CmoCh01G007840 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh01G007840
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	CASP-like protein
Location	Cmo_Chr01: 4116108 .. 4117746 (-)
RNA-Seq Expression	CmoCh01G007840
Synteny	CmoCh01G007840

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTCGTATGGTGGTAGCGTTCATCGGGATTGGACTTCGAATCTTCGCCTTCATATGTCTCCTCATCGCCTTGGTCGTGATCGCCACCGACAAGCTGGTCCTCATTGAGGGCTCCGAATCAACCTTCAATGACATTCAAGGATACAGGTTCTCTATTCTGCCTACTTCTAATATCCATTCCAATTCACACCCTAAAATTTGTTCTTCTTCATGCAGGTATGTTTTGGCCGTGGCAATCATAGGGTTGGTACATACAATACTACAACTGGGTTTCTCTATTTACTATGCGGTTACCAAAAACATACCCTTTTGGAAGGGACTCCCTCAATTCAATTACTACACCGACCAGGTTTGTGTTGATTTCTTTATCGAGAATGTTGTTCTTTCAAACTTAACCTCAGCGTTACGGTGTTTCACATCAATTTTTTGTCCATCGAATTTTTAATCCAAAGTTAATCTTCAAAGCGTTTTTAAAAGATAAAATATCATCAATTTTGAAAGAATAAGGATATTTTTTAAACAAGAGGACGCTGGGTGTCACAATCGCACTCTTGATGGCAGTGGACTTGCGATTGTGCGGCACTCACTTTCCAATAACAAGTGAGTTAAGCCAATTCATTCTTACGTCGCCTACGGTCAAGCAACGTATGCTCGAGTCTTTGGCTTCAGTTTAAGAAGAAGTATATAAGTATTGGTAGGGAGACGTTCACAACTAGTCATGTCCCCTATCCCCTTGAGGCCTTTCATGTCCGGCAGGCCTAGACACAATTTTTCCGAAACGTCATACTCTTAGACATAATTTTTCCGAAACGTCATACTTCCTAGAAATATGAATGTAAAACACTAGAACATAGAAAGACATAAAGGGTTTGGCTTGTCATAGGCGCATGCGGCCATGGGCAATACGCCTTGGACGAGCATGACCGTGACACTGGGTTCCAAGGGGTGGATTGTGGGATCTCACCTCGTTGGAGAGGGGAACGAAACATCTCCTATAAATGTGTGGATATCTATCCCTAGTAGACGCGTTTTAAAACCGTAAGGCTGGCGACGATACGTATCCGCAATATCTACTTACGATCATTTATTTTAAAATCGAGAAACCAAATAGAAACAACTTAACCTAATTTGTTGAAAACTTGCTGATATCCAAATGGGGAAGGCAGGTGATAAGTTGGGTGTTGGCATCGGCGGCGGGGGCCGGCCTTGCGGTGTCGGCGGATCGTAAAATGTTACTGAATGAAGTTGTGGAGACCGGTATCGGCGATTGCGGAGTGTTGTTTGCAGCATTGGATCAGCAGAAGTGGTTGGTTGACGATTTCTTCGATAGGGCCAATATCGCCTCTGCCATTCTCTTCCTTGCTTTCCTCTCCATCGCCACTATCCTCCTCCTCTCCCCTTTCAATCGGATCGAACCTATTCCCACCACCCAAGATCTTGAGGCCCAATCTCCGCAGGCCCAAAATGGCAAGGCCCAATCTCCACAGGCCCAAACAGTCGAGGCCCAATCTCCACATGCCCACACAGTCGAGGCCCATTCTCCACAGGCCCAATCTCCACGGGCTCAACAGGTTGATGCCCATTCTCCACAGGCCCAAAAGGTCGAGGCCCAACCTACGGAGACCTCTTCCACTTGA

mRNA sequence

ATGGGTCGTATGGTGGTAGCGTTCATCGGGATTGGACTTCGAATCTTCGCCTTCATATGTCTCCTCATCGCCTTGGTCGTGATCGCCACCGACAAGCTGGTCCTCATTGAGGGCTCCGAATCAACCTTCAATGACATTCAAGGATACAGGTTCTCTATTCTGCCTACTTCTAATATCCATTCCAATTCACACCCTAAAATTTGTTCTTCTTCATGCAGGTATGTTTTGGCCGTGGCAATCATAGGGTTGGTACATACAATACTACAACTGGGTTTCTCTATTTACTATGCGGTTACCAAAAACATACCCTTTTGGAAGGGACTCCCTCAATTCAATTACTACACCGACCAGGTGATAAGTTGGGTGTTGGCATCGGCGGCGGGGGCCGGCCTTGCGGTGTCGGCGGATCGTAAAATGTTACTGAATGAAGTTGTGGAGACCGGTATCGGCGATTGCGGAGTGTTGTTTGCAGCATTGGATCAGCAGAAGTGGTTGGTTGACGATTTCTTCGATAGGGCCAATATCGCCTCTGCCATTCTCTTCCTTGCTTTCCTCTCCATCGCCACTATCCTCCTCCTCTCCCCTTTCAATCGGATCGAACCTATTCCCACCACCCAAGATCTTGAGGCCCAATCTCCGCAGGCCCAAAATGGCAAGGCCCAATCTCCACAGGCCCAAACAGTCGAGGCCCAATCTCCACATGCCCACACAGTCGAGGCCCATTCTCCACAGGCCCAATCTCCACGGGCTCAACAGGTTGATGCCCATTCTCCACAGGCCCAAAAGGTCGAGGCCCAACCTACGGAGACCTCTTCCACTTGA

Coding sequence (CDS)

ATGGGTCGTATGGTGGTAGCGTTCATCGGGATTGGACTTCGAATCTTCGCCTTCATATGTCTCCTCATCGCCTTGGTCGTGATCGCCACCGACAAGCTGGTCCTCATTGAGGGCTCCGAATCAACCTTCAATGACATTCAAGGATACAGGTTCTCTATTCTGCCTACTTCTAATATCCATTCCAATTCACACCCTAAAATTTGTTCTTCTTCATGCAGGTATGTTTTGGCCGTGGCAATCATAGGGTTGGTACATACAATACTACAACTGGGTTTCTCTATTTACTATGCGGTTACCAAAAACATACCCTTTTGGAAGGGACTCCCTCAATTCAATTACTACACCGACCAGGTGATAAGTTGGGTGTTGGCATCGGCGGCGGGGGCCGGCCTTGCGGTGTCGGCGGATCGTAAAATGTTACTGAATGAAGTTGTGGAGACCGGTATCGGCGATTGCGGAGTGTTGTTTGCAGCATTGGATCAGCAGAAGTGGTTGGTTGACGATTTCTTCGATAGGGCCAATATCGCCTCTGCCATTCTCTTCCTTGCTTTCCTCTCCATCGCCACTATCCTCCTCCTCTCCCCTTTCAATCGGATCGAACCTATTCCCACCACCCAAGATCTTGAGGCCCAATCTCCGCAGGCCCAAAATGGCAAGGCCCAATCTCCACAGGCCCAAACAGTCGAGGCCCAATCTCCACATGCCCACACAGTCGAGGCCCATTCTCCACAGGCCCAATCTCCACGGGCTCAACAGGTTGATGCCCATTCTCCACAGGCCCAAAAGGTCGAGGCCCAACCTACGGAGACCTCTTCCACTTGA

Protein sequence

MGRMVVAFIGIGLRIFAFICLLIALVVIATDKLVLIEGSESTFNDIQGYRFSILPTSNIHSNSHPKICSSSCRYVLAVAIIGLVHTILQLGFSIYYAVTKNIPFWKGLPQFNYYTDQVISWVLASAAGAGLAVSADRKMLLNEVVETGIGDCGVLFAALDQQKWLVDDFFDRANIASAILFLAFLSIATILLLSPFNRIEPIPTTQDLEAQSPQAQNGKAQSPQAQTVEAQSPHAHTVEAHSPQAQSPRAQQVDAHSPQAQKVEAQPTETSST

Homology

[Close]

BLAST of CmoCh01G007840 vs. ExPASy Swiss-Prot
Match: Q8GWD5 (CASP-like protein 4D1 OS=Arabidopsis thaliana OX=3702 GN=At2g39530 PE=2 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 9.2e-09
Identity = 57/186 (30.65%), Postives = 91/186 (48.92%), Query Frame = 0


Query: 13  LRIFAFICLLIALVVIATDKLVLIEGSES---TFNDIQGYRFSILPTSNIHSNSHPKICS 72
           LR+     LLI +V+I+T+ + L   S S    FND+  Y                    
Sbjct: 20  LRVLTAAFLLITVVLISTNTVTLEISSTSIKLPFNDVYAY-------------------- 79

Query: 73  SSCRYVLAVAIIGLVHTILQLGFSI-YYAVTKNIPFWKGLPQFNYYTDQVISWVLASAAG 132
              RY+L+ A+IGLV+ ++QL  +I  +A  K  P      QF++Y D+VIS++LA+ + 
Sbjct: 80  ---RYMLSAAVIGLVYAVVQLFLTISQFATGKTHPL---TYQFDFYGDKVISYLLATGSA 139

Query: 133 AGLAVSADRKMLLNEVVETGIGDCGVLFAALDQQKWLVDDFFDRANIASAILFLAFLSIA 192
           AG  VS D K     ++E         F + D     VD FF +   ++++L  AF+S+A
Sbjct: 140 AGFGVSKDLKDTYIALIE---------FDSTDP----VDKFFSKGYASASLLLFAFVSLA 166

Query: 193 TILLLS 195
            + + S
Sbjct: 200 VLSVFS 166

[Close]

BLAST of CmoCh01G007840 vs. ExPASy Swiss-Prot
Match: D7LD60 (CASP-like protein 4D1 OS=Arabidopsis lyrata subsp. lyrata OX=81972 GN=ARALYDRAFT_903205 PE=3 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 6.0e-08
Identity = 54/186 (29.03%), Postives = 90/186 (48.39%), Query Frame = 0


Query: 13  LRIFAFICLLIALVVIATDKLVLIEGSES---TFNDIQGYRFSILPTSNIHSNSHPKICS 72
           LR+     L+I +V+I+T+ + L   S S    FND+  Y                    
Sbjct: 20  LRVLTAAFLVITVVLISTNTVTLEVSSTSIKMRFNDVYAY-------------------- 79

Query: 73  SSCRYVLAVAIIGLVHTILQLGFSI-YYAVTKNIPFWKGLPQFNYYTDQVISWVLASAAG 132
              RY+L+ A+IGL++ ++QL  +I  +A     P      QFN+Y D++IS++LA+ + 
Sbjct: 80  ---RYMLSAAVIGLLYAVVQLFLTISQFATGTTHPL---NYQFNFYGDKIISYLLATGSA 139

Query: 133 AGLAVSADRKMLLNEVVETGIGDCGVLFAALDQQKWLVDDFFDRANIASAILFLAFLSIA 192
           AG  VS D K     ++E         F + D     VD FF +   ++++L  AF+S+A
Sbjct: 140 AGFGVSKDLKETFLALIE---------FDSTDP----VDKFFSKGYASASLLLFAFVSLA 166

Query: 193 TILLLS 195
            + + S
Sbjct: 200 VLSVFS 166

[Close]

BLAST of CmoCh01G007840 vs. ExPASy Swiss-Prot
Match: Q56X75 (CASP-like protein 4D2 OS=Arabidopsis thaliana OX=3702 GN=At2g39518 PE=2 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 7.8e-08
Identity = 51/186 (27.42%), Postives = 93/186 (50.00%), Query Frame = 0


Query: 13  LRIFAFICLLIALVVIATDKLVLI-EGSESTFNDIQGYRFSILPTSNIHSNSHPKICSSS 72
           LR+   + L+IAL++++T+ + ++ +GS   F+    Y +                    
Sbjct: 20  LRVLTGVFLVIALIILSTNSVTIVSQGSALKFHFKDVYAY-------------------- 79

Query: 73  CRYVLAVAIIGLVHTILQLGFSI-YYAVTKNIPFWKGLPQFNYYTDQVISWVLASAAGAG 132
            RY+L+ A+IGLV+ ++QL F+I  +A     PF     Q ++Y D++IS+++A+ + AG
Sbjct: 80  -RYMLSAAVIGLVYAVIQLFFTISEFATGVKNPF---NYQLDFYGDKLISYLVATGSAAG 139

Query: 133 LAVSADRKMLLNEVVETGIGDCGVLFAALDQQKWLVDDFFDRANIASAILFLAFLSIATI 192
             V+ D K            D  +   ALD     VD FF +   ++++L  AF+ +A +
Sbjct: 140 FGVTKDLK------------DTFLALVALDSTD-PVDKFFSKGYASASLLLFAFICLAVL 168

Query: 193 LLLSPF 197
            + S F
Sbjct: 200 SVFSSF 168

[Close]

BLAST of CmoCh01G007840 vs. ExPASy Swiss-Prot
Match: D7LD59 (CASP-like protein 4D2 OS=Arabidopsis lyrata subsp. lyrata OX=81972 GN=ARALYDRAFT_903204 PE=3 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 1.0e-07
Identity = 50/184 (27.17%), Postives = 92/184 (50.00%), Query Frame = 0


Query: 13  LRIFAFICLLIALVVIATDKLVLI-EGSESTFNDIQGYRFSILPTSNIHSNSHPKICSSS 72
           LR+   + L+IAL++++T+ + ++ +GS   F+    Y +                    
Sbjct: 20  LRVLTGVFLVIALIILSTNSVTIVSQGSALKFHFKDVYAY-------------------- 79

Query: 73  CRYVLAVAIIGLVHTILQLGFSI-YYAVTKNIPFWKGLPQFNYYTDQVISWVLASAAGAG 132
            RY+L+ A+IGL++ ++QL F+I  +A     PF     Q ++Y D++IS+++A+ + AG
Sbjct: 80  -RYMLSAAVIGLLYAVIQLFFTISEFATGMKNPF---NYQLDFYGDKLISYLVATGSAAG 139

Query: 133 LAVSADRKMLLNEVVETGIGDCGVLFAALDQQKWLVDDFFDRANIASAILFLAFLSIATI 192
             VS D K            D  +   ALD     VD FF R   ++++L  +F+ +A +
Sbjct: 140 FGVSKDLK------------DAFIALVALDSTD-PVDKFFSRGYASASLLLFSFICLAVL 166

Query: 193 LLLS 195
            + S
Sbjct: 200 SVFS 166

[Close]

BLAST of CmoCh01G007840 vs. ExPASy Swiss-Prot
Match: B9SXY8 (CASP-like protein 4D1 OS=Ricinus communis OX=3988 GN=RCOM_1206790 PE=3 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 1.3e-07
Identity = 53/189 (28.04%), Postives = 90/189 (47.62%), Query Frame = 0


Query: 13  LRIFAFICLLIALVVIATD----KLVLIEGSESTFNDIQGYRFSILPTSNIHSNSHPKIC 72
           LRI  FI L+ +LV++ T+    +L L+E  +  F D+  Y                   
Sbjct: 17  LRILTFIFLIASLVILTTNTATLELDLVE-VKVHFKDVYAY------------------- 76

Query: 73  SSSCRYVLAVAIIGLVHTILQLGFSIYYAVTKN-IPFWKGLPQFNYYTDQVISWVLASAA 132
               RY+LA  +IGL +T+LQ+ F++YY  T N +    G   F+++ D+VIS++L + A
Sbjct: 77  ----RYMLATIVIGLAYTVLQIAFTLYYVATGNRMMSGDGNLAFDFFGDKVISYILVTGA 136

Query: 133 GAGLAVSADRKMLLNEVVETGIGDCGVLFAALDQQKWLVDDFFDRANIASAILFLAFLSI 192
            AG A + D K      V +G GD               D F ++   ++++L + F+  
Sbjct: 137 AAGFASTKDIK-----PVFSGSGD--------------FDAFINKGYASASLLLIGFVCT 162

Query: 193 ATILLLSPF 197
           A + + S +
Sbjct: 197 AVLSVFSSY 162

[Close]

BLAST of CmoCh01G007840 vs. ExPASy TrEMBL
Match: A0A6J1GBH8 (CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111452662 PE=3 SV=1)

HSP 1 Score: 451.1 bits (1159), Expect = 3.4e-123
Identity = 250/273 (91.58%), Postives = 250/273 (91.58%), Query Frame = 0


Query: 1   MGRMVVAFIGIGLRIFAFICLLIALVVIATDKLVLIEGSESTFNDIQGYRFSILPTSNIH 60
           MGRMVVAFIGIGLRIFAFICLLIALVVIATDKLVLIEGSESTFNDIQGY           
Sbjct: 1   MGRMVVAFIGIGLRIFAFICLLIALVVIATDKLVLIEGSESTFNDIQGY----------- 60

Query: 61  SNSHPKICSSSCRYVLAVAIIGLVHTILQLGFSIYYAVTKNIPFWKGLPQFNYYTDQVIS 120
                       RYVLAVAIIGLVHTILQLGFSIYYAVTKNIPFWKGLPQFNYYTDQVIS
Sbjct: 61  ------------RYVLAVAIIGLVHTILQLGFSIYYAVTKNIPFWKGLPQFNYYTDQVIS 120

Query: 121 WVLASAAGAGLAVSADRKMLLNEVVETGIGDCGVLFAALDQQKWLVDDFFDRANIASAIL 180
           WVLASAAGAGLAVSADRKMLLNEVVETGIGDCGVLFAALDQQKWLVDDFFDRANIASAIL
Sbjct: 121 WVLASAAGAGLAVSADRKMLLNEVVETGIGDCGVLFAALDQQKWLVDDFFDRANIASAIL 180

Query: 181 FLAFLSIATILLLSPFNRIEPIPTTQDLEAQSPQAQNGKAQSPQAQTVEAQSPHAHTVEA 240
           FLAFLSIATILLLSPFNRIEPIPTTQDLEAQSPQAQNGKAQSPQAQTVEAQSPHAHTVEA
Sbjct: 181 FLAFLSIATILLLSPFNRIEPIPTTQDLEAQSPQAQNGKAQSPQAQTVEAQSPHAHTVEA 240

Query: 241 HSPQAQSPRAQQVDAHSPQAQKVEAQPTETSST 274
           HSPQAQSPRAQQVDAHSPQAQKVEAQPTETSST
Sbjct: 241 HSPQAQSPRAQQVDAHSPQAQKVEAQPTETSST 250

[Close]

BLAST of CmoCh01G007840 vs. ExPASy TrEMBL
Match: A0A6J1K769 (CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111492902 PE=3 SV=1)

HSP 1 Score: 348.6 bits (893), Expect = 2.4e-92
Identity = 202/273 (73.99%), Postives = 213/273 (78.02%), Query Frame = 0


Query: 1   MGRMVVAFIGIGLRIFAFICLLIALVVIATDKLVLIEGSESTFNDIQGYRFSILPTSNIH 60
           M RMVVAFIGIGLRIFAFICL IALVVIATDKLVLI+GSESTFND+QGY           
Sbjct: 1   MDRMVVAFIGIGLRIFAFICLFIALVVIATDKLVLIDGSESTFNDVQGY----------- 60

Query: 61  SNSHPKICSSSCRYVLAVAIIGLVHTILQLGFSIYYAVTKNIPFWKGLPQFNYYTDQVIS 120
                       RYVLAVAIIGLVHTILQLGFSIYYAVT+ +PFWKGLPQFNYY DQVI+
Sbjct: 61  ------------RYVLAVAIIGLVHTILQLGFSIYYAVTQIVPFWKGLPQFNYYADQVIN 120

Query: 121 WVLASAAGAGLAVSADRKMLLNEVVETGIGDCGVLFAALDQQKWLVDDFFDRANIASAIL 180
           WVLASAAGAGLAVSADRKMLLN+VVE  IGDC VLFAALDQQKWLV+DFFDRANIASAIL
Sbjct: 121 WVLASAAGAGLAVSADRKMLLNQVVENDIGDCVVLFAALDQQKWLVNDFFDRANIASAIL 180

Query: 181 FLAFLSIATILLLSPFNRIEPIPTTQDLEAQSPQAQNGKAQSPQAQTVEAQSPHAHTVEA 240
           FLAFLSIAT+LLLSPFNRI+P+PTTQDLEA SPQAQ  +AQSPQAQ VEAQ         
Sbjct: 181 FLAFLSIATLLLLSPFNRIKPMPTTQDLEAHSPQAQKIQAQSPQAQKVEAQ--------- 225

Query: 241 HSPQAQSPRAQQVDAHSPQAQKVEAQPTETSST 274
                           SPQAQ VEAQPTETSST
Sbjct: 241 ----------------SPQAQTVEAQPTETSST 225

[Close]

BLAST of CmoCh01G007840 vs. ExPASy TrEMBL
Match: A0A6J1C9J6 (CASP-like protein OS=Momordica charantia OX=3673 GN=LOC111008706 PE=3 SV=1)

HSP 1 Score: 241.1 bits (614), Expect = 5.3e-60
Identity = 134/225 (59.56%), Postives = 165/225 (73.33%), Query Frame = 0


Query: 1   MGRMVVAFIGIGLRIFAFICLLIALVVIATDKLVLIEGSESTFNDIQGYRFSILPTSNIH 60
           M   VVAFI IGLR F FICLLIALVVIATDKL LI+G ++TFNDI GY           
Sbjct: 1   MDPKVVAFIVIGLRSFTFICLLIALVVIATDKLALIDGYKATFNDIHGY----------- 60

Query: 61  SNSHPKICSSSCRYVLAVAIIGLVHTILQLGFSIYYAVTKNIPFWKGLPQFNYYTDQVIS 120
                       RYVL++AIIGL HTILQLGFS+Y+ +T+NIPFW GLPQFNYY DQV++
Sbjct: 61  ------------RYVLSIAIIGLAHTILQLGFSLYHVLTQNIPFWNGLPQFNYYADQVLA 120

Query: 121 WVLASAAGAGLAVSADRKMLLNEVVETGIGDCGVLFAALDQQKWLVDDFFDRANIASAIL 180
           WVLASAAGAG AV+A+ K L++E ++  +GD  +   A+DQQ+ L+DDFFD+ANIA+AIL
Sbjct: 121 WVLASAAGAGFAVTAELKRLVDENIKNAVGDYELFIPAVDQQESLIDDFFDKANIATAIL 180

Query: 181 FLAFLSIATILLLSPFNRIEPIPTTQDLEAQSPQAQNGKAQSPQA 226
           FLAFLS+AT+LLLSPFNRI+P+ TT     Q P+AQ  +  +P A
Sbjct: 181 FLAFLSMATLLLLSPFNRIKPLETT----TQDPEAQAKEPTAPGA 198

[Close]

BLAST of CmoCh01G007840 vs. ExPASy TrEMBL
Match: A0A5D3BGC2 (CASP-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G00320 PE=3 SV=1)

HSP 1 Score: 231.9 bits (590), Expect = 3.2e-57
Identity = 136/233 (58.37%), Postives = 161/233 (69.10%), Query Frame = 0


Query: 1   MGRMVVAFIGIGLRIFAFICLLIALVVIATDKLVLIEGSESTFNDIQGYRFSILPTSNIH 60
           M   V+  IGIG+RIF FICLLIALVVIATDKL LI G ++TFND+ GY           
Sbjct: 1   MDPKVLPLIGIGIRIFVFICLLIALVVIATDKLSLINGFKATFNDVHGY----------- 60

Query: 61  SNSHPKICSSSCRYVLAVAIIGLVHTILQLGFSIYYAVTKNIPFWKGLPQFNYYTDQVIS 120
                       RYVL+VA IGL HTILQLGFSIY+ +T+NI FW GLPQ NYY DQVI+
Sbjct: 61  ------------RYVLSVATIGLAHTILQLGFSIYHVLTQNILFWNGLPQVNYYADQVIT 120

Query: 121 WVLASAAGAGLAVSADRKMLLNEVVETGIGD-CGVLFAALDQQKWLVDDFFDRANIASAI 180
           WVLA+A GAG AVS + K  +N  +    GD  G   A +D+QK L+DDFFD+ANIA+AI
Sbjct: 121 WVLATAVGAGFAVSGELKSYVNSRINKEFGDYYGFFSAQVDEQKSLIDDFFDKANIATAI 180

Query: 181 LFLAFLSIATILLLSPFNRIEPIPTTQDLEAQSPQAQNGKAQSPQAQTVEAQS 233
           LFLAF+S+AT+LLLSPFNRI+P P    L  Q P+AQ  +AQS QAQ  EAQS
Sbjct: 181 LFLAFISMATLLLLSPFNRIKPTP----LPTQDPEAQKLEAQSSQAQQTEAQS 206

[Close]

BLAST of CmoCh01G007840 vs. ExPASy TrEMBL
Match: A0A1S3BYF7 (CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103494310 PE=3 SV=1)

HSP 1 Score: 231.9 bits (590), Expect = 3.2e-57
Identity = 136/233 (58.37%), Postives = 161/233 (69.10%), Query Frame = 0


Query: 1   MGRMVVAFIGIGLRIFAFICLLIALVVIATDKLVLIEGSESTFNDIQGYRFSILPTSNIH 60
           M   V+  IGIG+RIF FICLLIALVVIATDKL LI G ++TFND+ GY           
Sbjct: 1   MDPKVLPLIGIGIRIFVFICLLIALVVIATDKLSLINGFKATFNDVHGY----------- 60

Query: 61  SNSHPKICSSSCRYVLAVAIIGLVHTILQLGFSIYYAVTKNIPFWKGLPQFNYYTDQVIS 120
                       RYVL+VA IGL HTILQLGFSIY+ +T+NI FW GLPQ NYY DQVI+
Sbjct: 61  ------------RYVLSVATIGLAHTILQLGFSIYHVLTQNILFWNGLPQVNYYADQVIT 120

Query: 121 WVLASAAGAGLAVSADRKMLLNEVVETGIGD-CGVLFAALDQQKWLVDDFFDRANIASAI 180
           WVLA+A GAG AVS + K  +N  +    GD  G   A +D+QK L+DDFFD+ANIA+AI
Sbjct: 121 WVLATAVGAGFAVSGELKSYVNSRINKEFGDYYGFFSAQVDEQKSLIDDFFDKANIATAI 180

Query: 181 LFLAFLSIATILLLSPFNRIEPIPTTQDLEAQSPQAQNGKAQSPQAQTVEAQS 233
           LFLAF+S+AT+LLLSPFNRI+P P    L  Q P+AQ  +AQS QAQ  EAQS
Sbjct: 181 LFLAFISMATLLLLSPFNRIKPTP----LPTQDPEAQKLEAQSSQAQQTEAQS 206

[Close]

BLAST of CmoCh01G007840 vs. NCBI nr
Match: XP_022949251.1 (CASP-like protein 4D1 [Cucurbita moschata])

HSP 1 Score: 451.1 bits (1159), Expect = 7.0e-123
Identity = 250/273 (91.58%), Postives = 250/273 (91.58%), Query Frame = 0


Query: 1   MGRMVVAFIGIGLRIFAFICLLIALVVIATDKLVLIEGSESTFNDIQGYRFSILPTSNIH 60
           MGRMVVAFIGIGLRIFAFICLLIALVVIATDKLVLIEGSESTFNDIQGY           
Sbjct: 1   MGRMVVAFIGIGLRIFAFICLLIALVVIATDKLVLIEGSESTFNDIQGY----------- 60

Query: 61  SNSHPKICSSSCRYVLAVAIIGLVHTILQLGFSIYYAVTKNIPFWKGLPQFNYYTDQVIS 120
                       RYVLAVAIIGLVHTILQLGFSIYYAVTKNIPFWKGLPQFNYYTDQVIS
Sbjct: 61  ------------RYVLAVAIIGLVHTILQLGFSIYYAVTKNIPFWKGLPQFNYYTDQVIS 120

Query: 121 WVLASAAGAGLAVSADRKMLLNEVVETGIGDCGVLFAALDQQKWLVDDFFDRANIASAIL 180
           WVLASAAGAGLAVSADRKMLLNEVVETGIGDCGVLFAALDQQKWLVDDFFDRANIASAIL
Sbjct: 121 WVLASAAGAGLAVSADRKMLLNEVVETGIGDCGVLFAALDQQKWLVDDFFDRANIASAIL 180

Query: 181 FLAFLSIATILLLSPFNRIEPIPTTQDLEAQSPQAQNGKAQSPQAQTVEAQSPHAHTVEA 240
           FLAFLSIATILLLSPFNRIEPIPTTQDLEAQSPQAQNGKAQSPQAQTVEAQSPHAHTVEA
Sbjct: 181 FLAFLSIATILLLSPFNRIEPIPTTQDLEAQSPQAQNGKAQSPQAQTVEAQSPHAHTVEA 240

Query: 241 HSPQAQSPRAQQVDAHSPQAQKVEAQPTETSST 274
           HSPQAQSPRAQQVDAHSPQAQKVEAQPTETSST
Sbjct: 241 HSPQAQSPRAQQVDAHSPQAQKVEAQPTETSST 250

[Close]

BLAST of CmoCh01G007840 vs. NCBI nr
Match: XP_023524544.1 (CASP-like protein 4D1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 404.8 bits (1039), Expect = 5.8e-109
Identity = 229/273 (83.88%), Postives = 234/273 (85.71%), Query Frame = 0


Query: 1   MGRMVVAFIGIGLRIFAFICLLIALVVIATDKLVLIEGSESTFNDIQGYRFSILPTSNIH 60
           M RMVVAFIGIGLRIFAFICL IALVVIATDKLVLI+GSESTFNDIQGY           
Sbjct: 1   MDRMVVAFIGIGLRIFAFICLFIALVVIATDKLVLIDGSESTFNDIQGY----------- 60

Query: 61  SNSHPKICSSSCRYVLAVAIIGLVHTILQLGFSIYYAVTKNIPFWKGLPQFNYYTDQVIS 120
                       RYVL+VAIIGLVHTILQLGFSIYYAVTKNIPFW GLPQFNYYTDQVIS
Sbjct: 61  ------------RYVLSVAIIGLVHTILQLGFSIYYAVTKNIPFWNGLPQFNYYTDQVIS 120

Query: 121 WVLASAAGAGLAVSADRKMLLNEVVETGIGDCGVLFAALDQQKWLVDDFFDRANIASAIL 180
           WVL SAAGAGLAVSADRKMLLN+VVE GIGDCGVLFAALDQQKWLVDDFFDRANIASAIL
Sbjct: 121 WVLVSAAGAGLAVSADRKMLLNQVVENGIGDCGVLFAALDQQKWLVDDFFDRANIASAIL 180

Query: 181 FLAFLSIATILLLSPFNRIEPIPTTQDLEAQSPQAQNGKAQSPQAQTVEAQSPHAHTVEA 240
           FLAFLSIATILLLSPFNR++PIPTTQDLEA SPQAQ  KAQSPQA TVEAQSP AHTVE 
Sbjct: 181 FLAFLSIATILLLSPFNRLKPIPTTQDLEAHSPQAQKCKAQSPQAHTVEAQSPQAHTVE- 240

Query: 241 HSPQAQSPRAQQVDAHSPQAQKVEAQPTETSST 274
               AQSPRAQQVDA SPQAQKVEAQPTETSST
Sbjct: 241 ----AQSPRAQQVDAQSPQAQKVEAQPTETSST 245

[Close]

BLAST of CmoCh01G007840 vs. NCBI nr
Match: KAG7037064.1 (CASP-like protein 4D1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 403.3 bits (1035), Expect = 1.7e-108
Identity = 228/273 (83.52%), Postives = 233/273 (85.35%), Query Frame = 0


Query: 1   MGRMVVAFIGIGLRIFAFICLLIALVVIATDKLVLIEGSESTFNDIQGYRFSILPTSNIH 60
           M  MVVAFIGIGLRIFAFICL IALVVIATDKLVLI+GSESTFNDIQGY           
Sbjct: 1   MDHMVVAFIGIGLRIFAFICLFIALVVIATDKLVLIDGSESTFNDIQGY----------- 60

Query: 61  SNSHPKICSSSCRYVLAVAIIGLVHTILQLGFSIYYAVTKNIPFWKGLPQFNYYTDQVIS 120
                       RYVL+VAIIGLVHTILQLGFSIYYAVTK IPFWKGLPQFNYYTDQVIS
Sbjct: 61  ------------RYVLSVAIIGLVHTILQLGFSIYYAVTKTIPFWKGLPQFNYYTDQVIS 120

Query: 121 WVLASAAGAGLAVSADRKMLLNEVVETGIGDCGVLFAALDQQKWLVDDFFDRANIASAIL 180
           WVLASAAGAGLAVSADRKMLLN+VVE GIGDCGVLFAALDQQKWLVDDFFDRANIASAIL
Sbjct: 121 WVLASAAGAGLAVSADRKMLLNQVVENGIGDCGVLFAALDQQKWLVDDFFDRANIASAIL 180

Query: 181 FLAFLSIATILLLSPFNRIEPIPTTQDLEAQSPQAQNGKAQSPQAQTVEAQSPHAHTVEA 240
           FLAFLSIATILLLSPFNR++PIPTTQDLEA SPQAQ  KAQSPQA TVEAQSP AHTVE 
Sbjct: 181 FLAFLSIATILLLSPFNRLKPIPTTQDLEAHSPQAQKSKAQSPQAHTVEAQSPQAHTVE- 240

Query: 241 HSPQAQSPRAQQVDAHSPQAQKVEAQPTETSST 274
               AQSPRAQ VDA SPQAQKVEAQPTETSST
Sbjct: 241 ----AQSPRAQHVDAQSPQAQKVEAQPTETSST 245

[Close]

BLAST of CmoCh01G007840 vs. NCBI nr
Match: KAG6607394.1 (CASP-like protein 4D1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 367.1 bits (941), Expect = 1.3e-97
Identity = 211/273 (77.29%), Postives = 216/273 (79.12%), Query Frame = 0


Query: 1   MGRMVVAFIGIGLRIFAFICLLIALVVIATDKLVLIEGSESTFNDIQGYRFSILPTSNIH 60
           M  MVVAFIGIGLRIFAFICL IALVVIATDKLVLI+GSESTFNDIQGY           
Sbjct: 1   MDHMVVAFIGIGLRIFAFICLFIALVVIATDKLVLIDGSESTFNDIQGY----------- 60

Query: 61  SNSHPKICSSSCRYVLAVAIIGLVHTILQLGFSIYYAVTKNIPFWKGLPQFNYYTDQVIS 120
                       RYVL+VAIIGLVHTILQLGFSIYYAVTK IPFWKGLPQFNYYTDQVIS
Sbjct: 61  ------------RYVLSVAIIGLVHTILQLGFSIYYAVTKTIPFWKGLPQFNYYTDQVIS 120

Query: 121 WVLASAAGAGLAVSADRKMLLNEVVETGIGDCGVLFAALDQQKWLVDDFFDRANIASAIL 180
           WVLASAAGAGLAVSADRKMLLN+VVE GIGDCGVLFAALDQQKWLVDDFFDRANIASAIL
Sbjct: 121 WVLASAAGAGLAVSADRKMLLNQVVENGIGDCGVLFAALDQQKWLVDDFFDRANIASAIL 180

Query: 181 FLAFLSIATILLLSPFNRIEPIPTTQDLEAQSPQAQNGKAQSPQAQTVEAQSPHAHTVEA 240
           FLAFLSIATILLLSPFNR++PIPTTQDLEA SPQAQ  KAQSPQA TVEAQ         
Sbjct: 181 FLAFLSIATILLLSPFNRLKPIPTTQDLEAHSPQAQKSKAQSPQAHTVEAQ--------- 225

Query: 241 HSPQAQSPRAQQVDAHSPQAQKVEAQPTETSST 274
                           SPQAQKVEAQPTETSST
Sbjct: 241 ----------------SPQAQKVEAQPTETSST 225

[Close]

BLAST of CmoCh01G007840 vs. NCBI nr
Match: XP_022998177.1 (CASP-like protein 4D1 [Cucurbita maxima])

HSP 1 Score: 348.6 bits (893), Expect = 4.9e-92
Identity = 202/273 (73.99%), Postives = 213/273 (78.02%), Query Frame = 0


Query: 1   MGRMVVAFIGIGLRIFAFICLLIALVVIATDKLVLIEGSESTFNDIQGYRFSILPTSNIH 60
           M RMVVAFIGIGLRIFAFICL IALVVIATDKLVLI+GSESTFND+QGY           
Sbjct: 1   MDRMVVAFIGIGLRIFAFICLFIALVVIATDKLVLIDGSESTFNDVQGY----------- 60

Query: 61  SNSHPKICSSSCRYVLAVAIIGLVHTILQLGFSIYYAVTKNIPFWKGLPQFNYYTDQVIS 120
                       RYVLAVAIIGLVHTILQLGFSIYYAVT+ +PFWKGLPQFNYY DQVI+
Sbjct: 61  ------------RYVLAVAIIGLVHTILQLGFSIYYAVTQIVPFWKGLPQFNYYADQVIN 120

Query: 121 WVLASAAGAGLAVSADRKMLLNEVVETGIGDCGVLFAALDQQKWLVDDFFDRANIASAIL 180
           WVLASAAGAGLAVSADRKMLLN+VVE  IGDC VLFAALDQQKWLV+DFFDRANIASAIL
Sbjct: 121 WVLASAAGAGLAVSADRKMLLNQVVENDIGDCVVLFAALDQQKWLVNDFFDRANIASAIL 180

Query: 181 FLAFLSIATILLLSPFNRIEPIPTTQDLEAQSPQAQNGKAQSPQAQTVEAQSPHAHTVEA 240
           FLAFLSIAT+LLLSPFNRI+P+PTTQDLEA SPQAQ  +AQSPQAQ VEAQ         
Sbjct: 181 FLAFLSIATLLLLSPFNRIKPMPTTQDLEAHSPQAQKIQAQSPQAQKVEAQ--------- 225

Query: 241 HSPQAQSPRAQQVDAHSPQAQKVEAQPTETSST 274
                           SPQAQ VEAQPTETSST
Sbjct: 241 ----------------SPQAQTVEAQPTETSST 225

[Close]

BLAST of CmoCh01G007840 vs. TAIR 10
Match: AT2G39530.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 62.4 bits (150), Expect = 6.6e-10
Identity = 57/186 (30.65%), Postives = 91/186 (48.92%), Query Frame = 0


Query: 13  LRIFAFICLLIALVVIATDKLVLIEGSES---TFNDIQGYRFSILPTSNIHSNSHPKICS 72
           LR+     LLI +V+I+T+ + L   S S    FND+  Y                    
Sbjct: 20  LRVLTAAFLLITVVLISTNTVTLEISSTSIKLPFNDVYAY-------------------- 79

Query: 73  SSCRYVLAVAIIGLVHTILQLGFSI-YYAVTKNIPFWKGLPQFNYYTDQVISWVLASAAG 132
              RY+L+ A+IGLV+ ++QL  +I  +A  K  P      QF++Y D+VIS++LA+ + 
Sbjct: 80  ---RYMLSAAVIGLVYAVVQLFLTISQFATGKTHPL---TYQFDFYGDKVISYLLATGSA 139

Query: 133 AGLAVSADRKMLLNEVVETGIGDCGVLFAALDQQKWLVDDFFDRANIASAILFLAFLSIA 192
           AG  VS D K     ++E         F + D     VD FF +   ++++L  AF+S+A
Sbjct: 140 AGFGVSKDLKDTYIALIE---------FDSTDP----VDKFFSKGYASASLLLFAFVSLA 166

Query: 193 TILLLS 195
            + + S
Sbjct: 200 VLSVFS 166

[Close]

BLAST of CmoCh01G007840 vs. TAIR 10
Match: AT2G39518.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 59.3 bits (142), Expect = 5.5e-09
Identity = 51/186 (27.42%), Postives = 93/186 (50.00%), Query Frame = 0


Query: 13  LRIFAFICLLIALVVIATDKLVLI-EGSESTFNDIQGYRFSILPTSNIHSNSHPKICSSS 72
           LR+   + L+IAL++++T+ + ++ +GS   F+    Y +                    
Sbjct: 20  LRVLTGVFLVIALIILSTNSVTIVSQGSALKFHFKDVYAY-------------------- 79

Query: 73  CRYVLAVAIIGLVHTILQLGFSI-YYAVTKNIPFWKGLPQFNYYTDQVISWVLASAAGAG 132
            RY+L+ A+IGLV+ ++QL F+I  +A     PF     Q ++Y D++IS+++A+ + AG
Sbjct: 80  -RYMLSAAVIGLVYAVIQLFFTISEFATGVKNPF---NYQLDFYGDKLISYLVATGSAAG 139

Query: 133 LAVSADRKMLLNEVVETGIGDCGVLFAALDQQKWLVDDFFDRANIASAILFLAFLSIATI 192
             V+ D K            D  +   ALD     VD FF +   ++++L  AF+ +A +
Sbjct: 140 FGVTKDLK------------DTFLALVALDSTD-PVDKFFSKGYASASLLLFAFICLAVL 168

Query: 193 LLLSPF 197
            + S F
Sbjct: 200 SVFSSF 168

The following BLAST results are available for this feature:

BLAST of CmoCh01G007840 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8GWD5	9.2e-09	30.65	CASP-like protein 4D1 OS=Arabidopsis thaliana OX=3702 GN=At2g39530 PE=2 SV=1	[more]
D7LD60	6.0e-08	29.03	CASP-like protein 4D1 OS=Arabidopsis lyrata subsp. lyrata OX=81972 GN=ARALYDRAFT...	[more]
Q56X75	7.8e-08	27.42	CASP-like protein 4D2 OS=Arabidopsis thaliana OX=3702 GN=At2g39518 PE=2 SV=1	[more]
D7LD59	1.0e-07	27.17	CASP-like protein 4D2 OS=Arabidopsis lyrata subsp. lyrata OX=81972 GN=ARALYDRAFT...	[more]
B9SXY8	1.3e-07	28.04	CASP-like protein 4D1 OS=Ricinus communis OX=3988 GN=RCOM_1206790 PE=3 SV=1	[more]

BLAST of CmoCh01G007840 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GBH8	3.4e-123	91.58	CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111452662 PE=3 SV=1	[more]
A0A6J1K769	2.4e-92	73.99	CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111492902 PE=3 SV=1	[more]
A0A6J1C9J6	5.3e-60	59.56	CASP-like protein OS=Momordica charantia OX=3673 GN=LOC111008706 PE=3 SV=1	[more]
A0A5D3BGC2	3.2e-57	58.37	CASP-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G00...	[more]
A0A1S3BYF7	3.2e-57	58.37	CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103494310 PE=3 SV=1	[more]

BLAST of CmoCh01G007840 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022949251.1	7.0e-123	91.58	CASP-like protein 4D1 [Cucurbita moschata]	[more]
XP_023524544.1	5.8e-109	83.88	CASP-like protein 4D1 [Cucurbita pepo subsp. pepo]	[more]
KAG7037064.1	1.7e-108	83.52	CASP-like protein 4D1, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6607394.1	1.3e-97	77.29	CASP-like protein 4D1, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022998177.1	4.9e-92	73.99	CASP-like protein 4D1 [Cucurbita maxima]	[more]

BLAST of CmoCh01G007840 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G39530.1	6.6e-10	30.65	Uncharacterised protein family (UPF0497)	[more]
AT2G39518.1	5.5e-09	27.42	Uncharacterised protein family (UPF0497)	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006702	Casparian strip membrane protein domain	PFAM	PF04535	DUF588	coord: 72..185 e-value: 3.5E-7 score: 30.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 208..273
None	No IPR available	PANTHER	PTHR33573:SF17	CASP-LIKE PROTEIN 4D1	coord: 71..199
None	No IPR available	PANTHER	PTHR33573	CASP-LIKE PROTEIN 4A4	coord: 71..199
None	No IPR available	PANTHER	PTHR33573	CASP-LIKE PROTEIN 4A4	coord: 5..52
None	No IPR available	PANTHER	PTHR33573:SF17	CASP-LIKE PROTEIN 4D1	coord: 5..52

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh01G007840.1	CmoCh01G007840.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane