CmoCh01G008420 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh01G008420
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Unknown protein
Location	Cmo_Chr01: 4486479 .. 4488337 (-)
RNA-Seq Expression	CmoCh01G008420
Synteny	CmoCh01G008420

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGACATCGACATTTAGGGCACCAAAAAGCCTAATTTTTCTAATGGGAATTTCGAATTCGTAATTTTGTTCTATCGGATAGAATCGATCAATAATCTTCAAGGGCAATTACAAGTTCAAACATCCAAGGAAACACGACTCGGTTCCTTCCTGTTGCATGAACGCATCCCAAGGCGTTTTCTTTGGATCTCTCAAGCTCAAATTACTCTCCATTTTTTGTTCGTTGCAATTCTTTATGTTGAAAAGGGAATTGGGTCGGCAGGTAAATGGCAGGTCATGAAGCCAGATCGGTTTTCGACTGGGAAAACTTCCATTCGTTGAATTCATATCAGTCGTCTTCTTCATCTCAGCAGCCGAAAATCCAACTGAAAGAATGGTCAATGGTGGGGATTAGGGATTCTCTTCCCAAAGACGATTTCTCCGTCTTCCCACCTTCAAATCACGAGAATCTATGGCTACCATCGATTGAAGGAAACGAACGAGGAAGCCCAGTTTCATTTCAGTCCAATTCGCCATCCTCATCGTTTAGGTCGTCCCAATCATCTTCCTCGTTCTCATCTTTCTCACTTTCTGATGATGAGACTTCACATCCACAGTCACCGAGCCCATCTGATTGTCAAATTCGGAAGTCCATGGCGGCTTCTAAATGGATGGCTTTCGGGGTTCAGATTCTTCGCTCCCGGATTGCTGCAATGACTTCCTCAATTTGGCCCAATGCTGCGCGTAGAACGGCTGTTTGGTTGTTTTCCCCTGCTGGAAGGATTGGGTTATTGGTAACCCTCTGGTGGCTTTACAAGAGACTTCGTCAGCGCCGTTTGCGTCATAGTACAGAACAATTAAAGATGATGATCAAGGAGAAAGACAAGGTTTGTCAATTTCTGACCTCCAAGTGTTTGTGACAATGCTTGTAAGAGTTTTGACGCCCCCTGTATTCTGCAAAATGGGTATTAGAGAATATAATAGCTCTTTTCATAATACAACATTGCGTTACCAACTTACAAAATAACATGATATTGAATCTGGGTGTTTGAATTTGAAGTAAACCAAGTCATGACTGCATGTGGGGGGTTATCAGAAGTAGTTTAGTTCTTGTCTTTCTTGGCATGACCTTATTCCCTTCTACATTATGCTGCTCCTCTCCACTGTCTAATTAAAAATCTTGGTTTCTTTAGTTGAAGAATGAGCTCAAGAGCTATTGTCTTGCATTTGTCTGATAGATTCTGGGGTTTTTTAAAATTTTTTTATCCAGAAAATCAGCCAACTACTGCAACAAGTTGCACAATTGAATAGATCAATGTTATTAGCCCAACAGAAAGTACTGCCATCAAATTAGAAAATGTGTCAAGGTAGCCATGTTTAGCGTCTATACCAGAGATGAGGCGGCAATAAGTATTGCAGCTATTCTGAATATCTTGCTCGTTGAAGAAGTTTAGGCTTGAATTCTTGTTCAGATTCATAGAAGGAATCCAGTAGCAGTAGAATCGAACTGACACAGAAGCTCATGCCTTTGCCAGGGGAAGAGTATAAGGCAGGCACCATGTATGTCTCAAAACGACATGAATCTGTTTGTGGCTGCACAAAAACAGATGATCAGCTCAGAGATGCAATGTATACACAGATGATTTGTATTGATTTTTTCAGTATTTGTTCCAAGAAATATATATATTAGATTAGGATTTTCTTGTAATGTCTTTGCCAACTTCGTTTATTGACTGGGAAGCTTATGCTTATGCACAGTGTATTGGGGTTTGTAAATCGATATGATTTGCTTGCAATGTTAAACCATAAAACTATGCACTTCCTGCAGAGCATGCTTTCCAATAGAAACTGACAAGCACAGAATCATATTCCTACTTCCTTT

mRNA sequence

GGACATCGACATTTAGGGCACCAAAAAGCCTAATTTTTCTAATGGGAATTTCGAATTCGTAATTTTGTTCTATCGGATAGAATCGATCAATAATCTTCAAGGGCAATTACAAGTTCAAACATCCAAGGAAACACGACTCGGTTCCTTCCTGTTGCATGAACGCATCCCAAGGCGTTTTCTTTGGATCTCTCAAGCTCAAATTACTCTCCATTTTTTGTTCGTTGCAATTCTTTATGTTGAAAAGGGAATTGGGTCGGCAGGTAAATGGCAGGTCATGAAGCCAGATCGGTTTTCGACTGGGAAAACTTCCATTCGTTGAATTCATATCAGTCGTCTTCTTCATCTCAGCAGCCGAAAATCCAACTGAAAGAATGGTCAATGGTGGGGATTAGGGATTCTCTTCCCAAAGACGATTTCTCCGTCTTCCCACCTTCAAATCACGAGAATCTATGGCTACCATCGATTGAAGGAAACGAACGAGGAAGCCCAGTTTCATTTCAGTCCAATTCGCCATCCTCATCGTTTAGGTCGTCCCAATCATCTTCCTCGTTCTCATCTTTCTCACTTTCTGATGATGAGACTTCACATCCACAGTCACCGAGCCCATCTGATTGTCAAATTCGGAAGTCCATGGCGGCTTCTAAATGGATGGCTTTCGGGGTTCAGATTCTTCGCTCCCGGATTGCTGCAATGACTTCCTCAATTTGGCCCAATGCTGCGCGTAGAACGGCTGTTTGGTTGTTTTCCCCTGCTGGAAGGATTGGGTTATTGGTAACCCTCTGGTGGCTTTACAAGAGACTTCGTCAGCGCCGTTTGCGTCATAGTACAGAACAATTAAAGATGATGATCAAGGAGAAAGACAAGAAAATCAGCCAACTACTGCAACAAGTTGCACAATTGAATAGATCAATGTTATTAGCCCAACAGAAAGTACTGCCATCAAATTAGAAAATGTGTCAAGGTAGCCATGTTTAGCGTCTATACCAGAGATGAGGCGGCAATAAGTATTGCAGCTATTCTGAATATCTTGCTCGTTGAAGAAGTTTAGGCTTGAATTCTTGTTCAGATTCATAGAAGGAATCCAGTAGCAGTAGAATCGAACTGACACAGAAGCTCATGCCTTTGCCAGGGGAAGAGTATAAGGCAGGCACCATGTATGTCTCAAAACGACATGAATCTGTTTGTGGCTGCACAAAAACAGATGATCAGCTCAGAGATGCAATGTATACACAGATGATTTGTATTGATTTTTTCAGTATTTGTTCCAAGAAATATATATATTAGATTAGGATTTTCTTGTAATGTCTTTGCCAACTTCGTTTATTGACTGGGAAGCTTATGCTTATGCACAGTGTATTGGGGTTTGTAAATCGATATGATTTGCTTGCAATGTTAAACCATAAAACTATGCACTTCCTGCAGAGCATGCTTTCCAATAGAAACTGACAAGCACAGAATCATATTCCTACTTCCTTT

Coding sequence (CDS)

ATGGCAGGTCATGAAGCCAGATCGGTTTTCGACTGGGAAAACTTCCATTCGTTGAATTCATATCAGTCGTCTTCTTCATCTCAGCAGCCGAAAATCCAACTGAAAGAATGGTCAATGGTGGGGATTAGGGATTCTCTTCCCAAAGACGATTTCTCCGTCTTCCCACCTTCAAATCACGAGAATCTATGGCTACCATCGATTGAAGGAAACGAACGAGGAAGCCCAGTTTCATTTCAGTCCAATTCGCCATCCTCATCGTTTAGGTCGTCCCAATCATCTTCCTCGTTCTCATCTTTCTCACTTTCTGATGATGAGACTTCACATCCACAGTCACCGAGCCCATCTGATTGTCAAATTCGGAAGTCCATGGCGGCTTCTAAATGGATGGCTTTCGGGGTTCAGATTCTTCGCTCCCGGATTGCTGCAATGACTTCCTCAATTTGGCCCAATGCTGCGCGTAGAACGGCTGTTTGGTTGTTTTCCCCTGCTGGAAGGATTGGGTTATTGGTAACCCTCTGGTGGCTTTACAAGAGACTTCGTCAGCGCCGTTTGCGTCATAGTACAGAACAATTAAAGATGATGATCAAGGAGAAAGACAAGAAAATCAGCCAACTACTGCAACAAGTTGCACAATTGAATAGATCAATGTTATTAGCCCAACAGAAAGTACTGCCATCAAATTAG

Protein sequence

MAGHEARSVFDWENFHSLNSYQSSSSSQQPKIQLKEWSMVGIRDSLPKDDFSVFPPSNHENLWLPSIEGNERGSPVSFQSNSPSSSFRSSQSSSSFSSFSLSDDETSHPQSPSPSDCQIRKSMAASKWMAFGVQILRSRIAAMTSSIWPNAARRTAVWLFSPAGRIGLLVTLWWLYKRLRQRRLRHSTEQLKMMIKEKDKKISQLLQQVAQLNRSMLLAQQKVLPSN

Homology

[Close]

BLAST of CmoCh01G008420 vs. ExPASy TrEMBL
Match: A0A6J1GB64 (uncharacterized protein LOC111452392 OS=Cucurbita moschata OX=3662 GN=LOC111452392 PE=4 SV=1)

HSP 1 Score: 431.8 bits (1109), Expect = 1.8e-117
Identity = 227/227 (100.00%), Postives = 227/227 (100.00%), Query Frame = 0


Query: 1   MAGHEARSVFDWENFHSLNSYQSSSSSQQPKIQLKEWSMVGIRDSLPKDDFSVFPPSNHE 60
           MAGHEARSVFDWENFHSLNSYQSSSSSQQPKIQLKEWSMVGIRDSLPKDDFSVFPPSNHE
Sbjct: 1   MAGHEARSVFDWENFHSLNSYQSSSSSQQPKIQLKEWSMVGIRDSLPKDDFSVFPPSNHE 60

Query: 61  NLWLPSIEGNERGSPVSFQSNSPSSSFRSSQSSSSFSSFSLSDDETSHPQSPSPSDCQIR 120
           NLWLPSIEGNERGSPVSFQSNSPSSSFRSSQSSSSFSSFSLSDDETSHPQSPSPSDCQIR
Sbjct: 61  NLWLPSIEGNERGSPVSFQSNSPSSSFRSSQSSSSFSSFSLSDDETSHPQSPSPSDCQIR 120

Query: 121 KSMAASKWMAFGVQILRSRIAAMTSSIWPNAARRTAVWLFSPAGRIGLLVTLWWLYKRLR 180
           KSMAASKWMAFGVQILRSRIAAMTSSIWPNAARRTAVWLFSPAGRIGLLVTLWWLYKRLR
Sbjct: 121 KSMAASKWMAFGVQILRSRIAAMTSSIWPNAARRTAVWLFSPAGRIGLLVTLWWLYKRLR 180

Query: 181 QRRLRHSTEQLKMMIKEKDKKISQLLQQVAQLNRSMLLAQQKVLPSN 228
           QRRLRHSTEQLKMMIKEKDKKISQLLQQVAQLNRSMLLAQQKVLPSN
Sbjct: 181 QRRLRHSTEQLKMMIKEKDKKISQLLQQVAQLNRSMLLAQQKVLPSN 227

[Close]

BLAST of CmoCh01G008420 vs. ExPASy TrEMBL
Match: A0A6J1K6L4 (uncharacterized protein LOC111492777 OS=Cucurbita maxima OX=3661 GN=LOC111492777 PE=4 SV=1)

HSP 1 Score: 415.6 bits (1067), Expect = 1.3e-112
Identity = 221/230 (96.09%), Postives = 225/230 (97.83%), Query Frame = 0


Query: 1   MAGHEARSVFDWENFHSLN---SYQSSSSSQQPKIQLKEWSMVGIRDSLPKDDFSVFPPS 60
           +AGHEARSVFDWENFHSLN   SYQSSSSSQQPKIQLKEWSMVGIRDSLPKDDFSVFPPS
Sbjct: 32  LAGHEARSVFDWENFHSLNSYHSYQSSSSSQQPKIQLKEWSMVGIRDSLPKDDFSVFPPS 91

Query: 61  NHENLWLPSIEGNERGSPVSFQSNSPSSSFRSSQSSSSFSSFSLSDDETSHPQSPSPSDC 120
           NHENLWLPSIEGNERGSPVSFQSNSPSSSFRSSQSSSSFSSFSLSDDETSHPQSPSPSD 
Sbjct: 92  NHENLWLPSIEGNERGSPVSFQSNSPSSSFRSSQSSSSFSSFSLSDDETSHPQSPSPSDS 151

Query: 121 QIRKSMAASKWMAFGVQILRSRIAAMTSSIWPNAARRTAVWLFSPAGRIGLLVTLWWLYK 180
           QIRKSMAAS+WMAFGVQILRSRIAAMTS+IWPNAARRTAVWLFSPAGRIGLL+TLWWLYK
Sbjct: 152 QIRKSMAASRWMAFGVQILRSRIAAMTSTIWPNAARRTAVWLFSPAGRIGLLLTLWWLYK 211

Query: 181 RLRQRRLRHSTEQLKMMIKEKDKKISQLLQQVAQLNRSMLLAQQKVLPSN 228
           RLRQRRLRHSTEQLKMMIKEKDKKISQLLQQVAQLNRSML AQQKVLPSN
Sbjct: 212 RLRQRRLRHSTEQLKMMIKEKDKKISQLLQQVAQLNRSMLSAQQKVLPSN 261

[Close]

BLAST of CmoCh01G008420 vs. ExPASy TrEMBL
Match: A0A6J1C560 (uncharacterized protein LOC111008581 OS=Momordica charantia OX=3673 GN=LOC111008581 PE=4 SV=1)

HSP 1 Score: 325.5 bits (833), Expect = 1.8e-85
Identity = 178/227 (78.41%), Postives = 195/227 (85.90%), Query Frame = 0


Query: 1   MAGHEARSVFDWENFHSLNSYQSSSSSQQPKIQLKEWSMVGIRDSLPKDDFSVFPPSNHE 60
           MAG E RSVFDWENF S NS  S S+S+  KI+LKEWSMV I DS P +DFSVFPPSNHE
Sbjct: 1   MAGDETRSVFDWENFPSSNSSVSPSASRLRKIELKEWSMVVITDSRPNNDFSVFPPSNHE 60

Query: 61  NLWLPSIEGNERGSPVSFQSNSPSSSFRSSQSSSSFSSFSLSDDETSHPQSPSPSDCQIR 120
           NL  PS E +ERGSPVSFQS+SPS+SFRSSQSSSSFSSFS SDDETSH  SP PSDCQIR
Sbjct: 61  NLHCPSNEEDERGSPVSFQSSSPSTSFRSSQSSSSFSSFSFSDDETSHSHSPKPSDCQIR 120

Query: 121 KSMAASKWMAFGVQILRSRIAAMTSSIWPNAARRTAVWLFSPAGRIGLLVTLWWLYKRLR 180
           KSMAAS+WM +GVQILR+RI AM S+IW N ARRTA W+FSPAGRI L+VTLWWLYKR R
Sbjct: 121 KSMAASRWMVYGVQILRARITAMASTIWSNTARRTAFWVFSPAGRIALVVTLWWLYKRAR 180

Query: 181 QRRLRHSTEQLKMMIKEKDKKISQLLQQVAQLNRSMLLAQQKVLPSN 228
           QRRLR S+EQL+M+IKEKDKKISQLLQQVAQLN  +LLAQQKVLPSN
Sbjct: 181 QRRLRQSSEQLRMIIKEKDKKISQLLQQVAQLN-GLLLAQQKVLPSN 226

[Close]

BLAST of CmoCh01G008420 vs. ExPASy TrEMBL
Match: A0A1S3BA65 (uncharacterized protein LOC103487835 OS=Cucumis melo OX=3656 GN=LOC103487835 PE=4 SV=1)

HSP 1 Score: 282.7 bits (722), Expect = 1.3e-72
Identity = 164/227 (72.25%), Postives = 177/227 (77.97%), Query Frame = 0


Query: 1   MAGHEARSVFDWENFHSLNSYQSSSSSQQPKIQLKEWSMVGIRDSLPKDDFSVFPPSNHE 60
           MA  E+RSVFDW N    NSYQSS             SMV IRDS PKDDFSVFPPS HE
Sbjct: 50  MADDESRSVFDWGNSPPFNSYQSS-------------SMVVIRDSPPKDDFSVFPPSKHE 109

Query: 61  NLWLPSIEGNERGSPVSFQSNSPSSSFRSSQSSSSFSSFSLSDDETSHPQSPSPSDCQIR 120
           NL  PSI  +ERGSPVSFQSNSPSSSFRSSQSSSSFSSFS SDDE SHP SP PS  QI+
Sbjct: 110 NLQPPSIGEDERGSPVSFQSNSPSSSFRSSQSSSSFSSFSFSDDEASHPHSPKPSGSQIQ 169

Query: 121 KSMAASKWMAFGVQILRSRIAAMTSSIWPNAARRTAVWLFSPAGRIGLLVTLWWLYKRLR 180
           K M  S+W+ +GVQILR RI AM S+IW NA    A WLFSPAGRIGLLVTL WLYKR R
Sbjct: 170 KPMVTSRWLLWGVQILRLRITAMASTIWSNA----AFWLFSPAGRIGLLVTLLWLYKRAR 229

Query: 181 QRRLRHSTEQLKMMIKEKDKKISQLLQQVAQLNRSMLLAQQKVLPSN 228
           +RRLR ST QLKMM+KEKD+KISQL+QQVAQLNRS++LAQQKVLPSN
Sbjct: 230 KRRLRRSTNQLKMMMKEKDEKISQLMQQVAQLNRSLILAQQKVLPSN 259

[Close]

BLAST of CmoCh01G008420 vs. ExPASy TrEMBL
Match: A0A0A0LVK1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G038390 PE=4 SV=1)

HSP 1 Score: 276.9 bits (707), Expect = 7.3e-71
Identity = 160/227 (70.48%), Postives = 176/227 (77.53%), Query Frame = 0


Query: 1   MAGHEARSVFDWENFHSLNSYQSSSSSQQPKIQLKEWSMVGIRDSLPKDDFSVFPPSNHE 60
           MAG E+RSVFDW +F    S+ SS             SMV IRDS PKDDFSVFPPS HE
Sbjct: 1   MAGDESRSVFDWGDFPPFTSHHSS-------------SMVVIRDSPPKDDFSVFPPSKHE 60

Query: 61  NLWLPSIEGNERGSPVSFQSNSPSSSFRSSQSSSSFSSFSLSDDETSHPQSPSPSDCQIR 120
           NL  PS++ +ER S VSFQSNSPSSSFRSS SSSSFSSFS SDDE SHP SP PSD QI+
Sbjct: 61  NLQPPSLQEDERESSVSFQSNSPSSSFRSSHSSSSFSSFSFSDDEASHPHSPKPSDSQIQ 120

Query: 121 KSMAASKWMAFGVQILRSRIAAMTSSIWPNAARRTAVWLFSPAGRIGLLVTLWWLYKRLR 180
           K M AS+W+  GVQILR RI AM S+IW NA    A WLFSPAGRIGLLVTL WLYKR R
Sbjct: 121 KPMVASRWLLLGVQILRPRITAMASTIWSNA----AFWLFSPAGRIGLLVTLLWLYKRAR 180

Query: 181 QRRLRHSTEQLKMMIKEKDKKISQLLQQVAQLNRSMLLAQQKVLPSN 228
           +RRLR S+EQLKMMIKEKD+KIS L+QQVAQLNRS++LAQQKVLPSN
Sbjct: 181 KRRLRRSSEQLKMMIKEKDEKISHLMQQVAQLNRSLILAQQKVLPSN 210

[Close]

BLAST of CmoCh01G008420 vs. NCBI nr
Match: XP_022948859.1 (uncharacterized protein LOC111452392 [Cucurbita moschata])

HSP 1 Score: 431.8 bits (1109), Expect = 3.7e-117
Identity = 227/227 (100.00%), Postives = 227/227 (100.00%), Query Frame = 0


Query: 1   MAGHEARSVFDWENFHSLNSYQSSSSSQQPKIQLKEWSMVGIRDSLPKDDFSVFPPSNHE 60
           MAGHEARSVFDWENFHSLNSYQSSSSSQQPKIQLKEWSMVGIRDSLPKDDFSVFPPSNHE
Sbjct: 1   MAGHEARSVFDWENFHSLNSYQSSSSSQQPKIQLKEWSMVGIRDSLPKDDFSVFPPSNHE 60

Query: 61  NLWLPSIEGNERGSPVSFQSNSPSSSFRSSQSSSSFSSFSLSDDETSHPQSPSPSDCQIR 120
           NLWLPSIEGNERGSPVSFQSNSPSSSFRSSQSSSSFSSFSLSDDETSHPQSPSPSDCQIR
Sbjct: 61  NLWLPSIEGNERGSPVSFQSNSPSSSFRSSQSSSSFSSFSLSDDETSHPQSPSPSDCQIR 120

Query: 121 KSMAASKWMAFGVQILRSRIAAMTSSIWPNAARRTAVWLFSPAGRIGLLVTLWWLYKRLR 180
           KSMAASKWMAFGVQILRSRIAAMTSSIWPNAARRTAVWLFSPAGRIGLLVTLWWLYKRLR
Sbjct: 121 KSMAASKWMAFGVQILRSRIAAMTSSIWPNAARRTAVWLFSPAGRIGLLVTLWWLYKRLR 180

Query: 181 QRRLRHSTEQLKMMIKEKDKKISQLLQQVAQLNRSMLLAQQKVLPSN 228
           QRRLRHSTEQLKMMIKEKDKKISQLLQQVAQLNRSMLLAQQKVLPSN
Sbjct: 181 QRRLRHSTEQLKMMIKEKDKKISQLLQQVAQLNRSMLLAQQKVLPSN 227

[Close]

BLAST of CmoCh01G008420 vs. NCBI nr
Match: KAG6607465.1 (hypothetical protein SDJN03_00807, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 430.6 bits (1106), Expect = 8.2e-117
Identity = 226/227 (99.56%), Postives = 227/227 (100.00%), Query Frame = 0


Query: 1   MAGHEARSVFDWENFHSLNSYQSSSSSQQPKIQLKEWSMVGIRDSLPKDDFSVFPPSNHE 60
           MAGHEARSVFDWENFHSLNSYQSSSSSQQPKIQLKEWSMVGIRDSLPKDDFSVFPPSNHE
Sbjct: 1   MAGHEARSVFDWENFHSLNSYQSSSSSQQPKIQLKEWSMVGIRDSLPKDDFSVFPPSNHE 60

Query: 61  NLWLPSIEGNERGSPVSFQSNSPSSSFRSSQSSSSFSSFSLSDDETSHPQSPSPSDCQIR 120
           NLWLPSIEGNERGSPVSFQSNSPSSSFRSSQSSSSFSSFSLSDDETSHPQSPSPSDCQIR
Sbjct: 61  NLWLPSIEGNERGSPVSFQSNSPSSSFRSSQSSSSFSSFSLSDDETSHPQSPSPSDCQIR 120

Query: 121 KSMAASKWMAFGVQILRSRIAAMTSSIWPNAARRTAVWLFSPAGRIGLLVTLWWLYKRLR 180
           KSMAAS+WMAFGVQILRSRIAAMTSSIWPNAARRTAVWLFSPAGRIGLLVTLWWLYKRLR
Sbjct: 121 KSMAASRWMAFGVQILRSRIAAMTSSIWPNAARRTAVWLFSPAGRIGLLVTLWWLYKRLR 180

Query: 181 QRRLRHSTEQLKMMIKEKDKKISQLLQQVAQLNRSMLLAQQKVLPSN 228
           QRRLRHSTEQLKMMIKEKDKKISQLLQQVAQLNRSMLLAQQKVLPSN
Sbjct: 181 QRRLRHSTEQLKMMIKEKDKKISQLLQQVAQLNRSMLLAQQKVLPSN 227

[Close]

BLAST of CmoCh01G008420 vs. NCBI nr
Match: XP_023524923.1 (uncharacterized protein LOC111788705 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 425.2 bits (1092), Expect = 3.4e-115
Identity = 223/227 (98.24%), Postives = 226/227 (99.56%), Query Frame = 0


Query: 1   MAGHEARSVFDWENFHSLNSYQSSSSSQQPKIQLKEWSMVGIRDSLPKDDFSVFPPSNHE 60
           MAGHEARSVFDWENF SLNSYQSSSSSQQPKIQLKEWSMVGIRDSLPKDDFSVFPPSNHE
Sbjct: 1   MAGHEARSVFDWENFRSLNSYQSSSSSQQPKIQLKEWSMVGIRDSLPKDDFSVFPPSNHE 60

Query: 61  NLWLPSIEGNERGSPVSFQSNSPSSSFRSSQSSSSFSSFSLSDDETSHPQSPSPSDCQIR 120
           NLWLPSIEGNERGSPVSFQSNSPSSSFRSSQSSSSFSSFSLSDDETSHPQSPSPSDCQIR
Sbjct: 61  NLWLPSIEGNERGSPVSFQSNSPSSSFRSSQSSSSFSSFSLSDDETSHPQSPSPSDCQIR 120

Query: 121 KSMAASKWMAFGVQILRSRIAAMTSSIWPNAARRTAVWLFSPAGRIGLLVTLWWLYKRLR 180
           KSMAAS+WMAFGVQILRSRIAAMTS+IWPNAARRTAVWLFSPAGRIGLL+TLWWLYKRLR
Sbjct: 121 KSMAASRWMAFGVQILRSRIAAMTSTIWPNAARRTAVWLFSPAGRIGLLLTLWWLYKRLR 180

Query: 181 QRRLRHSTEQLKMMIKEKDKKISQLLQQVAQLNRSMLLAQQKVLPSN 228
           QRRLRHSTEQLKMMIKEKDKKISQLLQQVAQLNRSMLLAQQKVLPSN
Sbjct: 181 QRRLRHSTEQLKMMIKEKDKKISQLLQQVAQLNRSMLLAQQKVLPSN 227

[Close]

BLAST of CmoCh01G008420 vs. NCBI nr
Match: KAG7037120.1 (hypothetical protein SDJN02_00741 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 415.6 bits (1067), Expect = 2.7e-112
Identity = 217/225 (96.44%), Postives = 222/225 (98.67%), Query Frame = 0


Query: 1   MAGHEARSVFDWENFHSLNSYQSSSSSQQPKIQLKEWSMVGIRDSLPKDDFSVFPPSNHE 60
           MAGHEARSVFDWENFHSLNSYQSSSSSQQPKIQLKEWSMVGIRDSLPKDDFSVFPPSNHE
Sbjct: 1   MAGHEARSVFDWENFHSLNSYQSSSSSQQPKIQLKEWSMVGIRDSLPKDDFSVFPPSNHE 60

Query: 61  NLWLPSIEGNERGSPVSFQSNSPSSSFRSSQSSSSFSSFSLSDDETSHPQSPSPSDCQIR 120
           NLWLPSIEGNERGSPVSFQSNSPSSSFRSSQSSSSFSSFSLSDDETSHPQSPSPSDCQIR
Sbjct: 61  NLWLPSIEGNERGSPVSFQSNSPSSSFRSSQSSSSFSSFSLSDDETSHPQSPSPSDCQIR 120

Query: 121 KSMAASKWMAFGVQILRSRIAAMTSSIWPNAARRTAVWLFSPAGRIGLLVTLWWLYKRLR 180
           KSMAAS+WMAFGVQILRSRIAAMTSSIWPNAARRTAVWLFSPAGRIGLLVTLWWLYKRLR
Sbjct: 121 KSMAASRWMAFGVQILRSRIAAMTSSIWPNAARRTAVWLFSPAGRIGLLVTLWWLYKRLR 180

Query: 181 QRRLRHSTEQLKMMIKEKDKKISQLLQQVAQLNRSMLLAQQKVLP 226
           QRRLRHSTEQLKMMIKEKDKKISQLLQQVAQLNRS++   QK++P
Sbjct: 181 QRRLRHSTEQLKMMIKEKDKKISQLLQQVAQLNRSIIELTQKLMP 225

[Close]

BLAST of CmoCh01G008420 vs. NCBI nr
Match: XP_022997987.1 (uncharacterized protein LOC111492777 [Cucurbita maxima])

HSP 1 Score: 415.6 bits (1067), Expect = 2.7e-112
Identity = 221/230 (96.09%), Postives = 225/230 (97.83%), Query Frame = 0


Query: 1   MAGHEARSVFDWENFHSLN---SYQSSSSSQQPKIQLKEWSMVGIRDSLPKDDFSVFPPS 60
           +AGHEARSVFDWENFHSLN   SYQSSSSSQQPKIQLKEWSMVGIRDSLPKDDFSVFPPS
Sbjct: 32  LAGHEARSVFDWENFHSLNSYHSYQSSSSSQQPKIQLKEWSMVGIRDSLPKDDFSVFPPS 91

Query: 61  NHENLWLPSIEGNERGSPVSFQSNSPSSSFRSSQSSSSFSSFSLSDDETSHPQSPSPSDC 120
           NHENLWLPSIEGNERGSPVSFQSNSPSSSFRSSQSSSSFSSFSLSDDETSHPQSPSPSD 
Sbjct: 92  NHENLWLPSIEGNERGSPVSFQSNSPSSSFRSSQSSSSFSSFSLSDDETSHPQSPSPSDS 151

Query: 121 QIRKSMAASKWMAFGVQILRSRIAAMTSSIWPNAARRTAVWLFSPAGRIGLLVTLWWLYK 180
           QIRKSMAAS+WMAFGVQILRSRIAAMTS+IWPNAARRTAVWLFSPAGRIGLL+TLWWLYK
Sbjct: 152 QIRKSMAASRWMAFGVQILRSRIAAMTSTIWPNAARRTAVWLFSPAGRIGLLLTLWWLYK 211

Query: 181 RLRQRRLRHSTEQLKMMIKEKDKKISQLLQQVAQLNRSMLLAQQKVLPSN 228
           RLRQRRLRHSTEQLKMMIKEKDKKISQLLQQVAQLNRSML AQQKVLPSN
Sbjct: 212 RLRQRRLRHSTEQLKMMIKEKDKKISQLLQQVAQLNRSMLSAQQKVLPSN 261

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BLAST of CmoCh01G008420 vs. TAIR 10
Match: AT5G61360.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G07730.1); Has 20 Blast hits to 20 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 16; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). )

HSP 1 Score: 52.8 bits (125), Expect = 4.3e-07
Identity = 59/191 (30.89%), Postives = 91/191 (47.64%), Query Frame = 0


Query: 36  EWSMVGIRDS--LPKDDFSVFPPSNHENLWLPSIEGNERGSPVSFQSNSPS-SSFRSSQS 95
           ++ MV +R+S    KDD ++FPP NHENL++  +E     S  S  S+  S SSF  S S
Sbjct: 20  QFPMVFVRESTCFAKDDLAIFPPINHENLYVNGLESPSVSSSSSSSSSRLSDSSFSPSDS 79

Query: 96  SSSFSSFSLSDDETSHPQSPSPSDCQIRKSMAASKWMAFGVQILRSRIAAMTSSIWPNAA 155
              F     S  + S     SP    I   +    W     +IL +R+ +   ++     
Sbjct: 80  DEQFQFSRKSHSQPSEDVGKSPWKSVIEIDIIQGWW-----KILLARVMSNFQNL-VTCF 139

Query: 156 RRTAVWLFSPAGR--IGLLVTLWWLYKRLRQRRLRHSTE----QLKMMIKEKDKKISQLL 215
            R ++  FS   R    ++V   W +KR R RR     E     L+  IKE+D++I+QLL
Sbjct: 140 SRNSLCSFSKTLRSFYSVMVIFLWWWKRNRTRRRLEKGEIIAAHLRDTIKERDERIAQLL 199

Query: 216 QQVAQLNRSML 218
            Q+ Q+N  ++
Sbjct: 200 HQITQMNELLV 204

The following BLAST results are available for this feature:

BLAST of CmoCh01G008420 vs.


Match Name	E-value	Identity	Description

BLAST of CmoCh01G008420 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GB64	1.8e-117	100.00	uncharacterized protein LOC111452392 OS=Cucurbita moschata OX=3662 GN=LOC1114523...	[more]
A0A6J1K6L4	1.3e-112	96.09	uncharacterized protein LOC111492777 OS=Cucurbita maxima OX=3661 GN=LOC111492777...	[more]
A0A6J1C560	1.8e-85	78.41	uncharacterized protein LOC111008581 OS=Momordica charantia OX=3673 GN=LOC111008...	[more]
A0A1S3BA65	1.3e-72	72.25	uncharacterized protein LOC103487835 OS=Cucumis melo OX=3656 GN=LOC103487835 PE=...	[more]
A0A0A0LVK1	7.3e-71	70.48	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G038390 PE=4 SV=1	[more]

BLAST of CmoCh01G008420 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022948859.1	3.7e-117	100.00	uncharacterized protein LOC111452392 [Cucurbita moschata]	[more]
KAG6607465.1	8.2e-117	99.56	hypothetical protein SDJN03_00807, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023524923.1	3.4e-115	98.24	uncharacterized protein LOC111788705 [Cucurbita pepo subsp. pepo]	[more]
KAG7037120.1	2.7e-112	96.44	hypothetical protein SDJN02_00741 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022997987.1	2.7e-112	96.09	uncharacterized protein LOC111492777 [Cucurbita maxima]	[more]

BLAST of CmoCh01G008420 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G61360.1	4.3e-07	30.89	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 188..222
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 98..118
None	No IPR available	PANTHER	PTHR37206	TRANSMEMBRANE PROTEIN	coord: 1..227
None	No IPR available	PANTHER	PTHR37206:SF1	TRANSMEMBRANE PROTEIN	coord: 1..227

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh01G008420.1	CmoCh01G008420.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane