CmoCh01G009330 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh01G009330
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	22.0 kDa class IV heat shock protein-like
Location	Cmo_Chr01: 5377056 .. 5377670 (-)
RNA-Seq Expression	CmoCh01G009330
Synteny	CmoCh01G009330

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCCAAATACATTCCACTTATAAAGTACTCTTCATCATCCCCCGACTTCACCCATCCACCAAAAATGGAACCATCCAAAGCAAAGAAAGCAGCACTTTTGATGTTCACTCTTCTTCTCCTGACCTCATCAACAGCCTCTCTGCTTCCATTCTCCGACCCATTTGGGATTCTGGAACAAACCCCTTTTAGCTTCCAAAACGAAAACAGAGATGCTCTGCAGCACCCACTCCAGCCCACCAGAGTGGACTGGAAGGAGACGCCGGAGAGGCATGTGATCATGCTGGATGTGCCCGGGCTTAAGAAGGGCGAGCTGAACATCGAGTTGGACGACGAAAACAGGGTCATCAAAGTGATGGGAGAGAGGAAAAGAGAGGACCAAAAACAGAGCGATCACTGGCACCGAATCGAGAGAAGCTATGGGAAATTCTGGAGGCAGTTTGGGGTGCCCAGAAATGCGGATATGGAGTCTGTTAGAGCTCGGCTGGAGAATGGGGTTCTCACTCTCACATTGTCCAAGGTCTCCCCGGAGAAGGTTAAGGATCCCAAAGTGGTGAGCATTGAAGAACCGCGGGCGGAGCTGACCAAGTCGGGCGGAGCCAAGCAGGAGCTCTGA

mRNA sequence

ATGCCCAAATACATTCCACTTATAAAGTACTCTTCATCATCCCCCGACTTCACCCATCCACCAAAAATGGAACCATCCAAAGCAAAGAAAGCAGCACTTTTGATGTTCACTCTTCTTCTCCTGACCTCATCAACAGCCTCTCTGCTTCCATTCTCCGACCCATTTGGGATTCTGGAACAAACCCCTTTTAGCTTCCAAAACGAAAACAGAGATGCTCTGCAGCACCCACTCCAGCCCACCAGAGTGGACTGGAAGGAGACGCCGGAGAGGCATGTGATCATGCTGGATGTGCCCGGGCTTAAGAAGGGCGAGCTGAACATCGAGTTGGACGACGAAAACAGGGTCATCAAAGTGATGGGAGAGAGGAAAAGAGAGGACCAAAAACAGAGCGATCACTGGCACCGAATCGAGAGAAGCTATGGGAAATTCTGGAGGCAGTTTGGGGTGCCCAGAAATGCGGATATGGAGTCTGTTAGAGCTCGGCTGGAGAATGGGGTTCTCACTCTCACATTGTCCAAGGTCTCCCCGGAGAAGGTTAAGGATCCCAAAGTGGTGAGCATTGAAGAACCGCGGGCGGAGCTGACCAAGTCGGGCGGAGCCAAGCAGGAGCTCTGA

Coding sequence (CDS)

ATGCCCAAATACATTCCACTTATAAAGTACTCTTCATCATCCCCCGACTTCACCCATCCACCAAAAATGGAACCATCCAAAGCAAAGAAAGCAGCACTTTTGATGTTCACTCTTCTTCTCCTGACCTCATCAACAGCCTCTCTGCTTCCATTCTCCGACCCATTTGGGATTCTGGAACAAACCCCTTTTAGCTTCCAAAACGAAAACAGAGATGCTCTGCAGCACCCACTCCAGCCCACCAGAGTGGACTGGAAGGAGACGCCGGAGAGGCATGTGATCATGCTGGATGTGCCCGGGCTTAAGAAGGGCGAGCTGAACATCGAGTTGGACGACGAAAACAGGGTCATCAAAGTGATGGGAGAGAGGAAAAGAGAGGACCAAAAACAGAGCGATCACTGGCACCGAATCGAGAGAAGCTATGGGAAATTCTGGAGGCAGTTTGGGGTGCCCAGAAATGCGGATATGGAGTCTGTTAGAGCTCGGCTGGAGAATGGGGTTCTCACTCTCACATTGTCCAAGGTCTCCCCGGAGAAGGTTAAGGATCCCAAAGTGGTGAGCATTGAAGAACCGCGGGCGGAGCTGACCAAGTCGGGCGGAGCCAAGCAGGAGCTCTGA

Protein sequence

MPKYIPLIKYSSSSPDFTHPPKMEPSKAKKAALLMFTLLLLTSSTASLLPFSDPFGILEQTPFSFQNENRDALQHPLQPTRVDWKETPERHVIMLDVPGLKKGELNIELDDENRVIKVMGERKREDQKQSDHWHRIERSYGKFWRQFGVPRNADMESVRARLENGVLTLTLSKVSPEKVKDPKVVSIEEPRAELTKSGGAKQEL

Homology

[Close]

BLAST of CmoCh01G009330 vs. ExPASy Swiss-Prot
Match: P30236 (22.0 kDa class IV heat shock protein OS=Glycine max OX=3847 GN=HSP22.0 PE=3 SV=1)

HSP 1 Score: 188.0 bits (476), Expect = 1.1e-46
Identity = 100/189 (52.91%), Postives = 130/189 (68.78%), Query Frame = 0


Query: 34  LMFTLLLLTSSTASLLP----------------FSDPFGILEQTPFSFQNENRDALQHPL 93
           L F LL +  +  SLLP                F DPF +LE  PF     ++D     +
Sbjct: 8   LFFLLLCVAKANGSLLPFMDPPITLLADLWSDRFPDPFRVLEHIPFGV---DKDEASMAM 67

Query: 94  QPTRVDWKETPERHVIMLDVPGLKKGELNIELDDENRVIKVMGERKREDQKQSDHWHRIE 153
            P RVDWKETPE HVIMLDVPGLK+ E+ +E+ +ENRV++V GERK+E++K+ DHWHR+E
Sbjct: 68  SPARVDWKETPEGHVIMLDVPGLKREEIKVEV-EENRVLRVSGERKKEEEKKGDHWHRVE 127

Query: 154 RSYGKFWRQFGVPRNADMESVRARLENGVLTLTLSKVSPEKVKDPKVVSI--EEPRAELT 205
           RSYGKFWRQF +P+N D++SV+A+LENGVLTLTL K+SP K+K P+VVSI  E+ +    
Sbjct: 128 RSYGKFWRQFRLPQNVDLDSVKAKLENGVLTLTLDKLSPGKIKGPRVVSIAGEDHQQGNL 187

[Close]

BLAST of CmoCh01G009330 vs. ExPASy Swiss-Prot
Match: P19244 (22.7 kDa class IV heat shock protein OS=Pisum sativum OX=3888 GN=HSP22.7 PE=2 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 2.8e-42
Identity = 84/140 (60.00%), Postives = 111/140 (79.29%), Query Frame = 0


Query: 51  FSDPFGILEQTPFSFQ-NENRDALQHPLQPTRVDWKETPERHVIMLDVPGLKKGELNIEL 110
           F DPF +LEQ P+  + +E    L H     RVDWKETPE HVIM+DVPGLKK ++ IE+
Sbjct: 49  FPDPFRVLEQIPYGVEKHEPSITLSH----ARVDWKETPEGHVIMVDVPGLKKDDIKIEV 108

Query: 111 DDENRVIKVMGERKREDQKQSDHWHRIERSYGKFWRQFGVPRNADMESVRARLENGVLTL 170
            +ENRV++V GERK+E+ K+ DHWHR+ERSYGKFWRQF +P+N D++SV+A++ENGVLTL
Sbjct: 109 -EENRVLRVSGERKKEEDKKGDHWHRVERSYGKFWRQFKLPQNVDLDSVKAKMENGVLTL 168

Query: 171 TLSKVSPEKVKDPKVVSIEE 190
           TL K+S +K+K P++VSI E
Sbjct: 169 TLHKLSHDKIKGPRMVSIVE 183

[Close]

BLAST of CmoCh01G009330 vs. ExPASy Swiss-Prot
Match: Q38806 (22.0 kDa heat shock protein OS=Arabidopsis thaliana OX=3702 GN=HSP22.0 PE=2 SV=1)

HSP 1 Score: 172.9 bits (437), Expect = 3.6e-42
Identity = 88/150 (58.67%), Postives = 113/150 (75.33%), Query Frame = 0


Query: 51  FSDPFGILEQTPFSFQNENRDALQHPLQPTRVDWKETPERHVIMLDVPGLKKGELNIELD 110
           F DPF ILE+ P   + +   A    L P RVDWKET E H IMLD+PGLKK E+ IE+ 
Sbjct: 46  FPDPFKILERIPLGLERDTSVA----LSPARVDWKETAEGHEIMLDIPGLKKDEVKIEV- 105

Query: 111 DENRVIKVMGERKREDQKQSDHWHRIERSYGKFWRQFGVPRNADMESVRARLENGVLTLT 170
           +EN V++V GERKRE++K+ D WHR+ERSYGKFWRQF +P N DMESV+A+LENGVLT+ 
Sbjct: 106 EENGVLRVSGERKREEEKKGDQWHRVERSYGKFWRQFKLPDNVDMESVKAKLENGVLTIN 165

Query: 171 LSKVSPEKVKDPKVVSI---EEPRAELTKS 198
           L+K+SPEKVK P+VV+I   E+  A+++ S
Sbjct: 166 LTKLSPEKVKGPRVVNIAAEEDQTAKISSS 190

[Close]

BLAST of CmoCh01G009330 vs. ExPASy Swiss-Prot
Match: Q7XUW5 (23.2 kDa heat shock protein OS=Oryza sativa subsp. japonica OX=39947 GN=HSP23.2 PE=2 SV=2)

HSP 1 Score: 141.0 bits (354), Expect = 1.5e-32
Identity = 68/144 (47.22%), Postives = 101/144 (70.14%), Query Frame = 0


Query: 48  LLPFSDPFGILEQTPFSFQNENRDALQHPLQPTRVDWKETPERHVIMLDVPGLKKGELNI 107
           LL  +DPF ILE  PF F  ++       L   RVDW+ET + H +++DVPG++K +L +
Sbjct: 48  LLAAADPFRILEHVPFGFDRDD----VAMLSMARVDWRETGDAHEVVVDVPGMRKEDLRV 107

Query: 108 ELDDENRVIKVMGERKREDQKQ----SDHWHRIERSYGKFWRQFGVPRNADMESVRARLE 167
           E++D NRV+++ GER+RE+  +     DHWHR ERSYG+FWRQ  +P NAD++S+ A L+
Sbjct: 108 EVED-NRVLRISGERRREETTEQKGGGDHWHREERSYGRFWRQLRLPDNADLDSIAASLD 167

Query: 168 NGVLTLTLSKVSPEKVKDPKVVSI 188
           NGVLT+   K++P+++K P+VV I
Sbjct: 168 NGVLTVRFRKLAPDQIKGPRVVGI 186

[Close]

BLAST of CmoCh01G009330 vs. ExPASy Swiss-Prot
Match: P27879 (18.1 kDa class I heat shock protein (Fragment) OS=Medicago sativa OX=3879 GN=HSP18.1 PE=2 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 3.0e-28
Identity = 68/144 (47.22%), Postives = 94/144 (65.28%), Query Frame = 0


Query: 53  DPFGILEQTPFS---FQNENRDALQHPLQ-----PTRVDWKETPERHVIMLDVPGLKKGE 112
           DPF +    PF    F N    A   P +      TR+DWKETPE HV   D+PGLKK E
Sbjct: 1   DPFSLDVWDPFKDFPFTNSALSASSFPQENSAFVSTRIDWKETPEAHVFKADLPGLKKEE 60

Query: 113 LNIELDDENRVIKVMGERKREDQKQSDHWHRIERSYGKFWRQFGVPRNADMESVRARLEN 172
           + +E++D+ RV+++ GER  E + ++D WHR+ERS GKF R+F +P NA M+ V+A +EN
Sbjct: 61  VKVEIEDD-RVLQISGERNVEKEDKNDQWHRVERSSGKFMRRFRLPENAKMDQVKAAMEN 120

Query: 173 GVLTLTLSKVSPEKVKDPKVVSIE 189
           GVLT+T+ K   E++K P+V SIE
Sbjct: 121 GVLTVTVPK---EEIKKPEVKSIE 140

[Close]

BLAST of CmoCh01G009330 vs. ExPASy TrEMBL
Match: A0A6J1EWH4 (22.0 kDa class IV heat shock protein-like OS=Cucurbita moschata OX=3662 GN=LOC111438890 PE=3 SV=1)

HSP 1 Score: 358.6 bits (919), Expect = 1.7e-95
Identity = 182/182 (100.00%), Postives = 182/182 (100.00%), Query Frame = 0


Query: 23  MEPSKAKKAALLMFTLLLLTSSTASLLPFSDPFGILEQTPFSFQNENRDALQHPLQPTRV 82
           MEPSKAKKAALLMFTLLLLTSSTASLLPFSDPFGILEQTPFSFQNENRDALQHPLQPTRV
Sbjct: 1   MEPSKAKKAALLMFTLLLLTSSTASLLPFSDPFGILEQTPFSFQNENRDALQHPLQPTRV 60

Query: 83  DWKETPERHVIMLDVPGLKKGELNIELDDENRVIKVMGERKREDQKQSDHWHRIERSYGK 142
           DWKETPERHVIMLDVPGLKKGELNIELDDENRVIKVMGERKREDQKQSDHWHRIERSYGK
Sbjct: 61  DWKETPERHVIMLDVPGLKKGELNIELDDENRVIKVMGERKREDQKQSDHWHRIERSYGK 120

Query: 143 FWRQFGVPRNADMESVRARLENGVLTLTLSKVSPEKVKDPKVVSIEEPRAELTKSGGAKQ 202
           FWRQFGVPRNADMESVRARLENGVLTLTLSKVSPEKVKDPKVVSIEEPRAELTKSGGAKQ
Sbjct: 121 FWRQFGVPRNADMESVRARLENGVLTLTLSKVSPEKVKDPKVVSIEEPRAELTKSGGAKQ 180

Query: 203 EL 205
           EL
Sbjct: 181 EL 182

[Close]

BLAST of CmoCh01G009330 vs. ExPASy TrEMBL
Match: A0A6J1ID00 (22.0 kDa class IV heat shock protein-like OS=Cucurbita maxima OX=3661 GN=LOC111471967 PE=3 SV=1)

HSP 1 Score: 336.7 bits (862), Expect = 7.0e-89
Identity = 170/182 (93.41%), Postives = 176/182 (96.70%), Query Frame = 0


Query: 23  MEPSKAKKAALLMFTLLLLTSSTASLLPFSDPFGILEQTPFSFQNENRDALQHPLQPTRV 82
           M  SKAKK ALLMFTLLLLTSSTASLLPFSDPFGILEQTPFSFQNENRDALQHPLQPTRV
Sbjct: 1   MAISKAKKPALLMFTLLLLTSSTASLLPFSDPFGILEQTPFSFQNENRDALQHPLQPTRV 60

Query: 83  DWKETPERHVIMLDVPGLKKGELNIELDDENRVIKVMGERKREDQKQSDHWHRIERSYGK 142
           DWKETPERHVIMLDVPGL K ELNIELDD+NRVIKVMGERKREDQKQSDHWHR+ERSYGK
Sbjct: 61  DWKETPERHVIMLDVPGLSKDELNIELDDQNRVIKVMGERKREDQKQSDHWHRVERSYGK 120

Query: 143 FWRQFGVPRNADMESVRARLENGVLTLTLSKVSPEKVKDPKVVSIEEPRAELTKSGGAKQ 202
           FWRQF +PRNADMESVRARLENGVLT+TLSKVSPEKVK+PKVVSIEEPRAE+TKSGGAKQ
Sbjct: 121 FWRQFRLPRNADMESVRARLENGVLTVTLSKVSPEKVKEPKVVSIEEPRAEMTKSGGAKQ 180

Query: 203 EL 205
           EL
Sbjct: 181 EL 182

[Close]

BLAST of CmoCh01G009330 vs. ExPASy TrEMBL
Match: A0A6J1F267 (22.0 kDa class IV heat shock protein-like OS=Cucurbita moschata OX=3662 GN=LOC111438859 PE=3 SV=1)

HSP 1 Score: 321.6 bits (823), Expect = 2.3e-84
Identity = 164/182 (90.11%), Postives = 171/182 (93.96%), Query Frame = 0


Query: 23  MEPSKAKKAALLMFTLLLLTSSTASLLPFSDPFGILEQTPFSFQNENRDALQHPLQPTRV 82
           M  SKAKKAALL+FTLLLLTSSTAS LPF DPFGILEQTPFSFQ+ENRDALQHPLQPTRV
Sbjct: 1   MAISKAKKAALLVFTLLLLTSSTASPLPFFDPFGILEQTPFSFQDENRDALQHPLQPTRV 60

Query: 83  DWKETPERHVIMLDVPGLKKGELNIELDDENRVIKVMGERKREDQKQSDHWHRIERSYGK 142
           DWKETPERHVIMLDVPGL + EL IELDDENRVIKVMGERKRE++KQSDHWHR+ERSYGK
Sbjct: 61  DWKETPERHVIMLDVPGLDRDELKIELDDENRVIKVMGERKREEEKQSDHWHRVERSYGK 120

Query: 143 FWRQFGVPRNADMESVRARLENGVLTLTLSKVSPEKVKDPKVVSIEEPRAELTKSGGAKQ 202
           FWRQF VPRNADMESVRARLENGVLT+TLSKVSPEKVKDPKVVSIEEPRAE  K GGAKQ
Sbjct: 121 FWRQFRVPRNADMESVRARLENGVLTVTLSKVSPEKVKDPKVVSIEEPRAEQAKLGGAKQ 180

Query: 203 EL 205
           EL
Sbjct: 181 EL 182

[Close]

BLAST of CmoCh01G009330 vs. ExPASy TrEMBL
Match: A0A5A7TDL3 (22.0 kDa class IV heat shock protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G001530 PE=3 SV=1)

HSP 1 Score: 233.8 bits (595), Expect = 6.4e-58
Identity = 123/185 (66.49%), Postives = 147/185 (79.46%), Query Frame = 0


Query: 30  KAALLMFTLL-----LLTSSTASLLPFSDPFGILEQTPFS-FQNENRDAL-QHPLQPTRV 89
           KA  L+F+ +     L+TSS  SLLPF DPFGILEQTPF   +NEN+DAL Q PL P RV
Sbjct: 5   KAIQLIFSTVFIFAFLITSSQPSLLPFIDPFGILEQTPFGLLENENKDALQQQPLPPARV 64

Query: 90  DWKETPERHVIMLDVPGLKKGELNIELDDENRVIKVMGERKREDQKQSDHWHRIERSYGK 149
           DWKET E H IM+DVPG+ K EL IELD+ENRV+KV+GERKRE++KQSDHWHR+ERSYGK
Sbjct: 65  DWKETAESHEIMVDVPGMNKEELKIELDEENRVLKVIGERKREEEKQSDHWHRLERSYGK 124

Query: 150 FWRQFGVPRNADMESVRARLENGVLTLTLSKVSPEKVKDPKVVSI---EEPRAELTKSGG 205
           FWRQ  +P NAD+ESV+A+LENGVL +TLSK+SPEK+K P+VV I   + P  E+ KSG 
Sbjct: 125 FWRQLRLPVNADLESVKAKLENGVLKITLSKLSPEKIKGPRVVGILDGQTPAGEINKSGA 184

[Close]

BLAST of CmoCh01G009330 vs. ExPASy TrEMBL
Match: A0A1S3CAU1 (22.0 kDa class IV heat shock protein OS=Cucumis melo OX=3656 GN=LOC103498616 PE=3 SV=1)

HSP 1 Score: 233.8 bits (595), Expect = 6.4e-58
Identity = 123/185 (66.49%), Postives = 147/185 (79.46%), Query Frame = 0


Query: 30  KAALLMFTLL-----LLTSSTASLLPFSDPFGILEQTPFS-FQNENRDAL-QHPLQPTRV 89
           KA  L+F+ +     L+TSS  SLLPF DPFGILEQTPF   +NEN+DAL Q PL P RV
Sbjct: 5   KAIQLIFSTVFIFAFLITSSQPSLLPFIDPFGILEQTPFGLLENENKDALQQQPLPPARV 64

Query: 90  DWKETPERHVIMLDVPGLKKGELNIELDDENRVIKVMGERKREDQKQSDHWHRIERSYGK 149
           DWKET E H IM+DVPG+ K EL IELD+ENRV+KV+GERKRE++KQSDHWHR+ERSYGK
Sbjct: 65  DWKETAESHEIMVDVPGMNKEELKIELDEENRVLKVIGERKREEEKQSDHWHRLERSYGK 124

Query: 150 FWRQFGVPRNADMESVRARLENGVLTLTLSKVSPEKVKDPKVVSI---EEPRAELTKSGG 205
           FWRQ  +P NAD+ESV+A+LENGVL +TLSK+SPEK+K P+VV I   + P  E+ KSG 
Sbjct: 125 FWRQLRLPVNADLESVKAKLENGVLKITLSKLSPEKIKGPRVVGILDEQPPAGEINKSGA 184

[Close]

BLAST of CmoCh01G009330 vs. NCBI nr
Match: XP_022932486.1 (22.0 kDa class IV heat shock protein-like [Cucurbita moschata])

HSP 1 Score: 358.6 bits (919), Expect = 3.5e-95
Identity = 182/182 (100.00%), Postives = 182/182 (100.00%), Query Frame = 0


Query: 23  MEPSKAKKAALLMFTLLLLTSSTASLLPFSDPFGILEQTPFSFQNENRDALQHPLQPTRV 82
           MEPSKAKKAALLMFTLLLLTSSTASLLPFSDPFGILEQTPFSFQNENRDALQHPLQPTRV
Sbjct: 1   MEPSKAKKAALLMFTLLLLTSSTASLLPFSDPFGILEQTPFSFQNENRDALQHPLQPTRV 60

Query: 83  DWKETPERHVIMLDVPGLKKGELNIELDDENRVIKVMGERKREDQKQSDHWHRIERSYGK 142
           DWKETPERHVIMLDVPGLKKGELNIELDDENRVIKVMGERKREDQKQSDHWHRIERSYGK
Sbjct: 61  DWKETPERHVIMLDVPGLKKGELNIELDDENRVIKVMGERKREDQKQSDHWHRIERSYGK 120

Query: 143 FWRQFGVPRNADMESVRARLENGVLTLTLSKVSPEKVKDPKVVSIEEPRAELTKSGGAKQ 202
           FWRQFGVPRNADMESVRARLENGVLTLTLSKVSPEKVKDPKVVSIEEPRAELTKSGGAKQ
Sbjct: 121 FWRQFGVPRNADMESVRARLENGVLTLTLSKVSPEKVKDPKVVSIEEPRAELTKSGGAKQ 180

Query: 203 EL 205
           EL
Sbjct: 181 EL 182

[Close]

BLAST of CmoCh01G009330 vs. NCBI nr
Match: XP_022973418.1 (22.0 kDa class IV heat shock protein-like [Cucurbita maxima])

HSP 1 Score: 336.7 bits (862), Expect = 1.4e-88
Identity = 170/182 (93.41%), Postives = 176/182 (96.70%), Query Frame = 0


Query: 23  MEPSKAKKAALLMFTLLLLTSSTASLLPFSDPFGILEQTPFSFQNENRDALQHPLQPTRV 82
           M  SKAKK ALLMFTLLLLTSSTASLLPFSDPFGILEQTPFSFQNENRDALQHPLQPTRV
Sbjct: 1   MAISKAKKPALLMFTLLLLTSSTASLLPFSDPFGILEQTPFSFQNENRDALQHPLQPTRV 60

Query: 83  DWKETPERHVIMLDVPGLKKGELNIELDDENRVIKVMGERKREDQKQSDHWHRIERSYGK 142
           DWKETPERHVIMLDVPGL K ELNIELDD+NRVIKVMGERKREDQKQSDHWHR+ERSYGK
Sbjct: 61  DWKETPERHVIMLDVPGLSKDELNIELDDQNRVIKVMGERKREDQKQSDHWHRVERSYGK 120

Query: 143 FWRQFGVPRNADMESVRARLENGVLTLTLSKVSPEKVKDPKVVSIEEPRAELTKSGGAKQ 202
           FWRQF +PRNADMESVRARLENGVLT+TLSKVSPEKVK+PKVVSIEEPRAE+TKSGGAKQ
Sbjct: 121 FWRQFRLPRNADMESVRARLENGVLTVTLSKVSPEKVKEPKVVSIEEPRAEMTKSGGAKQ 180

Query: 203 EL 205
           EL
Sbjct: 181 EL 182

[Close]

BLAST of CmoCh01G009330 vs. NCBI nr
Match: XP_022932435.1 (22.0 kDa class IV heat shock protein-like [Cucurbita moschata])

HSP 1 Score: 321.6 bits (823), Expect = 4.8e-84
Identity = 164/182 (90.11%), Postives = 171/182 (93.96%), Query Frame = 0


Query: 23  MEPSKAKKAALLMFTLLLLTSSTASLLPFSDPFGILEQTPFSFQNENRDALQHPLQPTRV 82
           M  SKAKKAALL+FTLLLLTSSTAS LPF DPFGILEQTPFSFQ+ENRDALQHPLQPTRV
Sbjct: 1   MAISKAKKAALLVFTLLLLTSSTASPLPFFDPFGILEQTPFSFQDENRDALQHPLQPTRV 60

Query: 83  DWKETPERHVIMLDVPGLKKGELNIELDDENRVIKVMGERKREDQKQSDHWHRIERSYGK 142
           DWKETPERHVIMLDVPGL + EL IELDDENRVIKVMGERKRE++KQSDHWHR+ERSYGK
Sbjct: 61  DWKETPERHVIMLDVPGLDRDELKIELDDENRVIKVMGERKREEEKQSDHWHRVERSYGK 120

Query: 143 FWRQFGVPRNADMESVRARLENGVLTLTLSKVSPEKVKDPKVVSIEEPRAELTKSGGAKQ 202
           FWRQF VPRNADMESVRARLENGVLT+TLSKVSPEKVKDPKVVSIEEPRAE  K GGAKQ
Sbjct: 121 FWRQFRVPRNADMESVRARLENGVLTVTLSKVSPEKVKDPKVVSIEEPRAEQAKLGGAKQ 180

Query: 203 EL 205
           EL
Sbjct: 181 EL 182

[Close]

BLAST of CmoCh01G009330 vs. NCBI nr
Match: XP_023523855.1 (22.0 kDa class IV heat shock protein-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 321.6 bits (823), Expect = 4.8e-84
Identity = 162/182 (89.01%), Postives = 170/182 (93.41%), Query Frame = 0


Query: 23  MEPSKAKKAALLMFTLLLLTSSTASLLPFSDPFGILEQTPFSFQNENRDALQHPLQPTRV 82
           ME SK KK ALLMFTLLLLTSSTASLLPF DPFGILEQTPFSFQN+NRDALQHPLQPTRV
Sbjct: 1   MEISKPKKPALLMFTLLLLTSSTASLLPFFDPFGILEQTPFSFQNQNRDALQHPLQPTRV 60

Query: 83  DWKETPERHVIMLDVPGLKKGELNIELDDENRVIKVMGERKREDQKQSDHWHRIERSYGK 142
           DWKETPE HV+MLDVPGL K E+ IELDDENRVIKVMGERKRE++KQSDHWHR+ERSYGK
Sbjct: 61  DWKETPESHVMMLDVPGLSKDEVKIELDDENRVIKVMGERKREEEKQSDHWHRVERSYGK 120

Query: 143 FWRQFGVPRNADMESVRARLENGVLTLTLSKVSPEKVKDPKVVSIEEPRAELTKSGGAKQ 202
           FWRQFG+PRN DMESVRARLENGVLT+TLSKVSPEKVKDPKVVSIEEPRAE  K GGAKQ
Sbjct: 121 FWRQFGLPRNVDMESVRARLENGVLTVTLSKVSPEKVKDPKVVSIEEPRAEQGKLGGAKQ 180

Query: 203 EL 205
           EL
Sbjct: 181 EL 182

[Close]

BLAST of CmoCh01G009330 vs. NCBI nr
Match: XP_008459498.1 (PREDICTED: 22.0 kDa class IV heat shock protein [Cucumis melo])

HSP 1 Score: 233.8 bits (595), Expect = 1.3e-57
Identity = 123/185 (66.49%), Postives = 147/185 (79.46%), Query Frame = 0


Query: 30  KAALLMFTLL-----LLTSSTASLLPFSDPFGILEQTPFS-FQNENRDAL-QHPLQPTRV 89
           KA  L+F+ +     L+TSS  SLLPF DPFGILEQTPF   +NEN+DAL Q PL P RV
Sbjct: 5   KAIQLIFSTVFIFAFLITSSQPSLLPFIDPFGILEQTPFGLLENENKDALQQQPLPPARV 64

Query: 90  DWKETPERHVIMLDVPGLKKGELNIELDDENRVIKVMGERKREDQKQSDHWHRIERSYGK 149
           DWKET E H IM+DVPG+ K EL IELD+ENRV+KV+GERKRE++KQSDHWHR+ERSYGK
Sbjct: 65  DWKETAESHEIMVDVPGMNKEELKIELDEENRVLKVIGERKREEEKQSDHWHRLERSYGK 124

Query: 150 FWRQFGVPRNADMESVRARLENGVLTLTLSKVSPEKVKDPKVVSI---EEPRAELTKSGG 205
           FWRQ  +P NAD+ESV+A+LENGVL +TLSK+SPEK+K P+VV I   + P  E+ KSG 
Sbjct: 125 FWRQLRLPVNADLESVKAKLENGVLKITLSKLSPEKIKGPRVVGILDEQPPAGEINKSGA 184

[Close]

BLAST of CmoCh01G009330 vs. TAIR 10
Match: AT4G10250.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 172.9 bits (437), Expect = 2.6e-43
Identity = 88/150 (58.67%), Postives = 113/150 (75.33%), Query Frame = 0


Query: 51  FSDPFGILEQTPFSFQNENRDALQHPLQPTRVDWKETPERHVIMLDVPGLKKGELNIELD 110
           F DPF ILE+ P   + +   A    L P RVDWKET E H IMLD+PGLKK E+ IE+ 
Sbjct: 46  FPDPFKILERIPLGLERDTSVA----LSPARVDWKETAEGHEIMLDIPGLKKDEVKIEV- 105

Query: 111 DENRVIKVMGERKREDQKQSDHWHRIERSYGKFWRQFGVPRNADMESVRARLENGVLTLT 170
           +EN V++V GERKRE++K+ D WHR+ERSYGKFWRQF +P N DMESV+A+LENGVLT+ 
Sbjct: 106 EENGVLRVSGERKREEEKKGDQWHRVERSYGKFWRQFKLPDNVDMESVKAKLENGVLTIN 165

Query: 171 LSKVSPEKVKDPKVVSI---EEPRAELTKS 198
           L+K+SPEKVK P+VV+I   E+  A+++ S
Sbjct: 166 LTKLSPEKVKGPRVVNIAAEEDQTAKISSS 190

[Close]

BLAST of CmoCh01G009330 vs. TAIR 10
Match: AT5G59720.1 (heat shock protein 18.2 )

HSP 1 Score: 119.0 bits (297), Expect = 4.4e-27
Identity = 58/108 (53.70%), Postives = 84/108 (77.78%), Query Frame = 0


Query: 81  RVDWKETPERHVIMLDVPGLKKGELNIELDDENRVIKVMGERKREDQKQSDHWHRIERSY 140
           RVDWKETPE HV   D+PGLKK E+ +E++D+N V+++ GER +E+++++D WHR+ER+ 
Sbjct: 53  RVDWKETPEAHVFKADLPGLKKEEVKVEVEDKN-VLQISGERSKENEEKNDKWHRVERAS 112

Query: 141 GKFWRQFGVPRNADMESVRARLENGVLTLTLSKVSPEKVKDPKVVSIE 189
           GKF R+F +P NA ME V+A +ENGVLT+ + K +PE  K P+V SI+
Sbjct: 113 GKFMRRFRLPENAKMEEVKATMENGVLTVVVPK-APE--KKPQVKSID 156

[Close]

BLAST of CmoCh01G009330 vs. TAIR 10
Match: AT3G46230.1 (heat shock protein 17.4 )

HSP 1 Score: 115.9 bits (289), Expect = 3.7e-26
Identity = 55/108 (50.93%), Postives = 81/108 (75.00%), Query Frame = 0


Query: 81  RVDWKETPERHVIMLDVPGLKKGELNIELDDENRVIKVMGERKREDQKQSDHWHRIERSY 140
           +VDW+ETPE HV   DVPGLKK E+ +E++D N ++++ GER  E++++SD WHR+ERS 
Sbjct: 50  KVDWRETPEAHVFKADVPGLKKEEVKVEVEDGN-ILQISGERSSENEEKSDTWHRVERSS 109

Query: 141 GKFWRQFGVPRNADMESVRARLENGVLTLTLSKVSPEKVKDPKVVSIE 189
           GKF R+F +P NA +E V+A +ENGVL++T+ KV   K   P+V S++
Sbjct: 110 GKFMRRFRLPENAKVEEVKASMENGVLSVTVPKVQESK---PEVKSVD 153

[Close]

BLAST of CmoCh01G009330 vs. TAIR 10
Match: AT1G53540.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 115.2 bits (287), Expect = 6.4e-26
Identity = 53/107 (49.53%), Postives = 81/107 (75.70%), Query Frame = 0


Query: 81  RVDWKETPERHVIMLDVPGLKKGELNIELDDENRVIKVMGERKREDQKQSDHWHRIERSY 140
           +VDW+ETPE HV   D+PGL+K E+ +E++D N ++++ GER  E+++++D WHR+ERS 
Sbjct: 51  KVDWRETPEAHVFKADLPGLRKEEVKVEVEDGN-ILQISGERSNENEEKNDKWHRVERSS 110

Query: 141 GKFWRQFGVPRNADMESVRARLENGVLTLTLSKVSPEKVKDPKVVSI 188
           GKF R+F +P NA ME ++A +ENGVL++T+ KV PEK  + K + I
Sbjct: 111 GKFTRRFRLPENAKMEEIKASMENGVLSVTVPKV-PEKKPEVKSIDI 155

[Close]

BLAST of CmoCh01G009330 vs. TAIR 10
Match: AT1G59860.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 111.3 bits (277), Expect = 9.2e-25
Identity = 61/139 (43.88%), Postives = 89/139 (64.03%), Query Frame = 0


Query: 53  DPFGILEQTPF---SFQNENRDALQHPLQPTRVDWKETPERHVIMLDVPGLKKGELNIEL 112
           DPF +    PF    F + +  A+ +     RVDWKET E HV   D+PG+KK E+ +E+
Sbjct: 20  DPFSLDVWDPFKELQFPSSSSSAIAN----ARVDWKETAEAHVFKADLPGMKKEEVKVEI 79

Query: 113 DDENRVIKVMGERKREDQKQSDHWHRIERSYGKFWRQFGVPRNADMESVRARLENGVLTL 172
           +D++ V+K+ GER  E +++ D WHR+ERS G F R+F +P N  M+ V+A +ENGVLT+
Sbjct: 80  EDDS-VLKISGERHVEKEEKQDTWHRVERSSGGFSRKFRLPENVKMDQVKASMENGVLTV 139

Query: 173 TLSKVSPEKVKDPKVVSIE 189
           T+ KV   K K  +V SI+
Sbjct: 140 TVPKVETNK-KKAQVKSID 152

The following BLAST results are available for this feature:

BLAST of CmoCh01G009330 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P30236	1.1e-46	52.91	22.0 kDa class IV heat shock protein OS=Glycine max OX=3847 GN=HSP22.0 PE=3 SV=1	[more]
P19244	2.8e-42	60.00	22.7 kDa class IV heat shock protein OS=Pisum sativum OX=3888 GN=HSP22.7 PE=2 SV...	[more]
Q38806	3.6e-42	58.67	22.0 kDa heat shock protein OS=Arabidopsis thaliana OX=3702 GN=HSP22.0 PE=2 SV=1	[more]
Q7XUW5	1.5e-32	47.22	23.2 kDa heat shock protein OS=Oryza sativa subsp. japonica OX=39947 GN=HSP23.2 ...	[more]
P27879	3.0e-28	47.22	18.1 kDa class I heat shock protein (Fragment) OS=Medicago sativa OX=3879 GN=HSP...	[more]

BLAST of CmoCh01G009330 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EWH4	1.7e-95	100.00	22.0 kDa class IV heat shock protein-like OS=Cucurbita moschata OX=3662 GN=LOC11...	[more]
A0A6J1ID00	7.0e-89	93.41	22.0 kDa class IV heat shock protein-like OS=Cucurbita maxima OX=3661 GN=LOC1114...	[more]
A0A6J1F267	2.3e-84	90.11	22.0 kDa class IV heat shock protein-like OS=Cucurbita moschata OX=3662 GN=LOC11...	[more]
A0A5A7TDL3	6.4e-58	66.49	22.0 kDa class IV heat shock protein OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A1S3CAU1	6.4e-58	66.49	22.0 kDa class IV heat shock protein OS=Cucumis melo OX=3656 GN=LOC103498616 PE=...	[more]

BLAST of CmoCh01G009330 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022932486.1	3.5e-95	100.00	22.0 kDa class IV heat shock protein-like [Cucurbita moschata]	[more]
XP_022973418.1	1.4e-88	93.41	22.0 kDa class IV heat shock protein-like [Cucurbita maxima]	[more]
XP_022932435.1	4.8e-84	90.11	22.0 kDa class IV heat shock protein-like [Cucurbita moschata]	[more]
XP_023523855.1	4.8e-84	89.01	22.0 kDa class IV heat shock protein-like [Cucurbita pepo subsp. pepo]	[more]
XP_008459498.1	1.3e-57	66.49	PREDICTED: 22.0 kDa class IV heat shock protein [Cucumis melo]	[more]

BLAST of CmoCh01G009330 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G10250.1	2.6e-43	58.67	HSP20-like chaperones superfamily protein	[more]
AT5G59720.1	4.4e-27	53.70	heat shock protein 18.2	[more]
AT3G46230.1	3.7e-26	50.93	heat shock protein 17.4	[more]
AT1G53540.1	6.4e-26	49.53	HSP20-like chaperones superfamily protein	[more]
AT1G59860.1	9.2e-25	43.88	HSP20-like chaperones superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008978	HSP20-like chaperone	GENE3D	2.60.40.790		coord: 46..188 e-value: 5.3E-34 score: 119.1
IPR008978	HSP20-like chaperone	SUPERFAMILY	49764	HSP20-like chaperones	coord: 74..184
IPR002068	Alpha crystallin/Hsp20 domain	PFAM	PF00011	HSP20	coord: 83..187 e-value: 9.3E-27 score: 93.2
IPR002068	Alpha crystallin/Hsp20 domain	PROSITE	PS01031	SHSP	coord: 72..190 score: 24.856573
None	No IPR available	PANTHER	PTHR11527:SF267	22.0 KDA HEAT SHOCK PROTEIN	coord: 32..191
None	No IPR available	CDD	cd06472	ACD_ScHsp26_like	coord: 81..173 e-value: 3.16607E-42 score: 135.51
IPR031107	Small heat shock protein HSP20	PANTHER	PTHR11527	HEAT-SHOCK PROTEIN 20 FAMILY MEMBER	coord: 32..191

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh01G009330.1	CmoCh01G009330.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051259	protein complex oligomerization
biological_process	GO:0006457	protein folding
biological_process	GO:0009408	response to heat
biological_process	GO:0042542	response to hydrogen peroxide
biological_process	GO:0009651	response to salt stress
molecular_function	GO:0043621	protein self-association
molecular_function	GO:0051082	unfolded protein binding