Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTGGTATGTACGATCAAGGAGGAGACGCTGCTCCTTCGTCTTACGGAGCCCCTGGAGGCGGTGGAGGAGGATACGGCGGCGGAGGGTATGGAGGCGGTGGTGGCGGATATGGTGGAAAGGGCGGCGATGGTGGATATGGCGGCGGAGGCCGAGGCGGCGGCGGTGGTGGTAGAGGATATGGAGGACGAGGTGGTGGCGGAGGCTACGGTGGGCGAGGTACGTGCTTCACTTGTTTATTAGATTTTATCTTCGTCGTTTAGAGACAAGCATCTTTGGGGAATAGAAACATCTTTTGAAGGAATAATTAATTATTTATCCTTTATTTTTAATTATAGTCGAGGAGGTTTTCTTTTAATTTATGGGTTCGACGATGTTTTGTTCTGTATTGCAATATCTTGGGTTTTTCGTGCTCTTAGGTGGGGTGTTTGGCTTGTATTTCGGTAGGAAGTTTCCAGTGATCAGAGATCTAATATGATACTAATAACAAATTGCTTTTTCTTTCGCCTTAAAGACTGACAATTTCTTCCTTACCTCAATCTTTTTATCTGCTTATTGGTTTGATCGAATTTAGGAGGCGGTGGTGGTGGTGGCTATCAAGGAGGAGATCGTGGAGGGCGAGGTGGTGGACGTGGTGGGGGAGGTGGTCGTGGTGGAAGCGGGAGAGATGGCGATTGGGTCTGCCCTAATCCTGGGTATGATTTGTTTTTTCGTCGTCTATTACTGGGTTATTTTGTTTTATTTTTTTTATTTTCATAGATTCATCGAGCGGTTCAGCATCCTTGAATGCATAAATGTCAGACATTTATGATGGGGAACTTGTATACAGTTGTTCTGCTATTAAGTTTATTTGTTGTTGCTAATATTTTTGTTTTTGAAATGCCAAATAGCTGTGCGAATGTGAACTTTGCTAGAAGAGTGGAGTGTAACAAGTGTGGTACACCATCACCTGGTGGTGCCAGTGACAGAAGTGGTGGTGGTGGTAGTGGAGGATATAATAGGGGTGGAGCTGATGGGGGTTATGGTGGTAATCGTAATGGCAGAGGCGGTAGTTACCATGGTGGTAGAAGTGGAAATCATGATGGTGGTCGCTATGAAGGAGGCAACAGAGGTGGTAATTCTTATGGTGGTCACCAGGGAGGAGAGGATAGCGGGTACAGTCAGGTTCCTCCATCATCAGCCCCCCCATCTGGTGGTGTTGGTGGCTCTTATCCACCATCTTATCGTGGTGGAAGTGCAGATTATGGTACGGATGCAGTTCCTCCGCCTGCAAGCTACAGTGGAACTACCTACCCTCCAACTTATGGTGGTCCCACTGGTGGCTATGGCAGTGATGGTATAGGTGATGGACGGAGTGCGACTGGTCGTGGTGGGCCGTCAGCTGGATATGATGGTGCTTACAATGCAGGTGGTAAAGGTGGTGGTTACAATGCTGGTGGTAGAGGAGGTGGAAGCTATAATGCTGGTGGTGGTAGAGGTGGTGGTTATGGAAGTACACCAGCAGCAGAGCCAGCACAGGTGAAACAGTGCGACGAATCTTGTGATGATTCTTGTGATAACTCAAGAATCTATGTTTCGAATCTGCCAACAGATGTGACCATTGATGAATTGAGAGAACTATTTGGTGGCATTGGCCAAGTAAGTAATTTGTCATTAAACTATATTTTGTTGCATTTGATGTTTTATCCTCGTTCAAAAGTTATGTCTTTTAGTTCTTGAGGCATTTGTTTGTGATATTGGAAGCTCTTATAGTGTTAGTTCTATTCTCCTTGCCTATGGAGCGTCTAGAATTGATATTCTCATTGGCAATGGGCTAGCTCTATTCTTATTGCCAATAAACTGTGTTTCGTTTCTTAAAGTGCTGAATAAATTTTTTCAGCAATGGCTTTTGCATTTAGCATCCGATAGTGAACTGTTTAATTGAAGCCTTCTTTCAATTTCCAATTTGAAGATTGGAAGAATCAAGCAGAAGAGGGGCTACAAGGATCAGTGGCCTTGGAACATAAAAATATATACAGATGAGATGGGAAATAACAAAGGCGATGCATGTGTATCATATGAAGATCCCTCAGCGGCACATTCTGCTGGCGGTTTCTATAACAGTAATTACTGTGCTCTTTAGTTTAGAATAATAATAATAATATTAGCAATTGTTTTTAATTTTAGTTTAAACTTATATACGTTATCATTATTGTATGGTCATGTTTTTGTACTCTCAGATTATGATTTGAGAGGTCATAGCATCAATGTTGCAATGGCTGAGAAGTCTGCACCGAGGGCGCCTACATACAACCATGGGTATTTGCTTGCTATTGTTATTTCAAAACAAATAGAAAAGTCTGCGTTCTTGAGTATAGGAATACATATATCTTGAAATGTGTACTTCGTAAAGTTCTTGCTTTTTGTGAGTTGACGAGCACGAGAAATTGGCTATTGTAATTACCAAGTTGATAAAAGCTAAGAAGACCTTTGGGTCCCTATGTTTTCTCCTCACACATGCGTGCACAAAAAAATGAATCTTGTCTGCAGGAACCAGGTTAGGTAACTTGCAGTTTTTGCCAAAATATCAGATACTGTTTGATATTCCCAGACTCCATGCTATCTAGGAACTCTGTGTGAATACTCAATAATCACCATGATCTTGAGTTCTCATACATGATGCTATCATTGATACTTAGATTTGATTTTTTCTCTGAAATTCTAATTTATTTTGAAAATTGGACTTTTAATTAAATTTTTTCATGCTCATTTTAGTAGAAATATGTTATCTATTAGTCTTTTTTTGAGTTTAGAATTAATTATTTGATTGTCTCAAGATCATTTTATACTTGTGACTTTTTTTCCATAAATTCCAATAGGTTTTTTTTGGGGTAGTTTTTTGTTTTATTTAGTTTGGGGGTGGATTACTTATCTCCCTTCTTTTTGTGCCAATTTGTGTTTCTTACAAAGATATTTAACTAATTTTTGGTTTATTCGGCCTATGATTGATGACCTTATATTGGACTGCCATTAAATTGATTTTGTAATTCAATATCCAAGTATGTAGGATATGAATGGTTGCACCTTTTTTTGTTATGATTGTTGGGTTATGTTGCAAGATGCAACAATAGCTATTTTTTGTTTTAATTGATTTTTAGAATTAATCGTCCGGTAAATTTGTTTTGTGTAGAATGTGACTTGTTTTTTTTAAATGCTTCTGTTGTCTGAATGTGCAAATTATTTTATTAATCATGCTTTAAAAAAGATTCGTTCTTTTTCTTCTAACTCGCCTTTTCATGTTGCAGTGGTGGTGGCAGAGGTGGATATGGAGGTGGTGGTGGTGGTGATAGACGTAGAGATAGCTATAGGGACGGAGGCTCAGGACCTGATAGACATCAGCATGGTGGAAATAGATCTCGTCCTTACTGAGCAATTCGGCATTGAGCATTTTATGTAATGGGAATTGTGATCTTAGTGTTTTAATTTTGTTCCGTGGCTGGATTCTTGAATTGGAGACCAAAGAGGTAGGTTGTTCACTTTCTATGGGCAAGAGACCTCTTTGCTCCTTTTTAATATATAATAGTGGTACCTGGAGGGGTTATAATCTTGCTCAGGCTTGAGATTAACCTAGTTGTGTGAATGTCTTTTTTATAGAGGCAGGCGGATAATCTCCAAACTGCTTGTTGCTAAGGTAGGTGTTGATGTTTTCAGGTGAGTGCTTCTCTTTCCATAACCATCCTTACAATTTCACCGGTGCTGATGTATAAGCTCCTCCTGATCTCAGACATCCCTTGTTGGCTCTGATGCAAAGCATATCTTATAACCTATAATTATCATTTCTGCATTCATATTTTATTTATTTATTAAACATTAACTTGCCTCTCTTCTTTACTTCTAAATTTCATTCATTATTTCTTAGGGATTACTTGAAAATCTTTATTATTCCTTTATTCGTCTAGCATGTGCTCAAGGCTGCTTCTGATTTTTCAAATTTGTCTTCTATTTTTCAAGAGATTATCATATATCATGTGCTCAAGGGTTCAGAAAATTAGAGATGAGGATAGCTCATATCCAATATAGAAAACTTCAATTTCTTGAGGTCTATTACTGGGTGTAAATGGATTTTAGGCCTTTGCAATGTTGCATGTTTTTGCCGATTTCTGTTGTATGTAGACGTCGGGATGACGCTCCAAATTTTTAAAAAAGACTCATTTTAGTGTTAGATCTCAAGGCAAGTTAACCTCATGAACTGTGATGCTCTGCCATTGCTAGTTTCCTTCTGCATATTCAGTGACTGCAGGAAATATTTGTGAGCAATAACCTTGGAATTGTGTCGTATGAGTCTGATTTTGTTATTTGAAAAAGGACAAGTGGTTGTTTCTAGGGGTCTTTGTTCATATAATTTTTGTCTATATTTATTATAGTTCTTGAAATGGGTTCATAGTTGTAGTACCCCGGCCTGATTATGAGTGTGACAATCTCGATTGCAATTGTGTTGTGCAGAGGAGCGATCGATCATAAGAAATGCTATTGAGCTCTTCAGTTGATTGGTGTCATGAAAGAACAAATGAAGATTTACATTTGAAATCGATGCTTGAGATCTGATTTTAATGTCTTCATCCAACAGTTTGGGGAATGTTTGTGGCTTTGAGTTGGGTTACCGTACCAAAGTACTGTTCTTAAGAAACCAACAACCTCATCTGTTGTATCGGTTTTATAGTACGCTCTCTCCCACGGTCAAATGGTGTTTGATTCCCTCCTAATTCTTGACCGTACCATATGATTTTGAACTCGAAATCAGAAAAGCCCGAAAGAAAATTGAAATGTACTTTATGTTTTAGAAAATATTTGTAAGTGCAATTTAGTTTAAATTATTTAATGATTCATTAATCCAC
mRNA sequence
ATGTCTGGTATGTACGATCAAGGAGGAGACGCTGCTCCTTCGTCTTACGGAGCCCCTGGAGGCGGTGGAGGAGGATACGGCGGCGGAGGGTATGGAGGCGGTGGTGGCGGATATGGTGGAAAGGGCGGCGATGGTGGATATGGCGGCGGAGGCCGAGGCGGCGGCGGTGGTGGTAGAGGATATGGAGGACGAGGTGGTGGCGGAGGCTACGGTGGGCGAGGAGGCGGTGGTGGTGGTGGCTATCAAGGAGGAGATCGTGGAGGGCGAGGTGGTGGACGTGGTGGGGGAGGTGGTCGTGGTGGAAGCGGGAGAGATGGCGATTGGGTCTGCCCTAATCCTGGCTGTGCGAATGTGAACTTTGCTAGAAGAGTGGAGTGTAACAAGTGTGGTACACCATCACCTGGTGGTGCCAGTGACAGAAGTGGTGGTGGTGGTAGTGGAGGATATAATAGGGGTGGAGCTGATGGGGGTTATGGTGGTAATCGTAATGGCAGAGGCGGTAGTTACCATGGTGGTAGAAGTGGAAATCATGATGGTGGTCGCTATGAAGGAGGCAACAGAGGTGGTAATTCTTATGGTGGTCACCAGGGAGGAGAGGATAGCGGGTACAGTCAGGTTCCTCCATCATCAGCCCCCCCATCTGGTGGTGTTGGTGGCTCTTATCCACCATCTTATCGTGGTGGAAGTGCAGATTATGGTACGGATGCAGTTCCTCCGCCTGCAAGCTACAGTGGAACTACCTACCCTCCAACTTATGGTGGTCCCACTGGTGGCTATGGCAGTGATGGTATAGGTGATGGACGGAGTGCGACTGGTCGTGGTGGGCCGTCAGCTGGATATGATGGTGCTTACAATGCAGGTGGTAAAGGTGGTGGTTACAATGCTGGTGGTAGAGGAGGTGGAAGCTATAATGCTGGTGGTGGTAGAGGTGGTGGTTATGGAAGTACACCAGCAGCAGAGCCAGCACAGGTGAAACAGTGCGACGAATCTTGTGATGATTCTTGTGATAACTCAAGAATCTATGTTTCGAATCTGCCAACAGATGTGACCATTGATGAATTGAGAGAACTATTTGGTGGCATTGGCCAATTATGTCTTTTAGTTCTTGAGGCATTTGTTTGTGATATTGGAAGCTCTTATAGTGTTAGTTCTATTCTCCTTGCCTATGGAGCGTCTAGAATTGATATTCTCATTGGCAATGGGCTAGCTCTATTCTTATTGCCAATAAACTGTGTTTCGTTTCTTAAAGTGCTGAATAAATTTTTTCAGCAATGGCTTTTGCATTTAGCATCCGATAGTGAACTCCTTCTTTCAATTTCCAATTTGAAGATTGGAAGAATCAAGCAGAAGAGGGGCTACAAGGATCAGTGGCCTTGGAACATAAAAATATATACAGATGAGATGGGAAATAACAAAGGCGATGCATGTGTATCATATGAAGATCCCTCAGCGGCACATTCTGCTGGCGGTTTCTATAACAATTATGATTTGAGAGGTCATAGCATCAATGTTGCAATGGCTGAGAAGTCTGCACCGAGGGCGCCTACATACAACCATGGTGGTGGTGGCAGAGGTGGATATGGAGGTGGTGGTGGTGGTGATAGACGTAGAGATAGCTATAGGGACGGAGGCTCAGGACCTGATAGACATCAGCATGGTGGAAATAGATCTCGTCCTTACTGAGCAATTCGGCATTGAGCATTTTATGTAATGGGAATTGTGATCTTAGTGTTTTAATTTTGTTCCGTGGCTGGATTCTTGAATTGGAGACCAAAGAGAGGCAGGCGGATAATCTCCAAACTGCTTGTTGCTAAGGTAGGTGTTGATGTTTTCAGAGGAGCGATCGATCATAAGAAATGCTATTGAGCTCTTCAGTTGATTGGTGTCATGAAAGAACAAATGAAGATTTACATTTGAAATCGATGCTTGAGATCTGATTTTAATGTCTTCATCCAACAGTTTGGGGAATGTTTGTGGCTTTGAGTTGGGTTACCGTACCAAAGTACTGTTCTTAAGAAACCAACAACCTCATCTGTTGTATCGGTTTTATAGTACGCTCTCTCCCACGGTCAAATGGTGTTTGATTCCCTCCTAATTCTTGACCGTACCATATGATTTTGAACTCGAAATCAGAAAAGCCCGAAAGAAAATTGAAATGTACTTTATGTTTTAGAAAATATTTGTAAGTGCAATTTAGTTTAAATTATTTAATGATTCATTAATCCAC
Coding sequence (CDS)
ATGTCTGGTATGTACGATCAAGGAGGAGACGCTGCTCCTTCGTCTTACGGAGCCCCTGGAGGCGGTGGAGGAGGATACGGCGGCGGAGGGTATGGAGGCGGTGGTGGCGGATATGGTGGAAAGGGCGGCGATGGTGGATATGGCGGCGGAGGCCGAGGCGGCGGCGGTGGTGGTAGAGGATATGGAGGACGAGGTGGTGGCGGAGGCTACGGTGGGCGAGGAGGCGGTGGTGGTGGTGGCTATCAAGGAGGAGATCGTGGAGGGCGAGGTGGTGGACGTGGTGGGGGAGGTGGTCGTGGTGGAAGCGGGAGAGATGGCGATTGGGTCTGCCCTAATCCTGGCTGTGCGAATGTGAACTTTGCTAGAAGAGTGGAGTGTAACAAGTGTGGTACACCATCACCTGGTGGTGCCAGTGACAGAAGTGGTGGTGGTGGTAGTGGAGGATATAATAGGGGTGGAGCTGATGGGGGTTATGGTGGTAATCGTAATGGCAGAGGCGGTAGTTACCATGGTGGTAGAAGTGGAAATCATGATGGTGGTCGCTATGAAGGAGGCAACAGAGGTGGTAATTCTTATGGTGGTCACCAGGGAGGAGAGGATAGCGGGTACAGTCAGGTTCCTCCATCATCAGCCCCCCCATCTGGTGGTGTTGGTGGCTCTTATCCACCATCTTATCGTGGTGGAAGTGCAGATTATGGTACGGATGCAGTTCCTCCGCCTGCAAGCTACAGTGGAACTACCTACCCTCCAACTTATGGTGGTCCCACTGGTGGCTATGGCAGTGATGGTATAGGTGATGGACGGAGTGCGACTGGTCGTGGTGGGCCGTCAGCTGGATATGATGGTGCTTACAATGCAGGTGGTAAAGGTGGTGGTTACAATGCTGGTGGTAGAGGAGGTGGAAGCTATAATGCTGGTGGTGGTAGAGGTGGTGGTTATGGAAGTACACCAGCAGCAGAGCCAGCACAGGTGAAACAGTGCGACGAATCTTGTGATGATTCTTGTGATAACTCAAGAATCTATGTTTCGAATCTGCCAACAGATGTGACCATTGATGAATTGAGAGAACTATTTGGTGGCATTGGCCAATTATGTCTTTTAGTTCTTGAGGCATTTGTTTGTGATATTGGAAGCTCTTATAGTGTTAGTTCTATTCTCCTTGCCTATGGAGCGTCTAGAATTGATATTCTCATTGGCAATGGGCTAGCTCTATTCTTATTGCCAATAAACTGTGTTTCGTTTCTTAAAGTGCTGAATAAATTTTTTCAGCAATGGCTTTTGCATTTAGCATCCGATAGTGAACTCCTTCTTTCAATTTCCAATTTGAAGATTGGAAGAATCAAGCAGAAGAGGGGCTACAAGGATCAGTGGCCTTGGAACATAAAAATATATACAGATGAGATGGGAAATAACAAAGGCGATGCATGTGTATCATATGAAGATCCCTCAGCGGCACATTCTGCTGGCGGTTTCTATAACAATTATGATTTGAGAGGTCATAGCATCAATGTTGCAATGGCTGAGAAGTCTGCACCGAGGGCGCCTACATACAACCATGGTGGTGGTGGCAGAGGTGGATATGGAGGTGGTGGTGGTGGTGATAGACGTAGAGATAGCTATAGGGACGGAGGCTCAGGACCTGATAGACATCAGCATGGTGGAAATAGATCTCGTCCTTACTGA
Protein sequence
MSGMYDQGGDAAPSSYGAPGGGGGGYGGGGYGGGGGGYGGKGGDGGYGGGGRGGGGGGRGYGGRGGGGGYGGRGGGGGGGYQGGDRGGRGGGRGGGGGRGGSGRDGDWVCPNPGCANVNFARRVECNKCGTPSPGGASDRSGGGGSGGYNRGGADGGYGGNRNGRGGSYHGGRSGNHDGGRYEGGNRGGNSYGGHQGGEDSGYSQVPPSSAPPSGGVGGSYPPSYRGGSADYGTDAVPPPASYSGTTYPPTYGGPTGGYGSDGIGDGRSATGRGGPSAGYDGAYNAGGKGGGYNAGGRGGGSYNAGGGRGGGYGSTPAAEPAQVKQCDESCDDSCDNSRIYVSNLPTDVTIDELRELFGGIGQLCLLVLEAFVCDIGSSYSVSSILLAYGASRIDILIGNGLALFLLPINCVSFLKVLNKFFQQWLLHLASDSELLLSISNLKIGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACVSYEDPSAAHSAGGFYNNYDLRGHSINVAMAEKSAPRAPTYNHGGGGRGGYGGGGGGDRRRDSYRDGGSGPDRHQHGGNRSRPY
Homology
BLAST of CmoCh01G007270 vs. ExPASy Swiss-Prot
Match:
Q94KD0 (Transcription initiation factor TFIID subunit 15b OS=Arabidopsis thaliana OX=3702 GN=TAF15B PE=1 SV=1)
HSP 1 Score: 324.3 bits (830), Expect = 2.7e-87
Identity = 290/568 (51.06%), Postives = 324/568 (57.04%), Query Frame = 0
Query: 1 MSGMYDQGGDAAPSSYGAPGGGG--GGYGGGGYGGGGGGYGGKGGDGGYGGGGRGGGGGG 60
M+GMY+Q G GGG YGG GY GGGGGYG GGD GYGG G GGG
Sbjct: 1 MAGMYNQDG----------GGGAPIPSYGGDGY-GGGGGYG--GGDAGYGGRGASGGG-- 60
Query: 61 RGYGGRGGGGGYGGRG--GGGGGGYQGGDRGGRGGGRGGGGGRGGSGRDGDWVCPNPGCA 120
YGGRGG GG GGRG GGGGGGYQGGDRGGRG GG GRDGDW CPNP C
Sbjct: 61 -SYGGRGGYGGGGGRGNRGGGGGGYQGGDRGGRGS--------GGGGRDGDWRCPNPSCG 120
Query: 121 NVNFARRVECNKCGTPSPGGASDRSGGGGSGGYNRGGADGGYGGNRNGRGGSYHGGRSGN 180
NVNFARRVECNKCG +P G S + G GGY+RGG D GG GRGG GRS
Sbjct: 121 NVNFARRVECNKCGALAPSGTSSGANDRGGGGYSRGGGDSDRGG---GRGGRNDSGRS-- 180
Query: 181 HDGGRYEGGNRGGNSYGGHQGGEDSGYSQV-PPSSAPPSGGVGGSYPPSYRGGSADYGTD 240
++ RY+GG+R G SYG E+ Y Q PP++A PS GSYPP YG +
Sbjct: 181 YESSRYDGGSRSGGSYGSGSQRENGSYGQAPPPAAAIPSYDGSGSYPP-----PTGYGME 240
Query: 241 AVPPPASYSGTTYPPTYGGPTGGYGSDGIGDGRSATGRGGPSAGYDGAYNAGGKGGGYNA 300
AVPPP SYSG PP+YGGP GGYGSD G GRGG S GYDG +A
Sbjct: 241 AVPPPTSYSGG--PPSYGGPRGGYGSDAPSTG----GRGGRSGGYDGG----------SA 300
Query: 301 GGRGGGSYNAGGGRGGGYGSTPAAEPAQVKQCDESCDDSCDNSRIYVSNLPTDVTIDELR 360
R SY A +VKQCD CDD+CDN+RIY+SNLP DVT DEL+
Sbjct: 301 PRRQEASYE-------------DAATEKVKQCDADCDDNCDNARIYISNLPPDVTTDELK 360
Query: 361 ELFGGIGQLCLLVLEAFVCDIGSSYSVSSILLAYGASRIDILIGNGLALFLLPINCVSFL 420
+LFGGIGQ
Sbjct: 361 DLFGGIGQ---------------------------------------------------- 420
Query: 421 KVLNKFFQQWLLHLASDSELLLSISNLKIGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDA 480
+GRIKQKRGYKDQWP+NIKIYTDE GN KGDA
Sbjct: 421 ----------------------------VGRIKQKRGYKDQWPYNIKIYTDEKGNYKGDA 422
Query: 481 CVSYEDPSAAHSAGGFYNNYDLRGHSINVAMAEKSAPRAPTYNHGGGGRGGYG---GGGG 540
C++YEDPSAAHSAGGF+NNY++RG+ I+V MAEKSAPRAPT++ GGGRGG G GGGG
Sbjct: 481 CLAYEDPSAAHSAGGFFNNYEMRGNKISVTMAEKSAPRAPTFDQRGGGRGGGGGGYGGGG 422
Query: 541 GDRRRDSYRDGGSGPDRHQHGGNRSRPY 561
GDRRRD+Y SGPDR+ HGGNRSRPY
Sbjct: 541 GDRRRDNY---SSGPDRNHHGGNRSRPY 422
BLAST of CmoCh01G007270 vs. ExPASy TrEMBL
Match:
A0A6J1G9F8 (transcription initiation factor TFIID subunit 15b-like OS=Cucurbita moschata OX=3662 GN=LOC111452003 PE=4 SV=1)
HSP 1 Score: 805.8 bits (2080), Expect = 1.1e-229
Identity = 480/560 (85.71%), Postives = 480/560 (85.71%), Query Frame = 0
Query: 1 MSGMYDQGGDAAPSSYGAPGGGGGGYGGGGYGGGGGGYGGKGGDGGYGGGGRGGGGGGRG 60
MSGMYDQGGDAAPSSYGAPGGGGGGYGGGGYGGGGGGYGGKGGDGGYGGGGRGGGGGGRG
Sbjct: 1 MSGMYDQGGDAAPSSYGAPGGGGGGYGGGGYGGGGGGYGGKGGDGGYGGGGRGGGGGGRG 60
Query: 61 YGGRGGGGGYGGRGGGGGGGYQGGDRGGRGGGRGGGGGRGGSGRDGDWVCPNPGCANVNF 120
YGGRGGGGGYGGRGGGGGGGYQGGDRGGRGGGRGGGGGRGGSGRDGDWVCPNPGCANVNF
Sbjct: 61 YGGRGGGGGYGGRGGGGGGGYQGGDRGGRGGGRGGGGGRGGSGRDGDWVCPNPGCANVNF 120
Query: 121 ARRVECNKCGTPSPGGASDRSGGGGSGGYNRGGADGGYGGNRNGRGGSYHGGRSGNHDGG 180
ARRVECNKCGTPSPGGASDRSGGGGSGGYNRGGADGGYGGNRNGRGGSYHGGRSGNHDGG
Sbjct: 121 ARRVECNKCGTPSPGGASDRSGGGGSGGYNRGGADGGYGGNRNGRGGSYHGGRSGNHDGG 180
Query: 181 RYEGGNRGGNSYGGHQGGEDSGYSQVPPSSAPPSGGVGGSYPPSYRGGSADYGTDAVPPP 240
RYEGGNRGGNSYGGHQGGEDSGYSQVPPSSAPPSGGVGGSYPPSYRGGSADYGTDAVPPP
Sbjct: 181 RYEGGNRGGNSYGGHQGGEDSGYSQVPPSSAPPSGGVGGSYPPSYRGGSADYGTDAVPPP 240
Query: 241 ASYSGTTYPPTYGGPTGGYGSDGIGDGRSATGRGGPSAGYDGAYNAGGKGGGYNAGGRGG 300
ASYSGTTYPPTYGGPTGGYGSDGIGDGRSATGRGGPSAGYDGAYNAGGKGGGYNAGGRGG
Sbjct: 241 ASYSGTTYPPTYGGPTGGYGSDGIGDGRSATGRGGPSAGYDGAYNAGGKGGGYNAGGRGG 300
Query: 301 GSYNAGGGRGGGYGSTPAAEPAQVKQCDESCDDSCDNSRIYVSNLPTDVTIDELRELFGG 360
GSYNAGGGRGGGYGSTPAAEPAQVKQCDESCDDSCDNSRIYVSNLPTDVTIDELRELFGG
Sbjct: 301 GSYNAGGGRGGGYGSTPAAEPAQVKQCDESCDDSCDNSRIYVSNLPTDVTIDELRELFGG 360
Query: 361 IGQLCLLVLEAFVCDIGSSYSVSSILLAYGASRIDILIGNGLALFLLPINCVSFLKVLNK 420
IGQ
Sbjct: 361 IGQ--------------------------------------------------------- 420
Query: 421 FFQQWLLHLASDSELLLSISNLKIGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACVSYE 480
IGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACVSYE
Sbjct: 421 -----------------------IGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACVSYE 480
Query: 481 DPSAAHSAGGFYNNYDLRGHSINVAMAEKSAPRAPTYNHGGGGRGGYGGGGGGDRRRDSY 540
DPSAAHSAGGFYNNYDLRGHSINVAMAEKSAPRAPTYNHGGGGRGGYGGGGGGDRRRDSY
Sbjct: 481 DPSAAHSAGGFYNNYDLRGHSINVAMAEKSAPRAPTYNHGGGGRGGYGGGGGGDRRRDSY 480
Query: 541 RDGGSGPDRHQHGGNRSRPY 561
RDGGSGPDRHQHGGNRSRPY
Sbjct: 541 RDGGSGPDRHQHGGNRSRPY 480
BLAST of CmoCh01G007270 vs. ExPASy TrEMBL
Match:
A0A6J1KBD1 (transcription initiation factor TFIID subunit 15b OS=Cucurbita maxima OX=3661 GN=LOC111492756 PE=4 SV=1)
HSP 1 Score: 777.7 bits (2007), Expect = 3.3e-221
Identity = 470/563 (83.48%), Postives = 473/563 (84.01%), Query Frame = 0
Query: 1 MSGMYDQGGDAAPSSYGAPGGGGGGYGGGGYGGGGGGYGGKGGDGGYGGGGR---GGGGG 60
MSGMYDQGGDAAPSSYGAPGGGGGGYGGGGY GGGYGGKGGDGGYGGGGR GGGGG
Sbjct: 1 MSGMYDQGGDAAPSSYGAPGGGGGGYGGGGY---GGGYGGKGGDGGYGGGGRGGGGGGGG 60
Query: 61 GRGYGGRGGGGGYGGRGGGGGGGYQGGDRGGRGGGRGGGGGRGGSGRDGDWVCPNPGCAN 120
GRGYGGRGGGGGYGGRGGGGGGGYQGGDRGGRGGGRGGGGGRGGSGRDGDWVCPNPGCAN
Sbjct: 61 GRGYGGRGGGGGYGGRGGGGGGGYQGGDRGGRGGGRGGGGGRGGSGRDGDWVCPNPGCAN 120
Query: 121 VNFARRVECNKCGTPSPGGASDRSGGGGSGGYNRGGADGGYGGNRNGRGGSYHGGRSGNH 180
VNFARRVECNKCGTPSPGGASDRSGGGG GGYNRGGADGGYGGNRNGRGGSYHGGRSGNH
Sbjct: 121 VNFARRVECNKCGTPSPGGASDRSGGGGGGGYNRGGADGGYGGNRNGRGGSYHGGRSGNH 180
Query: 181 DGGRYEGGNRGGNSYGGHQGGEDSGYSQVPPSSAPPSGGVGGSYPPSYRGGSADYGTDAV 240
DGGRYEGGNRGGNSYGGHQGGEDSGYSQVPPSSAPPSGGVGGSYPPS+ GGSA+YGTDAV
Sbjct: 181 DGGRYEGGNRGGNSYGGHQGGEDSGYSQVPPSSAPPSGGVGGSYPPSFHGGSANYGTDAV 240
Query: 241 PPPASYSGTTYPPTYGGPTGGYGSDGIGDGRSATGRGGPSAGYDGAYNAGGKGGGYNAGG 300
PPPASYSG+TYPPTYGGPTGGYG DGIGDGRSATGRGGPSAGYDGAYNAGGKGGGYNAGG
Sbjct: 241 PPPASYSGSTYPPTYGGPTGGYGGDGIGDGRSATGRGGPSAGYDGAYNAGGKGGGYNAGG 300
Query: 301 RGGGSYNAGGGRGGGYGSTPAAEPAQVKQCDESCDDSCDNSRIYVSNLPTDVTIDELREL 360
RGGGSYNAGGGRGGGYGSTPAAEPAQVKQCDESCDDSCDNSRIYVSNLPTDVTIDELREL
Sbjct: 301 RGGGSYNAGGGRGGGYGSTPAAEPAQVKQCDESCDDSCDNSRIYVSNLPTDVTIDELREL 360
Query: 361 FGGIGQLCLLVLEAFVCDIGSSYSVSSILLAYGASRIDILIGNGLALFLLPINCVSFLKV 420
FGGIGQ
Sbjct: 361 FGGIGQ------------------------------------------------------ 420
Query: 421 LNKFFQQWLLHLASDSELLLSISNLKIGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACV 480
IGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACV
Sbjct: 421 --------------------------IGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACV 479
Query: 481 SYEDPSAAHSAGGFYNNYDLRGHSINVAMAEKSAPRAPTYNHGGGGRGGYGGGGGGDRRR 540
SYEDPSAAHSAGGFYNNYDLRGHSINVAMAEKSAPRAPTYNHGGGGRGGY GGGGGDRRR
Sbjct: 481 SYEDPSAAHSAGGFYNNYDLRGHSINVAMAEKSAPRAPTYNHGGGGRGGY-GGGGGDRRR 479
Query: 541 DSYRDGGSGPDRHQHGGNRSRPY 561
DSYRDGGSGPDRHQHGGNRSRPY
Sbjct: 541 DSYRDGGSGPDRHQHGGNRSRPY 479
BLAST of CmoCh01G007270 vs. ExPASy TrEMBL
Match:
A0A0A0LYC4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G533590 PE=4 SV=1)
HSP 1 Score: 682.2 bits (1759), Expect = 1.9e-192
Identity = 440/576 (76.39%), Postives = 451/576 (78.30%), Query Frame = 0
Query: 1 MSGMYDQGGDAAPSSYGAPGGG---GGGYGGGGYGGGGG-GYGGKGGDGGYGGGGR---G 60
MSGMYDQGGDAAP SYGAPGGG GGG GGGGYGGGGG GYGGKGGDGGYGGGGR G
Sbjct: 1 MSGMYDQGGDAAP-SYGAPGGGGGYGGGGGGGGYGGGGGAGYGGKGGDGGYGGGGRGGGG 60
Query: 61 GGGGGRGYGGRGGGGGYGGRGGGG-------GGGYQGGDRGGRGGGRGGGGGRGGSGRDG 120
GGGGGRGYGGRGGGGGYGGRGGGG GGGYQGGDRGGRG GRGGGGGRGGSGRDG
Sbjct: 61 GGGGGRGYGGRGGGGGYGGRGGGGGYQGGDRGGGYQGGDRGGRGAGRGGGGGRGGSGRDG 120
Query: 121 DWVCPNPGCANVNFARRVECNKCGTPSPGGASDRS-GGGGSGGYNRGGADGGYGGNRNGR 180
DWVCPNPGC N+NFARRVECNKCG PSPGGASDRS GGGG GGYNRGG D GYGG+RNGR
Sbjct: 121 DWVCPNPGCGNLNFARRVECNKCGAPSPGGASDRSGGGGGGGGYNRGGGDSGYGGSRNGR 180
Query: 181 GGSYHGGRSGNHDGGRYEGGNRGGNSYGGHQGGEDSGYSQVPPSSAPPSGGVGGSYPPSY 240
GGS+HGGRSG HDGGR EGG+RGGNSYGGHQGGEDSGY QVPPSSAP SGG+ GSYPPSY
Sbjct: 181 GGSFHGGRSGTHDGGRNEGGSRGGNSYGGHQGGEDSGYGQVPPSSAPSSGGLAGSYPPSY 240
Query: 241 RGGSADYGTDAVPPPASYSGTTYPPTYGGPTGGYGSDGIGDGRSATGRGGPSAGYDGAYN 300
GGS+DYGTDAVPPPASYSGTTYPPTYGGPTGGYG D +GDGR A RGGPSAGYDG YN
Sbjct: 241 HGGSSDYGTDAVPPPASYSGTTYPPTYGGPTGGYGGDSLGDGRGAAARGGPSAGYDGGYN 300
Query: 301 AGGKGGGYNAGGRGGGSYNAGGGRGGGYGSTPAAEPAQVKQCDESCDDSCDNSRIYVSNL 360
AGG+ GGYNAGGR GGSYNA GGR GGYGSTPAAEPAQVKQCD++CDDSCDNSRIYVSNL
Sbjct: 301 AGGR-GGYNAGGR-GGSYNASGGRAGGYGSTPAAEPAQVKQCDDNCDDSCDNSRIYVSNL 360
Query: 361 PTDVTIDELRELFGGIGQLCLLVLEAFVCDIGSSYSVSSILLAYGASRIDILIGNGLALF 420
P DVT DELRELFGGIGQ
Sbjct: 361 PPDVTTDELRELFGGIGQ------------------------------------------ 420
Query: 421 LLPINCVSFLKVLNKFFQQWLLHLASDSELLLSISNLKIGRIKQKRGYKDQWPWNIKIYT 480
IGRIKQKRGYKDQWPWNIKIYT
Sbjct: 421 --------------------------------------IGRIKQKRGYKDQWPWNIKIYT 480
Query: 481 DEMGNNKGDACVSYEDPSAAHSAGGFYNNYDLRGHSINVAMAEKSAPRA-PTYNHGGGGR 540
DEMGNNKGDACVSYEDPSAAHSAGGFYNNYDLRG+SINVAMAEKSAPRA P YNHGGGGR
Sbjct: 481 DEMGNNKGDACVSYEDPSAAHSAGGFYNNYDLRGYSINVAMAEKSAPRAPPAYNHGGGGR 491
Query: 541 GGYGGGGGGDRRRDSYRDGGSGPDRHQHGGNRSRPY 561
GGY GGGGDRRRDSYRDGGSGPDRHQHGGNRSRPY
Sbjct: 541 GGY--GGGGDRRRDSYRDGGSGPDRHQHGGNRSRPY 491
BLAST of CmoCh01G007270 vs. ExPASy TrEMBL
Match:
A0A1S3C4S9 (transcription initiation factor TFIID subunit 15b isoform X1 OS=Cucumis melo OX=3656 GN=LOC103497038 PE=4 SV=1)
HSP 1 Score: 681.4 bits (1757), Expect = 3.2e-192
Identity = 442/576 (76.74%), Postives = 452/576 (78.47%), Query Frame = 0
Query: 1 MSGMYDQGGDAAPSSYGAPGGG---GGGYGGGGYGGGGG--GYGGKGGDGGYGGGGR-GG 60
MSGMYDQGGDAAP SYGAPGGG GGG GGGGYGGGGG GYGGKGGDGGYGGGGR GG
Sbjct: 1 MSGMYDQGGDAAP-SYGAPGGGGGYGGGGGGGGYGGGGGGAGYGGKGGDGGYGGGGRGGG 60
Query: 61 GGGGRGYGGR--GGGGGYGGRGGGG-------GGGYQGGDRGGRGGGRGGGGGRGGSGRD 120
GGGGRGYGGR GGGGGYGGRGGGG GGGYQGGDRGGRG GRGGGGGRGGSGRD
Sbjct: 61 GGGGRGYGGRGGGGGGGYGGRGGGGGYQGGDRGGGYQGGDRGGRGAGRGGGGGRGGSGRD 120
Query: 121 GDWVCPNPGCANVNFARRVECNKCGTPSPGGASDRSGGGGSGGYNRGGADGGYGGNRNGR 180
GDWVCPNPGC N+NFARRVECNKCG PSPGGASDR GGGG GGYNRGG D GYGG+RNGR
Sbjct: 121 GDWVCPNPGCGNLNFARRVECNKCGAPSPGGASDR-GGGGGGGYNRGGGDSGYGGSRNGR 180
Query: 181 GGSYHGGRSGNHDGGRYEGGNRGGNSYGGHQGGEDSGYSQVPPSSAPPSGGVGGSYPPSY 240
GGS+HGGRSG HDGGR EGG+RGGNSYGGHQGGEDSGY QVPPSSAP SGG+ GSYPPSY
Sbjct: 181 GGSFHGGRSGTHDGGRNEGGSRGGNSYGGHQGGEDSGYGQVPPSSAPSSGGLAGSYPPSY 240
Query: 241 RGGSADYGTDAVPPPASYSGTTYPPTYGGPTGGYGSDGIGDGRSATGRGGPSAGYDGAYN 300
GGSADYGTDAVPPPASYSGTTYPPTYGGPTGGYG D +GDGR A GRGGPS GYDG YN
Sbjct: 241 HGGSADYGTDAVPPPASYSGTTYPPTYGGPTGGYGGDSLGDGRGAAGRGGPSGGYDGGYN 300
Query: 301 AGGKGGGYNAGGRGGGSYNAGGGRGGGYGSTPAAEPAQVKQCDESCDDSCDNSRIYVSNL 360
AGG+ GGYNAGGR GGSYNA GGRGGGYGST AAEPAQVKQCD++CDDSCDNSRIYVSNL
Sbjct: 301 AGGR-GGYNAGGR-GGSYNASGGRGGGYGSTQAAEPAQVKQCDDNCDDSCDNSRIYVSNL 360
Query: 361 PTDVTIDELRELFGGIGQLCLLVLEAFVCDIGSSYSVSSILLAYGASRIDILIGNGLALF 420
P DVTIDELRELFGGIGQ
Sbjct: 361 PPDVTIDELRELFGGIGQ------------------------------------------ 420
Query: 421 LLPINCVSFLKVLNKFFQQWLLHLASDSELLLSISNLKIGRIKQKRGYKDQWPWNIKIYT 480
IGRIKQKRGYKDQWPWNIKIYT
Sbjct: 421 --------------------------------------IGRIKQKRGYKDQWPWNIKIYT 480
Query: 481 DEMGNNKGDACVSYEDPSAAHSAGGFYNNYDLRGHSINVAMAEKSAPRA-PTYNHGGGGR 540
DEMGNNKGDACVSYEDPSAAHSAGGFYNNYDLRG+SINVAMAEKSAPRA PTYNHGGGGR
Sbjct: 481 DEMGNNKGDACVSYEDPSAAHSAGGFYNNYDLRGYSINVAMAEKSAPRAPPTYNHGGGGR 490
Query: 541 GGYGGGGGGDRRRDSYRDGGSGPDRHQHGGNRSRPY 561
GGY GGGGDRRRDSYRDGGSGPDRHQHGGNRSRPY
Sbjct: 541 GGY--GGGGDRRRDSYRDGGSGPDRHQHGGNRSRPY 490
BLAST of CmoCh01G007270 vs. ExPASy TrEMBL
Match:
A0A6J1HM15 (transcription initiation factor TFIID subunit 15b-like OS=Cucurbita moschata OX=3662 GN=LOC111464812 PE=4 SV=1)
HSP 1 Score: 680.6 bits (1755), Expect = 5.4e-192
Identity = 431/582 (74.05%), Postives = 444/582 (76.29%), Query Frame = 0
Query: 1 MSGMYDQGGDAAPSSYGAPGGGGGGYGGGGYGGGGGGYGGKGGDGGYGGGGRGGGGGGRG 60
MSGMYDQGGDAAP SYGAPGGGG G GGGGYGGKGGDGGYGGGGR GGGGGRG
Sbjct: 1 MSGMYDQGGDAAPPSYGAPGGGG--------GYGGGGYGGKGGDGGYGGGGR-GGGGGRG 60
Query: 61 YGGR--GGGGGYGGRGGGGGGGYQGGDRGGRGGGRGGGGGRGGSGRDGDWVCPNPGCANV 120
YGGR GGGGGYGGRGG GGGGYQGGDRGGRG GRGGGGGRGGSGRDGDWVCPNPGC N+
Sbjct: 61 YGGRGGGGGGGYGGRGGSGGGGYQGGDRGGRGSGRGGGGGRGGSGRDGDWVCPNPGCGNL 120
Query: 121 NFARRVECNKCGTPSPGGASDRSG-------------------GGGSGGYNRGGADGGYG 180
NFARRVECNKCG PSPGGAS G GGG GGYNRGG DGGYG
Sbjct: 121 NFARRVECNKCGAPSPGGASGGGGGGGGGGGFNRGGADGGYNRGGGDGGYNRGGGDGGYG 180
Query: 181 GNRNGRGGSYHGGRSGNHDGGRYEGGNRGGNSYGGHQGGEDSGYSQVPPSSAPPSGGVGG 240
GNRNGRGGS+HGGRSG HDGGR EGGNRGGNSYGGHQGGEDSGYSQVPPSSAP SGG+ G
Sbjct: 181 GNRNGRGGSFHGGRSGTHDGGRNEGGNRGGNSYGGHQGGEDSGYSQVPPSSAPSSGGLAG 240
Query: 241 SYPPSYRGGSADYGTDAVPPPASYSGTTYPPTYGGPTGGYGSDGIGDGRSATGRGGPSAG 300
SYPPSY GGSADYGTDAVPPPASYSGTTYPPTYGGP+GGY D +GDGRS+ GRGGPSAG
Sbjct: 241 SYPPSYHGGSADYGTDAVPPPASYSGTTYPPTYGGPSGGYSGDSLGDGRSSAGRGGPSAG 300
Query: 301 YDGAYNAGGKGGGYNAGGRGGGSYNAGGGRGGGYGSTPAAEPAQVKQCDESCDDSCDNSR 360
YDG YNAGG+ GGYN+GGRGGGSYN GGGRGGGYGSTPAAEPAQVKQCD++CDDSCDNSR
Sbjct: 301 YDGGYNAGGR-GGYNSGGRGGGSYNTGGGRGGGYGSTPAAEPAQVKQCDDNCDDSCDNSR 360
Query: 361 IYVSNLPTDVTIDELRELFGGIGQLCLLVLEAFVCDIGSSYSVSSILLAYGASRIDILIG 420
IYVSNLPTDVTIDELRELFGGIGQ
Sbjct: 361 IYVSNLPTDVTIDELRELFGGIGQ------------------------------------ 420
Query: 421 NGLALFLLPINCVSFLKVLNKFFQQWLLHLASDSELLLSISNLKIGRIKQKRGYKDQWPW 480
IGRIKQKRGYKDQWPW
Sbjct: 421 --------------------------------------------IGRIKQKRGYKDQWPW 480
Query: 481 NIKIYTDEMGNNKGDACVSYEDPSAAHSAGGFYNNYDLRGHSINVAMAEKSAPRA-PTYN 540
NIKIYTDEMGNNKGDACVSYEDP AAHSAGGFYNNYDLRG++I+VAMAEKSAPRA PTYN
Sbjct: 481 NIKIYTDEMGNNKGDACVSYEDPQAAHSAGGFYNNYDLRGYNISVAMAEKSAPRAPPTYN 490
Query: 541 HGGGGRGGYGGGGGGDRRRDSYRDGGSGPDRHQHGGNRSRPY 561
HGGGGRGGY GGGGDRRRDSYRDG SGPDRHQHGGNRSRPY
Sbjct: 541 HGGGGRGGY--GGGGDRRRDSYRDGASGPDRHQHGGNRSRPY 490
BLAST of CmoCh01G007270 vs. NCBI nr
Match:
XP_022948284.1 (transcription initiation factor TFIID subunit 15b-like [Cucurbita moschata])
HSP 1 Score: 805.8 bits (2080), Expect = 2.3e-229
Identity = 480/560 (85.71%), Postives = 480/560 (85.71%), Query Frame = 0
Query: 1 MSGMYDQGGDAAPSSYGAPGGGGGGYGGGGYGGGGGGYGGKGGDGGYGGGGRGGGGGGRG 60
MSGMYDQGGDAAPSSYGAPGGGGGGYGGGGYGGGGGGYGGKGGDGGYGGGGRGGGGGGRG
Sbjct: 1 MSGMYDQGGDAAPSSYGAPGGGGGGYGGGGYGGGGGGYGGKGGDGGYGGGGRGGGGGGRG 60
Query: 61 YGGRGGGGGYGGRGGGGGGGYQGGDRGGRGGGRGGGGGRGGSGRDGDWVCPNPGCANVNF 120
YGGRGGGGGYGGRGGGGGGGYQGGDRGGRGGGRGGGGGRGGSGRDGDWVCPNPGCANVNF
Sbjct: 61 YGGRGGGGGYGGRGGGGGGGYQGGDRGGRGGGRGGGGGRGGSGRDGDWVCPNPGCANVNF 120
Query: 121 ARRVECNKCGTPSPGGASDRSGGGGSGGYNRGGADGGYGGNRNGRGGSYHGGRSGNHDGG 180
ARRVECNKCGTPSPGGASDRSGGGGSGGYNRGGADGGYGGNRNGRGGSYHGGRSGNHDGG
Sbjct: 121 ARRVECNKCGTPSPGGASDRSGGGGSGGYNRGGADGGYGGNRNGRGGSYHGGRSGNHDGG 180
Query: 181 RYEGGNRGGNSYGGHQGGEDSGYSQVPPSSAPPSGGVGGSYPPSYRGGSADYGTDAVPPP 240
RYEGGNRGGNSYGGHQGGEDSGYSQVPPSSAPPSGGVGGSYPPSYRGGSADYGTDAVPPP
Sbjct: 181 RYEGGNRGGNSYGGHQGGEDSGYSQVPPSSAPPSGGVGGSYPPSYRGGSADYGTDAVPPP 240
Query: 241 ASYSGTTYPPTYGGPTGGYGSDGIGDGRSATGRGGPSAGYDGAYNAGGKGGGYNAGGRGG 300
ASYSGTTYPPTYGGPTGGYGSDGIGDGRSATGRGGPSAGYDGAYNAGGKGGGYNAGGRGG
Sbjct: 241 ASYSGTTYPPTYGGPTGGYGSDGIGDGRSATGRGGPSAGYDGAYNAGGKGGGYNAGGRGG 300
Query: 301 GSYNAGGGRGGGYGSTPAAEPAQVKQCDESCDDSCDNSRIYVSNLPTDVTIDELRELFGG 360
GSYNAGGGRGGGYGSTPAAEPAQVKQCDESCDDSCDNSRIYVSNLPTDVTIDELRELFGG
Sbjct: 301 GSYNAGGGRGGGYGSTPAAEPAQVKQCDESCDDSCDNSRIYVSNLPTDVTIDELRELFGG 360
Query: 361 IGQLCLLVLEAFVCDIGSSYSVSSILLAYGASRIDILIGNGLALFLLPINCVSFLKVLNK 420
IGQ
Sbjct: 361 IGQ--------------------------------------------------------- 420
Query: 421 FFQQWLLHLASDSELLLSISNLKIGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACVSYE 480
IGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACVSYE
Sbjct: 421 -----------------------IGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACVSYE 480
Query: 481 DPSAAHSAGGFYNNYDLRGHSINVAMAEKSAPRAPTYNHGGGGRGGYGGGGGGDRRRDSY 540
DPSAAHSAGGFYNNYDLRGHSINVAMAEKSAPRAPTYNHGGGGRGGYGGGGGGDRRRDSY
Sbjct: 481 DPSAAHSAGGFYNNYDLRGHSINVAMAEKSAPRAPTYNHGGGGRGGYGGGGGGDRRRDSY 480
Query: 541 RDGGSGPDRHQHGGNRSRPY 561
RDGGSGPDRHQHGGNRSRPY
Sbjct: 541 RDGGSGPDRHQHGGNRSRPY 480
BLAST of CmoCh01G007270 vs. NCBI nr
Match:
KAG7037015.1 (Transcription initiation factor TFIID subunit 15b [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 793.5 bits (2048), Expect = 1.2e-225
Identity = 477/561 (85.03%), Postives = 477/561 (85.03%), Query Frame = 0
Query: 1 MSGMYDQGGDAAPSSYGAPGGGGGGYGGGGYGGGGGGYGGKGGDGGYGGGGRG---GGGG 60
MSGMYDQGGDAAPSSYGAPGGGGGGYGGGGYGGGGGGYGGKGGDGGYGGGGRG GGGG
Sbjct: 1 MSGMYDQGGDAAPSSYGAPGGGGGGYGGGGYGGGGGGYGGKGGDGGYGGGGRGGGSGGGG 60
Query: 61 GRGYGGRGGGGGYGGRGGGGGGGYQGGDRGGRGGGRGGGGGRGGSGRDGDWVCPNPGCAN 120
GRGYGGRGGGGGYGGRGGGGGGGYQGGDRGGRGGGRGGGGGRGGSGRDGDWVCPNPGCAN
Sbjct: 61 GRGYGGRGGGGGYGGRGGGGGGGYQGGDRGGRGGGRGGGGGRGGSGRDGDWVCPNPGCAN 120
Query: 121 VNFARRVECNKCGTPSPGGASDRSGGGGSGGYNRGGADGGYGGNRNGRGGSYHGGRSGNH 180
VNFARRVECNKCGTPSPGGASDRSGGGG GGYNRGGADGGYGGNRNGRGGSYHGGRSGNH
Sbjct: 121 VNFARRVECNKCGTPSPGGASDRSGGGGGGGYNRGGADGGYGGNRNGRGGSYHGGRSGNH 180
Query: 181 DGGRYEGGNRGGNSYGGHQGGEDSGYSQVPPSSAPPSGGVGGSYPPSYRGGSADYGTDAV 240
DGGRYEGGNRGGNSYGGHQGGEDSGYSQVPPSSAPPSGGVGGSYPPSYRGGSADYGTDAV
Sbjct: 181 DGGRYEGGNRGGNSYGGHQGGEDSGYSQVPPSSAPPSGGVGGSYPPSYRGGSADYGTDAV 240
Query: 241 PPPASYSGTTYPPTYGGPTGGYGSDGIGDGRSATGRGGPSAGYDGAYNAGGKGGGYNAGG 300
PPPASYSGTTYPPTYGGPTGGYGSDGIGDGRSATGRGGPSAGYDGAYNAGGKGGGYNAGG
Sbjct: 241 PPPASYSGTTYPPTYGGPTGGYGSDGIGDGRSATGRGGPSAGYDGAYNAGGKGGGYNAGG 300
Query: 301 RGGGSYNAGGGRGGGYGSTPAAEPAQVKQCDESCDDSCDNSRIYVSNLPTDVTIDELREL 360
RGGGSYNAGGGRGGGYGSTPAAEPAQVKQCDESCDDSCDNSRIYVSNLPTDVTIDELREL
Sbjct: 301 RGGGSYNAGGGRGGGYGSTPAAEPAQVKQCDESCDDSCDNSRIYVSNLPTDVTIDELREL 360
Query: 361 FGGIGQLCLLVLEAFVCDIGSSYSVSSILLAYGASRIDILIGNGLALFLLPINCVSFLKV 420
FGGIGQ
Sbjct: 361 FGGIGQ------------------------------------------------------ 420
Query: 421 LNKFFQQWLLHLASDSELLLSISNLKIGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACV 480
IGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACV
Sbjct: 421 --------------------------IGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACV 480
Query: 481 SYEDPSAAHSAGGFYNNYDLRGHSINVAMAEKSAPRAPTYNHGGGGRGGYGGGGGGDRRR 540
SYEDPSAAHSAGGFYNNYDLRGHSINVAMAEKSAPRAPTYNHGGGGRGGYGGGGGGDRRR
Sbjct: 481 SYEDPSAAHSAGGFYNNYDLRGHSINVAMAEKSAPRAPTYNHGGGGRGGYGGGGGGDRRR 481
Query: 541 DSYRDGGSGPDRHQHGGNRSR 559
DSYRDGGSGPDRHQHGGNRSR
Sbjct: 541 DSYRDGGSGPDRHQHGGNRSR 481
BLAST of CmoCh01G007270 vs. NCBI nr
Match:
XP_023523000.1 (transcription initiation factor TFIID subunit 15b-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 783.9 bits (2023), Expect = 9.4e-223
Identity = 475/564 (84.22%), Postives = 477/564 (84.57%), Query Frame = 0
Query: 1 MSGMYDQGGDAAPSSYGAPGGGGGGYGGGGYGGGGGGYGGKGGDGGYGGGGR---GGGGG 60
MSGMYDQGGDAAPSSYGAPGGGGGGYGGGGYGGGGGGYGGKGGDGGYGGGGR GGGGG
Sbjct: 1 MSGMYDQGGDAAPSSYGAPGGGGGGYGGGGYGGGGGGYGGKGGDGGYGGGGRGGGGGGGG 60
Query: 61 GRGYGGRGGGGGYGGRGGGGGGGYQGGDRGGRGGGRGGGGGRGGSGRDGDWVCPNPGCAN 120
GRGYGGRGGGGGYGGRGGGGGGGYQGGDRGGRGGGRGGGGGRGGSGRDGDWVCPNPGCAN
Sbjct: 61 GRGYGGRGGGGGYGGRGGGGGGGYQGGDRGGRGGGRGGGGGRGGSGRDGDWVCPNPGCAN 120
Query: 121 VNFARRVECNKCGTPSPGGASDRS-GGGGSGGYNRGGADGGYGGNRNGRGGSYHGGRSGN 180
VNFARRVECNKCGTPSPGGASDRS GGGG GGYNRGGADGGYGGNRNGRGGSYHGGRSGN
Sbjct: 121 VNFARRVECNKCGTPSPGGASDRSGGGGGGGGYNRGGADGGYGGNRNGRGGSYHGGRSGN 180
Query: 181 HDGGRYEGGNRGGNSYGGHQGGEDSGYSQVPPSSAPPSGGVGGSYPPSYRGGSADYGTDA 240
HDGGRYEGGNRGGNSYGGHQGGEDSG+SQVPPSSAPPSGGVGGSYPPSYRGGSADYGTDA
Sbjct: 181 HDGGRYEGGNRGGNSYGGHQGGEDSGHSQVPPSSAPPSGGVGGSYPPSYRGGSADYGTDA 240
Query: 241 VPPPASYSGTTYPPTYGGPTGGYGSDGIGDGRSATGRGGPSAGYDGAYNAGGKGGGYNAG 300
VPPPASYSGTTYPPTYGGPTGGYG DG+GDGRSATGRGGPSAGYDGAYNAGGKGGGYNAG
Sbjct: 241 VPPPASYSGTTYPPTYGGPTGGYGGDGLGDGRSATGRGGPSAGYDGAYNAGGKGGGYNAG 300
Query: 301 GRGGGSYNAGGGRGGGYGSTPAAEPAQVKQCDESCDDSCDNSRIYVSNLPTDVTIDELRE 360
GRGGGSYNAGGGRGGGYGSTPAAEPAQVKQCDESCDDSCDNSRIYVSNLPTDVTIDELRE
Sbjct: 301 GRGGGSYNAGGGRGGGYGSTPAAEPAQVKQCDESCDDSCDNSRIYVSNLPTDVTIDELRE 360
Query: 361 LFGGIGQLCLLVLEAFVCDIGSSYSVSSILLAYGASRIDILIGNGLALFLLPINCVSFLK 420
LFGGIGQ
Sbjct: 361 LFGGIGQ----------------------------------------------------- 420
Query: 421 VLNKFFQQWLLHLASDSELLLSISNLKIGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDAC 480
IGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDAC
Sbjct: 421 ---------------------------IGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDAC 480
Query: 481 VSYEDPSAAHSAGGFYNNYDLRGHSINVAMAEKSAPRAPTYNHGGGGRGGYGGGGGGDRR 540
VSYEDPSAAHSAGGFYNNYDLRGHSINVAMAEKSAPRAPTYNHGGGGRGGY GGGGGDRR
Sbjct: 481 VSYEDPSAAHSAGGFYNNYDLRGHSINVAMAEKSAPRAPTYNHGGGGRGGY-GGGGGDRR 483
Query: 541 RDSYRDGGSGPDRHQHGGNRSRPY 561
RDSYRDGGSGPDRHQHGGNRSRPY
Sbjct: 541 RDSYRDGGSGPDRHQHGGNRSRPY 483
BLAST of CmoCh01G007270 vs. NCBI nr
Match:
XP_022997960.1 (transcription initiation factor TFIID subunit 15b [Cucurbita maxima])
HSP 1 Score: 777.7 bits (2007), Expect = 6.7e-221
Identity = 470/563 (83.48%), Postives = 473/563 (84.01%), Query Frame = 0
Query: 1 MSGMYDQGGDAAPSSYGAPGGGGGGYGGGGYGGGGGGYGGKGGDGGYGGGGR---GGGGG 60
MSGMYDQGGDAAPSSYGAPGGGGGGYGGGGY GGGYGGKGGDGGYGGGGR GGGGG
Sbjct: 1 MSGMYDQGGDAAPSSYGAPGGGGGGYGGGGY---GGGYGGKGGDGGYGGGGRGGGGGGGG 60
Query: 61 GRGYGGRGGGGGYGGRGGGGGGGYQGGDRGGRGGGRGGGGGRGGSGRDGDWVCPNPGCAN 120
GRGYGGRGGGGGYGGRGGGGGGGYQGGDRGGRGGGRGGGGGRGGSGRDGDWVCPNPGCAN
Sbjct: 61 GRGYGGRGGGGGYGGRGGGGGGGYQGGDRGGRGGGRGGGGGRGGSGRDGDWVCPNPGCAN 120
Query: 121 VNFARRVECNKCGTPSPGGASDRSGGGGSGGYNRGGADGGYGGNRNGRGGSYHGGRSGNH 180
VNFARRVECNKCGTPSPGGASDRSGGGG GGYNRGGADGGYGGNRNGRGGSYHGGRSGNH
Sbjct: 121 VNFARRVECNKCGTPSPGGASDRSGGGGGGGYNRGGADGGYGGNRNGRGGSYHGGRSGNH 180
Query: 181 DGGRYEGGNRGGNSYGGHQGGEDSGYSQVPPSSAPPSGGVGGSYPPSYRGGSADYGTDAV 240
DGGRYEGGNRGGNSYGGHQGGEDSGYSQVPPSSAPPSGGVGGSYPPS+ GGSA+YGTDAV
Sbjct: 181 DGGRYEGGNRGGNSYGGHQGGEDSGYSQVPPSSAPPSGGVGGSYPPSFHGGSANYGTDAV 240
Query: 241 PPPASYSGTTYPPTYGGPTGGYGSDGIGDGRSATGRGGPSAGYDGAYNAGGKGGGYNAGG 300
PPPASYSG+TYPPTYGGPTGGYG DGIGDGRSATGRGGPSAGYDGAYNAGGKGGGYNAGG
Sbjct: 241 PPPASYSGSTYPPTYGGPTGGYGGDGIGDGRSATGRGGPSAGYDGAYNAGGKGGGYNAGG 300
Query: 301 RGGGSYNAGGGRGGGYGSTPAAEPAQVKQCDESCDDSCDNSRIYVSNLPTDVTIDELREL 360
RGGGSYNAGGGRGGGYGSTPAAEPAQVKQCDESCDDSCDNSRIYVSNLPTDVTIDELREL
Sbjct: 301 RGGGSYNAGGGRGGGYGSTPAAEPAQVKQCDESCDDSCDNSRIYVSNLPTDVTIDELREL 360
Query: 361 FGGIGQLCLLVLEAFVCDIGSSYSVSSILLAYGASRIDILIGNGLALFLLPINCVSFLKV 420
FGGIGQ
Sbjct: 361 FGGIGQ------------------------------------------------------ 420
Query: 421 LNKFFQQWLLHLASDSELLLSISNLKIGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACV 480
IGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACV
Sbjct: 421 --------------------------IGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACV 479
Query: 481 SYEDPSAAHSAGGFYNNYDLRGHSINVAMAEKSAPRAPTYNHGGGGRGGYGGGGGGDRRR 540
SYEDPSAAHSAGGFYNNYDLRGHSINVAMAEKSAPRAPTYNHGGGGRGGY GGGGGDRRR
Sbjct: 481 SYEDPSAAHSAGGFYNNYDLRGHSINVAMAEKSAPRAPTYNHGGGGRGGY-GGGGGDRRR 479
Query: 541 DSYRDGGSGPDRHQHGGNRSRPY 561
DSYRDGGSGPDRHQHGGNRSRPY
Sbjct: 541 DSYRDGGSGPDRHQHGGNRSRPY 479
BLAST of CmoCh01G007270 vs. NCBI nr
Match:
KAG6607338.1 (Transcription initiation factor TFIID subunit 15b, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 738.8 bits (1906), Expect = 3.5e-209
Identity = 447/531 (84.18%), Postives = 447/531 (84.18%), Query Frame = 0
Query: 1 MSGMYDQGGDAAPSSYGAPGGGGGGYGGGGYGGGGGGYGGKGGDGGYGGGGRG---GGGG 60
MSGMYDQGGDAAPSSYGAPGGGGGGYGGGGYGGGGGGYGGKGGDGGYGGGGRG GGGG
Sbjct: 1 MSGMYDQGGDAAPSSYGAPGGGGGGYGGGGYGGGGGGYGGKGGDGGYGGGGRGGGSGGGG 60
Query: 61 GRGYGGRGGGGGYGGRGGGGGGGYQGGDRGGRGGGRGGGGGRGGSGRDGDWVCPNPGCAN 120
GRGYGGRGGGGGYGGRGGGGGGGYQGGDRGGRGGGRGGGGGRGGSGRDGDWVCPNPGCAN
Sbjct: 61 GRGYGGRGGGGGYGGRGGGGGGGYQGGDRGGRGGGRGGGGGRGGSGRDGDWVCPNPGCAN 120
Query: 121 VNFARRVECNKCGTPSPGGASDRSGGGGSGGYNRGGADGGYGGNRNGRGGSYHGGRSGNH 180
VNFARRVECNKCGTPSPGGASDRSGGGG GGYNRGGADGGYGGNRNGRGGSYHGGRSGNH
Sbjct: 121 VNFARRVECNKCGTPSPGGASDRSGGGGGGGYNRGGADGGYGGNRNGRGGSYHGGRSGNH 180
Query: 181 DGGRYEGGNRGGNSYGGHQGGEDSGYSQVPPSSAPPSGGVGGSYPPSYRGGSADYGTDAV 240
DGGRYEGGNRGGNSYGGHQGGEDSGYSQVPPSSAPPSGGVGGSYPPSYRGGSADYGTDAV
Sbjct: 181 DGGRYEGGNRGGNSYGGHQGGEDSGYSQVPPSSAPPSGGVGGSYPPSYRGGSADYGTDAV 240
Query: 241 PPPASYSGTTYPPTYGGPTGGYGSDGIGDGRSATGRGGPSAGYDGAYNAGGKGGGYNAGG 300
PPPASYSGTTYPPTYGGPTGGYGSDGIGDGRSATGRGGPSAGYDGAYNAGGKGGGYNAGG
Sbjct: 241 PPPASYSGTTYPPTYGGPTGGYGSDGIGDGRSATGRGGPSAGYDGAYNAGGKGGGYNAGG 300
Query: 301 RGGGSYNAGGGRGGGYGSTPAAEPAQVKQCDESCDDSCDNSRIYVSNLPTDVTIDELREL 360
RGGGSYNAGGGRGGGYGSTPAAEPAQVKQCDESCDDSCDNSRIYVSNLPTDVTIDELREL
Sbjct: 301 RGGGSYNAGGGRGGGYGSTPAAEPAQVKQCDESCDDSCDNSRIYVSNLPTDVTIDELREL 360
Query: 361 FGGIGQLCLLVLEAFVCDIGSSYSVSSILLAYGASRIDILIGNGLALFLLPINCVSFLKV 420
FGGIGQ
Sbjct: 361 FGGIGQ------------------------------------------------------ 420
Query: 421 LNKFFQQWLLHLASDSELLLSISNLKIGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACV 480
IGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACV
Sbjct: 421 --------------------------IGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACV 451
Query: 481 SYEDPSAAHSAGGFYNNYDLRGHSINVAMAEKSAPRAPTYNHGGGGRGGYG 529
SYEDPSAAHSAGGFYNNYDLRGHSINVAMAEKSAPRAPTYNHGGGGRGGYG
Sbjct: 481 SYEDPSAAHSAGGFYNNYDLRGHSINVAMAEKSAPRAPTYNHGGGGRGGYG 451
BLAST of CmoCh01G007270 vs. TAIR 10
Match:
AT5G58470.1 (TBP-associated factor 15B )
HSP 1 Score: 324.3 bits (830), Expect = 1.9e-88
Identity = 290/568 (51.06%), Postives = 324/568 (57.04%), Query Frame = 0
Query: 1 MSGMYDQGGDAAPSSYGAPGGGG--GGYGGGGYGGGGGGYGGKGGDGGYGGGGRGGGGGG 60
M+GMY+Q G GGG YGG GY GGGGGYG GGD GYGG G GGG
Sbjct: 1 MAGMYNQDG----------GGGAPIPSYGGDGY-GGGGGYG--GGDAGYGGRGASGGG-- 60
Query: 61 RGYGGRGGGGGYGGRG--GGGGGGYQGGDRGGRGGGRGGGGGRGGSGRDGDWVCPNPGCA 120
YGGRGG GG GGRG GGGGGGYQGGDRGGRG GG GRDGDW CPNP C
Sbjct: 61 -SYGGRGGYGGGGGRGNRGGGGGGYQGGDRGGRGS--------GGGGRDGDWRCPNPSCG 120
Query: 121 NVNFARRVECNKCGTPSPGGASDRSGGGGSGGYNRGGADGGYGGNRNGRGGSYHGGRSGN 180
NVNFARRVECNKCG +P G S + G GGY+RGG D GG GRGG GRS
Sbjct: 121 NVNFARRVECNKCGALAPSGTSSGANDRGGGGYSRGGGDSDRGG---GRGGRNDSGRS-- 180
Query: 181 HDGGRYEGGNRGGNSYGGHQGGEDSGYSQV-PPSSAPPSGGVGGSYPPSYRGGSADYGTD 240
++ RY+GG+R G SYG E+ Y Q PP++A PS GSYPP YG +
Sbjct: 181 YESSRYDGGSRSGGSYGSGSQRENGSYGQAPPPAAAIPSYDGSGSYPP-----PTGYGME 240
Query: 241 AVPPPASYSGTTYPPTYGGPTGGYGSDGIGDGRSATGRGGPSAGYDGAYNAGGKGGGYNA 300
AVPPP SYSG PP+YGGP GGYGSD G GRGG S GYDG +A
Sbjct: 241 AVPPPTSYSGG--PPSYGGPRGGYGSDAPSTG----GRGGRSGGYDGG----------SA 300
Query: 301 GGRGGGSYNAGGGRGGGYGSTPAAEPAQVKQCDESCDDSCDNSRIYVSNLPTDVTIDELR 360
R SY A +VKQCD CDD+CDN+RIY+SNLP DVT DEL+
Sbjct: 301 PRRQEASYE-------------DAATEKVKQCDADCDDNCDNARIYISNLPPDVTTDELK 360
Query: 361 ELFGGIGQLCLLVLEAFVCDIGSSYSVSSILLAYGASRIDILIGNGLALFLLPINCVSFL 420
+LFGGIGQ
Sbjct: 361 DLFGGIGQ---------------------------------------------------- 420
Query: 421 KVLNKFFQQWLLHLASDSELLLSISNLKIGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDA 480
+GRIKQKRGYKDQWP+NIKIYTDE GN KGDA
Sbjct: 421 ----------------------------VGRIKQKRGYKDQWPYNIKIYTDEKGNYKGDA 422
Query: 481 CVSYEDPSAAHSAGGFYNNYDLRGHSINVAMAEKSAPRAPTYNHGGGGRGGYG---GGGG 540
C++YEDPSAAHSAGGF+NNY++RG+ I+V MAEKSAPRAPT++ GGGRGG G GGGG
Sbjct: 481 CLAYEDPSAAHSAGGFFNNYEMRGNKISVTMAEKSAPRAPTFDQRGGGRGGGGGGYGGGG 422
Query: 541 GDRRRDSYRDGGSGPDRHQHGGNRSRPY 561
GDRRRD+Y SGPDR+ HGGNRSRPY
Sbjct: 541 GDRRRDNY---SSGPDRNHHGGNRSRPY 422
BLAST of CmoCh01G007270 vs. TAIR 10
Match:
AT5G58470.2 (TBP-associated factor 15B )
HSP 1 Score: 324.3 bits (830), Expect = 1.9e-88
Identity = 290/568 (51.06%), Postives = 324/568 (57.04%), Query Frame = 0
Query: 1 MSGMYDQGGDAAPSSYGAPGGGG--GGYGGGGYGGGGGGYGGKGGDGGYGGGGRGGGGGG 60
M+GMY+Q G GGG YGG GY GGGGGYG GGD GYGG G GGG
Sbjct: 1 MAGMYNQDG----------GGGAPIPSYGGDGY-GGGGGYG--GGDAGYGGRGASGGG-- 60
Query: 61 RGYGGRGGGGGYGGRG--GGGGGGYQGGDRGGRGGGRGGGGGRGGSGRDGDWVCPNPGCA 120
YGGRGG GG GGRG GGGGGGYQGGDRGGRG GG GRDGDW CPNP C
Sbjct: 61 -SYGGRGGYGGGGGRGNRGGGGGGYQGGDRGGRGS--------GGGGRDGDWRCPNPSCG 120
Query: 121 NVNFARRVECNKCGTPSPGGASDRSGGGGSGGYNRGGADGGYGGNRNGRGGSYHGGRSGN 180
NVNFARRVECNKCG +P G S + G GGY+RGG D GG GRGG GRS
Sbjct: 121 NVNFARRVECNKCGALAPSGTSSGANDRGGGGYSRGGGDSDRGG---GRGGRNDSGRS-- 180
Query: 181 HDGGRYEGGNRGGNSYGGHQGGEDSGYSQV-PPSSAPPSGGVGGSYPPSYRGGSADYGTD 240
++ RY+GG+R G SYG E+ Y Q PP++A PS GSYPP YG +
Sbjct: 181 YESSRYDGGSRSGGSYGSGSQRENGSYGQAPPPAAAIPSYDGSGSYPP-----PTGYGME 240
Query: 241 AVPPPASYSGTTYPPTYGGPTGGYGSDGIGDGRSATGRGGPSAGYDGAYNAGGKGGGYNA 300
AVPPP SYSG PP+YGGP GGYGSD G GRGG S GYDG +A
Sbjct: 241 AVPPPTSYSGG--PPSYGGPRGGYGSDAPSTG----GRGGRSGGYDGG----------SA 300
Query: 301 GGRGGGSYNAGGGRGGGYGSTPAAEPAQVKQCDESCDDSCDNSRIYVSNLPTDVTIDELR 360
R SY A +VKQCD CDD+CDN+RIY+SNLP DVT DEL+
Sbjct: 301 PRRQEASYE-------------DAATEKVKQCDADCDDNCDNARIYISNLPPDVTTDELK 360
Query: 361 ELFGGIGQLCLLVLEAFVCDIGSSYSVSSILLAYGASRIDILIGNGLALFLLPINCVSFL 420
+LFGGIGQ
Sbjct: 361 DLFGGIGQ---------------------------------------------------- 420
Query: 421 KVLNKFFQQWLLHLASDSELLLSISNLKIGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDA 480
+GRIKQKRGYKDQWP+NIKIYTDE GN KGDA
Sbjct: 421 ----------------------------VGRIKQKRGYKDQWPYNIKIYTDEKGNYKGDA 422
Query: 481 CVSYEDPSAAHSAGGFYNNYDLRGHSINVAMAEKSAPRAPTYNHGGGGRGGYG---GGGG 540
C++YEDPSAAHSAGGF+NNY++RG+ I+V MAEKSAPRAPT++ GGGRGG G GGGG
Sbjct: 481 CLAYEDPSAAHSAGGFFNNYEMRGNKISVTMAEKSAPRAPTFDQRGGGRGGGGGGYGGGG 422
Query: 541 GDRRRDSYRDGGSGPDRHQHGGNRSRPY 561
GDRRRD+Y SGPDR+ HGGNRSRPY
Sbjct: 541 GDRRRDNY---SSGPDRNHHGGNRSRPY 422
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q94KD0 | 2.7e-87 | 51.06 | Transcription initiation factor TFIID subunit 15b OS=Arabidopsis thaliana OX=370... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1G9F8 | 1.1e-229 | 85.71 | transcription initiation factor TFIID subunit 15b-like OS=Cucurbita moschata OX=... | [more] |
A0A6J1KBD1 | 3.3e-221 | 83.48 | transcription initiation factor TFIID subunit 15b OS=Cucurbita maxima OX=3661 GN... | [more] |
A0A0A0LYC4 | 1.9e-192 | 76.39 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G533590 PE=4 SV=1 | [more] |
A0A1S3C4S9 | 3.2e-192 | 76.74 | transcription initiation factor TFIID subunit 15b isoform X1 OS=Cucumis melo OX=... | [more] |
A0A6J1HM15 | 5.4e-192 | 74.05 | transcription initiation factor TFIID subunit 15b-like OS=Cucurbita moschata OX=... | [more] |
Match Name | E-value | Identity | Description | |
XP_022948284.1 | 2.3e-229 | 85.71 | transcription initiation factor TFIID subunit 15b-like [Cucurbita moschata] | [more] |
KAG7037015.1 | 1.2e-225 | 85.03 | Transcription initiation factor TFIID subunit 15b [Cucurbita argyrosperma subsp.... | [more] |
XP_023523000.1 | 9.4e-223 | 84.22 | transcription initiation factor TFIID subunit 15b-like [Cucurbita pepo subsp. pe... | [more] |
XP_022997960.1 | 6.7e-221 | 83.48 | transcription initiation factor TFIID subunit 15b [Cucurbita maxima] | [more] |
KAG6607338.1 | 3.5e-209 | 84.18 | Transcription initiation factor TFIID subunit 15b, partial [Cucurbita argyrosper... | [more] |