Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATGTAGAACAAGAAGAGATGCAATTCCTCGGAACCTATGGAATTTTTAGAGAAACCAGCAAATTAATCTTCACATGGCGAAGGATTTTCTCCCAAATCACTCTAGCCCTAATTCTCCCTCTCTCCTTCTTGTTCCTCGCTCATATGGAGCTTTCCAATCTATTCCTAAGAAAAATCATGTACGACGAATTCATACTGGACCAAACGCGACCCCGTACAGAGTCATTCGGAAAACTCTCTGGCGTCGTTTCGTCGGAGAAGGTCTATTATTTTCTATTTCAAGTCGCGTACCTGGTTATCTTCGTCGTCCTGTCGCTCCTCTCCACCGCCGCTGTCGTCTACACCGTCGCGTCAATCTACACCGGCCGCGACGTCACCTTCAAGCCGGTGATGAGCGTCGTCCCCAAGGTCTGGAAGCGGCTCCTCCTGACATTTCTCTGCGTGTTCATCTCCTACGTCGGCTACTCCATCGCCAGCTTGTTCGTCATCATCTCCCTCCTAGTCCTCATCATCTTCATCGGCCACATCACCGCCTCCGGCGTCATACTCCTGATCTACGCCTTCCAGATCCTATACCTCGGCGGCGCGTTCTACCTGATGACGATCTGGCAGCTCTCGAACGTCGTCTCCGTTCTAGAAGATTCCTACGGATTCAAAGCCATGGCCAAGAGCTACGCCTTGGTGAAAGGGAAATTAGGGATTTCCGTGGTTATAATCCTTCTCCTAAGCCTCCCTCTCGGAACGGTGCGTTTTATGTTTGGGCATTTGGTGGTTCGTGCGGCAGCGTTGGGAGTTGTCTCCAAGGGCGTTTTGGGGATTTTGTGCTTCTTGTTGTTTTTCGTGTTCTATTTGTTGAAGCTGGTGACGGAGACGGTGTTGTATTTCGTCTGCAAATCATACCATCATGAAAATATTGACAAATCTGCCCTCTCAGACCATCTCGGAGAGTATTTGTTAGGAGAGTATGTGCCGTTGAAACCTAAGGATGTTCAACTTGAAAAAATTCAAGTTTGA
mRNA sequence
ATGGATGTAGAACAAGAAGAGATGCAATTCCTCGGAACCTATGGAATTTTTAGAGAAACCAGCAAATTAATCTTCACATGGCGAAGGATTTTCTCCCAAATCACTCTAGCCCTAATTCTCCCTCTCTCCTTCTTGTTCCTCGCTCATATGGAGCTTTCCAATCTATTCCTAAGAAAAATCATGTACGACGAATTCATACTGGACCAAACGCGACCCCGTACAGAGTCATTCGGAAAACTCTCTGGCGTCGTTTCGTCGGAGAAGGTCTATTATTTTCTATTTCAAGTCGCGTACCTGGTTATCTTCGTCGTCCTGTCGCTCCTCTCCACCGCCGCTGTCGTCTACACCGTCGCGTCAATCTACACCGGCCGCGACGTCACCTTCAAGCCGGTGATGAGCGTCGTCCCCAAGGTCTGGAAGCGGCTCCTCCTGACATTTCTCTGCGTGTTCATCTCCTACGTCGGCTACTCCATCGCCAGCTTGTTCGTCATCATCTCCCTCCTAGTCCTCATCATCTTCATCGGCCACATCACCGCCTCCGGCGTCATACTCCTGATCTACGCCTTCCAGATCCTATACCTCGGCGGCGCGTTCTACCTGATGACGATCTGGCAGCTCTCGAACGTCGTCTCCGTTCTAGAAGATTCCTACGGATTCAAAGCCATGGCCAAGAGCTACGCCTTGGTGAAAGGGAAATTAGGGATTTCCGTGGTTATAATCCTTCTCCTAAGCCTCCCTCTCGGAACGGTGCGTTTTATGTTTGGGCATTTGGTGGTTCGTGCGGCAGCGTTGGGAGTTGTCTCCAAGGGCGTTTTGGGGATTTTGTGCTTCTTGTTGTTTTTCGTGTTCTATTTGTTGAAGCTGGTGACGGAGACGGTGTTGTATTTCGTCTGCAAATCATACCATCATGAAAATATTGACAAATCTGCCCTCTCAGACCATCTCGGAGAGTATTTGTTAGGAGAGTATGTGCCGTTGAAACCTAAGGATGTTCAACTTGAAAAAATTCAAGTTTGA
Coding sequence (CDS)
ATGGATGTAGAACAAGAAGAGATGCAATTCCTCGGAACCTATGGAATTTTTAGAGAAACCAGCAAATTAATCTTCACATGGCGAAGGATTTTCTCCCAAATCACTCTAGCCCTAATTCTCCCTCTCTCCTTCTTGTTCCTCGCTCATATGGAGCTTTCCAATCTATTCCTAAGAAAAATCATGTACGACGAATTCATACTGGACCAAACGCGACCCCGTACAGAGTCATTCGGAAAACTCTCTGGCGTCGTTTCGTCGGAGAAGGTCTATTATTTTCTATTTCAAGTCGCGTACCTGGTTATCTTCGTCGTCCTGTCGCTCCTCTCCACCGCCGCTGTCGTCTACACCGTCGCGTCAATCTACACCGGCCGCGACGTCACCTTCAAGCCGGTGATGAGCGTCGTCCCCAAGGTCTGGAAGCGGCTCCTCCTGACATTTCTCTGCGTGTTCATCTCCTACGTCGGCTACTCCATCGCCAGCTTGTTCGTCATCATCTCCCTCCTAGTCCTCATCATCTTCATCGGCCACATCACCGCCTCCGGCGTCATACTCCTGATCTACGCCTTCCAGATCCTATACCTCGGCGGCGCGTTCTACCTGATGACGATCTGGCAGCTCTCGAACGTCGTCTCCGTTCTAGAAGATTCCTACGGATTCAAAGCCATGGCCAAGAGCTACGCCTTGGTGAAAGGGAAATTAGGGATTTCCGTGGTTATAATCCTTCTCCTAAGCCTCCCTCTCGGAACGGTGCGTTTTATGTTTGGGCATTTGGTGGTTCGTGCGGCAGCGTTGGGAGTTGTCTCCAAGGGCGTTTTGGGGATTTTGTGCTTCTTGTTGTTTTTCGTGTTCTATTTGTTGAAGCTGGTGACGGAGACGGTGTTGTATTTCGTCTGCAAATCATACCATCATGAAAATATTGACAAATCTGCCCTCTCAGACCATCTCGGAGAGTATTTGTTAGGAGAGTATGTGCCGTTGAAACCTAAGGATGTTCAACTTGAAAAAATTCAAGTTTGA
Protein sequence
MDVEQEEMQFLGTYGIFRETSKLIFTWRRIFSQITLALILPLSFLFLAHMELSNLFLRKIMYDEFILDQTRPRTESFGKLSGVVSSEKVYYFLFQVAYLVIFVVLSLLSTAAVVYTVASIYTGRDVTFKPVMSVVPKVWKRLLLTFLCVFISYVGYSIASLFVIISLLVLIIFIGHITASGVILLIYAFQILYLGGAFYLMTIWQLSNVVSVLEDSYGFKAMAKSYALVKGKLGISVVIILLLSLPLGTVRFMFGHLVVRAAALGVVSKGVLGILCFLLFFVFYLLKLVTETVLYFVCKSYHHENIDKSALSDHLGEYLLGEYVPLKPKDVQLEKIQV
Homology
BLAST of CmoCh01G010620 vs. ExPASy TrEMBL
Match:
A0A6J1J254 (uncharacterized protein LOC111480627 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111480627 PE=4 SV=1)
HSP 1 Score: 594.3 bits (1531), Expect = 3.1e-166
Identity = 325/337 (96.44%), Postives = 331/337 (98.22%), Query Frame = 0
Query: 1 MDVEQEEMQFLGTYGIFRETSKLIFTWRRIFSQITLALILPLSFLFLAHMELSNLFLRKI 60
MDVEQEEMQFLGTYGIFRETSKLIFTWRRIFSQITLALILPLSFLFLAHMELSNLFLRKI
Sbjct: 1 MDVEQEEMQFLGTYGIFRETSKLIFTWRRIFSQITLALILPLSFLFLAHMELSNLFLRKI 60
Query: 61 MYDEFILDQTRPRTESFGKLSGVVSSEKVYYFLFQVAYLVIFVVLSLLSTAAVVYTVASI 120
M+DEFILDQTRPRTESFGKLSGVVSSEKVYYFLFQVAYLVIFVVLSLLSTAAVVYTVASI
Sbjct: 61 MHDEFILDQTRPRTESFGKLSGVVSSEKVYYFLFQVAYLVIFVVLSLLSTAAVVYTVASI 120
Query: 121 YTGRDVTFKPVMSVVPKVWKRLLLTFLCVFISYVGYSIASLFVIISLLVLIIFIGHITAS 180
YTGRDVTFKPVMSVVPKVWKRL+LTFLCVFISYVGYSIASLFVIISLL LIIFIGHIT S
Sbjct: 121 YTGRDVTFKPVMSVVPKVWKRLVLTFLCVFISYVGYSIASLFVIISLLFLIIFIGHITGS 180
Query: 181 GVILLIYAFQILYLGGAFYLMTIWQLSNVVSVLEDSYGFKAMAKSYALVKGKLGISVVII 240
GVILL+YAFQILYL GAFYLMTIWQLSNVVSVLEDSYGFKAMAKS+ALVKGKLG+SVVII
Sbjct: 181 GVILLVYAFQILYLAGAFYLMTIWQLSNVVSVLEDSYGFKAMAKSHALVKGKLGLSVVII 240
Query: 241 LLLSLPLGTVRFMFGHLVVRAAALGVVSKGVLGILCFLLFFVFYLLKLVTETVLYFVCKS 300
LLLSLPLGTVRFMFGHLVV AAALGV+SKGVLGILCF LFFVFYLLKLVTETVLY VCKS
Sbjct: 241 LLLSLPLGTVRFMFGHLVVHAAALGVLSKGVLGILCFSLFFVFYLLKLVTETVLYLVCKS 300
Query: 301 YHHENIDKSALSDHLGEYLLGEYVPLKPKDVQLEKIQ 338
YHHENIDKSALSDHLGEYLLGEYVPLKPKDVQLEKIQ
Sbjct: 301 YHHENIDKSALSDHLGEYLLGEYVPLKPKDVQLEKIQ 337
BLAST of CmoCh01G010620 vs. ExPASy TrEMBL
Match:
A0A5D3DMI0 (Putative transmembrane protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold184G00460 PE=4 SV=1)
HSP 1 Score: 514.2 bits (1323), Expect = 4.1e-142
Identity = 278/338 (82.25%), Postives = 301/338 (89.05%), Query Frame = 0
Query: 1 MDVEQEEMQFLGTYGIFRETSKLIFTWRRIFSQITLALILPLSFLFLAHMELSNLFLRKI 60
MDVEQEEMQFLG YGIFRET+KLIFTWRRIFSQITLALILPLSFLFLAHME+S+LFLRKI
Sbjct: 1 MDVEQEEMQFLGVYGIFRETTKLIFTWRRIFSQITLALILPLSFLFLAHMEISDLFLRKI 60
Query: 61 MYDEFILDQTRPRTESFGKLSGVVSSEKVYYFLFQVAYLVIFVVLSLLSTAAVVYTVASI 120
M+DE++LDQT+ T +F KLS VVSSEKVYYFLFQ+ YLVIF+VLSLLST+AVVYTVASI
Sbjct: 61 MFDEYVLDQTQTSTPTFDKLSDVVSSEKVYYFLFQIMYLVIFIVLSLLSTSAVVYTVASI 120
Query: 121 YTGRDVTFKPVMSVVPKVWKRLLLTFLCVFISYVGYSIASLFVIISLLVLIIFIGHITAS 180
YTGRDV FKPVMSVVPKVWKRLLLTFLCVFIS+VGYSIASL VI LL II +
Sbjct: 121 YTGRDVAFKPVMSVVPKVWKRLLLTFLCVFISFVGYSIASLLVITFLLFFIILAFRTAGA 180
Query: 181 GVILLIYAFQILYLGGAFYLMTIWQLSNVVSVLEDSYGFKAMAKSYALVKGKLGISVVII 240
GV L +Y QILYL GAFYL IWQLSNV+SVLEDSYGFKAM KSY LVKGKLGISVVII
Sbjct: 181 GVFLFLYVVQILYLAGAFYLTAIWQLSNVISVLEDSYGFKAMGKSYGLVKGKLGISVVII 240
Query: 241 LLLSLPLGTVRFMFGHLVVRAAALGVVSKGVLGILCFLLFFVFYLLKLVTETVLYFVCKS 300
L LSLPLGT RF+FGHLVVR A+LG++SKG LGI CFLLFF+F+LLKLVTETVLYFVCKS
Sbjct: 241 LCLSLPLGTARFVFGHLVVRTASLGILSKGTLGIFCFLLFFIFFLLKLVTETVLYFVCKS 300
Query: 301 YHHENIDKSALSDHLGEYLLGEYVPLKPKDVQLEKIQV 339
YHHENIDKSALSDHL YLLGEYVPL+P+DVQLEK QV
Sbjct: 301 YHHENIDKSALSDHLEVYLLGEYVPLRPRDVQLEKFQV 338
BLAST of CmoCh01G010620 vs. ExPASy TrEMBL
Match:
A0A1S3CRV6 (uncharacterized protein LOC103504045 OS=Cucumis melo OX=3656 GN=LOC103504045 PE=4 SV=1)
HSP 1 Score: 514.2 bits (1323), Expect = 4.1e-142
Identity = 278/338 (82.25%), Postives = 301/338 (89.05%), Query Frame = 0
Query: 1 MDVEQEEMQFLGTYGIFRETSKLIFTWRRIFSQITLALILPLSFLFLAHMELSNLFLRKI 60
MDVEQEEMQFLG YGIFRET+KLIFTWRRIFSQITLALILPLSFLFLAHME+S+LFLRKI
Sbjct: 1 MDVEQEEMQFLGVYGIFRETTKLIFTWRRIFSQITLALILPLSFLFLAHMEISDLFLRKI 60
Query: 61 MYDEFILDQTRPRTESFGKLSGVVSSEKVYYFLFQVAYLVIFVVLSLLSTAAVVYTVASI 120
M+DE++LDQT+ T +F KLS VVSSEKVYYFLFQ+ YLVIF+VLSLLST+AVVYTVASI
Sbjct: 61 MFDEYVLDQTQTSTPTFDKLSDVVSSEKVYYFLFQIMYLVIFIVLSLLSTSAVVYTVASI 120
Query: 121 YTGRDVTFKPVMSVVPKVWKRLLLTFLCVFISYVGYSIASLFVIISLLVLIIFIGHITAS 180
YTGRDV FKPVMSVVPKVWKRLLLTFLCVFIS+VGYSIASL VI LL II +
Sbjct: 121 YTGRDVAFKPVMSVVPKVWKRLLLTFLCVFISFVGYSIASLLVITFLLFFIILAFRTAGA 180
Query: 181 GVILLIYAFQILYLGGAFYLMTIWQLSNVVSVLEDSYGFKAMAKSYALVKGKLGISVVII 240
GV L +Y QILYL GAFYL IWQLSNV+SVLEDSYGFKAM KSY LVKGKLGISVVII
Sbjct: 181 GVFLFLYVVQILYLAGAFYLTAIWQLSNVISVLEDSYGFKAMGKSYGLVKGKLGISVVII 240
Query: 241 LLLSLPLGTVRFMFGHLVVRAAALGVVSKGVLGILCFLLFFVFYLLKLVTETVLYFVCKS 300
L LSLPLGT RF+FGHLVVR A+LG++SKG LGI CFLLFF+F+LLKLVTETVLYFVCKS
Sbjct: 241 LCLSLPLGTARFVFGHLVVRTASLGILSKGTLGIFCFLLFFIFFLLKLVTETVLYFVCKS 300
Query: 301 YHHENIDKSALSDHLGEYLLGEYVPLKPKDVQLEKIQV 339
YHHENIDKSALSDHL YLLGEYVPL+P+DVQLEK QV
Sbjct: 301 YHHENIDKSALSDHLEVYLLGEYVPLRPRDVQLEKFQV 338
BLAST of CmoCh01G010620 vs. ExPASy TrEMBL
Match:
A0A0A0KDW0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G398200 PE=4 SV=1)
HSP 1 Score: 512.7 bits (1319), Expect = 1.2e-141
Identity = 278/338 (82.25%), Postives = 300/338 (88.76%), Query Frame = 0
Query: 1 MDVEQEEMQFLGTYGIFRETSKLIFTWRRIFSQITLALILPLSFLFLAHMELSNLFLRKI 60
MDVEQEEMQFLG YGIFRET+KLIFTWRRIFSQITLALILPLSFLFLAHME+S+LFLRKI
Sbjct: 1 MDVEQEEMQFLGIYGIFRETTKLIFTWRRIFSQITLALILPLSFLFLAHMEISDLFLRKI 60
Query: 61 MYDEFILDQTRPRTESFGKLSGVVSSEKVYYFLFQVAYLVIFVVLSLLSTAAVVYTVASI 120
M+DEF+LDQT+ T SF KLS VVSSEKVY+FLFQ+ YLVIF+VLSLLST+AVVYTVASI
Sbjct: 61 MFDEFVLDQTQTSTPSFDKLSDVVSSEKVYFFLFQIMYLVIFIVLSLLSTSAVVYTVASI 120
Query: 121 YTGRDVTFKPVMSVVPKVWKRLLLTFLCVFISYVGYSIASLFVIISLLVLIIFIGHITAS 180
YTGRDV FKPVMSVVPKVWKRLLLTFLCVFIS+VGYSIASL VI L II
Sbjct: 121 YTGRDVAFKPVMSVVPKVWKRLLLTFLCVFISFVGYSIASLLVITFLFFFIILAFRTAGG 180
Query: 181 GVILLIYAFQILYLGGAFYLMTIWQLSNVVSVLEDSYGFKAMAKSYALVKGKLGISVVII 240
GV L +Y QILYL GAFYL IWQLSNV+SVLEDSYGFKAM KSY LVKGKLG SVVII
Sbjct: 181 GVFLFLYVVQILYLAGAFYLTAIWQLSNVISVLEDSYGFKAMGKSYGLVKGKLGTSVVII 240
Query: 241 LLLSLPLGTVRFMFGHLVVRAAALGVVSKGVLGILCFLLFFVFYLLKLVTETVLYFVCKS 300
L LSLPLGTVRF+FGHLVVR ++LG++SKG LGILCFLLFF+F+LLKLVTETVLYFVCKS
Sbjct: 241 LCLSLPLGTVRFVFGHLVVRTSSLGILSKGTLGILCFLLFFIFFLLKLVTETVLYFVCKS 300
Query: 301 YHHENIDKSALSDHLGEYLLGEYVPLKPKDVQLEKIQV 339
YHHENIDKSALSDHL YLLGEYVPL+P+DVQLEK QV
Sbjct: 301 YHHENIDKSALSDHLEVYLLGEYVPLRPRDVQLEKFQV 338
BLAST of CmoCh01G010620 vs. ExPASy TrEMBL
Match:
A0A6J1DLG5 (uncharacterized protein LOC111021149 OS=Momordica charantia OX=3673 GN=LOC111021149 PE=4 SV=1)
HSP 1 Score: 455.7 bits (1171), Expect = 1.7e-124
Identity = 249/338 (73.67%), Postives = 285/338 (84.32%), Query Frame = 0
Query: 1 MDVEQEEMQFLGTYGIFRETSKLIFTWRRIFSQITLALILPLSFLFLAHMELSNLFLRKI 60
MDVEQEEMQFLG +GIFRET+KL FTWRRIFSQITLALILPLSFLFLAHME+SNLFLRKI
Sbjct: 1 MDVEQEEMQFLGIFGIFRETTKLTFTWRRIFSQITLALILPLSFLFLAHMEISNLFLRKI 60
Query: 61 MYDEFILDQTRPRTESFGKLSGVVSSEKVYYFLFQVAYLVIFVVLSLLSTAAVVYTVASI 120
+ DE +LDQT+ T F KLS VVSSEK+YY LFQ+AYL++F VLSLLSTAAVVYTVA I
Sbjct: 61 IQDEIVLDQTQISTAKFEKLSDVVSSEKIYYGLFQIAYLIVFAVLSLLSTAAVVYTVACI 120
Query: 121 YTGRDVTFKPVMSVVPKVWKRLLLTFLCVFISYVGYSIASLFVIISLLVLIIFIGHITAS 180
YT RDV FK VMSVVPKVWKRLLLTFLCV IS++ Y+I +LF IS L I+ + +
Sbjct: 121 YTARDVAFKQVMSVVPKVWKRLLLTFLCVSISFLAYTILALFA-ISFLFFIVLLALRGGA 180
Query: 181 GVILLIYAFQILYLGGAFYLMTIWQLSNVVSVLEDSYGFKAMAKSYALVKGKLGISVVII 240
GV+ Y Q+LYL GAF+L IWQLS+VVSVLED GF AMAKSYAL+KG LG++ VII
Sbjct: 181 GVVFTFYVVQLLYLAGAFFLTVIWQLSSVVSVLEDCCGFGAMAKSYALLKGNLGVAAVII 240
Query: 241 LLLSLPLGTVRFMFGHLVVRAAALGVVSKGVLGILCFLLFFVFYLLKLVTETVLYFVCKS 300
L+LSLPL TVRF+FG+LV +LG+++KG+LGI CFLLFF+F+L KLVTETVLYFVCKS
Sbjct: 241 LVLSLPLATVRFVFGNLVAHTTSLGLLTKGILGIFCFLLFFLFFLFKLVTETVLYFVCKS 300
Query: 301 YHHENIDKSALSDHLGEYLLGEYVPLKPKDVQLEKIQV 339
YHHENIDKSALSDHL YLLGEYVPL+P+DVQLEK QV
Sbjct: 301 YHHENIDKSALSDHLEVYLLGEYVPLRPRDVQLEKFQV 337
BLAST of CmoCh01G010620 vs. TAIR 10
Match:
AT4G19950.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G44860.1); Has 338 Blast hits to 330 proteins in 72 species: Archae - 2; Bacteria - 94; Metazoa - 7; Fungi - 0; Plants - 232; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). )
HSP 1 Score: 177.6 bits (449), Expect = 1.7e-44
Identity = 130/339 (38.35%), Postives = 195/339 (57.52%), Query Frame = 0
Query: 1 MDVEQEEMQFLGTYGIFRETSKLIFTWRRIFSQITLALILPLSFLFLAHMELSNLFLRKI 60
MD+ EE+QFL GI RE++ + + F ITL LI PLSF LAH + L +I
Sbjct: 1 MDLAPEELQFLNKRGILRESTSIPQYSLKTFYLITLTLIFPLSFAILAHSLFTQPILAQI 60
Query: 61 MYDEFILDQTRPRTESFGKLSGVVSSEKVYYFLFQVAYLVIFVVLSLLSTAAVVYTVASI 120
T P+ + + E +FQ Y++ SLLSTAAVV+TVAS+
Sbjct: 61 --------DTYPQAD-----QSQLQHEWTVLLVFQFCYIIFLFAFSLLSTAAVVFTVASL 120
Query: 121 YTGRDVTFKPVMSVVPKVWKRLLLTFLCVFISYVGYSIASLFVIISLLVLIIFIGHITAS 180
YTG+ V+F MS +P V KRL +TFL V + + Y+ L +++L+V + + A
Sbjct: 121 YTGKPVSFSSTMSAIPLVLKRLFITFLWVSLLMLAYNTVFLIFLVTLIVAVDLQNVVLAV 180
Query: 181 GVILLIYAFQILYLGGAFYLMTIWQLSNVVSVLEDSYGFKAMAKSYALVKGKLGISVVII 240
+++I+ +L+L Y+ +W L++VVSVLE YG AM KSY L+KGK ++ ++
Sbjct: 181 FSLVVIF---VLFLVVHVYMTALWHLASVVSVLEPIYGLAAMKKSYELLKGKTLMACSMV 240
Query: 241 LLLSLPLGTVRFMFGHLVVRAA-ALGVVSKGVLGILCFLLFFVFYLLKLVTETVLYFVCK 300
+ + G + +FG +VVR G+ ++ V G + + L+ L+ ++V Y+VCK
Sbjct: 241 FIYLVHCGFIAGVFGAVVVRGGDDYGIFARIVAGGFLVGVLVIVNLIGLLVQSVFYYVCK 300
Query: 301 SYHHENIDKSALSDHLGEYLLGEYVPLKPKDVQLEKIQV 339
S+HH+ IDKSAL DHLG Y LGEYVPLK ++Q+E +V
Sbjct: 301 SFHHQEIDKSALHDHLGGY-LGEYVPLK-SNIQMENFEV 321
BLAST of CmoCh01G010620 vs. TAIR 10
Match:
AT5G44860.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G19950.1); Has 233 Blast hits to 227 proteins in 25 species: Archae - 0; Bacteria - 13; Metazoa - 1; Fungi - 0; Plants - 216; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). )
HSP 1 Score: 174.9 bits (442), Expect = 1.1e-43
Identity = 135/342 (39.47%), Postives = 195/342 (57.02%), Query Frame = 0
Query: 1 MDVEQEEMQFLGTYGIFRETSKLIFTWRRIFSQITLALILPLSFLFLAHMELSNLFLRKI 60
MD+ EE+QFL GI RE++ + + F ITL LI PLSF LAH +LF + I
Sbjct: 1 MDLAAEELQFLNIQGILRESTTIPKFSPKTFYLITLTLIFPLSFAILAH----SLFTQPI 60
Query: 61 MYDEFILDQTRPRTESFGKLSGVVSSEKVYYFLFQVAYLVIFVVLSLLSTAAVVYTVASI 120
+ LD T P +S + E ++Q Y++ SLLSTAAVV+TVAS+
Sbjct: 61 LAQ---LDATPPSDQS------KTNHEWTLLLIYQFIYVIFLFAFSLLSTAAVVFTVASL 120
Query: 121 YTGRDVTFKPVMSVVPKVWKRLLLTFLCVFISYVGYSIASLFVIISLLVLIIFIGHITAS 180
YTG+ V+F MS +P V KRL +TFL V + + Y+ S+F LL L++ I I
Sbjct: 121 YTGKPVSFSSTMSAIPLVLKRLFITFLWVSLMMLVYN--SVF----LLFLVVLIVAIDLQ 180
Query: 181 GVILLIYAFQ---ILYLGGAFYLMTIWQLSNVVSVLEDSYGFKAMAKSYALVKGKLGISV 240
VIL +++ +L+LG Y+ W L++VVSVLE YG AM KSY L+ G+ ++
Sbjct: 181 SVILAVFSMVVIFVLFLGVHVYMTAWWHLASVVSVLEPIYGIAAMKKSYELLNGRTNMAC 240
Query: 241 VIILLLSLPLGTVRFMFGHLVVRAA-ALGVVSKGVLGILCFLLFFVFYLLKLVTETVLYF 300
++ + G +FG +VV G+ +K V+G + + L+ L+ ++V Y+
Sbjct: 241 SMVFMYLALCGITAGVFGGVVVHGGDDFGLFTKIVVGGFLVGILVIVNLVGLLVQSVFYY 300
Query: 301 VCKSYHHENIDKSALSDHLGEYLLGEYVPLKPKDVQLEKIQV 339
VCKS+HH+ IDKSAL DHLG Y LG+YVPLK +Q+E +
Sbjct: 301 VCKSFHHQPIDKSALHDHLGGY-LGDYVPLK-SSIQMENFDI 321
BLAST of CmoCh01G010620 vs. TAIR 10
Match:
AT1G31130.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G19950.1); Has 246 Blast hits to 244 proteins in 29 species: Archae - 2; Bacteria - 16; Metazoa - 0; Fungi - 0; Plants - 222; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). )
HSP 1 Score: 171.4 bits (433), Expect = 1.2e-42
Identity = 129/341 (37.83%), Postives = 194/341 (56.89%), Query Frame = 0
Query: 1 MDVEQEEMQFLGTYGIFRETSKLIFTWRRIFSQITLALILPLSFLFLAHMELSNLFLRKI 60
MD++ EE+QFL + +E+ + R F ITL+ I PLSF LAH +LF + I
Sbjct: 1 MDLQPEELQFLTIPQLLQESISIKKRSPRTFYLITLSFIFPLSFAILAH----SLFTQPI 60
Query: 61 MYDEFILDQTRPRTESFGKLSGVVSSEKVYYFLFQVAYLVIFVVLSLLSTAAVVYTVASI 120
+ LD++ P + V +FQ +YL+ SLLSTAAVV+TVAS+
Sbjct: 61 LAK---LDKSDPPNSDRSRHDWTV------LLIFQFSYLIFLFAFSLLSTAAVVFTVASL 120
Query: 121 YTGRDVTFKPVMSVVPKVWKRLLLTFLCVFISYVGYSIASLFVIISLLVLIIF--IGHIT 180
YTG+ V+F +S +PKV+KRL +TFL V + Y+ ++ LLV + +G
Sbjct: 121 YTGKPVSFSSTLSAIPKVFKRLFITFLWVALLMFAYNAVFFVFLVMLLVALDLNSLGLAI 180
Query: 181 ASGVILLIYAFQILYLGGAFYLMTIWQLSNVVSVLEDSYGFKAMAKSYALVKGKLGISVV 240
+GVI+ +LY G Y +W L +V+SVLE YG AM K+Y L+KGK +++
Sbjct: 181 VAGVII-----SVLYFGVHVYFTALWHLGSVISVLEPVYGIAAMRKAYELLKGKTKMAMG 240
Query: 241 IILLLSLPLGTVRFMFGHLVVRAAA-LGVVSKGVLGILCFLLFFVFYLLKLVTETVLYFV 300
+I + G + +FG +VV G ++ ++G L + + L+ L+ ++V Y+V
Sbjct: 241 LIFVYLFLCGLIGVVFGAVVVHGGGKYGTFTRTLVGGLLVGVLVMVNLVGLLVQSVFYYV 300
Query: 301 CKSYHHENIDKSALSDHLGEYLLGEYVPLKPKDVQLEKIQV 339
CKSYHH+ IDK+AL D LG Y LG+YVPLK ++QLE + +
Sbjct: 301 CKSYHHQTIDKTALYDQLGGY-LGDYVPLK-SNIQLEDLDI 321
BLAST of CmoCh01G010620 vs. TAIR 10
Match:
AT1G69430.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G26650.1); Has 216 Blast hits to 215 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 216; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )
HSP 1 Score: 51.6 bits (122), Expect = 1.4e-06
Identity = 78/303 (25.74%), Postives = 139/303 (45.87%), Query Frame = 0
Query: 16 IFRETSKLIFTWRRIFSQITLALILPLSFLFLAHMELSNLFLRKIMYDEFILDQTRPRTE 75
I RET +++ F I L LI P+S + L + ++ D+ +++ R
Sbjct: 46 ILRETVRILRYNLGAFMLIALLLICPVSAILLPN----------LLVDQSVVNSLTVRLL 105
Query: 76 SFGKLSGVV-------SSEKVYYFLFQVAY-LVIFVVLSLLSTAAVVYTVASIYTGRDVT 135
K SG+ S +K A +F+ LSLLS AAVVY+V Y+ + V
Sbjct: 106 LVSKSSGLPLLPFVRNSCQKFSETAVSSAMCFPLFITLSLLSRAAVVYSVDCTYSRKKVV 165
Query: 136 FKPVMSVVPKVWKRLLLTFL---CVFISYVGYSIASLFVIISLLVLIIFIGHITASGVIL 195
+ ++ ++WKRL++T+L V + + L + S ++ F A G IL
Sbjct: 166 VTKFVVIMQRLWKRLVITYLWICTVIVVCLTSFCVFLVAVCSSFYVLGFSPDFNAYGAIL 225
Query: 196 LIYAFQILYLGGAFYLMTIWQLSNVVSVLEDSYGFKAMAKSYALVKGKLGISVVIILLLS 255
+ F +++ + I + V+S+LED G A+ ++ L+KG+ + ++I L +
Sbjct: 226 VGLVFSVVFANA----IIICNTTIVISILEDVSGPGALVRASDLIKGQTQVGLLIFLGST 285
Query: 256 LPLGTVRFMFGHLVVRAAALGVVSKGVLGILCFLLFFVFYLLKLVTETVLYFVCKSYHHE 308
+ L V +F H V + S+ G L +++ L+ + V YF C+SY E
Sbjct: 286 IGLTFVEGLFEHRVKSLSYGDGSSRLWEGPLLVVMYSFVVLIDTMMSAVFYFSCRSYSME 334
BLAST of CmoCh01G010620 vs. TAIR 10
Match:
AT1G26650.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G69430.1); Has 205 Blast hits to 204 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 205; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )
HSP 1 Score: 50.4 bits (119), Expect = 3.2e-06
Identity = 73/291 (25.09%), Postives = 135/291 (46.39%), Query Frame = 0
Query: 16 IFRETSKLIFTWRRIFSQITLALILPLSFLFLAHMELSNLFLRKIMYDEFILDQTRP-RT 75
I RET +++ T LI P+S L L + + + K+ ++ ++
Sbjct: 30 ILRETVRILRYNLGALMLTTAVLICPVSALLLPNFLVDQSLVNKLTVKLLLVAKSSGLPL 89
Query: 76 ESFGKLSGVVSSEKVYYFLFQVAYLVIFVVLSLLSTAAVVYTVASIYTGRDVTFKPVMSV 135
+ F K S +E + +F+ +SLLS AAVVY+V Y+ V + +
Sbjct: 90 QPFVKHSCQKFAETA---VSSAMCFPVFITVSLLSKAAVVYSVDCSYSREVVDISKFLVI 149
Query: 136 VPKVWKRLLLTFLCVFISYVG---YSIASLFVIISLLVLIIFIGHITASGVILLIYAFQI 195
+ K+W+R++ T++ + I VG + L I S ++ F G +L+ AF +
Sbjct: 150 LQKIWRRVVFTYVWICILIVGCFTFFCVLLVAICSSFSVLGFSPDFNVYGAMLVGLAFSV 209
Query: 196 LYLGGAFYLMTIWQLSNVVSVLEDSYGFKAMAKSYALVKGKLGISVVIILLLSLPLGTVR 255
++ + I + V+SVLED G A+ ++ L+KG++ + +++ L +L L V
Sbjct: 210 VFANA----IIICNTAIVISVLEDVSGLGALMRASDLIKGQIQVGLLMFLGSTLGLAFVE 269
Query: 256 FMFGHLVVRAAALGVVSKGVLGILCFLLFFVFYLLKLVTETVLYFVCKSYH 303
+F H V + + S+ G L L++ L+ + V YF C+ Y+
Sbjct: 270 GLFDHRVKKVSYGDGSSRLWEGPLLVLMYSFVTLIDSMMSAVFYFSCRVYY 313
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1J254 | 3.1e-166 | 96.44 | uncharacterized protein LOC111480627 isoform X1 OS=Cucurbita maxima OX=3661 GN=L... | [more] |
A0A5D3DMI0 | 4.1e-142 | 82.25 | Putative transmembrane protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s... | [more] |
A0A1S3CRV6 | 4.1e-142 | 82.25 | uncharacterized protein LOC103504045 OS=Cucumis melo OX=3656 GN=LOC103504045 PE=... | [more] |
A0A0A0KDW0 | 1.2e-141 | 82.25 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G398200 PE=4 SV=1 | [more] |
A0A6J1DLG5 | 1.7e-124 | 73.67 | uncharacterized protein LOC111021149 OS=Momordica charantia OX=3673 GN=LOC111021... | [more] |
Match Name | E-value | Identity | Description | |
AT4G19950.1 | 1.7e-44 | 38.35 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... | [more] |
AT5G44860.1 | 1.1e-43 | 39.47 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... | [more] |
AT1G31130.1 | 1.2e-42 | 37.83 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... | [more] |
AT1G69430.1 | 1.4e-06 | 25.74 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... | [more] |
AT1G26650.1 | 3.2e-06 | 25.09 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... | [more] |