CmoCh01G007140 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh01G007140
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	RING-H2 finger protein ATL63-like
Location	Cmo_Chr01: 3659869 .. 3660612 (+)
RNA-Seq Expression	CmoCh01G007140
Synteny	CmoCh01G007140

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGTTCAATTCCACTTCACTCTCTGATTTCACTCAGAGCATTTTCTCCTACAACAGCAACGTCATTCTCGCCGCTCTCATATCTCTTCTCCTCGTCGTCCTCTTTGTCCTTCTCCTCCATGCCTACGCCAATTGTTTCTTCCCTCGGCCTCGCCACCGCCATGCTCAGCGGAGTTCCGTCACTGTCTCCTACGTCCTTGGACCGCCTCGCCTCTCGCGTTTCGAATCGATTCCGTTCGATTTAGGCTTCGCTCAGTCGAAAGGTCTTGACTCGTCTGTAATCTCTGCGATTCCGCTGTTCGTTTATGAATCGGAGGAGAAGAAGTGTGCAACGGTGATGGAGTGCGTGATTTGCCTCAGTGAATTTGAGGAACGAGAAATCGGACGACGGTTGCCGATATGTAACCATGGATTTCACCTTGAATGTATCGATATGTGGTTGAATTCTCACGCGAATTGTCCTGTTTGTAGAGCGCCAGTAGTCGCAGAGGCGGTGGAATCTGGCCGGTTGAGCGGCGAGAGGGAAATCGGAGAAGAGATTGTAACGGAGGAGCGGACTAATTGTGAGATTCAGAGAAACGAGGAGCAAAACGGTCAGTTTCATTCTTCTTCTTCCTCTTCAAGTTCTTCGACTGATCCGCCATTGATGTCGCTTGGAGCATCTTTGAAGCGAATGTTGAGTAGAAACAGATCGAATGGAAGGATTTTCCCCTCTTCCAATGGCGATGAATTAAATGTTTGA

mRNA sequence

ATGGCGTTCAATTCCACTTCACTCTCTGATTTCACTCAGAGCATTTTCTCCTACAACAGCAACGTCATTCTCGCCGCTCTCATATCTCTTCTCCTCGTCGTCCTCTTTGTCCTTCTCCTCCATGCCTACGCCAATTGTTTCTTCCCTCGGCCTCGCCACCGCCATGCTCAGCGGAGTTCCGTCACTGTCTCCTACGTCCTTGGACCGCCTCGCCTCTCGCGTTTCGAATCGATTCCGTTCGATTTAGGCTTCGCTCAGTCGAAAGGTCTTGACTCGTCTGTAATCTCTGCGATTCCGCTGTTCGTTTATGAATCGGAGGAGAAGAAGTGTGCAACGGTGATGGAGTGCGTGATTTGCCTCAGTGAATTTGAGGAACGAGAAATCGGACGACGGTTGCCGATATGTAACCATGGATTTCACCTTGAATGTATCGATATGTGGTTGAATTCTCACGCGAATTGTCCTGTTTGTAGAGCGCCAGTAGTCGCAGAGGCGGTGGAATCTGGCCGGTTGAGCGGCGAGAGGGAAATCGGAGAAGAGATTGTAACGGAGGAGCGGACTAATTGTGAGATTCAGAGAAACGAGGAGCAAAACGGTCAGTTTCATTCTTCTTCTTCCTCTTCAAGTTCTTCGACTGATCCGCCATTGATGTCGCTTGGAGCATCTTTGAAGCGAATGTTGAGTAGAAACAGATCGAATGGAAGGATTTTCCCCTCTTCCAATGGCGATGAATTAAATGTTTGA

Coding sequence (CDS)

ATGGCGTTCAATTCCACTTCACTCTCTGATTTCACTCAGAGCATTTTCTCCTACAACAGCAACGTCATTCTCGCCGCTCTCATATCTCTTCTCCTCGTCGTCCTCTTTGTCCTTCTCCTCCATGCCTACGCCAATTGTTTCTTCCCTCGGCCTCGCCACCGCCATGCTCAGCGGAGTTCCGTCACTGTCTCCTACGTCCTTGGACCGCCTCGCCTCTCGCGTTTCGAATCGATTCCGTTCGATTTAGGCTTCGCTCAGTCGAAAGGTCTTGACTCGTCTGTAATCTCTGCGATTCCGCTGTTCGTTTATGAATCGGAGGAGAAGAAGTGTGCAACGGTGATGGAGTGCGTGATTTGCCTCAGTGAATTTGAGGAACGAGAAATCGGACGACGGTTGCCGATATGTAACCATGGATTTCACCTTGAATGTATCGATATGTGGTTGAATTCTCACGCGAATTGTCCTGTTTGTAGAGCGCCAGTAGTCGCAGAGGCGGTGGAATCTGGCCGGTTGAGCGGCGAGAGGGAAATCGGAGAAGAGATTGTAACGGAGGAGCGGACTAATTGTGAGATTCAGAGAAACGAGGAGCAAAACGGTCAGTTTCATTCTTCTTCTTCCTCTTCAAGTTCTTCGACTGATCCGCCATTGATGTCGCTTGGAGCATCTTTGAAGCGAATGTTGAGTAGAAACAGATCGAATGGAAGGATTTTCCCCTCTTCCAATGGCGATGAATTAAATGTTTGA

Protein sequence

MAFNSTSLSDFTQSIFSYNSNVILAALISLLLVVLFVLLLHAYANCFFPRPRHRHAQRSSVTVSYVLGPPRLSRFESIPFDLGFAQSKGLDSSVISAIPLFVYESEEKKCATVMECVICLSEFEEREIGRRLPICNHGFHLECIDMWLNSHANCPVCRAPVVAEAVESGRLSGEREIGEEIVTEERTNCEIQRNEEQNGQFHSSSSSSSSSTDPPLMSLGASLKRMLSRNRSNGRIFPSSNGDELNV

Homology

[Close]

BLAST of CmoCh01G007140 vs. ExPASy Swiss-Prot
Match: Q9LUZ9 (RING-H2 finger protein ATL63 OS=Arabidopsis thaliana OX=3702 GN=ATL63 PE=2 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 2.0e-34
Identity = 114/297 (38.38%), Postives = 155/297 (52.19%), Query Frame = 0


Query: 6   TSLSDFTQSIFSYNSNVILAALISLLLVVLFVLLLHAYANCFFP------------RPRH 65
           +SLS F + + SYNSNV+LAAL+ LLLVVLFVLLLH YA  F+             R R 
Sbjct: 13  SSLSSFLKILSSYNSNVLLAALVFLLLVVLFVLLLHFYARFFWSPSHQDFSAAARHRRRR 72

Query: 66  RHAQRSSVTVSYVLGPPRLSRFE---SIPFDLGFAQSKGLDSSVISAIPLFVYESEEKKC 125
           R  +R +VT + ++    L  F+   S P        KGLDSSVIS+IPLFVYE  E++ 
Sbjct: 73  RRNRRRTVTTTRIIPSLPLGGFDDGVSSPAATATRDDKGLDSSVISSIPLFVYEENEEEE 132

Query: 126 ATVMECVICLSEFEEREIGRRLPICNHGFHLECIDMWLNSHANCPVCRAPVVA------- 185
               ECVICL  +E  + GR+L  C HGFH+ECIDMWL+SH+ CP+CR+PV+A       
Sbjct: 133 DEEEECVICLGLWEAGDFGRKLRNCGHGFHVECIDMWLSSHSTCPLCRSPVLAAVSDEEN 192

Query: 186 -----EAVE---------------SGRLSGEREIG-------EEIVT-----EERTNCEI 244
                 AVE                  +SG+R +        +++ T     EE    E+
Sbjct: 193 LKLAVNAVEEEAEVRLQMSPAGENESNVSGDRRVSLSLSVMEDDLKTGDDDGEEEVRIEV 252

[Close]

BLAST of CmoCh01G007140 vs. ExPASy Swiss-Prot
Match: Q8L9T5 (RING-H2 finger protein ATL2 OS=Arabidopsis thaliana OX=3702 GN=ATL2 PE=2 SV=2)

HSP 1 Score: 111.3 bits (277), Expect = 1.6e-23
Identity = 69/203 (33.99%), Postives = 109/203 (53.69%), Query Frame = 0


Query: 16  FSYNSNVILAALISLLLVVLFVLLLHAYANCFFPRPRHRHAQRSS----VTVSYVLGPPR 75
           ++ +  ++L+A++ L  VV+ ++ LH YA  +  R R RH +R S     T+ +    P 
Sbjct: 24  YAMSGKIMLSAIVILFFVVILMVFLHLYARWYLLRARRRHLRRRSRNRRATMVFFTADPS 83

Query: 76  LSRFESIPFDLGFAQSKGLDSSVISAIPLFVYESEEKKCATVMECVICLSEFEEREIGRR 135
            +    +        S+GLD +VI ++P+F +  E  K    +EC +CLSEFEE E GR 
Sbjct: 84  TAATSVV-------ASRGLDPNVIKSLPVFTFSDETHK--DPIECAVCLSEFEESETGRV 143

Query: 136 LPICNHGFHLECIDMWLNSHANCPVCRAPVVAEA-VESGRLSGEREIGEEIVTEERTNCE 195
           LP C H FH++CIDMW +SH+ CP+CR+ V + A +ES   + ERE+   + ++     E
Sbjct: 144 LPNCQHTFHVDCIDMWFHSHSTCPLCRSLVESLAGIESTAAAREREVVIAVDSDPVLVIE 203

Query: 196 IQRNEEQNGQFHSSSSSSSSSTD 214
              +     + H S SS     D
Sbjct: 204 PSSSSGLTDEPHGSGSSQMLRED 217

[Close]

BLAST of CmoCh01G007140 vs. ExPASy Swiss-Prot
Match: O22255 (RING-H2 finger protein ATL64 OS=Arabidopsis thaliana OX=3702 GN=ATL64 PE=2 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 1.9e-21
Identity = 61/169 (36.09%), Postives = 89/169 (52.66%), Query Frame = 0


Query: 12  TQSIFSYNSNVILAALISLLLVVLFVLLLHAYANCFFPRPRHRHAQRSSVTVSYVLGPPR 71
           T S ++ N  ++L+++I L + V+ +L  H+YA   F R   R  +R    +  +   PR
Sbjct: 18  TSSGYALNGKIMLSSVIVLFVAVIMILCFHSYARWLFRRHNRRIRRRIRSHLRTLSASPR 77

Query: 72  LSRFESIPFDLGFAQSKGLDSSVISAIPLFVYES------EEKKCATVMECVICLSEFEE 131
                           + LD +V+  IP+FVY S      EEK+     EC +CLSEFEE
Sbjct: 78  ---------------DQALDQAVLDKIPIFVYSSKNPPPPEEKE-----ECSVCLSEFEE 137

Query: 132 REIGRRLPICNHGFHLECIDMWLNSHANCPVCRAPVVA--EAVESGRLS 173
            + GR LP C H FH++CID W  S + CP+CRAPV    + +E+G  S
Sbjct: 138 EDEGRLLPKCGHSFHVDCIDTWFRSRSTCPLCRAPVQPPFQVIETGSSS 166

[Close]

BLAST of CmoCh01G007140 vs. ExPASy Swiss-Prot
Match: Q9LZJ6 (RING-H2 finger protein ATL5 OS=Arabidopsis thaliana OX=3702 GN=ATL5 PE=2 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 4.7e-20
Identity = 55/148 (37.16%), Postives = 83/148 (56.08%), Query Frame = 0


Query: 14  SIFSYNSNVILAALISLLLVVLFVLLLHAYANCFFPRPRHRHAQRSSVTVSYVLGPPRLS 73
           S +S N  ++LA++I L + V+ +L  H+YA   F R   R  +R S  +  +      +
Sbjct: 20  SRYSLNGKIMLASVIILFVAVILILCFHSYARWLFRRQNRRIRRRISAHLRSLAAARDPT 79

Query: 74  RFESIPFDLGFAQSKGLDSSVISAIPLFVYESEEKKCATVMECVICLSEFEEREIGRRLP 133
           +  S            LD +V+  IP+FVY  +  + + + EC +CLSEFEE + GR LP
Sbjct: 80  QSSS--------SLSPLDPTVLEKIPIFVYSVKTHE-SPLEECSVCLSEFEEDDEGRVLP 139

Query: 134 ICNHGFHLECIDMWLNSHANCPVCRAPV 162
            C H FH++CID W  S ++CP+CRAPV
Sbjct: 140 KCGHVFHVDCIDTWFRSRSSCPLCRAPV 158

[Close]

BLAST of CmoCh01G007140 vs. ExPASy Swiss-Prot
Match: Q9XF63 (RING-H2 finger protein ATL3 OS=Arabidopsis thaliana OX=3702 GN=ATL3 PE=2 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 5.2e-19
Identity = 56/162 (34.57%), Postives = 85/162 (52.47%), Query Frame = 0


Query: 20  SNVILAALISLLLVVLFVLLLHAYANCFFPR-------PRHRHAQRSSVTVSYVLGPPRL 79
           S +IL A+I L + VLFVL+LH YA  ++ R        + +  ++        + PP +
Sbjct: 22  SKIILTAIIVLFMAVLFVLILHLYAKLYWWRIDQLQQQQQQQQQEQEQEEDQSSIAPPVV 81

Query: 80  SRFESIPFDLGFAQ----SKGLDSSVISAIPLFVYESEEKKCATVMECVICLSEFEEREI 139
           +R +   F     Q    + GL S  +S++P+  +  +   C   +EC ICLSE  + + 
Sbjct: 82  TRRQRRRFIFVPGQDALSNTGLTSFELSSLPIVFFRQD--SCKDGLECSICLSELVKGDK 141

Query: 140 GRRLPICNHGFHLECIDMWLNSHANCPVCRAPVVAEAVESGR 171
            R LP CNH FH+ECIDMW  SH+ CP+CR  V+     S +
Sbjct: 142 ARLLPKCNHSFHVECIDMWFQSHSTCPICRNTVLGPEQASSK 181

[Close]

BLAST of CmoCh01G007140 vs. ExPASy TrEMBL
Match: A0A6J1GBH1 (RING-H2 finger protein ATL63-like OS=Cucurbita moschata OX=3662 GN=LOC111452651 PE=4 SV=1)

HSP 1 Score: 478.8 bits (1231), Expect = 1.4e-131
Identity = 247/247 (100.00%), Postives = 247/247 (100.00%), Query Frame = 0


Query: 1   MAFNSTSLSDFTQSIFSYNSNVILAALISLLLVVLFVLLLHAYANCFFPRPRHRHAQRSS 60
           MAFNSTSLSDFTQSIFSYNSNVILAALISLLLVVLFVLLLHAYANCFFPRPRHRHAQRSS
Sbjct: 1   MAFNSTSLSDFTQSIFSYNSNVILAALISLLLVVLFVLLLHAYANCFFPRPRHRHAQRSS 60

Query: 61  VTVSYVLGPPRLSRFESIPFDLGFAQSKGLDSSVISAIPLFVYESEEKKCATVMECVICL 120
           VTVSYVLGPPRLSRFESIPFDLGFAQSKGLDSSVISAIPLFVYESEEKKCATVMECVICL
Sbjct: 61  VTVSYVLGPPRLSRFESIPFDLGFAQSKGLDSSVISAIPLFVYESEEKKCATVMECVICL 120

Query: 121 SEFEEREIGRRLPICNHGFHLECIDMWLNSHANCPVCRAPVVAEAVESGRLSGEREIGEE 180
           SEFEEREIGRRLPICNHGFHLECIDMWLNSHANCPVCRAPVVAEAVESGRLSGEREIGEE
Sbjct: 121 SEFEEREIGRRLPICNHGFHLECIDMWLNSHANCPVCRAPVVAEAVESGRLSGEREIGEE 180

Query: 181 IVTEERTNCEIQRNEEQNGQFHSSSSSSSSSTDPPLMSLGASLKRMLSRNRSNGRIFPSS 240
           IVTEERTNCEIQRNEEQNGQFHSSSSSSSSSTDPPLMSLGASLKRMLSRNRSNGRIFPSS
Sbjct: 181 IVTEERTNCEIQRNEEQNGQFHSSSSSSSSSTDPPLMSLGASLKRMLSRNRSNGRIFPSS 240

Query: 241 NGDELNV 248
           NGDELNV
Sbjct: 241 NGDELNV 247

[Close]

BLAST of CmoCh01G007140 vs. ExPASy TrEMBL
Match: A0A6J1KH83 (RING-H2 finger protein ATL63-like OS=Cucurbita maxima OX=3661 GN=LOC111493195 PE=4 SV=1)

HSP 1 Score: 471.5 bits (1212), Expect = 2.2e-129
Identity = 242/247 (97.98%), Postives = 245/247 (99.19%), Query Frame = 0


Query: 1   MAFNSTSLSDFTQSIFSYNSNVILAALISLLLVVLFVLLLHAYANCFFPRPRHRHAQRSS 60
           MAFNSTSLSDFTQSIFSYNSNVILAALISLLLVVLFVLLLHAYANCFFPRPRHRHAQRSS
Sbjct: 1   MAFNSTSLSDFTQSIFSYNSNVILAALISLLLVVLFVLLLHAYANCFFPRPRHRHAQRSS 60

Query: 61  VTVSYVLGPPRLSRFESIPFDLGFAQSKGLDSSVISAIPLFVYESEEKKCATVMECVICL 120
           VTVSYVLGPPRLSRF+SIPFDLGFAQSKGLDSSVIS IPLFVYESEEKKCATVMECVICL
Sbjct: 61  VTVSYVLGPPRLSRFDSIPFDLGFAQSKGLDSSVISTIPLFVYESEEKKCATVMECVICL 120

Query: 121 SEFEEREIGRRLPICNHGFHLECIDMWLNSHANCPVCRAPVVAEAVESGRLSGEREIGEE 180
           SEFEEREIGRRLPICNHGFHL+CIDMWLNSHANCPVCRAPVVAEAVES RLSGEREIGEE
Sbjct: 121 SEFEEREIGRRLPICNHGFHLDCIDMWLNSHANCPVCRAPVVAEAVESSRLSGEREIGEE 180

Query: 181 IVTEERTNCEIQRNEEQNGQFHSSSSSSSSSTDPPLMSLGASLKRMLSRNRSNGRIFPSS 240
           IVTEERTNCEIQRNEEQNGQFHSSSSSS+SSTDPPLMSLGASLKRMLSRNRSNGRIFPSS
Sbjct: 181 IVTEERTNCEIQRNEEQNGQFHSSSSSSNSSTDPPLMSLGASLKRMLSRNRSNGRIFPSS 240

Query: 241 NGDELNV 248
           NGDELNV
Sbjct: 241 NGDELNV 247

[Close]

BLAST of CmoCh01G007140 vs. ExPASy TrEMBL
Match: A0A6J1HPE0 (RING-H2 finger protein ATL63-like OS=Cucurbita moschata OX=3662 GN=LOC111464835 PE=4 SV=1)

HSP 1 Score: 397.5 bits (1020), Expect = 4.0e-107
Identity = 216/271 (79.70%), Postives = 231/271 (85.24%), Query Frame = 0


Query: 1   MAFNSTSLSDFTQSIFSYNSNVILAALISLLLVVLFVLLLHAYANCFFPRPRHRHAQRSS 60
           MAFNSTSL  F QSIFSYNSN++LAALISLLLVVLFVLLLHAYANCFFP+PRHR   R+S
Sbjct: 1   MAFNSTSLIGFAQSIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPQPRHR---RTS 60

Query: 61  VTVSYVLGPPRLSRFESIPFDLGFAQSKGLDSSVISAIPLFVYESEEKKCATVMECVICL 120
           VTVSYVLGPPRLSRF+S+PFD G A SKGLD SVISAIPLFVYESEEKKCA VMECVICL
Sbjct: 61  VTVSYVLGPPRLSRFDSVPFDSGAAPSKGLDPSVISAIPLFVYESEEKKCAAVMECVICL 120

Query: 121 SEFEEREIGRRLPICNHGFHLECIDMWLNSHANCPVCRAPVV------AEAVESGRLSGE 180
           SEFEERE+GRRLP C+HGFHLECIDMWLNSHA+CPVCRAPV+      ++AVESGRLSGE
Sbjct: 121 SEFEERELGRRLPKCSHGFHLECIDMWLNSHASCPVCRAPVLGDAADCSDAVESGRLSGE 180

Query: 181 REIGEEIVTEERTNCEIQRNEEQNGQFHSSS------------------SSSSSSTDPPL 240
           REIG EIVTEER NCEIQRNE QNGQFHSSS                  SSSSSSTD PL
Sbjct: 181 REIGGEIVTEERRNCEIQRNEGQNGQFHSSSSSSSSSSSSSSSSSSSSLSSSSSSTDQPL 240

Query: 241 MSLGASLKRMLSRNRSNGRIFPSSNGDELNV 248
           MSLGASLKRMLSRNRS+GRIFPSS+GDEL+V
Sbjct: 241 MSLGASLKRMLSRNRSDGRIFPSSDGDELDV 268

[Close]

BLAST of CmoCh01G007140 vs. ExPASy TrEMBL
Match: A0A6J1HZJ3 (RING-H2 finger protein ATL63-like OS=Cucurbita maxima OX=3661 GN=LOC111469533 PE=4 SV=1)

HSP 1 Score: 396.4 bits (1017), Expect = 9.0e-107
Identity = 213/262 (81.30%), Postives = 230/262 (87.79%), Query Frame = 0


Query: 1   MAFNSTSLSDFTQSIFSYNSNVILAALISLLLVVLFVLLLHAYANCFFPRPRHRHAQRSS 60
           MAFNSTSL  F QSIFSYNSN++LAALISLLLVVLFVLLLHAYANCFFP+PRHR   R+S
Sbjct: 1   MAFNSTSLIGFAQSIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPQPRHR---RTS 60

Query: 61  VTVSYVLGPPRLSRFESIPFDLGFAQSKGLDSSVISAIPLFVYESEEKKCATVMECVICL 120
           VTVSYVLGPPRLSRF+S+PFD G A SKGLD SVISAIPLFVYESEEKKC  VMECVICL
Sbjct: 61  VTVSYVLGPPRLSRFDSVPFDSGAAPSKGLDPSVISAIPLFVYESEEKKCTAVMECVICL 120

Query: 121 SEFEEREIGRRLPICNHGFHLECIDMWLNSHANCPVCRAPVV------AEAVESGRLSGE 180
           SEFEERE+GRRLP C+HGFHLECIDMWLNSHA+CPVCRAPV+      ++AVESGRLSGE
Sbjct: 121 SEFEERELGRRLPKCSHGFHLECIDMWLNSHASCPVCRAPVLGDAADCSDAVESGRLSGE 180

Query: 181 REIGEEIVTEERTNCEIQRNEEQNGQFHSSS---------SSSSSSTDPPLMSLGASLKR 240
           REIG EIVTEER+NCEIQRNE QNGQF+S S         SSSSSSTD PLMSLGASLKR
Sbjct: 181 REIGGEIVTEERSNCEIQRNEGQNGQFYSDSSSSSSSSSLSSSSSSTDQPLMSLGASLKR 240

Query: 241 MLSRNRSNGRIFPSSNGDELNV 248
           MLSRNRS+GRIFPSS+GDEL+V
Sbjct: 241 MLSRNRSDGRIFPSSDGDELDV 259

[Close]

BLAST of CmoCh01G007140 vs. ExPASy TrEMBL
Match: A0A1S3C6K6 (RING-H2 finger protein ATL63 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103497058 PE=4 SV=1)

HSP 1 Score: 340.5 bits (872), Expect = 5.9e-90
Identity = 188/248 (75.81%), Postives = 205/248 (82.66%), Query Frame = 0


Query: 4   NSTSLSDFTQSIFSYNSNVILAALISLLLVVLFVLLLHAYANCFFPRPRHRHAQRSSVTV 63
           NSTSL+ F QSIFSYNSN++LAALISLLLVVLFVLLLHAYANCFFP PRHR  +R+SVTV
Sbjct: 5   NSTSLTQFAQSIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPHPRHR--RRTSVTV 64

Query: 64  SYVLGPPRLSRFES-IPFDLGFAQSKGLDSSVISAIPLFVYESEEKKCATVMECVICLSE 123
           SYVL PPRLSRF+S +PFDLG A SKGLD SVISAIPLFVYESEEKKCA  MECVICLSE
Sbjct: 65  SYVLAPPRLSRFDSVVPFDLGSAPSKGLDPSVISAIPLFVYESEEKKCAATMECVICLSE 124

Query: 124 FEEREIGRRLPICNHGFHLECIDMWLNSHANCPVCRAPVVAEAVE--SGRLSGEREIGEE 183
           FEERE+GRRLP C HGFHLECIDMWLNSHANCPVCR PV+ EAV+      SGE EIG E
Sbjct: 125 FEERELGRRLPKCRHGFHLECIDMWLNSHANCPVCREPVIGEAVDCSDAAESGEGEIGRE 184

Query: 184 IVTEERTNCEIQRNEEQNGQFHSSSSSSSSSTDPPLM-SLGASLKRMLSRNRSNGRIFPS 243
            V           NE Q+GQF+S SSSSSS   PPLM S+GASL R+LSRNRS+GRIFPS
Sbjct: 185 TV-----------NEGQSGQFNSDSSSSSSIDPPPLMSSIGASLIRILSRNRSDGRIFPS 239

Query: 244 SNGDELNV 248
           SNG+EL+V
Sbjct: 245 SNGEELDV 239

[Close]

BLAST of CmoCh01G007140 vs. NCBI nr
Match: XP_022949238.1 (RING-H2 finger protein ATL63-like [Cucurbita moschata] >KAG6607326.1 RING-H2 finger protein ATL2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 478.8 bits (1231), Expect = 2.8e-131
Identity = 247/247 (100.00%), Postives = 247/247 (100.00%), Query Frame = 0


Query: 1   MAFNSTSLSDFTQSIFSYNSNVILAALISLLLVVLFVLLLHAYANCFFPRPRHRHAQRSS 60
           MAFNSTSLSDFTQSIFSYNSNVILAALISLLLVVLFVLLLHAYANCFFPRPRHRHAQRSS
Sbjct: 1   MAFNSTSLSDFTQSIFSYNSNVILAALISLLLVVLFVLLLHAYANCFFPRPRHRHAQRSS 60

Query: 61  VTVSYVLGPPRLSRFESIPFDLGFAQSKGLDSSVISAIPLFVYESEEKKCATVMECVICL 120
           VTVSYVLGPPRLSRFESIPFDLGFAQSKGLDSSVISAIPLFVYESEEKKCATVMECVICL
Sbjct: 61  VTVSYVLGPPRLSRFESIPFDLGFAQSKGLDSSVISAIPLFVYESEEKKCATVMECVICL 120

Query: 121 SEFEEREIGRRLPICNHGFHLECIDMWLNSHANCPVCRAPVVAEAVESGRLSGEREIGEE 180
           SEFEEREIGRRLPICNHGFHLECIDMWLNSHANCPVCRAPVVAEAVESGRLSGEREIGEE
Sbjct: 121 SEFEEREIGRRLPICNHGFHLECIDMWLNSHANCPVCRAPVVAEAVESGRLSGEREIGEE 180

Query: 181 IVTEERTNCEIQRNEEQNGQFHSSSSSSSSSTDPPLMSLGASLKRMLSRNRSNGRIFPSS 240
           IVTEERTNCEIQRNEEQNGQFHSSSSSSSSSTDPPLMSLGASLKRMLSRNRSNGRIFPSS
Sbjct: 181 IVTEERTNCEIQRNEEQNGQFHSSSSSSSSSTDPPLMSLGASLKRMLSRNRSNGRIFPSS 240

Query: 241 NGDELNV 248
           NGDELNV
Sbjct: 241 NGDELNV 247

[Close]

BLAST of CmoCh01G007140 vs. NCBI nr
Match: KAG7037003.1 (E3 ubiquitin-protein ligase ATL41, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 474.6 bits (1220), Expect = 5.4e-130
Identity = 245/247 (99.19%), Postives = 245/247 (99.19%), Query Frame = 0


Query: 1   MAFNSTSLSDFTQSIFSYNSNVILAALISLLLVVLFVLLLHAYANCFFPRPRHRHAQRSS 60
           MAFNSTSLSDFTQSIFSYNSNVILAALISLLLVVLFVLLLHAYANCFFPRPRHRHAQRSS
Sbjct: 1   MAFNSTSLSDFTQSIFSYNSNVILAALISLLLVVLFVLLLHAYANCFFPRPRHRHAQRSS 60

Query: 61  VTVSYVLGPPRLSRFESIPFDLGFAQSKGLDSSVISAIPLFVYESEEKKCATVMECVICL 120
           V VSYVLGPPRLSRFESIPFDLGFAQSKGLDSSVISAIPLFVYESEEKKCATVMECVICL
Sbjct: 61  VNVSYVLGPPRLSRFESIPFDLGFAQSKGLDSSVISAIPLFVYESEEKKCATVMECVICL 120

Query: 121 SEFEEREIGRRLPICNHGFHLECIDMWLNSHANCPVCRAPVVAEAVESGRLSGEREIGEE 180
           SEFEEREIGRRLPICNHGFHLECIDMWLNSHANCPVCRAPVVAEAVESGRLSGEREIGEE
Sbjct: 121 SEFEEREIGRRLPICNHGFHLECIDMWLNSHANCPVCRAPVVAEAVESGRLSGEREIGEE 180

Query: 181 IVTEERTNCEIQRNEEQNGQFHSSSSSSSSSTDPPLMSLGASLKRMLSRNRSNGRIFPSS 240
           IVTEERTNCEIQRNEEQNGQFHSSSSSSSSSTDPP MSLGASLKRMLSRNRSNGRIFPSS
Sbjct: 181 IVTEERTNCEIQRNEEQNGQFHSSSSSSSSSTDPPSMSLGASLKRMLSRNRSNGRIFPSS 240

Query: 241 NGDELNV 248
           NGDELNV
Sbjct: 241 NGDELNV 247

[Close]

BLAST of CmoCh01G007140 vs. NCBI nr
Match: XP_023521602.1 (RING-H2 finger protein ATL63-like [Cucurbita pepo subsp. pepo] >XP_023521603.1 RING-H2 finger protein ATL63-like [Cucurbita pepo subsp. pepo] >XP_023523166.1 RING-H2 finger protein ATL63-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 473.8 bits (1218), Expect = 9.2e-130
Identity = 245/247 (99.19%), Postives = 245/247 (99.19%), Query Frame = 0


Query: 1   MAFNSTSLSDFTQSIFSYNSNVILAALISLLLVVLFVLLLHAYANCFFPRPRHRHAQRSS 60
           MAFNSTSLSDFTQSIFSYNSNVILAALISLLLVVLFVLLLHAYANCFFPRPRHRHAQRSS
Sbjct: 1   MAFNSTSLSDFTQSIFSYNSNVILAALISLLLVVLFVLLLHAYANCFFPRPRHRHAQRSS 60

Query: 61  VTVSYVLGPPRLSRFESIPFDLGFAQSKGLDSSVISAIPLFVYESEEKKCATVMECVICL 120
           VTVSYVLGPPRLSRFESIPFDLGFAQSKGLDSSVISAIPLFVYESEEKKCATVMECVICL
Sbjct: 61  VTVSYVLGPPRLSRFESIPFDLGFAQSKGLDSSVISAIPLFVYESEEKKCATVMECVICL 120

Query: 121 SEFEEREIGRRLPICNHGFHLECIDMWLNSHANCPVCRAPVVAEAVESGRLSGEREIGEE 180
           SEFEEREIGRRLPICNHGFHLECIDMWLNSHANCPVCRAPVVAEAVESG LSGE EIGEE
Sbjct: 121 SEFEEREIGRRLPICNHGFHLECIDMWLNSHANCPVCRAPVVAEAVESGGLSGESEIGEE 180

Query: 181 IVTEERTNCEIQRNEEQNGQFHSSSSSSSSSTDPPLMSLGASLKRMLSRNRSNGRIFPSS 240
           IVTEERTNCEIQRNEEQNGQFHSSSSSSSSSTDPPLMSLGASLKRMLSRNRSNGRIFPSS
Sbjct: 181 IVTEERTNCEIQRNEEQNGQFHSSSSSSSSSTDPPLMSLGASLKRMLSRNRSNGRIFPSS 240

Query: 241 NGDELNV 248
           NGDELNV
Sbjct: 241 NGDELNV 247

[Close]

BLAST of CmoCh01G007140 vs. NCBI nr
Match: XP_022998608.1 (RING-H2 finger protein ATL63-like [Cucurbita maxima])

HSP 1 Score: 471.5 bits (1212), Expect = 4.5e-129
Identity = 242/247 (97.98%), Postives = 245/247 (99.19%), Query Frame = 0


Query: 1   MAFNSTSLSDFTQSIFSYNSNVILAALISLLLVVLFVLLLHAYANCFFPRPRHRHAQRSS 60
           MAFNSTSLSDFTQSIFSYNSNVILAALISLLLVVLFVLLLHAYANCFFPRPRHRHAQRSS
Sbjct: 1   MAFNSTSLSDFTQSIFSYNSNVILAALISLLLVVLFVLLLHAYANCFFPRPRHRHAQRSS 60

Query: 61  VTVSYVLGPPRLSRFESIPFDLGFAQSKGLDSSVISAIPLFVYESEEKKCATVMECVICL 120
           VTVSYVLGPPRLSRF+SIPFDLGFAQSKGLDSSVIS IPLFVYESEEKKCATVMECVICL
Sbjct: 61  VTVSYVLGPPRLSRFDSIPFDLGFAQSKGLDSSVISTIPLFVYESEEKKCATVMECVICL 120

Query: 121 SEFEEREIGRRLPICNHGFHLECIDMWLNSHANCPVCRAPVVAEAVESGRLSGEREIGEE 180
           SEFEEREIGRRLPICNHGFHL+CIDMWLNSHANCPVCRAPVVAEAVES RLSGEREIGEE
Sbjct: 121 SEFEEREIGRRLPICNHGFHLDCIDMWLNSHANCPVCRAPVVAEAVESSRLSGEREIGEE 180

Query: 181 IVTEERTNCEIQRNEEQNGQFHSSSSSSSSSTDPPLMSLGASLKRMLSRNRSNGRIFPSS 240
           IVTEERTNCEIQRNEEQNGQFHSSSSSS+SSTDPPLMSLGASLKRMLSRNRSNGRIFPSS
Sbjct: 181 IVTEERTNCEIQRNEEQNGQFHSSSSSSNSSTDPPLMSLGASLKRMLSRNRSNGRIFPSS 240

Query: 241 NGDELNV 248
           NGDELNV
Sbjct: 241 NGDELNV 247

[Close]

BLAST of CmoCh01G007140 vs. NCBI nr
Match: XP_023519269.1 (RING-H2 finger protein ATL63-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 397.5 bits (1020), Expect = 8.3e-107
Identity = 214/266 (80.45%), Postives = 230/266 (86.47%), Query Frame = 0


Query: 1   MAFNSTSLSDFTQSIFSYNSNVILAALISLLLVVLFVLLLHAYANCFFPRPRHRHAQRSS 60
           MAFNSTSL  F QS+FSYNSN++LAALISLLLVVLFVLLLHAYANCFFP+PRHR   R+S
Sbjct: 1   MAFNSTSLIGFAQSVFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPQPRHR---RTS 60

Query: 61  VTVSYVLGPPRLSRFESIPFDLGFAQSKGLDSSVISAIPLFVYESEEKKCATVMECVICL 120
           VTVSYVLGPPRLSRF+S+PFD G A SKGLD SVISAIPLFVYESEEKKCA VMECVICL
Sbjct: 61  VTVSYVLGPPRLSRFDSVPFDSGAAPSKGLDPSVISAIPLFVYESEEKKCAAVMECVICL 120

Query: 121 SEFEEREIGRRLPICNHGFHLECIDMWLNSHANCPVCRAPVV------AEAVESGRLSGE 180
           SEFEERE+GRRLP C+HGFHLECIDMWLNSHA+CPVCRAPV+      ++AVESGRLSGE
Sbjct: 121 SEFEERELGRRLPKCSHGFHLECIDMWLNSHASCPVCRAPVLGDATDCSDAVESGRLSGE 180

Query: 181 REIGEEIVTEERTNCEIQRNEEQNGQFHSSS-------------SSSSSSTDPPLMSLGA 240
           REIG EIVTEER NCEIQRNE QNGQFHS S             SSSSSSTD PLMSLGA
Sbjct: 181 REIGGEIVTEERRNCEIQRNEGQNGQFHSDSSSSSSSSSSSSSLSSSSSSTDQPLMSLGA 240

Query: 241 SLKRMLSRNRSNGRIFPSSNGDELNV 248
           SLKRMLSRNRS+GRIFPSS+GDEL+V
Sbjct: 241 SLKRMLSRNRSDGRIFPSSDGDELDV 263

[Close]

BLAST of CmoCh01G007140 vs. TAIR 10
Match: AT5G58580.1 (TOXICOS EN LEVADURA 63 )

HSP 1 Score: 147.5 bits (371), Expect = 1.4e-35
Identity = 114/297 (38.38%), Postives = 155/297 (52.19%), Query Frame = 0


Query: 6   TSLSDFTQSIFSYNSNVILAALISLLLVVLFVLLLHAYANCFFP------------RPRH 65
           +SLS F + + SYNSNV+LAAL+ LLLVVLFVLLLH YA  F+             R R 
Sbjct: 13  SSLSSFLKILSSYNSNVLLAALVFLLLVVLFVLLLHFYARFFWSPSHQDFSAAARHRRRR 72

Query: 66  RHAQRSSVTVSYVLGPPRLSRFE---SIPFDLGFAQSKGLDSSVISAIPLFVYESEEKKC 125
           R  +R +VT + ++    L  F+   S P        KGLDSSVIS+IPLFVYE  E++ 
Sbjct: 73  RRNRRRTVTTTRIIPSLPLGGFDDGVSSPAATATRDDKGLDSSVISSIPLFVYEENEEEE 132

Query: 126 ATVMECVICLSEFEEREIGRRLPICNHGFHLECIDMWLNSHANCPVCRAPVVA------- 185
               ECVICL  +E  + GR+L  C HGFH+ECIDMWL+SH+ CP+CR+PV+A       
Sbjct: 133 DEEEECVICLGLWEAGDFGRKLRNCGHGFHVECIDMWLSSHSTCPLCRSPVLAAVSDEEN 192

Query: 186 -----EAVE---------------SGRLSGEREIG-------EEIVT-----EERTNCEI 244
                 AVE                  +SG+R +        +++ T     EE    E+
Sbjct: 193 LKLAVNAVEEEAEVRLQMSPAGENESNVSGDRRVSLSLSVMEDDLKTGDDDGEEEVRIEV 252

[Close]

BLAST of CmoCh01G007140 vs. TAIR 10
Match: AT3G16720.1 (TOXICOS EN LEVADURA 2 )

HSP 1 Score: 111.3 bits (277), Expect = 1.1e-24
Identity = 69/203 (33.99%), Postives = 109/203 (53.69%), Query Frame = 0


Query: 16  FSYNSNVILAALISLLLVVLFVLLLHAYANCFFPRPRHRHAQRSS----VTVSYVLGPPR 75
           ++ +  ++L+A++ L  VV+ ++ LH YA  +  R R RH +R S     T+ +    P 
Sbjct: 24  YAMSGKIMLSAIVILFFVVILMVFLHLYARWYLLRARRRHLRRRSRNRRATMVFFTADPS 83

Query: 76  LSRFESIPFDLGFAQSKGLDSSVISAIPLFVYESEEKKCATVMECVICLSEFEEREIGRR 135
            +    +        S+GLD +VI ++P+F +  E  K    +EC +CLSEFEE E GR 
Sbjct: 84  TAATSVV-------ASRGLDPNVIKSLPVFTFSDETHK--DPIECAVCLSEFEESETGRV 143

Query: 136 LPICNHGFHLECIDMWLNSHANCPVCRAPVVAEA-VESGRLSGEREIGEEIVTEERTNCE 195
           LP C H FH++CIDMW +SH+ CP+CR+ V + A +ES   + ERE+   + ++     E
Sbjct: 144 LPNCQHTFHVDCIDMWFHSHSTCPLCRSLVESLAGIESTAAAREREVVIAVDSDPVLVIE 203

Query: 196 IQRNEEQNGQFHSSSSSSSSSTD 214
              +     + H S SS     D
Sbjct: 204 PSSSSGLTDEPHGSGSSQMLRED 217

[Close]

BLAST of CmoCh01G007140 vs. TAIR 10
Match: AT2G47560.1 (RING/U-box superfamily protein )

HSP 1 Score: 104.4 bits (259), Expect = 1.4e-22
Identity = 61/169 (36.09%), Postives = 89/169 (52.66%), Query Frame = 0


Query: 12  TQSIFSYNSNVILAALISLLLVVLFVLLLHAYANCFFPRPRHRHAQRSSVTVSYVLGPPR 71
           T S ++ N  ++L+++I L + V+ +L  H+YA   F R   R  +R    +  +   PR
Sbjct: 18  TSSGYALNGKIMLSSVIVLFVAVIMILCFHSYARWLFRRHNRRIRRRIRSHLRTLSASPR 77

Query: 72  LSRFESIPFDLGFAQSKGLDSSVISAIPLFVYES------EEKKCATVMECVICLSEFEE 131
                           + LD +V+  IP+FVY S      EEK+     EC +CLSEFEE
Sbjct: 78  ---------------DQALDQAVLDKIPIFVYSSKNPPPPEEKE-----ECSVCLSEFEE 137

Query: 132 REIGRRLPICNHGFHLECIDMWLNSHANCPVCRAPVVA--EAVESGRLS 173
            + GR LP C H FH++CID W  S + CP+CRAPV    + +E+G  S
Sbjct: 138 EDEGRLLPKCGHSFHVDCIDTWFRSRSTCPLCRAPVQPPFQVIETGSSS 166

[Close]

BLAST of CmoCh01G007140 vs. TAIR 10
Match: AT3G62690.1 (AtL5 )

HSP 1 Score: 99.8 bits (247), Expect = 3.4e-21
Identity = 55/148 (37.16%), Postives = 83/148 (56.08%), Query Frame = 0


Query: 14  SIFSYNSNVILAALISLLLVVLFVLLLHAYANCFFPRPRHRHAQRSSVTVSYVLGPPRLS 73
           S +S N  ++LA++I L + V+ +L  H+YA   F R   R  +R S  +  +      +
Sbjct: 20  SRYSLNGKIMLASVIILFVAVILILCFHSYARWLFRRQNRRIRRRISAHLRSLAAARDPT 79

Query: 74  RFESIPFDLGFAQSKGLDSSVISAIPLFVYESEEKKCATVMECVICLSEFEEREIGRRLP 133
           +  S            LD +V+  IP+FVY  +  + + + EC +CLSEFEE + GR LP
Sbjct: 80  QSSS--------SLSPLDPTVLEKIPIFVYSVKTHE-SPLEECSVCLSEFEEDDEGRVLP 139

Query: 134 ICNHGFHLECIDMWLNSHANCPVCRAPV 162
            C H FH++CID W  S ++CP+CRAPV
Sbjct: 140 KCGHVFHVDCIDTWFRSRSSCPLCRAPV 158

[Close]

BLAST of CmoCh01G007140 vs. TAIR 10
Match: AT1G72310.1 (RING/U-box superfamily protein )

HSP 1 Score: 96.3 bits (238), Expect = 3.7e-20
Identity = 56/162 (34.57%), Postives = 85/162 (52.47%), Query Frame = 0


Query: 20  SNVILAALISLLLVVLFVLLLHAYANCFFPR-------PRHRHAQRSSVTVSYVLGPPRL 79
           S +IL A+I L + VLFVL+LH YA  ++ R        + +  ++        + PP +
Sbjct: 22  SKIILTAIIVLFMAVLFVLILHLYAKLYWWRIDQLQQQQQQQQQEQEQEEDQSSIAPPVV 81

Query: 80  SRFESIPFDLGFAQ----SKGLDSSVISAIPLFVYESEEKKCATVMECVICLSEFEEREI 139
           +R +   F     Q    + GL S  +S++P+  +  +   C   +EC ICLSE  + + 
Sbjct: 82  TRRQRRRFIFVPGQDALSNTGLTSFELSSLPIVFFRQD--SCKDGLECSICLSELVKGDK 141

Query: 140 GRRLPICNHGFHLECIDMWLNSHANCPVCRAPVVAEAVESGR 171
            R LP CNH FH+ECIDMW  SH+ CP+CR  V+     S +
Sbjct: 142 ARLLPKCNHSFHVECIDMWFQSHSTCPICRNTVLGPEQASSK 181

The following BLAST results are available for this feature:

BLAST of CmoCh01G007140 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LUZ9	2.0e-34	38.38	RING-H2 finger protein ATL63 OS=Arabidopsis thaliana OX=3702 GN=ATL63 PE=2 SV=1	[more]
Q8L9T5	1.6e-23	33.99	RING-H2 finger protein ATL2 OS=Arabidopsis thaliana OX=3702 GN=ATL2 PE=2 SV=2	[more]
O22255	1.9e-21	36.09	RING-H2 finger protein ATL64 OS=Arabidopsis thaliana OX=3702 GN=ATL64 PE=2 SV=1	[more]
Q9LZJ6	4.7e-20	37.16	RING-H2 finger protein ATL5 OS=Arabidopsis thaliana OX=3702 GN=ATL5 PE=2 SV=1	[more]
Q9XF63	5.2e-19	34.57	RING-H2 finger protein ATL3 OS=Arabidopsis thaliana OX=3702 GN=ATL3 PE=2 SV=1	[more]

BLAST of CmoCh01G007140 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GBH1	1.4e-131	100.00	RING-H2 finger protein ATL63-like OS=Cucurbita moschata OX=3662 GN=LOC111452651 ...	[more]
A0A6J1KH83	2.2e-129	97.98	RING-H2 finger protein ATL63-like OS=Cucurbita maxima OX=3661 GN=LOC111493195 PE...	[more]
A0A6J1HPE0	4.0e-107	79.70	RING-H2 finger protein ATL63-like OS=Cucurbita moschata OX=3662 GN=LOC111464835 ...	[more]
A0A6J1HZJ3	9.0e-107	81.30	RING-H2 finger protein ATL63-like OS=Cucurbita maxima OX=3661 GN=LOC111469533 PE...	[more]
A0A1S3C6K6	5.9e-90	75.81	RING-H2 finger protein ATL63 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103497058 ...	[more]

BLAST of CmoCh01G007140 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022949238.1	2.8e-131	100.00	RING-H2 finger protein ATL63-like [Cucurbita moschata] >KAG6607326.1 RING-H2 fin...	[more]
KAG7037003.1	5.4e-130	99.19	E3 ubiquitin-protein ligase ATL41, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_023521602.1	9.2e-130	99.19	RING-H2 finger protein ATL63-like [Cucurbita pepo subsp. pepo] >XP_023521603.1 R...	[more]
XP_022998608.1	4.5e-129	97.98	RING-H2 finger protein ATL63-like [Cucurbita maxima]	[more]
XP_023519269.1	8.3e-107	80.45	RING-H2 finger protein ATL63-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of CmoCh01G007140 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G58580.1	1.4e-35	38.38	TOXICOS EN LEVADURA 63	[more]
AT3G16720.1	1.1e-24	33.99	TOXICOS EN LEVADURA 2	[more]
AT2G47560.1	1.4e-22	36.09	RING/U-box superfamily protein	[more]
AT3G62690.1	3.4e-21	37.16	AtL5	[more]
AT1G72310.1	3.7e-20	34.57	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 116..157 e-value: 1.2E-6 score: 38.1
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 115..158 e-value: 4.6E-12 score: 46.1
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 116..158 score: 12.297489
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 82..163 e-value: 1.5E-22 score: 81.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 193..218
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 193..217
None	No IPR available	PANTHER	PTHR14155:SF514	CHROMATIN REGULATOR PHD FAMILY-RELATED	coord: 6..242
None	No IPR available	PANTHER	PTHR14155	RING FINGER DOMAIN-CONTAINING	coord: 6..242
None	No IPR available	CDD	cd16461	RING-H2_EL5_like	coord: 115..158 e-value: 1.30417E-17 score: 71.9575
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 100..162

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh01G007140.1	CmoCh01G007140.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane