CmoCh01G009000 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh01G009000
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
Description40S ribosomal protein S9-2-like
LocationCmo_Chr01: 5007985 .. 5010116 (-)
RNA-Seq ExpressionCmoCh01G009000
SyntenyCmoCh01G009000
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGATAGTGTAAAAACCCTAGCCGCTTCTCTACACTCTTTTGCTTCAGGGGTGCCTCTCTTCTCCTCTCCTTTGCATTCGAGATCATTCAGTTAGTGAAGACGTAGCAGAGAAGAGATCATGGTGCACGTCTCTTTCTATAGGAACTGTAAGTATAAAGCTCCGATGCATATCCATTCTCATCTAATTTGTTCGTCAAAGATCTGTCATGTATGTTTTCTTTTTCATTACCGATTTTTTAGAACTTCTGTTTGGATTCCTTTTCGTTGTTTCTTCGATTGGGTTCTCCGATTGTGTTTCGCATACATTATGCAACTTTGTTGATCTAGTAGCTGGAAGATTTCTGAGGATTTAATTCGTTTTACTTGAATATTGGAACTCTTTTTGTGAGCTTCTGATGTTAGCTTCACTTGTTGGATCGTTGAGCATGTTGTAGAATTGGTGACATTGGGTTTAAAGGAGTTATGATGCTTGACTATCTTATCTCAGCTTTTTATTTTTCATAATTTTGTTCACTGCATTATGTGGAGATTAGTATATGATATAGTTCATCTTATGTGACGACTTATAAAACGTAATGCGTCTTCTTGGTGTTTTTGCTGAAAGCGGAGATAATTGTATCTTGGGTTTTATCTCTATGTAGATGGGAAGACTTTCAAGAAACCCCGACGTCCTTATGAGAAGGAGCGTTTGGATGCAGAGTTGAAGTTGGTTGGAGAATATGGGCTTCGTTGTAAGAGGGAGTTGTGGAGGGTTCAATATGCATTGAGCCGAATCCGAAACAATGCTCGGATGCTCTTAACGCTTGATGAAAAGAACCCGCGTAGGATTTTTGAGGGAGAGGCTCTGCTTAGGAGGATGAACAGGTATGGTCTTTTGGATGAGAGTCAGAGCAAGCTCGATTATGTCTTGGCCCTTACTGTGGAGAATTTCCTTGAGCGTCGTCTCCAAACTCTCGTGTTCAAGTCTGGTATGGCAAAGTCAATCCATCATGCTAGAGTGCTCATCAGGCAAAAGCATATAAGGTAGAGTGACAGAATTCATTTATTCATACTCTCTAATATCTTTCCTATGCATACCAATAACATTTTTCCTTCCATGAGCTATTCTCATTCGTTCTTACATCGTCGTACAAAATTCTTAGTGCTAGATGGTCAACTTTTACAGATATCTATATTTGTATTCTGAGGATTAAAAGTTGTTGTGCTGCTTTGCAAAATAATAAGTTCATTATTGTTGTGCGATTATTTTGAGAGTAGTTTTGGCTTGGCTAAGTGTACATTTGTCATAGGCAAGAAGTCTGGCATGTTTATTACAAGAAAATTTTCTCCCTGCCCAAAATTATTATATTTAGGAATAACATAGAAATGCCTGAGGAAAAAGCCAAAGGCATGCTTTGCGAGCAATATTTGTGGACTTATTTTTTACCCAAGTGCTCGAATGACGTTTAAAAGAAGTCGAGTTGAATTATCACTGTGATATAGGATTAAACACCTTTTATGCAAGTGTGTATACTTCGAGGTGCTTTTGATGTAATTGGATTAAACACCTGTGCATATTTCAAAGTGATTTTGATGTAATTTGACTCGTAAGTACACTGTTCCTCTATTGTGGATGTGAAGTTTTTGTTAATATTTGTCACGTTTCTCTTGTTTTCTTTAGGGTTGGAAGGCAGGTCGTGAACATCCCTTCTTTCATGGTGAGGGTCGATTCCCAGAAGCACATAGACTTCTCTCTTACAAGTCCGTTTGGAGGCGGGCGTCCTGGAAGGGTGAAAAGAAGGAATCAGAAGGCAGCTGCAAAGAAGGCTGCTGGAGGAGATGGAGATGAAGAAGATGAGGATTGAGTTATCGACTGAGAAATAATGAGATTAGCCCTCAATCTATATCTTTTATCTATCACTATTTATGAGGGAGAATATTTTATCTTTTTAGAAGTTTTGGTTAAAATACTTTTGAATTAGAGAACTCGTTTGTTATTATTATTGGTTTTTTGTCATGAGAATTAGCTTTTAACCTATTTGGTTTTAGTTGCCACAGTTTTCTGCATCACTTGAGCCACTTTGTTTTCCTCAATACTCCAATGCATTATGAATCTATTGCGTTGATTTAATCTAATTTGGATCGCAGCTTAT

mRNA sequence

TGATAGTGTAAAAACCCTAGCCGCTTCTCTACACTCTTTTGCTTCAGGGGTGCCTCTCTTCTCCTCTCCTTTGCATTCGAGATCATTCAGTTAGTGAAGACGTAGCAGAGAAGAGATCATGGTGCACGTCTCTTTCTATAGGAACTATGGGAAGACTTTCAAGAAACCCCGACGTCCTTATGAGAAGGAGCGTTTGGATGCAGAGTTGAAGTTGGTTGGAGAATATGGGCTTCGTTGTAAGAGGGAGTTGTGGAGGGTTCAATATGCATTGAGCCGAATCCGAAACAATGCTCGGATGCTCTTAACGCTTGATGAAAAGAACCCGCGTAGGATTTTTGAGGGAGAGGCTCTGCTTAGGAGGATGAACAGGTATGGTCTTTTGGATGAGAGTCAGAGCAAGCTCGATTATGTCTTGGCCCTTACTGTGGAGAATTTCCTTGAGCGTCGTCTCCAAACTCTCGTGTTCAAGTCTGGTATGGCAAAGTCAATCCATCATGCTAGAGTGCTCATCAGGCAAAAGCATATAAGGGTTGGAAGGCAGGTCGTGAACATCCCTTCTTTCATGGTGAGGGTCGATTCCCAGAAGCACATAGACTTCTCTCTTACAAGTCCGTTTGGAGGCGGGCGTCCTGGAAGGGTGAAAAGAAGGAATCAGAAGGCAGCTGCAAAGAAGGCTGCTGGAGGAGATGGAGATGAAGAAGATGAGGATTGAGTTATCGACTGAGAAATAATGAGATTAGCCCTCAATCTATATCTTTTATCTATCACTATTTATGAGGGAGAATATTTTATCTTTTTAGAAGTTTTGGTTAAAATACTTTTGAATTAGAGAACTCGTTTGTTATTATTATTGGTTTTTTGTCATGAGAATTAGCTTTTAACCTATTTGGTTTTAGTTGCCACAGTTTTCTGCATCACTTGAGCCACTTTGTTTTCCTCAATACTCCAATGCATTATGAATCTATTGCGTTGATTTAATCTAATTTGGATCGCAGCTTAT

Coding sequence (CDS)

ATGGTGCACGTCTCTTTCTATAGGAACTATGGGAAGACTTTCAAGAAACCCCGACGTCCTTATGAGAAGGAGCGTTTGGATGCAGAGTTGAAGTTGGTTGGAGAATATGGGCTTCGTTGTAAGAGGGAGTTGTGGAGGGTTCAATATGCATTGAGCCGAATCCGAAACAATGCTCGGATGCTCTTAACGCTTGATGAAAAGAACCCGCGTAGGATTTTTGAGGGAGAGGCTCTGCTTAGGAGGATGAACAGGTATGGTCTTTTGGATGAGAGTCAGAGCAAGCTCGATTATGTCTTGGCCCTTACTGTGGAGAATTTCCTTGAGCGTCGTCTCCAAACTCTCGTGTTCAAGTCTGGTATGGCAAAGTCAATCCATCATGCTAGAGTGCTCATCAGGCAAAAGCATATAAGGGTTGGAAGGCAGGTCGTGAACATCCCTTCTTTCATGGTGAGGGTCGATTCCCAGAAGCACATAGACTTCTCTCTTACAAGTCCGTTTGGAGGCGGGCGTCCTGGAAGGGTGAAAAGAAGGAATCAGAAGGCAGCTGCAAAGAAGGCTGCTGGAGGAGATGGAGATGAAGAAGATGAGGATTGA

Protein sequence

MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARMLLTLDEKNPRRIFEGEALLRRMNRYGLLDESQSKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLIRQKHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRRNQKAAAKKAAGGDGDEEDED
Homology
[Close]
BLAST of CmoCh01G009000 vs. ExPASy Swiss-Prot
Match: Q9FLF0 (40S ribosomal protein S9-2 OS=Arabidopsis thaliana OX=3702 GN=RPS9C PE=1 SV=1)

HSP 1 Score: 359.0 bits (920), Expect = 3.4e-98
Identity = 179/197 (90.86%), Postives = 192/197 (97.46%), Query Frame = 0 

Query: 1   MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM 60
           MV+V FYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQY LSRIRN AR 
Sbjct: 1   MVNVRFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYTLSRIRNAARE 60

Query: 61  LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQSKLDYVLALTVENFLERRLQTLVFKSGM 120
           LLTLDEKNPRRIFEGEALLRRMNRYGLLDE+Q+KLDYVLALTVENFLERRLQT+VFKSGM
Sbjct: 61  LLTLDEKNPRRIFEGEALLRRMNRYGLLDETQNKLDYVLALTVENFLERRLQTIVFKSGM 120

Query: 121 AKSIHHARVLIRQKHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRRNQK 180
           AKSIHHARVLIRQ+HIRVGRQ+VNIPSFMVRV+SQKH+DFSLTSPFGGGRPGRVKRRN++
Sbjct: 121 AKSIHHARVLIRQRHIRVGRQLVNIPSFMVRVESQKHVDFSLTSPFGGGRPGRVKRRNER 180

Query: 181 AAAKKAAGGDGDEEDED 198
           A AKKA+GGDGDE+DE+
Sbjct: 181 AGAKKASGGDGDEDDEE 197

[Close]
BLAST of CmoCh01G009000 vs. ExPASy Swiss-Prot
Match: Q9LXG1 (40S ribosomal protein S9-1 OS=Arabidopsis thaliana OX=3702 GN=RPS9B PE=1 SV=1)

HSP 1 Score: 340.5 bits (872), Expect = 1.3e-92
Identity = 172/198 (86.87%), Postives = 190/198 (95.96%), Query Frame = 0 

Query: 1   MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM 60
           MVHV +YRNYGKTFK PRRPYEKERLD+ELKLVGEYGLR KRELWRVQY+LSRIRN AR 
Sbjct: 1   MVHVCYYRNYGKTFKGPRRPYEKERLDSELKLVGEYGLRNKRELWRVQYSLSRIRNAARD 60

Query: 61  LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQSKLDYVLALTVENFLERRLQTLVFKSGM 120
           LLTLDEK+PRRIFEGEALLRRMNRYGLLDESQ+KLDYVLALTVENFLERRLQT+VFKSGM
Sbjct: 61  LLTLDEKSPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTIVFKSGM 120

Query: 121 AKSIHHARVLIRQKHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRRNQK 180
           AKSIHH+RVLIRQ+HIRVG+Q+VNIPSFMVR+DSQKHIDF+LTSPFGGGRPGRVKRRN+K
Sbjct: 121 AKSIHHSRVLIRQRHIRVGKQLVNIPSFMVRLDSQKHIDFALTSPFGGGRPGRVKRRNEK 180

Query: 181 AAAKKAAGG---DGDEED 196
           +A+KKA+GG   DGD+E+
Sbjct: 181 SASKKASGGGDADGDDEE 198

[Close]
BLAST of CmoCh01G009000 vs. ExPASy Swiss-Prot
Match: P52810 (40S ribosomal protein S9 OS=Podospora anserina OX=2587412 GN=RPS9 PE=3 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 1.0e-70
Identity = 139/191 (72.77%), Postives = 164/191 (85.86%), Query Frame = 0 

Query: 8   RNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARMLLTLDEK 67
           R+Y KT K PRRP+E  RLD+ELKLVGEYGLR KRE+WRV   LS+IR  AR LLTLDEK
Sbjct: 4   RSYSKTAKVPRRPFEAARLDSELKLVGEYGLRNKREVWRVLLTLSKIRRAARELLTLDEK 63

Query: 68  NPRRIFEGEALLRRMNRYGLLDESQSKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHA 127
           +P+R+FEG AL+RR+ R G+LDES+ KLDYVLAL  E+FLERRLQTLV+K G+AKSIHHA
Sbjct: 64  DPKRLFEGNALIRRLVRVGVLDESRMKLDYVLALKAEDFLERRLQTLVYKLGLAKSIHHA 123

Query: 128 RVLIRQKHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRRNQKAAAKKAA 187
           RVLIRQ+HIRVG+Q+VN+PSF+VR+DSQKHIDF+LTSPFGGGRPGRV+R+     AK A 
Sbjct: 124 RVLIRQRHIRVGKQIVNVPSFVVRLDSQKHIDFALTSPFGGGRPGRVRRKK----AKAAE 183

Query: 188 GGDGD-EEDED 198
           GGDGD EEDE+
Sbjct: 184 GGDGDAEEDEE 190

[Close]
BLAST of CmoCh01G009000 vs. ExPASy Swiss-Prot
Match: A6QLG5 (40S ribosomal protein S9 OS=Bos taurus OX=9913 GN=RPS9 PE=2 SV=1)

HSP 1 Score: 261.2 bits (666), Expect = 9.8e-69
Identity = 131/184 (71.20%), Postives = 155/184 (84.24%), Query Frame = 0 

Query: 12  KTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARMLLTLDEKNPRR 71
           KT+  PRRP+EK RLD ELKL+GEYGLR KRE+WRV++ L++IR  AR LLTLDEK+PRR
Sbjct: 11  KTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRR 70

Query: 72  IFEGEALLRRMNRYGLLDESQSKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLI 131
           +FEG ALLRR+ R G+LDE + KLDY+L L +E+FLERRLQT VFK G+AKSIHHARVLI
Sbjct: 71  LFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLI 130

Query: 132 RQKHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRRNQKAAAKKAAGGDG 191
           RQ+HIRV +QVVNIPSF+VR+DSQKHIDFSL SP+GGGRPGRVKR+N K     A  GD 
Sbjct: 131 RQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRVKRKNAKKGQGGAGAGDD 190

Query: 192 DEED 196
           +EED
Sbjct: 191 EEED 194

[Close]
BLAST of CmoCh01G009000 vs. ExPASy Swiss-Prot
Match: P46781 (40S ribosomal protein S9 OS=Homo sapiens OX=9606 GN=RPS9 PE=1 SV=3)

HSP 1 Score: 261.2 bits (666), Expect = 9.8e-69
Identity = 131/184 (71.20%), Postives = 155/184 (84.24%), Query Frame = 0 

Query: 12  KTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARMLLTLDEKNPRR 71
           KT+  PRRP+EK RLD ELKL+GEYGLR KRE+WRV++ L++IR  AR LLTLDEK+PRR
Sbjct: 11  KTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRR 70

Query: 72  IFEGEALLRRMNRYGLLDESQSKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLI 131
           +FEG ALLRR+ R G+LDE + KLDY+L L +E+FLERRLQT VFK G+AKSIHHARVLI
Sbjct: 71  LFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLI 130

Query: 132 RQKHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRRNQKAAAKKAAGGDG 191
           RQ+HIRV +QVVNIPSF+VR+DSQKHIDFSL SP+GGGRPGRVKR+N K     A  GD 
Sbjct: 131 RQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRVKRKNAKKGQGGAGAGDD 190

Query: 192 DEED 196
           +EED
Sbjct: 191 EEED 194

[Close]
BLAST of CmoCh01G009000 vs. ExPASy TrEMBL
Match: A0A6J1GBU2 (40S ribosomal protein S9-2-like OS=Cucurbita moschata OX=3662 GN=LOC111452742 PE=3 SV=1)

HSP 1 Score: 386.0 bits (990), Expect = 9.7e-104
Identity = 197/197 (100.00%), Postives = 197/197 (100.00%), Query Frame = 0 

Query: 1   MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM 60
           MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM
Sbjct: 1   MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM 60

Query: 61  LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQSKLDYVLALTVENFLERRLQTLVFKSGM 120
           LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQSKLDYVLALTVENFLERRLQTLVFKSGM
Sbjct: 61  LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQSKLDYVLALTVENFLERRLQTLVFKSGM 120

Query: 121 AKSIHHARVLIRQKHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRRNQK 180
           AKSIHHARVLIRQKHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRRNQK
Sbjct: 121 AKSIHHARVLIRQKHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRRNQK 180

Query: 181 AAAKKAAGGDGDEEDED 198
           AAAKKAAGGDGDEEDED
Sbjct: 181 AAAKKAAGGDGDEEDED 197

[Close]
BLAST of CmoCh01G009000 vs. ExPASy TrEMBL
Match: A0A6J1HZN1 (40S ribosomal protein S9-2 OS=Cucurbita maxima OX=3661 GN=LOC111467686 PE=3 SV=1)

HSP 1 Score: 384.8 bits (987), Expect = 2.2e-103
Identity = 196/197 (99.49%), Postives = 197/197 (100.00%), Query Frame = 0 

Query: 1   MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM 60
           MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM
Sbjct: 1   MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM 60

Query: 61  LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQSKLDYVLALTVENFLERRLQTLVFKSGM 120
           LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQ+KLDYVLALTVENFLERRLQTLVFKSGM
Sbjct: 61  LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 120

Query: 121 AKSIHHARVLIRQKHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRRNQK 180
           AKSIHHARVLIRQKHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRRNQK
Sbjct: 121 AKSIHHARVLIRQKHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRRNQK 180

Query: 181 AAAKKAAGGDGDEEDED 198
           AAAKKAAGGDGDEEDED
Sbjct: 181 AAAKKAAGGDGDEEDED 197

[Close]
BLAST of CmoCh01G009000 vs. ExPASy TrEMBL
Match: A0A6J1FZI5 (40S ribosomal protein S9-2 OS=Cucurbita moschata OX=3662 GN=LOC111449338 PE=3 SV=1)

HSP 1 Score: 384.8 bits (987), Expect = 2.2e-103
Identity = 196/197 (99.49%), Postives = 197/197 (100.00%), Query Frame = 0 

Query: 1   MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM 60
           MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM
Sbjct: 1   MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM 60

Query: 61  LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQSKLDYVLALTVENFLERRLQTLVFKSGM 120
           LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQ+KLDYVLALTVENFLERRLQTLVFKSGM
Sbjct: 61  LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 120

Query: 121 AKSIHHARVLIRQKHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRRNQK 180
           AKSIHHARVLIRQKHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRRNQK
Sbjct: 121 AKSIHHARVLIRQKHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRRNQK 180

Query: 181 AAAKKAAGGDGDEEDED 198
           AAAKKAAGGDGDEEDED
Sbjct: 181 AAAKKAAGGDGDEEDED 197

[Close]
BLAST of CmoCh01G009000 vs. ExPASy TrEMBL
Match: A0A6J1JAT4 (40S ribosomal protein S9-2-like OS=Cucurbita maxima OX=3661 GN=LOC111485110 PE=3 SV=1)

HSP 1 Score: 383.6 bits (984), Expect = 4.8e-103
Identity = 195/197 (98.98%), Postives = 197/197 (100.00%), Query Frame = 0 

Query: 1   MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM 60
           MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM
Sbjct: 1   MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM 60

Query: 61  LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQSKLDYVLALTVENFLERRLQTLVFKSGM 120
           LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQ+KLDYVLALTVENFLERRLQTLVFKSGM
Sbjct: 61  LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 120

Query: 121 AKSIHHARVLIRQKHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRRNQK 180
           AKSIHHARVLIRQKHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKR+NQK
Sbjct: 121 AKSIHHARVLIRQKHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRKNQK 180

Query: 181 AAAKKAAGGDGDEEDED 198
           AAAKKAAGGDGDEEDED
Sbjct: 181 AAAKKAAGGDGDEEDED 197

[Close]
BLAST of CmoCh01G009000 vs. ExPASy TrEMBL
Match: A0A0A0KSN1 (S4 RNA-binding domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G604980 PE=3 SV=1)

HSP 1 Score: 383.6 bits (984), Expect = 4.8e-103
Identity = 195/197 (98.98%), Postives = 197/197 (100.00%), Query Frame = 0 

Query: 1   MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM 60
           MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM
Sbjct: 1   MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM 60

Query: 61  LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQSKLDYVLALTVENFLERRLQTLVFKSGM 120
           LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQ+KLDYVLALTVENFLERRLQTLVFKSGM
Sbjct: 61  LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 120

Query: 121 AKSIHHARVLIRQKHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRRNQK 180
           AKSIHHARVLIRQKHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKR+NQK
Sbjct: 121 AKSIHHARVLIRQKHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRKNQK 180

Query: 181 AAAKKAAGGDGDEEDED 198
           AAAKKAAGGDGDEEDED
Sbjct: 181 AAAKKAAGGDGDEEDED 197

[Close]
BLAST of CmoCh01G009000 vs. NCBI nr
Match: XP_022949366.1 (40S ribosomal protein S9-2-like [Cucurbita moschata])

HSP 1 Score: 386.0 bits (990), Expect = 2.0e-103
Identity = 197/197 (100.00%), Postives = 197/197 (100.00%), Query Frame = 0 

Query: 1   MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM 60
           MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM
Sbjct: 1   MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM 60

Query: 61  LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQSKLDYVLALTVENFLERRLQTLVFKSGM 120
           LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQSKLDYVLALTVENFLERRLQTLVFKSGM
Sbjct: 61  LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQSKLDYVLALTVENFLERRLQTLVFKSGM 120

Query: 121 AKSIHHARVLIRQKHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRRNQK 180
           AKSIHHARVLIRQKHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRRNQK
Sbjct: 121 AKSIHHARVLIRQKHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRRNQK 180

Query: 181 AAAKKAAGGDGDEEDED 198
           AAAKKAAGGDGDEEDED
Sbjct: 181 AAAKKAAGGDGDEEDED 197

[Close]
BLAST of CmoCh01G009000 vs. NCBI nr
Match: XP_022944955.1 (40S ribosomal protein S9-2 [Cucurbita moschata] >XP_022968439.1 40S ribosomal protein S9-2 [Cucurbita maxima] >XP_022973398.1 40S ribosomal protein S9-2 [Cucurbita maxima] >XP_023525066.1 40S ribosomal protein S9-2 [Cucurbita pepo subsp. pepo] >XP_023541316.1 40S ribosomal protein S9-2 [Cucurbita pepo subsp. pepo] >KAG6574094.1 40S ribosomal protein S9-2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7013152.1 40S ribosomal protein S9-2 [Cucurbita argyrosperma subsp. argyrosperma] >KAG6607518.1 40S ribosomal protein S9-2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 384.8 bits (987), Expect = 4.5e-103
Identity = 196/197 (99.49%), Postives = 197/197 (100.00%), Query Frame = 0 

Query: 1   MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM 60
           MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM
Sbjct: 1   MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM 60

Query: 61  LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQSKLDYVLALTVENFLERRLQTLVFKSGM 120
           LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQ+KLDYVLALTVENFLERRLQTLVFKSGM
Sbjct: 61  LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 120

Query: 121 AKSIHHARVLIRQKHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRRNQK 180
           AKSIHHARVLIRQKHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRRNQK
Sbjct: 121 AKSIHHARVLIRQKHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRRNQK 180

Query: 181 AAAKKAAGGDGDEEDED 198
           AAAKKAAGGDGDEEDED
Sbjct: 181 AAAKKAAGGDGDEEDED 197

[Close]
BLAST of CmoCh01G009000 vs. NCBI nr
Match: XP_004135180.1 (40S ribosomal protein S9-2 [Cucumis sativus] >XP_004141548.1 40S ribosomal protein S9-2 [Cucumis sativus] >XP_008446334.1 PREDICTED: 40S ribosomal protein S9-2 [Cucumis melo] >XP_008459594.1 PREDICTED: 40S ribosomal protein S9-2 [Cucumis melo] >XP_022925366.1 40S ribosomal protein S9-2-like [Cucurbita moschata] >XP_022957390.1 40S ribosomal protein S9-2-like [Cucurbita moschata] >XP_022973538.1 40S ribosomal protein S9-2-like [Cucurbita maxima] >XP_022987602.1 40S ribosomal protein S9-2-like [Cucurbita maxima] >XP_023535520.1 40S ribosomal protein S9-2-like [Cucurbita pepo subsp. pepo] >XP_023552855.1 40S ribosomal protein S9-2-like [Cucurbita pepo subsp. pepo] >XP_038891088.1 40S ribosomal protein S9-2-like [Benincasa hispida] >KAA0034405.1 40S ribosomal protein S9-2-like [Cucumis melo var. makuwa] >KAG6592358.1 40S ribosomal protein S9-2, partial [Cucurbita argyrosperma subsp. sororia] >KAA0039283.1 40S ribosomal protein S9-2-like [Cucumis melo var. makuwa] >KAG6601424.1 40S ribosomal protein S9-2, partial [Cucurbita argyrosperma subsp. sororia] >KGN51904.1 hypothetical protein Csa_008331 [Cucumis sativus])

HSP 1 Score: 383.6 bits (984), Expect = 9.9e-103
Identity = 195/197 (98.98%), Postives = 197/197 (100.00%), Query Frame = 0 

Query: 1   MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM 60
           MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM
Sbjct: 1   MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM 60

Query: 61  LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQSKLDYVLALTVENFLERRLQTLVFKSGM 120
           LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQ+KLDYVLALTVENFLERRLQTLVFKSGM
Sbjct: 61  LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 120

Query: 121 AKSIHHARVLIRQKHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRRNQK 180
           AKSIHHARVLIRQKHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKR+NQK
Sbjct: 121 AKSIHHARVLIRQKHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRKNQK 180

Query: 181 AAAKKAAGGDGDEEDED 198
           AAAKKAAGGDGDEEDED
Sbjct: 181 AAAKKAAGGDGDEEDED 197

[Close]
BLAST of CmoCh01G009000 vs. NCBI nr
Match: XP_024018555.1 (40S ribosomal protein S9-2 [Morus notabilis] >PON71929.1 Ribosomal protein [Parasponia andersonii] >PON83707.1 Ribosomal protein [Trema orientale])

HSP 1 Score: 383.6 bits (984), Expect = 9.9e-103
Identity = 195/197 (98.98%), Postives = 197/197 (100.00%), Query Frame = 0 

Query: 1   MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM 60
           MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM
Sbjct: 1   MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM 60

Query: 61  LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQSKLDYVLALTVENFLERRLQTLVFKSGM 120
           LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQ+KLDYVLALTVENFLERRLQTLVFKSGM
Sbjct: 61  LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 120

Query: 121 AKSIHHARVLIRQKHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRRNQK 180
           AKSIHHARVLIRQ+HIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRRNQK
Sbjct: 121 AKSIHHARVLIRQRHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRRNQK 180

Query: 181 AAAKKAAGGDGDEEDED 198
           AAAKKAAGGDGDEEDED
Sbjct: 181 AAAKKAAGGDGDEEDED 197

[Close]
BLAST of CmoCh01G009000 vs. NCBI nr
Match: XP_022142910.1 (40S ribosomal protein S9-2 [Momordica charantia] >XP_022151237.1 40S ribosomal protein S9-2 [Momordica charantia] >XP_038893425.1 40S ribosomal protein S9-2 [Benincasa hispida])

HSP 1 Score: 382.5 bits (981), Expect = 2.2e-102
Identity = 194/197 (98.48%), Postives = 197/197 (100.00%), Query Frame = 0 

Query: 1   MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM 60
           MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM
Sbjct: 1   MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM 60

Query: 61  LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQSKLDYVLALTVENFLERRLQTLVFKSGM 120
           LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQ+KLDYVLALTVENFLERRLQTLVFKSGM
Sbjct: 61  LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 120

Query: 121 AKSIHHARVLIRQKHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRRNQK 180
           AKSIHHARVLIRQ+HIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKR+NQK
Sbjct: 121 AKSIHHARVLIRQRHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRKNQK 180

Query: 181 AAAKKAAGGDGDEEDED 198
           AAAKKAAGGDGDEEDED
Sbjct: 181 AAAKKAAGGDGDEEDED 197

[Close]
BLAST of CmoCh01G009000 vs. TAIR 10
Match: AT5G39850.1 (Ribosomal protein S4 )

HSP 1 Score: 359.0 bits (920), Expect = 2.4e-99
Identity = 179/197 (90.86%), Postives = 192/197 (97.46%), Query Frame = 0 

Query: 1   MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM 60
           MV+V FYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQY LSRIRN AR 
Sbjct: 1   MVNVRFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYTLSRIRNAARE 60

Query: 61  LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQSKLDYVLALTVENFLERRLQTLVFKSGM 120
           LLTLDEKNPRRIFEGEALLRRMNRYGLLDE+Q+KLDYVLALTVENFLERRLQT+VFKSGM
Sbjct: 61  LLTLDEKNPRRIFEGEALLRRMNRYGLLDETQNKLDYVLALTVENFLERRLQTIVFKSGM 120

Query: 121 AKSIHHARVLIRQKHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRRNQK 180
           AKSIHHARVLIRQ+HIRVGRQ+VNIPSFMVRV+SQKH+DFSLTSPFGGGRPGRVKRRN++
Sbjct: 121 AKSIHHARVLIRQRHIRVGRQLVNIPSFMVRVESQKHVDFSLTSPFGGGRPGRVKRRNER 180

Query: 181 AAAKKAAGGDGDEEDED 198
           A AKKA+GGDGDE+DE+
Sbjct: 181 AGAKKASGGDGDEDDEE 197

[Close]
BLAST of CmoCh01G009000 vs. TAIR 10
Match: AT5G15200.1 (Ribosomal protein S4 )

HSP 1 Score: 340.5 bits (872), Expect = 9.0e-94
Identity = 172/198 (86.87%), Postives = 190/198 (95.96%), Query Frame = 0 

Query: 1   MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM 60
           MVHV +YRNYGKTFK PRRPYEKERLD+ELKLVGEYGLR KRELWRVQY+LSRIRN AR 
Sbjct: 1   MVHVCYYRNYGKTFKGPRRPYEKERLDSELKLVGEYGLRNKRELWRVQYSLSRIRNAARD 60

Query: 61  LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQSKLDYVLALTVENFLERRLQTLVFKSGM 120
           LLTLDEK+PRRIFEGEALLRRMNRYGLLDESQ+KLDYVLALTVENFLERRLQT+VFKSGM
Sbjct: 61  LLTLDEKSPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTIVFKSGM 120

Query: 121 AKSIHHARVLIRQKHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRRNQK 180
           AKSIHH+RVLIRQ+HIRVG+Q+VNIPSFMVR+DSQKHIDF+LTSPFGGGRPGRVKRRN+K
Sbjct: 121 AKSIHHSRVLIRQRHIRVGKQLVNIPSFMVRLDSQKHIDFALTSPFGGGRPGRVKRRNEK 180

Query: 181 AAAKKAAGG---DGDEED 196
           +A+KKA+GG   DGD+E+
Sbjct: 181 SASKKASGGGDADGDDEE 198

[Close]
BLAST of CmoCh01G009000 vs. TAIR 10
Match: AT5G15200.2 (Ribosomal protein S4 )

HSP 1 Score: 247.3 bits (630), Expect = 1.0e-65
Identity = 124/137 (90.51%), Postives = 132/137 (96.35%), Query Frame = 0 

Query: 1   MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM 60
           MVHV +YRNYGKTFK PRRPYEKERLD+ELKLVGEYGLR KRELWRVQY+LSRIRN AR 
Sbjct: 1   MVHVCYYRNYGKTFKGPRRPYEKERLDSELKLVGEYGLRNKRELWRVQYSLSRIRNAARD 60

Query: 61  LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQSKLDYVLALTVENFLERRLQTLVFKSGM 120
           LLTLDEK+PRRIFEGEALLRRMNRYGLLDESQ+KLDYVLALTVENFLERRLQT+VFKSGM
Sbjct: 61  LLTLDEKSPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTIVFKSGM 120

Query: 121 AKSIHHARVLIRQKHIR 138
           AKSIHH+RVLIRQ+HIR
Sbjct: 121 AKSIHHSRVLIRQRHIR 137

[Close]
BLAST of CmoCh01G009000 vs. TAIR 10
Match: AT5G15750.1 (Alpha-L RNA-binding motif/Ribosomal protein S4 family protein )

HSP 1 Score: 42.7 bits (99), Expect = 3.9e-04
Identity = 30/130 (23.08%), Postives = 61/130 (46.92%), Query Frame = 0 

Query: 21  YEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARMLLTLDEKNPRRIFEGEALLR 80
           +++E    E ++   Y +  + +  +       ++    ++  +D  +P RI   + LL 
Sbjct: 20  WKREGNHRENEITYRYHMGSRDDYKKYSGLCRMVQKLTNIMKQMDPADPFRIQMTDMLLE 79

Query: 81  RMNRYGLLDESQSKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLIRQKHIRVGR 140
           ++   G++   +S L     L+V +F  RRL T++     A+    A   I Q H+RVG 
Sbjct: 80  KLYNMGVIPTRKS-LTLTERLSVSSFCRRRLSTVLVHLKFAEHHKEAVTYIEQGHVRVGP 139

Query: 141 QVVNIPSFMV 151
           + +  P+F+V
Sbjct: 140 ETITDPAFLV 148

The following BLAST results are available for this feature:
BLAST of CmoCh01G009000 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9FLF03.4e-9890.8640S ribosomal protein S9-2 OS=Arabidopsis thaliana OX=3702 GN=RPS9C PE=1 SV=1[more]
Q9LXG11.3e-9286.8740S ribosomal protein S9-1 OS=Arabidopsis thaliana OX=3702 GN=RPS9B PE=1 SV=1[more]
P528101.0e-7072.7740S ribosomal protein S9 OS=Podospora anserina OX=2587412 GN=RPS9 PE=3 SV=1[more]
A6QLG59.8e-6971.2040S ribosomal protein S9 OS=Bos taurus OX=9913 GN=RPS9 PE=2 SV=1[more]
P467819.8e-6971.2040S ribosomal protein S9 OS=Homo sapiens OX=9606 GN=RPS9 PE=1 SV=3[more]
BLAST of CmoCh01G009000 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1GBU29.7e-104100.0040S ribosomal protein S9-2-like OS=Cucurbita moschata OX=3662 GN=LOC111452742 PE... [more]
A0A6J1HZN12.2e-10399.4940S ribosomal protein S9-2 OS=Cucurbita maxima OX=3661 GN=LOC111467686 PE=3 SV=1[more]
A0A6J1FZI52.2e-10399.4940S ribosomal protein S9-2 OS=Cucurbita moschata OX=3662 GN=LOC111449338 PE=3 SV... [more]
A0A6J1JAT44.8e-10398.9840S ribosomal protein S9-2-like OS=Cucurbita maxima OX=3661 GN=LOC111485110 PE=3... [more]
A0A0A0KSN14.8e-10398.98S4 RNA-binding domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G604... [more]
BLAST of CmoCh01G009000 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022949366.12.0e-103100.0040S ribosomal protein S9-2-like [Cucurbita moschata][more]
XP_022944955.14.5e-10399.4940S ribosomal protein S9-2 [Cucurbita moschata] >XP_022968439.1 40S ribosomal pr... [more]
XP_004135180.19.9e-10398.9840S ribosomal protein S9-2 [Cucumis sativus] >XP_004141548.1 40S ribosomal prote... [more]
XP_024018555.19.9e-10398.9840S ribosomal protein S9-2 [Morus notabilis] >PON71929.1 Ribosomal protein [Para... [more]
XP_022142910.12.2e-10298.4840S ribosomal protein S9-2 [Momordica charantia] >XP_022151237.1 40S ribosomal p... [more]
BLAST of CmoCh01G009000 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G39850.12.4e-9990.86Ribosomal protein S4 [more]
AT5G15200.19.0e-9486.87Ribosomal protein S4 [more]
AT5G15200.21.0e-6590.51Ribosomal protein S4 [more]
AT5G15750.13.9e-0423.08Alpha-L RNA-binding motif/Ribosomal protein S4 family protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002942RNA-binding S4 domainSMARTSM00363s4_6coord: 109..180
e-value: 2.5E-5
score: 33.7
IPR002942RNA-binding S4 domainPFAMPF01479S4coord: 109..152
e-value: 3.4E-13
score: 49.1
IPR002942RNA-binding S4 domainCDDcd00165S4coord: 109..153
e-value: 4.60456E-9
score: 49.1702
IPR001912Ribosomal protein S4/S9, N-terminalSMARTSM01390Ribosomal_S4_2coord: 8..108
e-value: 6.5E-25
score: 98.8
IPR001912Ribosomal protein S4/S9, N-terminalPFAMPF00163Ribosomal_S4coord: 15..64
e-value: 1.4E-6
score: 29.0
IPR036986RNA-binding S4 domain superfamilyGENE3D3.10.290.10coord: 108..165
e-value: 2.1E-14
score: 55.5
IPR005710Ribosomal protein S4/S9, eukaryotic/archaealTIGRFAMTIGR01018TIGR01018coord: 11..166
e-value: 1.6E-64
score: 214.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 163..197
NoneNo IPR availablePANTHERPTHR11831:SF3440S RIBOSOMAL PROTEIN S9-2-LIKEcoord: 5..197
NoneNo IPR availablePROSITEPS50889S4coord: 109..180
score: 11.092493
NoneNo IPR availableSUPERFAMILY55174Alpha-L RNA-binding motifcoord: 12..159
IPR022801Ribosomal protein S4/S9PANTHERPTHR1183130S 40S RIBOSOMAL PROTEINcoord: 5..197
IPR018079Ribosomal protein S4, conserved sitePROSITEPS00632RIBOSOMAL_S4coord: 107..131

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh01G009000.1CmoCh01G009000.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0045903 positive regulation of translational fidelity
biological_process GO:0006412 translation
cellular_component GO:0022627 cytosolic small ribosomal subunit
cellular_component GO:0015935 small ribosomal subunit
molecular_function GO:0019843 rRNA binding
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0003723 RNA binding