CmoCh01G012220 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh01G012220
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Protein of unknown function, DUF538
Location	Cmo_Chr01: 9827829 .. 9829100 (-)
RNA-Seq Expression	CmoCh01G012220
Synteny	CmoCh01G012220

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCTCATCTCATTCTTCTTCCCCCAAACAGTGTCCCCCACCTTTCTCTATCACAAAACCCCATCAGCGTCCATCTCTCTCTGTCTCTCTCTGAAATTCTCCAGCCATGGCTCTGTTTCGCAGCCAGAATCTTAGCCTTTGGATCTCAATGATCTTGTTTTTGGGTTTTTGTTCTTGTTTTTGCTCTAATTCTAAGGACGATTCTTCAATTCATGAGCTTCTTCGATCCATGGGGCTGCCGGCGGGGCTTGTGCCGAAGCAAGTGAAGTCTTACACAGTGGCTGAAAATGGTCGGTTGGAAGTGTTCTTGGATGGTCCATGTATGGCTAAGTATGAAAACAGAGTGATTTTTGAGAGTGTTTTTAGTGCAAATCTTAGCTATGGGAGCTTGATTGGAGTGCAGGGAATGTCTCAAGAAGAGCTTTTTCTATGGCTCCCTGTTAAAGATATCATTGTTAATTATCCTACCTCCGGTGTGGTACTCATCGACATTGGTGTCGCTCATAAACAGCTCTCTCTGTCCCTCTTTGAAGATCCTCCTGATTGTAGTATCCCTCAAGGTGAATTCTCTTAGATCTCTTCGATTCTTATGGGTTTTGTTGATTTTGATTAATGGGTTCTTCCTGTTTTTCATCAGTTCTTCATCAATGGCTTCTCTTGCCTCTGTTTCCTCTGTTTCCTCTGTTTTTGTCTCTAAATTGATGGAGCTTTCCAAATCTGTCTTTAATGGCTTCTTTTGACCATATTTTCTCCTCTCTCTTTCAATCTAAATTGATGGGTTCTTCTTGTTCTTCATCTTTCTTTTCATTAATGGCTTCTCTTGGCTCTGTTTCCTCTGTTTTTCTTCTCATTAATGGCTTCTTTCTATCTCCTCTGTTTCTTCTCTTCACAACTAACAGTTCAGCTCATTAATGGCTTCCATTCGTTCCATTTTTGGCGAGCTCCATTAATCTTTACATTCCCAAAACGTCTATGAGTTGAAAGTTAGAGACAAGAAAACATGGGAAACTTGCAGTTGAAAGCTCAAAGTTCATTATTTTTGGTTCTGTTTTGTAAAACATTATAGTAACTGAGTTTCTTTGTGTCTGGTTTTGCAGCTGCGTTCAGGAATCATCTCAGGAACCAAAGAGCCTTTGAATCTCTTAGATAAGAGAGCCAAAAATAATAATAATAATAATAAATAATAAAAAAGTTGTCAAATTCAAGTTTCCACCTTTTGTATTTATATCATTTTATTGTGTAATAATTTGTATTTTATTTTATAGTTAAAAAAA

mRNA sequence

GCTCATCTCATTCTTCTTCCCCCAAACAGTGTCCCCCACCTTTCTCTATCACAAAACCCCATCAGCGTCCATCTCTCTCTGTCTCTCTCTGAAATTCTCCAGCCATGGCTCTGTTTCGCAGCCAGAATCTTAGCCTTTGGATCTCAATGATCTTGTTTTTGGGTTTTTGTTCTTGTTTTTGCTCTAATTCTAAGGACGATTCTTCAATTCATGAGCTTCTTCGATCCATGGGGCTGCCGGCGGGGCTTGTGCCGAAGCAAGTGAAGTCTTACACAGTGGCTGAAAATGGTCGGTTGGAAGTGTTCTTGGATGGTCCATGTATGGCTAAGTATGAAAACAGAGTGATTTTTGAGAGTGTTTTTAGTGCAAATCTTAGCTATGGGAGCTTGATTGGAGTGCAGGGAATGTCTCAAGAAGAGCTTTTTCTATGGCTCCCTGTTAAAGATATCATTGTTAATTATCCTACCTCCGGTGTGGTACTCATCGACATTGGTGTCGCTCATAAACAGCTCTCTCTGTCCCTCTTTGAAGATCCTCCTGATTGTAGTATCCCTCAAGCTGCGTTCAGGAATCATCTCAGGAACCAAAGAGCCTTTGAATCTCTTAGATAAGAGAGCCAAAAATAATAATAATAATAATAAATAATAAAAAAGTTGTCAAATTCAAGTTTCCACCTTTTGTATTTATATCATTTTATTGTGTAATAATTTGTATTTTATTTTATAGTTAAAAAAA

Coding sequence (CDS)

ATGGCTCTGTTTCGCAGCCAGAATCTTAGCCTTTGGATCTCAATGATCTTGTTTTTGGGTTTTTGTTCTTGTTTTTGCTCTAATTCTAAGGACGATTCTTCAATTCATGAGCTTCTTCGATCCATGGGGCTGCCGGCGGGGCTTGTGCCGAAGCAAGTGAAGTCTTACACAGTGGCTGAAAATGGTCGGTTGGAAGTGTTCTTGGATGGTCCATGTATGGCTAAGTATGAAAACAGAGTGATTTTTGAGAGTGTTTTTAGTGCAAATCTTAGCTATGGGAGCTTGATTGGAGTGCAGGGAATGTCTCAAGAAGAGCTTTTTCTATGGCTCCCTGTTAAAGATATCATTGTTAATTATCCTACCTCCGGTGTGGTACTCATCGACATTGGTGTCGCTCATAAACAGCTCTCTCTGTCCCTCTTTGAAGATCCTCCTGATTGTAGTATCCCTCAAGCTGCGTTCAGGAATCATCTCAGGAACCAAAGAGCCTTTGAATCTCTTAGATAA

Protein sequence

MALFRSQNLSLWISMILFLGFCSCFCSNSKDDSSIHELLRSMGLPAGLVPKQVKSYTVAENGRLEVFLDGPCMAKYENRVIFESVFSANLSYGSLIGVQGMSQEELFLWLPVKDIIVNYPTSGVVLIDIGVAHKQLSLSLFEDPPDCSIPQAAFRNHLRNQRAFESLR

Homology

[Close]

BLAST of CmoCh01G012220 vs. ExPASy TrEMBL
Match: A0A6J1FNJ8 (uncharacterized protein LOC111445879 OS=Cucurbita moschata OX=3662 GN=LOC111445879 PE=4 SV=1)

HSP 1 Score: 341.7 bits (875), Expect = 1.8e-90
Identity = 168/168 (100.00%), Postives = 168/168 (100.00%), Query Frame = 0


Query: 1   MALFRSQNLSLWISMILFLGFCSCFCSNSKDDSSIHELLRSMGLPAGLVPKQVKSYTVAE 60
           MALFRSQNLSLWISMILFLGFCSCFCSNSKDDSSIHELLRSMGLPAGLVPKQVKSYTVAE
Sbjct: 1   MALFRSQNLSLWISMILFLGFCSCFCSNSKDDSSIHELLRSMGLPAGLVPKQVKSYTVAE 60

Query: 61  NGRLEVFLDGPCMAKYENRVIFESVFSANLSYGSLIGVQGMSQEELFLWLPVKDIIVNYP 120
           NGRLEVFLDGPCMAKYENRVIFESVFSANLSYGSLIGVQGMSQEELFLWLPVKDIIVNYP
Sbjct: 61  NGRLEVFLDGPCMAKYENRVIFESVFSANLSYGSLIGVQGMSQEELFLWLPVKDIIVNYP 120

Query: 121 TSGVVLIDIGVAHKQLSLSLFEDPPDCSIPQAAFRNHLRNQRAFESLR 169
           TSGVVLIDIGVAHKQLSLSLFEDPPDCSIPQAAFRNHLRNQRAFESLR
Sbjct: 121 TSGVVLIDIGVAHKQLSLSLFEDPPDCSIPQAAFRNHLRNQRAFESLR 168

[Close]

BLAST of CmoCh01G012220 vs. ExPASy TrEMBL
Match: A0A6J1J2E3 (uncharacterized protein LOC111480695 OS=Cucurbita maxima OX=3661 GN=LOC111480695 PE=4 SV=1)

HSP 1 Score: 332.8 bits (852), Expect = 8.3e-88
Identity = 164/168 (97.62%), Postives = 165/168 (98.21%), Query Frame = 0


Query: 1   MALFRSQNLSLWISMILFLGFCSCFCSNSKDDSSIHELLRSMGLPAGLVPKQVKSYTVAE 60
           MALFRSQNLSLWISMILFLGFCSCFC NSKDDSSIHELLRSMGLPAGLVPKQVKSYTVAE
Sbjct: 1   MALFRSQNLSLWISMILFLGFCSCFCCNSKDDSSIHELLRSMGLPAGLVPKQVKSYTVAE 60

Query: 61  NGRLEVFLDGPCMAKYENRVIFESVFSANLSYGSLIGVQGMSQEELFLWLPVKDIIVNYP 120
           NGRLEVFLDGPCMAKYENRVIFESVFSANLSYGSLIGV+GMSQEELFLWLPVKDIIVNYP
Sbjct: 61  NGRLEVFLDGPCMAKYENRVIFESVFSANLSYGSLIGVEGMSQEELFLWLPVKDIIVNYP 120

Query: 121 TSGVVLIDIGVAHKQLSLSLFEDPPDCSIPQAAFRNHLRNQRAFESLR 169
           TSGVVLIDIGVAHKQLSLSLFEDPPDCSIPQAAF N LRNQRAFESLR
Sbjct: 121 TSGVVLIDIGVAHKQLSLSLFEDPPDCSIPQAAFGNRLRNQRAFESLR 168

[Close]

BLAST of CmoCh01G012220 vs. ExPASy TrEMBL
Match: A0A6J1FGJ2 (uncharacterized protein LOC111443705 OS=Cucurbita moschata OX=3662 GN=LOC111443705 PE=4 SV=1)

HSP 1 Score: 266.5 bits (680), Expect = 7.3e-68
Identity = 141/169 (83.43%), Postives = 150/169 (88.76%), Query Frame = 0


Query: 3   LFRSQNLSLWIS-MILFLGFC-SCFCSNS-KDDSSIHELLRSMGLPAGLVPKQVKSYTVA 62
           LF S N  + IS +ILF+GFC SC CSNS KD SSIH LLRSMGLPAGLVPKQVKSYT+ 
Sbjct: 4   LFGSWNSRIRISIIILFVGFCSSCCCSNSRKDSSSIHSLLRSMGLPAGLVPKQVKSYTLG 63

Query: 63  ENGRLEVFLDGPCMAKYENRVIFESVFSANLSYGSLIGVQGMSQEELFLWLPVKDIIVNY 122
           EN RLEV+LDGPCMAKYENRVIFESVFSANLSYGSLIGVQGMSQEELFLWLPVKDIIVN 
Sbjct: 64  ENDRLEVYLDGPCMAKYENRVIFESVFSANLSYGSLIGVQGMSQEELFLWLPVKDIIVND 123

Query: 123 PTSGVVLIDIGVAHKQLSLSLFEDPPDCSIPQAAFRNHLRNQRAFESLR 169
           P+SGV+LIDIGVAHKQLSLSLFEDPPDC+ PQAA RN LR +R FESLR
Sbjct: 124 PSSGVILIDIGVAHKQLSLSLFEDPPDCN-PQAALRNPLRKRRDFESLR 171

[Close]

BLAST of CmoCh01G012220 vs. ExPASy TrEMBL
Match: A0A6J1IHB3 (uncharacterized protein LOC111476944 OS=Cucurbita maxima OX=3661 GN=LOC111476944 PE=4 SV=1)

HSP 1 Score: 265.4 bits (677), Expect = 1.6e-67
Identity = 140/169 (82.84%), Postives = 150/169 (88.76%), Query Frame = 0


Query: 3   LFRSQNLSLWIS-MILFLGFC-SCFCSNS-KDDSSIHELLRSMGLPAGLVPKQVKSYTVA 62
           LF S N  + IS +ILF+GFC SC CSNS KD SSIH LLRSMGLPAGLVPKQVKSYT+ 
Sbjct: 4   LFGSWNSRIRISIIILFVGFCSSCCCSNSRKDSSSIHSLLRSMGLPAGLVPKQVKSYTLG 63

Query: 63  ENGRLEVFLDGPCMAKYENRVIFESVFSANLSYGSLIGVQGMSQEELFLWLPVKDIIVNY 122
           EN RLEV+LDGPCMAKYENRVIFESVFSANLSYGSLIGV+GMSQEELFLWLPVKDIIVN 
Sbjct: 64  ENDRLEVYLDGPCMAKYENRVIFESVFSANLSYGSLIGVEGMSQEELFLWLPVKDIIVND 123

Query: 123 PTSGVVLIDIGVAHKQLSLSLFEDPPDCSIPQAAFRNHLRNQRAFESLR 169
           P+SGV+LIDIGVAHKQLSLSLFEDPPDC+ PQAA RN LR +R FESLR
Sbjct: 124 PSSGVILIDIGVAHKQLSLSLFEDPPDCN-PQAALRNPLRKRRDFESLR 171

[Close]

BLAST of CmoCh01G012220 vs. ExPASy TrEMBL
Match: A0A6J1CC85 (uncharacterized protein LOC111010343 OS=Momordica charantia OX=3673 GN=LOC111010343 PE=4 SV=1)

HSP 1 Score: 259.2 bits (661), Expect = 1.2e-65
Identity = 137/173 (79.19%), Postives = 149/173 (86.13%), Query Frame = 0


Query: 1   MALF--RSQNLSLWI-SMILFLGFCSCFCSNS--KDDSSIHELLRSMGLPAGLVPKQVKS 60
           MALF   S + S WI S+IL +GF S   S+S   D+SS+HELLRSMGLPAGLVPKQVKS
Sbjct: 1   MALFGSHSHSHSHWISSIILLVGFFSSSSSSSSISDESSVHELLRSMGLPAGLVPKQVKS 60

Query: 61  YTVAENGRLEVFLDGPCMAKYENRVIFESVFSANLSYGSLIGVQGMSQEELFLWLPVKDI 120
           YTVAENGRLEV LD PCMA YENRVIF+SVFSANLSYGSLIGVQG+SQEELFLWLPVKDI
Sbjct: 61  YTVAENGRLEVLLDAPCMATYENRVIFDSVFSANLSYGSLIGVQGLSQEELFLWLPVKDI 120

Query: 121 IVNYPTSGVVLIDIGVAHKQLSLSLFEDPPDCSIPQAAFRNHLRNQRAFESLR 169
           IVNYPTSGV+LIDIGVAHKQLSLSLFEDPPDC+ PQ + RN LR +R FESLR
Sbjct: 121 IVNYPTSGVILIDIGVAHKQLSLSLFEDPPDCN-PQVSLRNPLRKERGFESLR 172

[Close]

BLAST of CmoCh01G012220 vs. NCBI nr
Match: XP_022940173.1 (uncharacterized protein LOC111445879 [Cucurbita moschata] >KAG6607837.1 hypothetical protein SDJN03_01179, partial [Cucurbita argyrosperma subsp. sororia] >KAG7015235.1 hypothetical protein SDJN02_22868 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 341.7 bits (875), Expect = 3.7e-90
Identity = 168/168 (100.00%), Postives = 168/168 (100.00%), Query Frame = 0


Query: 1   MALFRSQNLSLWISMILFLGFCSCFCSNSKDDSSIHELLRSMGLPAGLVPKQVKSYTVAE 60
           MALFRSQNLSLWISMILFLGFCSCFCSNSKDDSSIHELLRSMGLPAGLVPKQVKSYTVAE
Sbjct: 1   MALFRSQNLSLWISMILFLGFCSCFCSNSKDDSSIHELLRSMGLPAGLVPKQVKSYTVAE 60

Query: 61  NGRLEVFLDGPCMAKYENRVIFESVFSANLSYGSLIGVQGMSQEELFLWLPVKDIIVNYP 120
           NGRLEVFLDGPCMAKYENRVIFESVFSANLSYGSLIGVQGMSQEELFLWLPVKDIIVNYP
Sbjct: 61  NGRLEVFLDGPCMAKYENRVIFESVFSANLSYGSLIGVQGMSQEELFLWLPVKDIIVNYP 120

Query: 121 TSGVVLIDIGVAHKQLSLSLFEDPPDCSIPQAAFRNHLRNQRAFESLR 169
           TSGVVLIDIGVAHKQLSLSLFEDPPDCSIPQAAFRNHLRNQRAFESLR
Sbjct: 121 TSGVVLIDIGVAHKQLSLSLFEDPPDCSIPQAAFRNHLRNQRAFESLR 168

[Close]

BLAST of CmoCh01G012220 vs. NCBI nr
Match: XP_022981634.1 (uncharacterized protein LOC111480695 [Cucurbita maxima])

HSP 1 Score: 332.8 bits (852), Expect = 1.7e-87
Identity = 164/168 (97.62%), Postives = 165/168 (98.21%), Query Frame = 0


Query: 1   MALFRSQNLSLWISMILFLGFCSCFCSNSKDDSSIHELLRSMGLPAGLVPKQVKSYTVAE 60
           MALFRSQNLSLWISMILFLGFCSCFC NSKDDSSIHELLRSMGLPAGLVPKQVKSYTVAE
Sbjct: 1   MALFRSQNLSLWISMILFLGFCSCFCCNSKDDSSIHELLRSMGLPAGLVPKQVKSYTVAE 60

Query: 61  NGRLEVFLDGPCMAKYENRVIFESVFSANLSYGSLIGVQGMSQEELFLWLPVKDIIVNYP 120
           NGRLEVFLDGPCMAKYENRVIFESVFSANLSYGSLIGV+GMSQEELFLWLPVKDIIVNYP
Sbjct: 61  NGRLEVFLDGPCMAKYENRVIFESVFSANLSYGSLIGVEGMSQEELFLWLPVKDIIVNYP 120

Query: 121 TSGVVLIDIGVAHKQLSLSLFEDPPDCSIPQAAFRNHLRNQRAFESLR 169
           TSGVVLIDIGVAHKQLSLSLFEDPPDCSIPQAAF N LRNQRAFESLR
Sbjct: 121 TSGVVLIDIGVAHKQLSLSLFEDPPDCSIPQAAFGNRLRNQRAFESLR 168

[Close]

BLAST of CmoCh01G012220 vs. NCBI nr
Match: XP_022937405.1 (uncharacterized protein LOC111443705 [Cucurbita moschata])

HSP 1 Score: 266.5 bits (680), Expect = 1.5e-67
Identity = 141/169 (83.43%), Postives = 150/169 (88.76%), Query Frame = 0


Query: 3   LFRSQNLSLWIS-MILFLGFC-SCFCSNS-KDDSSIHELLRSMGLPAGLVPKQVKSYTVA 62
           LF S N  + IS +ILF+GFC SC CSNS KD SSIH LLRSMGLPAGLVPKQVKSYT+ 
Sbjct: 4   LFGSWNSRIRISIIILFVGFCSSCCCSNSRKDSSSIHSLLRSMGLPAGLVPKQVKSYTLG 63

Query: 63  ENGRLEVFLDGPCMAKYENRVIFESVFSANLSYGSLIGVQGMSQEELFLWLPVKDIIVNY 122
           EN RLEV+LDGPCMAKYENRVIFESVFSANLSYGSLIGVQGMSQEELFLWLPVKDIIVN 
Sbjct: 64  ENDRLEVYLDGPCMAKYENRVIFESVFSANLSYGSLIGVQGMSQEELFLWLPVKDIIVND 123

Query: 123 PTSGVVLIDIGVAHKQLSLSLFEDPPDCSIPQAAFRNHLRNQRAFESLR 169
           P+SGV+LIDIGVAHKQLSLSLFEDPPDC+ PQAA RN LR +R FESLR
Sbjct: 124 PSSGVILIDIGVAHKQLSLSLFEDPPDCN-PQAALRNPLRKRRDFESLR 171

[Close]

BLAST of CmoCh01G012220 vs. NCBI nr
Match: XP_022976596.1 (uncharacterized protein LOC111476944 [Cucurbita maxima] >KAG6592007.1 hypothetical protein SDJN03_14353, partial [Cucurbita argyrosperma subsp. sororia] >KAG7024881.1 hypothetical protein SDJN02_13701, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 265.4 bits (677), Expect = 3.4e-67
Identity = 140/169 (82.84%), Postives = 150/169 (88.76%), Query Frame = 0


Query: 3   LFRSQNLSLWIS-MILFLGFC-SCFCSNS-KDDSSIHELLRSMGLPAGLVPKQVKSYTVA 62
           LF S N  + IS +ILF+GFC SC CSNS KD SSIH LLRSMGLPAGLVPKQVKSYT+ 
Sbjct: 4   LFGSWNSRIRISIIILFVGFCSSCCCSNSRKDSSSIHSLLRSMGLPAGLVPKQVKSYTLG 63

Query: 63  ENGRLEVFLDGPCMAKYENRVIFESVFSANLSYGSLIGVQGMSQEELFLWLPVKDIIVNY 122
           EN RLEV+LDGPCMAKYENRVIFESVFSANLSYGSLIGV+GMSQEELFLWLPVKDIIVN 
Sbjct: 64  ENDRLEVYLDGPCMAKYENRVIFESVFSANLSYGSLIGVEGMSQEELFLWLPVKDIIVND 123

Query: 123 PTSGVVLIDIGVAHKQLSLSLFEDPPDCSIPQAAFRNHLRNQRAFESLR 169
           P+SGV+LIDIGVAHKQLSLSLFEDPPDC+ PQAA RN LR +R FESLR
Sbjct: 124 PSSGVILIDIGVAHKQLSLSLFEDPPDCN-PQAALRNPLRKRRDFESLR 171

[Close]

BLAST of CmoCh01G012220 vs. NCBI nr
Match: XP_038900271.1 (uncharacterized protein LOC120087352 [Benincasa hispida])

HSP 1 Score: 263.5 bits (672), Expect = 1.3e-66
Identity = 134/169 (79.29%), Postives = 145/169 (85.80%), Query Frame = 0


Query: 2   ALFRSQNLSLWISM--ILFLGFCSCFCSNSKDDSSIHELLRSMGLPAGLVPKQVKSYTVA 61
           ALF S NL +WIS+  IL LG C   C+  +D SSIH LLRSMGLPAGLVPKQ KSYT+ 
Sbjct: 3   ALFGSWNLRIWISIVTILLLGLCR-NCNCGEDSSSIHSLLRSMGLPAGLVPKQAKSYTLG 62

Query: 62  ENGRLEVFLDGPCMAKYENRVIFESVFSANLSYGSLIGVQGMSQEELFLWLPVKDIIVNY 121
           ENGRLEV+LD PCMAKYENRVIF++VFSANLSYGSLIGV+GMSQEELFLWLPVKDIIVNY
Sbjct: 63  ENGRLEVYLDAPCMAKYENRVIFDTVFSANLSYGSLIGVEGMSQEELFLWLPVKDIIVNY 122

Query: 122 PTSGVVLIDIGVAHKQLSLSLFEDPPDCSIPQAAFRNHLRNQRAFESLR 169
           PTSGV+LIDIGVAHKQLSLSLFEDPPDC+ PQ   RN LR QR FESLR
Sbjct: 123 PTSGVILIDIGVAHKQLSLSLFEDPPDCN-PQVTLRNPLRKQRGFESLR 169

[Close]

BLAST of CmoCh01G012220 vs. TAIR 10
Match: AT5G54530.1 (Protein of unknown function, DUF538 )

HSP 1 Score: 171.4 bits (433), Expect = 6.2e-43
Identity = 80/133 (60.15%), Postives = 101/133 (75.94%), Query Frame = 0


Query: 34  SIHELLRSMGLPAGLVPKQVKSYTVAENGRLEVFLDGPCMAKYENRVIFESVFSANLSYG 93
           ++H++LRS GLPAGL+P++V SY +  +GRLEVFL  PC AK+E  V FE+V   NLSYG
Sbjct: 28  TVHDVLRSEGLPAGLLPQEVDSYILHNDGRLEVFLAAPCYAKFETNVHFEAVVRGNLSYG 87

Query: 94  SLIGVQGMSQEELFLWLPVKDIIVNYPTSGVVLIDIGVAHKQLSLSLFEDPPDCSIPQAA 153
           SL+GV+G+SQ+ELFLWL VKDI+V  P SGV++ DIGVA KQLSLSLFEDPP C  P   
Sbjct: 88  SLVGVEGLSQKELFLWLQVKDIVVENPNSGVIVFDIGVAFKQLSLSLFEDPPKCK-PDGV 147

Query: 154 FRNHLRNQRAFES 167
            +  +R  R FE+
Sbjct: 148 LKKKMRRDRGFEA 159

[Close]

BLAST of CmoCh01G012220 vs. TAIR 10
Match: AT1G61667.1 (Protein of unknown function, DUF538 )

HSP 1 Score: 155.2 bits (391), Expect = 4.6e-38
Identity = 80/139 (57.55%), Postives = 99/139 (71.22%), Query Frame = 0


Query: 13  ISMILFLGFCSCFCSNSKDDSSIHELLRSMGLPAGLVPKQVKSYTVAE-NGRLEVFLDGP 72
           +SM+L L     F + S   SSI  LL + GLP GL P  V+SY++ +  G LEV L  P
Sbjct: 1   MSMLLLLLLLVPFITPS-SQSSIRNLLEARGLPGGLFPDNVESYSLDDKTGELEVQLQNP 60

Query: 73  CMAKYENRVIFESVFSANLSYGSLIGVQGMSQEELFLWLPVKDIIVNYPTSGVVLIDIGV 132
           C A++ENRV F+ V  ANLSYG L+G++G++QEELFLWLPVK I VN P+SG+VL DIGV
Sbjct: 61  CFARFENRVYFDRVIKANLSYGGLVGLEGLTQEELFLWLPVKGIAVNDPSSGLVLFDIGV 120

Query: 133 AHKQLSLSLFEDPPDCSIP 151
           AHKQ+S SLFEDPP C  P
Sbjct: 121 AHKQISRSLFEDPPVCYPP 138

[Close]

BLAST of CmoCh01G012220 vs. TAIR 10
Match: AT3G07460.1 (Protein of unknown function, DUF538 )

HSP 1 Score: 119.8 bits (299), Expect = 2.1e-27
Identity = 56/118 (47.46%), Postives = 77/118 (65.25%), Query Frame = 0


Query: 31  DDSSIHELLRSMGLPAGLVPKQVKSYTV-AENGRLEVFLDGPCMAKYENRVIFESVFSAN 90
           ++ SI E+L + GLP GL PK VK +TV  E GR  V+L+  C AKYE  + ++ + S  
Sbjct: 26  ENESIDEILLANGLPLGLFPKGVKGFTVNGETGRFSVYLNQSCQAKYETELHYDEIVSGT 85

Query: 91  LSYGSLIGVQGMSQEELFLWLPVKDIIVNYPTSGVVLIDIGVAHKQLSLSLFEDPPDC 148
           + Y  +  + G+S +ELFLWL VK I V+ P+SG++  D+GV  KQ SLSLFE P DC
Sbjct: 86  IGYAQIRDLSGISAQELFLWLQVKGIRVDVPSSGLIFFDVGVLRKQYSLSLFETPRDC 143

[Close]

BLAST of CmoCh01G012220 vs. TAIR 10
Match: AT3G07460.2 (Protein of unknown function, DUF538 )

HSP 1 Score: 119.8 bits (299), Expect = 2.1e-27
Identity = 56/118 (47.46%), Postives = 77/118 (65.25%), Query Frame = 0


Query: 31  DDSSIHELLRSMGLPAGLVPKQVKSYTV-AENGRLEVFLDGPCMAKYENRVIFESVFSAN 90
           ++ SI E+L + GLP GL PK VK +TV  E GR  V+L+  C AKYE  + ++ + S  
Sbjct: 26  ENESIDEILLANGLPLGLFPKGVKGFTVNGETGRFSVYLNQSCQAKYETELHYDEIVSGT 85

Query: 91  LSYGSLIGVQGMSQEELFLWLPVKDIIVNYPTSGVVLIDIGVAHKQLSLSLFEDPPDC 148
           + Y  +  + G+S +ELFLWL VK I V+ P+SG++  D+GV  KQ SLSLFE P DC
Sbjct: 86  IGYAQIRDLSGISAQELFLWLQVKGIRVDVPSSGLIFFDVGVLRKQYSLSLFETPRDC 143

[Close]

BLAST of CmoCh01G012220 vs. TAIR 10
Match: AT5G16380.1 (Protein of unknown function, DUF538 )

HSP 1 Score: 112.1 bits (279), Expect = 4.4e-25
Identity = 57/126 (45.24%), Postives = 82/126 (65.08%), Query Frame = 0


Query: 28  NSKDDSSIHELLRSMGLPAGLVPKQVKSYTV-AENGRLEVFLDGPCMAKYENRVIFESVF 87
           +S  D S ++ LR   LPAG+VPK V ++++  + GR  V L  PC AK+EN+  F+   
Sbjct: 24  SSLPDPSFYDYLRESNLPAGIVPKGVTNFSIDIKTGRFTVALPVPCDAKFENQFHFDYNI 83

Query: 88  SANLSYGSLIGVQGMSQEELFLWLPVKDIIVNYPTSGVVLIDIGVAHKQLSLSLFEDPPD 147
           S  LS G +  + G++Q+ELFLW  VK I V+  +SG++  D+GVA KQLSLSLFE P D
Sbjct: 84  SGVLSDGRIGNLSGVTQKELFLWFAVKGIHVDPQSSGLIHFDVGVADKQLSLSLFESPRD 143

Query: 148 CSIPQA 153
           C+  ++
Sbjct: 144 CTAAES 149

The following BLAST results are available for this feature:

BLAST of CmoCh01G012220 vs.


Match Name	E-value	Identity	Description

BLAST of CmoCh01G012220 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FNJ8	1.8e-90	100.00	uncharacterized protein LOC111445879 OS=Cucurbita moschata OX=3662 GN=LOC1114458...	[more]
A0A6J1J2E3	8.3e-88	97.62	uncharacterized protein LOC111480695 OS=Cucurbita maxima OX=3661 GN=LOC111480695...	[more]
A0A6J1FGJ2	7.3e-68	83.43	uncharacterized protein LOC111443705 OS=Cucurbita moschata OX=3662 GN=LOC1114437...	[more]
A0A6J1IHB3	1.6e-67	82.84	uncharacterized protein LOC111476944 OS=Cucurbita maxima OX=3661 GN=LOC111476944...	[more]
A0A6J1CC85	1.2e-65	79.19	uncharacterized protein LOC111010343 OS=Momordica charantia OX=3673 GN=LOC111010...	[more]

BLAST of CmoCh01G012220 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022940173.1	3.7e-90	100.00	uncharacterized protein LOC111445879 [Cucurbita moschata] >KAG6607837.1 hypothet...	[more]
XP_022981634.1	1.7e-87	97.62	uncharacterized protein LOC111480695 [Cucurbita maxima]	[more]
XP_022937405.1	1.5e-67	83.43	uncharacterized protein LOC111443705 [Cucurbita moschata]	[more]
XP_022976596.1	3.4e-67	82.84	uncharacterized protein LOC111476944 [Cucurbita maxima] >KAG6592007.1 hypothetic...	[more]
XP_038900271.1	1.3e-66	79.29	uncharacterized protein LOC120087352 [Benincasa hispida]	[more]

BLAST of CmoCh01G012220 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G54530.1	6.2e-43	60.15	Protein of unknown function, DUF538	[more]
AT1G61667.1	4.6e-38	57.55	Protein of unknown function, DUF538	[more]
AT3G07460.1	2.1e-27	47.46	Protein of unknown function, DUF538	[more]
AT3G07460.2	2.1e-27	47.46	Protein of unknown function, DUF538	[more]
AT5G16380.1	4.4e-25	45.24	Protein of unknown function, DUF538	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007493	Protein of unknown function DUF538	PFAM	PF04398	DUF538	coord: 36..142 e-value: 1.0E-24 score: 87.1
IPR007493	Protein of unknown function DUF538	PANTHER	PTHR31676	T31J12.3 PROTEIN-RELATED	coord: 12..167
IPR036758	At5g01610-like superfamily	GENE3D	2.30.240.10		coord: 24..150 e-value: 1.9E-25 score: 91.2
IPR036758	At5g01610-like superfamily	SUPERFAMILY	141562	At5g01610-like	coord: 11..147
None	No IPR available	PANTHER	PTHR31676:SF118	SUBFAMILY NOT NAMED	coord: 12..167
None	No IPR available	PROSITE	PS51257	PROKAR_LIPOPROTEIN	coord: 1..24 score: 5.0

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh01G012220.1	CmoCh01G012220.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane