CmoCh01G010430 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh01G010430
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Uracil-DNA glycosylase
Location	Cmo_Chr01: 8230731 .. 8231708 (-)
RNA-Seq Expression	CmoCh01G010430
Synteny	CmoCh01G010430

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GGAGAGTGGAAAGGTTTTAGCGGATTCTCTGTTGGTTCCCGCCATTAAAGCCTGCTCCACCTCCACTCTACTGGAGCAACCAGACCCAAAATGGCTTCCTCCTCGGCTTCACTTAAATCCAAAACCAGAACCCTAATCGACATCTTCCAGCCAGCGCTTTCCAAACGCATAAAAACCTCACAGACGCTGAAAACCCTTGCTACCACGGACGAGAAAGGCGATTCAGAGCTCACATTGGCTTCCTCTTCGATGGACATCTCTTCCTCTCAGAAATCCCGCATGGAAACCAACAAATGGTTGGCCAGATCGAAGCGCAATCTCAAAATTTCCTCTGATAGGGTTTCCAAATGGGAGAATGGATGTGTGAAGTTGGAGGAGCTTTTGGTGGATGAGACATGGTTCGAAGCCCTTCCCGGAGAGTTTGATAAGCCCTATGCTCTTAACCTCTGCAAGTTCGTAGAGACGGAGATTTGCAGCAGCGGTGTCCCTATTTATCCTCCTCCCTCTTTGATCTTTAATGCTCTGAATTCTACCCCTTTCGATAGGGTGAAAGTTGTTATTCTCGGTCAAGATCCTTATCATGGGCCTGGTCAAGCTATGGGTCTTTCTTTTTCTGTTCCTGAAGGAGTTAAAATCCCATCAAGTCTTCTCAACATATTCAAGGAACTGAGGGAAGATCTTGGTTGTTCCATCCCATCCCATGGAAATCTCGAGAAATGGGCTGTTCAGGTGCTGTTGGCACTCATCTCTTTATTCTAAATACTTAGAAATGCATACTTAGATGTAGCTACTTCTAATATATTGGGGCTACAGAAATGGTACCCACCATTGTCTTCATATGTTTGCCTTTATGCTTTTGGTCTTTACTTCGTTTGCTTAGAATAGTCTTAAAATTTGCGTTGAAGAGATTTTCATCATGGAAAATAGGGCACAGTTCTGACTACACTTAATCTTTATTTGCAGGTTCTAGTTGTTTGA

mRNA sequence

GGAGAGTGGAAAGGTTTTAGCGGATTCTCTGTTGGTTCCCGCCATTAAAGCCTGCTCCACCTCCACTCTACTGGAGCAACCAGACCCAAAATGGCTTCCTCCTCGGCTTCACTTAAATCCAAAACCAGAACCCTAATCGACATCTTCCAGCCAGCGCTTTCCAAACGCATAAAAACCTCACAGACGCTGAAAACCCTTGCTACCACGGACGAGAAAGGCGATTCAGAGCTCACATTGGCTTCCTCTTCGATGGACATCTCTTCCTCTCAGAAATCCCGCATGGAAACCAACAAATGGTTGGCCAGATCGAAGCGCAATCTCAAAATTTCCTCTGATAGGGTTTCCAAATGGGAGAATGGATGTGTGAAGTTGGAGGAGCTTTTGGTGGATGAGACATGGTTCGAAGCCCTTCCCGGAGAGTTTGATAAGCCCTATGCTCTTAACCTCTGCAAGTTCGTAGAGACGGAGATTTGCAGCAGCGGTGTCCCTATTTATCCTCCTCCCTCTTTGATCTTTAATGCTCTGAATTCTACCCCTTTCGATAGGGTGAAAGTTGTTATTCTCGGTCAAGATCCTTATCATGGGCCTGGTCAAGCTATGGGTCTTTCTTTTTCTGTTCCTGAAGGAGTTAAAATCCCATCAAGTCTTCTCAACATATTCAAGGAACTGAGGGAAGATCTTGGTTGTTCCATCCCATCCCATGGAAATCTCGAGAAATGGGCTGTTCAGGTTCTAGTTGTTTGA

Coding sequence (CDS)

ATGGCTTCCTCCTCGGCTTCACTTAAATCCAAAACCAGAACCCTAATCGACATCTTCCAGCCAGCGCTTTCCAAACGCATAAAAACCTCACAGACGCTGAAAACCCTTGCTACCACGGACGAGAAAGGCGATTCAGAGCTCACATTGGCTTCCTCTTCGATGGACATCTCTTCCTCTCAGAAATCCCGCATGGAAACCAACAAATGGTTGGCCAGATCGAAGCGCAATCTCAAAATTTCCTCTGATAGGGTTTCCAAATGGGAGAATGGATGTGTGAAGTTGGAGGAGCTTTTGGTGGATGAGACATGGTTCGAAGCCCTTCCCGGAGAGTTTGATAAGCCCTATGCTCTTAACCTCTGCAAGTTCGTAGAGACGGAGATTTGCAGCAGCGGTGTCCCTATTTATCCTCCTCCCTCTTTGATCTTTAATGCTCTGAATTCTACCCCTTTCGATAGGGTGAAAGTTGTTATTCTCGGTCAAGATCCTTATCATGGGCCTGGTCAAGCTATGGGTCTTTCTTTTTCTGTTCCTGAAGGAGTTAAAATCCCATCAAGTCTTCTCAACATATTCAAGGAACTGAGGGAAGATCTTGGTTGTTCCATCCCATCCCATGGAAATCTCGAGAAATGGGCTGTTCAGGTTCTAGTTGTTTGA

Protein sequence

MASSSASLKSKTRTLIDIFQPALSKRIKTSQTLKTLATTDEKGDSELTLASSSMDISSSQKSRMETNKWLARSKRNLKISSDRVSKWENGCVKLEELLVDETWFEALPGEFDKPYALNLCKFVETEICSSGVPIYPPPSLIFNALNSTPFDRVKVVILGQDPYHGPGQAMGLSFSVPEGVKIPSSLLNIFKELREDLGCSIPSHGNLEKWAVQVLVV

Homology

[Close]

BLAST of CmoCh01G010430 vs. ExPASy Swiss-Prot
Match: Q9LIH6 (Uracil-DNA glycosylase, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=UNG PE=1 SV=1)

HSP 1 Score: 224.6 bits (571), Expect = 1.1e-57
Identity = 125/224 (55.80%), Postives = 152/224 (67.86%), Query Frame = 0


Query: 10  SKTRTLIDIFQPALSKRIKTSQTLKTLATTDEKGDSE---------------LTLASSSM 69
           S  +TL+D FQPA  KR+K S +  +       G S                 ++A  S 
Sbjct: 4   STPKTLMDFFQPA--KRLKASPSSSSFPAVSVAGGSRDLGSVANSPPRVTVTTSVADDSS 63

Query: 70  DISSSQKSRMETNKWLARSKRNLKISSDRV--SKWENGC-VKLEELLVDETWFEALPGEF 129
            ++  Q +R E NK++A+SKRNL + S+RV  +K E  C V L ELLV+E+W +ALPGEF
Sbjct: 64  GLTPEQIARAEFNKFVAKSKRNLAVCSERVTKAKSEGNCYVPLSELLVEESWLKALPGEF 123

Query: 130 DKPYALNLCKFVETEIC--SSGVPIYPPPSLIFNALNSTPFDRVKVVILGQDPYHGPGQA 189
            KPYA +L  F+E EI   S    IYPP  LIFNALN+TPFDRVK VI+GQDPYHGPGQA
Sbjct: 124 HKPYAKSLSDFLEREIITDSKSPLIYPPQHLIFNALNTTPFDRVKTVIIGQDPYHGPGQA 183

Query: 190 MGLSFSVPEGVKIPSSLLNIFKELREDLGCSIPSHGNLEKWAVQ 214
           MGLSFSVPEG K+PSSLLNIFKEL +D+GCSIP HGNL+KWAVQ
Sbjct: 184 MGLSFSVPEGEKLPSSLLNIFKELHKDVGCSIPRHGNLQKWAVQ 225

[Close]

BLAST of CmoCh01G010430 vs. ExPASy Swiss-Prot
Match: C1DQR0 (Uracil-DNA glycosylase OS=Azotobacter vinelandii (strain DJ / ATCC BAA-1303) OX=322710 GN=ung PE=3 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 6.0e-35
Identity = 70/119 (58.82%), Postives = 87/119 (73.11%), Query Frame = 0


Query: 95  EELLVDETWFEALPGEFDKPYALNLCKFVETEICSSGVPIYPPPSLIFNALNSTPFDRVK 154
           + + ++ +W EAL  EF+KPY   L  F+  E  ++G  IYPP SLIFNAL+STP D+VK
Sbjct: 6   DRVRLEASWKEALHDEFEKPYMQELSDFLRRE-KAAGKEIYPPGSLIFNALDSTPLDQVK 65

Query: 155 VVILGQDPYHGPGQAMGLSFSVPEGVKIPSSLLNIFKELREDLGCSIPSHGNLEKWAVQ 214
           VVI+GQDPYHGPGQA GL FSV  GV +P SL NIFKEL+ DL   IP HG+L++WA Q
Sbjct: 66  VVIIGQDPYHGPGQAHGLCFSVQPGVPVPPSLQNIFKELKRDLNIDIPKHGHLQRWAEQ 123

[Close]

BLAST of CmoCh01G010430 vs. ExPASy Swiss-Prot
Match: Q88N05 (Uracil-DNA glycosylase OS=Pseudomonas putida (strain ATCC 47054 / DSM 6125 / NCIMB 11950 / KT2440) OX=160488 GN=ung PE=3 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 1.3e-34
Identity = 71/119 (59.66%), Postives = 86/119 (72.27%), Query Frame = 0


Query: 95  EELLVDETWFEALPGEFDKPYALNLCKFVETEICSSGVPIYPPPSLIFNALNSTPFDRVK 154
           + + ++ +W  AL GEFD+PY   L +F+  E  ++G  IYPP  LIFNALNSTP D+VK
Sbjct: 5   DRIKLEPSWKAALRGEFDQPYMHQLREFLRGEY-AAGKEIYPPGPLIFNALNSTPLDQVK 64

Query: 155 VVILGQDPYHGPGQAMGLSFSVPEGVKIPSSLLNIFKELREDLGCSIPSHGNLEKWAVQ 214
           VVILGQDPYHGPGQA GL FSV  GV  P SL+NI+KEL+ DL   IPSHG L+ WA Q
Sbjct: 65  VVILGQDPYHGPGQAHGLCFSVQPGVATPPSLVNIYKELQRDLNIPIPSHGYLQSWAEQ 122

[Close]

BLAST of CmoCh01G010430 vs. ExPASy Swiss-Prot
Match: Q4KGS0 (Uracil-DNA glycosylase OS=Pseudomonas fluorescens (strain ATCC BAA-477 / NRRL B-23932 / Pf-5) OX=220664 GN=ung PE=3 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 2.3e-34
Identity = 69/119 (57.98%), Postives = 86/119 (72.27%), Query Frame = 0


Query: 95  EELLVDETWFEALPGEFDKPYALNLCKFVETEICSSGVPIYPPPSLIFNALNSTPFDRVK 154
           + + ++ +W EAL  EFD+PY   L +F+  E  ++G  IYPP  +IFNALNSTP D+VK
Sbjct: 5   DRIKLEPSWKEALRAEFDQPYMSELREFLRQE-HAAGKEIYPPGPMIFNALNSTPLDKVK 64

Query: 155 VVILGQDPYHGPGQAMGLSFSVPEGVKIPSSLLNIFKELREDLGCSIPSHGNLEKWAVQ 214
           VVILGQDPYHGPGQA GL FSV  GV  P SL+NI+KEL+ DL   IP+HG L+ WA Q
Sbjct: 65  VVILGQDPYHGPGQAHGLCFSVQPGVPAPPSLVNIYKELKRDLNIDIPNHGYLQSWAEQ 122

[Close]

BLAST of CmoCh01G010430 vs. ExPASy Swiss-Prot
Match: Q3KGL4 (Uracil-DNA glycosylase OS=Pseudomonas fluorescens (strain Pf0-1) OX=205922 GN=ung PE=3 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 2.3e-34
Identity = 69/119 (57.98%), Postives = 86/119 (72.27%), Query Frame = 0


Query: 95  EELLVDETWFEALPGEFDKPYALNLCKFVETEICSSGVPIYPPPSLIFNALNSTPFDRVK 154
           + + ++ +W EAL  EFD+PY   L  F++ E  ++G  IYPP  +IFNALNSTP D+VK
Sbjct: 5   DRIKLEPSWKEALRAEFDQPYMTELRTFLQQE-RAAGKEIYPPGPMIFNALNSTPLDKVK 64

Query: 155 VVILGQDPYHGPGQAMGLSFSVPEGVKIPSSLLNIFKELREDLGCSIPSHGNLEKWAVQ 214
           VVILGQDPYHGPGQA GL FSV  GV  P SL+NI+KEL+ DL   IP+HG L+ WA Q
Sbjct: 65  VVILGQDPYHGPGQAHGLCFSVQPGVPAPPSLVNIYKELKRDLNIDIPNHGYLQSWADQ 122

[Close]

BLAST of CmoCh01G010430 vs. ExPASy TrEMBL
Match: A0A6J1EEH8 (Uracil-DNA glycosylase OS=Cucurbita moschata OX=3662 GN=LOC111433476 PE=3 SV=1)

HSP 1 Score: 422.2 bits (1084), Expect = 1.3e-114
Identity = 213/213 (100.00%), Postives = 213/213 (100.00%), Query Frame = 0


Query: 1   MASSSASLKSKTRTLIDIFQPALSKRIKTSQTLKTLATTDEKGDSELTLASSSMDISSSQ 60
           MASSSASLKSKTRTLIDIFQPALSKRIKTSQTLKTLATTDEKGDSELTLASSSMDISSSQ
Sbjct: 1   MASSSASLKSKTRTLIDIFQPALSKRIKTSQTLKTLATTDEKGDSELTLASSSMDISSSQ 60

Query: 61  KSRMETNKWLARSKRNLKISSDRVSKWENGCVKLEELLVDETWFEALPGEFDKPYALNLC 120
           KSRMETNKWLARSKRNLKISSDRVSKWENGCVKLEELLVDETWFEALPGEFDKPYALNLC
Sbjct: 61  KSRMETNKWLARSKRNLKISSDRVSKWENGCVKLEELLVDETWFEALPGEFDKPYALNLC 120

Query: 121 KFVETEICSSGVPIYPPPSLIFNALNSTPFDRVKVVILGQDPYHGPGQAMGLSFSVPEGV 180
           KFVETEICSSGVPIYPPPSLIFNALNSTPFDRVKVVILGQDPYHGPGQAMGLSFSVPEGV
Sbjct: 121 KFVETEICSSGVPIYPPPSLIFNALNSTPFDRVKVVILGQDPYHGPGQAMGLSFSVPEGV 180

Query: 181 KIPSSLLNIFKELREDLGCSIPSHGNLEKWAVQ 214
           KIPSSLLNIFKELREDLGCSIPSHGNLEKWAVQ
Sbjct: 181 KIPSSLLNIFKELREDLGCSIPSHGNLEKWAVQ 213

[Close]

BLAST of CmoCh01G010430 vs. ExPASy TrEMBL
Match: A0A6J1J2E4 (Uracil-DNA glycosylase OS=Cucurbita maxima OX=3661 GN=LOC111480636 PE=3 SV=1)

HSP 1 Score: 410.2 bits (1053), Expect = 5.3e-111
Identity = 207/213 (97.18%), Postives = 209/213 (98.12%), Query Frame = 0


Query: 1   MASSSASLKSKTRTLIDIFQPALSKRIKTSQTLKTLATTDEKGDSELTLASSSMDISSSQ 60
           MASSSASLKSKTRTLIDIFQPALSKR+KTSQTLKTLATTDEK DSELTLASSSMDISSSQ
Sbjct: 1   MASSSASLKSKTRTLIDIFQPALSKRLKTSQTLKTLATTDEKCDSELTLASSSMDISSSQ 60

Query: 61  KSRMETNKWLARSKRNLKISSDRVSKWENGCVKLEELLVDETWFEALPGEFDKPYALNLC 120
           KSRMETNKWLARS RNLKISSDRVSKWENGCVKLEELLVDETWFEALPGEF KPYALNLC
Sbjct: 61  KSRMETNKWLARSNRNLKISSDRVSKWENGCVKLEELLVDETWFEALPGEFQKPYALNLC 120

Query: 121 KFVETEICSSGVPIYPPPSLIFNALNSTPFDRVKVVILGQDPYHGPGQAMGLSFSVPEGV 180
           KFVETEICSSGVPIYPPP LIFNALNSTPFDRVKVVILGQDPYHGPGQAMGLSFSVPEGV
Sbjct: 121 KFVETEICSSGVPIYPPPCLIFNALNSTPFDRVKVVILGQDPYHGPGQAMGLSFSVPEGV 180

Query: 181 KIPSSLLNIFKELREDLGCSIPSHGNLEKWAVQ 214
           KIPSSLLNIFKELREDLGCSIPSHGNL+KWAVQ
Sbjct: 181 KIPSSLLNIFKELREDLGCSIPSHGNLKKWAVQ 213

[Close]

BLAST of CmoCh01G010430 vs. ExPASy TrEMBL
Match: A0A5A7VER9 (Uracil-DNA glycosylase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold90G001710 PE=3 SV=1)

HSP 1 Score: 392.5 bits (1007), Expect = 1.1e-105
Identity = 195/214 (91.12%), Postives = 207/214 (96.73%), Query Frame = 0


Query: 1   MASSSASLKSKTRTLIDIFQPALSKRIKTSQTLKTLATTDEKGDSELTLASSSMDISSSQ 60
           MASSSASL SKTRTLIDIFQPALSKR+KTSQTLKTLAT D+K DS+LTLASSS D+S+SQ
Sbjct: 1   MASSSASLSSKTRTLIDIFQPALSKRLKTSQTLKTLATNDDKCDSDLTLASSSTDMSASQ 60

Query: 61  KSRMETNKWLARSKRNLKISSDRVSKWENGCVKLEELLVDETWFEALPGEFDKPYALNLC 120
            SRMETNKW+ARSKRNLKI SDRVSKWENGC+KLEELLV+ETWFEALPGEF+KPYALNLC
Sbjct: 61  ISRMETNKWMARSKRNLKICSDRVSKWENGCMKLEELLVEETWFEALPGEFEKPYALNLC 120

Query: 121 KFVETEICSSGVPIYPPPSLIFNALNSTPFDRVKVVILGQDPYHGPGQAMGLSFSVPEGV 180
           KFV+TEICSSGVPIYPPPSLIFNALNSTPFDRVKVVILGQDPYHGPGQAMGLSFSVPEGV
Sbjct: 121 KFVQTEICSSGVPIYPPPSLIFNALNSTPFDRVKVVILGQDPYHGPGQAMGLSFSVPEGV 180

Query: 181 KIPSSLLNIFKELREDLGCSIPSHGNLEKWAVQV 215
           KIPSSLLNIFKEL++DLGCSIPSHGNL KWAVQV
Sbjct: 181 KIPSSLLNIFKELKDDLGCSIPSHGNLGKWAVQV 214

[Close]

BLAST of CmoCh01G010430 vs. ExPASy TrEMBL
Match: A0A5D3CRN3 (Uracil-DNA glycosylase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold186G001130 PE=3 SV=1)

HSP 1 Score: 392.5 bits (1007), Expect = 1.1e-105
Identity = 195/214 (91.12%), Postives = 207/214 (96.73%), Query Frame = 0


Query: 1   MASSSASLKSKTRTLIDIFQPALSKRIKTSQTLKTLATTDEKGDSELTLASSSMDISSSQ 60
           MASSSASL SKTRTLIDIFQPALSKR+KTSQTLKTLAT D+K DS+LTLASSS D+S+SQ
Sbjct: 1   MASSSASLSSKTRTLIDIFQPALSKRLKTSQTLKTLATNDDKCDSDLTLASSSTDMSASQ 60

Query: 61  KSRMETNKWLARSKRNLKISSDRVSKWENGCVKLEELLVDETWFEALPGEFDKPYALNLC 120
            SRMETNKW+ARSKRNLKI SDRVSKWENGC+KLEELLV+ETWFEALPGEF+KPYALNLC
Sbjct: 61  ISRMETNKWMARSKRNLKICSDRVSKWENGCMKLEELLVEETWFEALPGEFEKPYALNLC 120

Query: 121 KFVETEICSSGVPIYPPPSLIFNALNSTPFDRVKVVILGQDPYHGPGQAMGLSFSVPEGV 180
           KFV+TEICSSGVPIYPPPSLIFNALNSTPFDRVKVVILGQDPYHGPGQAMGLSFSVPEGV
Sbjct: 121 KFVQTEICSSGVPIYPPPSLIFNALNSTPFDRVKVVILGQDPYHGPGQAMGLSFSVPEGV 180

Query: 181 KIPSSLLNIFKELREDLGCSIPSHGNLEKWAVQV 215
           KIPSSLLNIFKEL++DLGCSIPSHGNL KWAVQV
Sbjct: 181 KIPSSLLNIFKELKDDLGCSIPSHGNLGKWAVQV 214

[Close]

BLAST of CmoCh01G010430 vs. ExPASy TrEMBL
Match: A0A0A0KMG3 (Uracil-DNA glycosylase OS=Cucumis sativus OX=3659 GN=Csa_5G289610 PE=3 SV=1)

HSP 1 Score: 391.7 bits (1005), Expect = 1.9e-105
Identity = 196/213 (92.02%), Postives = 204/213 (95.77%), Query Frame = 0


Query: 1   MASSSASLKSKTRTLIDIFQPALSKRIKTSQTLKTLATTDEKGDSELTLASSSMDISSSQ 60
           MASSSASL SKTRTLIDIFQPALSKR+KTSQTLKTLAT D+K DS+LTLASSS DIS+SQ
Sbjct: 1   MASSSASLSSKTRTLIDIFQPALSKRLKTSQTLKTLATNDDKCDSDLTLASSSADISASQ 60

Query: 61  KSRMETNKWLARSKRNLKISSDRVSKWENGCVKLEELLVDETWFEALPGEFDKPYALNLC 120
            SRMETNKW+ARSKRNLK  SDRVSKWENGCVKLEELLV+ETWFEALPGEF KPYALNLC
Sbjct: 61  ISRMETNKWIARSKRNLKTCSDRVSKWENGCVKLEELLVEETWFEALPGEFQKPYALNLC 120

Query: 121 KFVETEICSSGVPIYPPPSLIFNALNSTPFDRVKVVILGQDPYHGPGQAMGLSFSVPEGV 180
           KFV+TEICSSGVPIYPPPSLIFNALNSTPFDRVKVVILGQDPYHGPGQAMGLSFSVPEGV
Sbjct: 121 KFVQTEICSSGVPIYPPPSLIFNALNSTPFDRVKVVILGQDPYHGPGQAMGLSFSVPEGV 180

Query: 181 KIPSSLLNIFKELREDLGCSIPSHGNLEKWAVQ 214
           KIPSSLLNIFKELR+DLGCSIPSHGNL KWAVQ
Sbjct: 181 KIPSSLLNIFKELRDDLGCSIPSHGNLGKWAVQ 213

[Close]

BLAST of CmoCh01G010430 vs. TAIR 10
Match: AT3G18630.1 (uracil dna glycosylase )

HSP 1 Score: 224.6 bits (571), Expect = 7.9e-59
Identity = 125/224 (55.80%), Postives = 152/224 (67.86%), Query Frame = 0


Query: 10  SKTRTLIDIFQPALSKRIKTSQTLKTLATTDEKGDSE---------------LTLASSSM 69
           S  +TL+D FQPA  KR+K S +  +       G S                 ++A  S 
Sbjct: 4   STPKTLMDFFQPA--KRLKASPSSSSFPAVSVAGGSRDLGSVANSPPRVTVTTSVADDSS 63

Query: 70  DISSSQKSRMETNKWLARSKRNLKISSDRV--SKWENGC-VKLEELLVDETWFEALPGEF 129
            ++  Q +R E NK++A+SKRNL + S+RV  +K E  C V L ELLV+E+W +ALPGEF
Sbjct: 64  GLTPEQIARAEFNKFVAKSKRNLAVCSERVTKAKSEGNCYVPLSELLVEESWLKALPGEF 123

Query: 130 DKPYALNLCKFVETEIC--SSGVPIYPPPSLIFNALNSTPFDRVKVVILGQDPYHGPGQA 189
            KPYA +L  F+E EI   S    IYPP  LIFNALN+TPFDRVK VI+GQDPYHGPGQA
Sbjct: 124 HKPYAKSLSDFLEREIITDSKSPLIYPPQHLIFNALNTTPFDRVKTVIIGQDPYHGPGQA 183

Query: 190 MGLSFSVPEGVKIPSSLLNIFKELREDLGCSIPSHGNLEKWAVQ 214
           MGLSFSVPEG K+PSSLLNIFKEL +D+GCSIP HGNL+KWAVQ
Sbjct: 184 MGLSFSVPEGEKLPSSLLNIFKELHKDVGCSIPRHGNLQKWAVQ 225

The following BLAST results are available for this feature:

BLAST of CmoCh01G010430 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LIH6	1.1e-57	55.80	Uracil-DNA glycosylase, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=UNG PE=...	[more]
C1DQR0	6.0e-35	58.82	Uracil-DNA glycosylase OS=Azotobacter vinelandii (strain DJ / ATCC BAA-1303) OX=...	[more]
Q88N05	1.3e-34	59.66	Uracil-DNA glycosylase OS=Pseudomonas putida (strain ATCC 47054 / DSM 6125 / NCI...	[more]
Q4KGS0	2.3e-34	57.98	Uracil-DNA glycosylase OS=Pseudomonas fluorescens (strain ATCC BAA-477 / NRRL B-...	[more]
Q3KGL4	2.3e-34	57.98	Uracil-DNA glycosylase OS=Pseudomonas fluorescens (strain Pf0-1) OX=205922 GN=un...	[more]

BLAST of CmoCh01G010430 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EEH8	1.3e-114	100.00	Uracil-DNA glycosylase OS=Cucurbita moschata OX=3662 GN=LOC111433476 PE=3 SV=1	[more]
A0A6J1J2E4	5.3e-111	97.18	Uracil-DNA glycosylase OS=Cucurbita maxima OX=3661 GN=LOC111480636 PE=3 SV=1	[more]
A0A5A7VER9	1.1e-105	91.12	Uracil-DNA glycosylase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold9...	[more]
A0A5D3CRN3	1.1e-105	91.12	Uracil-DNA glycosylase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1...	[more]
A0A0A0KMG3	1.9e-105	92.02	Uracil-DNA glycosylase OS=Cucumis sativus OX=3659 GN=Csa_5G289610 PE=3 SV=1	[more]

BLAST of CmoCh01G010430 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G18630.1	7.9e-59	55.80	uracil dna glycosylase	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036895	Uracil-DNA glycosylase-like domain superfamily	GENE3D	3.40.470.10		coord: 79..216 e-value: 2.0E-42 score: 147.3
IPR036895	Uracil-DNA glycosylase-like domain superfamily	SUPERFAMILY	52141	Uracil-DNA glycosylase-like	coord: 98..213
IPR002043	Uracil-DNA glycosylase family 1	PANTHER	PTHR11264	URACIL-DNA GLYCOSYLASE	coord: 25..213
IPR002043	Uracil-DNA glycosylase family 1	CDD	cd10027	UDG-F1-like	coord: 115..215 e-value: 6.63945E-56 score: 174.56
IPR018085	Uracil-DNA glycosylase, active site	PROSITE	PS00130	U_DNA_GLYCOSYLASE	coord: 154..163

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh01G010430.1	CmoCh01G010430.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0097510	base-excision repair, AP site formation via deaminated base removal
biological_process	GO:0006284	base-excision repair
biological_process	GO:0006281	DNA repair
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0005634	nucleus
molecular_function	GO:0004844	uracil DNA N-glycosylase activity
molecular_function	GO:0016799	hydrolase activity, hydrolyzing N-glycosyl compounds