMSVKRGGEMVQVNYKVY 598
           S     SSS  ++   + +   S+       E+ + SQ+EQKTM+V RGGEMVQV+YKVY
Sbjct: 541 STLNAESSSHADTEEVDEVKGGSQSEQKTIDETKDESQYEQKTMTVMRGGEMVQVSYKVY 529

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1FTH50.0e+00100.00pre-mRNA-splicing factor CWC22 homolog isoform X2 OS=Cucurbita moschata OX=3662 ... [more]
A0A6J1FN600.0e+0099.83pre-mRNA-splicing factor CWC22 homolog isoform X1 OS=Cucurbita moschata OX=3662 ... [more]
A0A6J1FKY73.1e-27891.38pre-mRNA-splicing factor CWC22 homolog isoform X3 OS=Cucurbita moschata OX=3662 ... [more]
A0A6J1CDR01.5e-21674.96uncharacterized protein LOC111010601 OS=Momordica charantia OX=3673 GN=LOC111010... [more]
A0A6J1F6D17.0e-20671.52uncharacterized protein LOC111442542 isoform X1 OS=Cucurbita moschata OX=3662 GN... [more]
Match NameE-valueIdentityDescription
XP_022941380.10.0e+00100.00pre-mRNA-splicing factor CWC22 homolog isoform X2 [Cucurbita moschata][more]
XP_022941379.10.0e+0099.83pre-mRNA-splicing factor CWC22 homolog isoform X1 [Cucurbita moschata][more]
KAG7037416.14.2e-30695.99hypothetical protein SDJN02_01042 [Cucurbita argyrosperma subsp. argyrosperma][more]
XP_023525531.11.5e-29896.05uncharacterized protein LOC111789118 isoform X1 [Cucurbita pepo subsp. pepo][more]
XP_022941381.16.4e-27891.38pre-mRNA-splicing factor CWC22 homolog isoform X3 [Cucurbita moschata][more]
Match NameE-valueIdentityDescription
AT5G53930.12.4e-1229.43unknown protein; LOCATED IN: chloroplast; Has 1807 Blast hits to 1807 proteins i... [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 481..549
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 69..100
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..32
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 125..142
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 44..58
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..163
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 481..572
NoneNo IPR availablePANTHERPTHR36808TRANSCRIPTIONAL REGULATOR ATRX-LIKE PROTEINcoord: 1..597

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh01G012730.1CmoCh01G012730.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane