CmoCh01G006900 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh01G006900
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	RING-type domain-containing protein
Location	Cmo_Chr01: 3529787 .. 3532102 (-)
RNA-Seq Expression	CmoCh01G006900
Synteny	CmoCh01G006900

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAAAATAGAACGGCTCGAGTTCGAAGCTGAGAAAAACCGGCGTTTGCTTGTGCTTTTGCTTGATCAGTTCGAAAGAATTTCGGATTATCGATTACGAGATTTTGTTTTTTGGTTGATTTTTTTATGTTAGATTATGAGGATAATCTGTAGGGTTTCGGTTCGAGATTTTGATTCTACTTGATCGATCATTCGTTTTCGTTGGATTGGATTTTTCTTTTCCGGGAAAATTCGACCGCCATGGGAAAGCTTTCGTTCAAGGATTCGCTCAAAGCGCTTGAAGCCGATGTACAGCATGCCAATACTCTGTAACTTTCTTCTTCATTCTCTTTGAGAAACGAAATTTTCGATTTGTATGGAGAATCTTTGTTTCTGCAATTTTTGGCCGTAAATTCCACTCTGAAAACACCGATGAGTTAATAAACTGATTCTGGCATGTTTATGGCTTGATTTTTCTTGTTAATTGTTTCTTTCTCTGGTTTTGTCTAGAAGATACATATTCTACTGGCGACAGTACAAGGGACTGTTTACTTTTTGAAACTGTCTACATTGTTGAATGTTGGATGAGCAATATAAATATCTTTCAGTGAATTGTCCAGTCAAATTAAGAATGATTTAGCTTCTGTACTGCTATTGAATTTCATTACTGCTTTGTGTTTTTTTTGTTTTTCAATTGTTTTTTGTATCAGTGAATAGGGAAGAAATTGCATCGTTGATTGCTCTTTCTGTCTCTGTGTAAAAGTTGAGCAGTACGGGACTGAAGAAATATCTGAGATGAGAAAGAGGGGGGATATCAGATTGATAGCAAATTCATATGAATTAGCATTAACAAATTGTTGTGGTCAAATTTTCTCTGAGCCCTGTTTTTCTTGTTTAACCATTCCTCTTTTGTTTGCAGTGCTTTAGACTGTCCAAGAGAGAGTGATGGAGCTTGTGTTCAAATGAGAATATCTTACAGTCCTGCCGCTCCCTTTTTCCTTTTTCTTGTTCAATGGACTGACTGCCGCCTTGCTGGTGCCTTGGGGCTGCTAAGAATCCATGTCTATGTGGTATGCCTTCTACATTTTGGTACTATTTGGCAATAGTTACCAGTTAGCAGCTTTTTTGTTTGTTCATGTAGGCTTGATATTTTCTCCATAGAAGGCCTTATCTGTACTAACTTAATAAGAGGTCTGATGTTCTATTTCTTGACAATGAAGGTCAATATTGTTTAATTACTTCTTGTCGTGTAATGTTATGATGCAGACTTATCCAGATGGAAAGACCACCATGTCCATTTATGAGCGAAAATCTAGCATTAGAGAATTTTATGGTGAGTGAGATTCTTAGATTGCATCTTAAGTATTGGAACTTAGCTTTCTGGTCTTGGTCTTGTTCTTTTCTGGTGGGGGTGTTAATGGATTGTTCTTCTCATCAACAGTGGTAATCTTCCCTTCTCTTCTGCAACTTCAAAAGGGCATCACAGAATTGGAAGATAGGAAACAGAAAGAGGTTTGCAATTCCAGATACAAAAGAAGGGATGAAGTTGCAAGGGGAAAACTGTCAGAAATCGACAAAGAAAGAGAAAAGGAGTGTGGAATTTGCATGGAGGTTAACAGCATTGTTGTTTTGCCTCATTGCATCCATTCTTTGTGCTTGAAATGTTATCGAGATTGGTAAGTTTTAGACTATGATTTTACTTTTCAATTGAACACAATCAGCAAAAAAAGATAGAATCAAAAGTGCTTTCAAGAAAGTAGACTAAGTTTGAAATCAGATTATCTGTTGGATCTGAAAATCTTCAAAATTATCCTGATTTGATTAGTTTGCATTCACTGTAGCACTATTCTTAGACTCATATTCAACCTTATCTTGTCCGTCTGTTTCATCGTCCAGGCGCAGTCGTTCTCAGTCGTGTCCCTTCTGTCGGGATAGCCTCAAGCGAGTGAACTCTGGTGACCTATGGATCTACACAGACAGGAATGAAACGATTGATCTTACTTCAATTTTGCAGGAGAACCAGAAGAGACTATTTATGTACATTAATAAGTTGCCATTGGTTGTTCCAGATCCAGTGTTTCTTCCTCTTGATTCTCATATTAGATGAAGAATGGGGGACGCACCTCTTCAATCTGTGAGTAGTAGTTTCAACTTTCTGTGTAGATAATTGATTGTAGGTTGATAAGATAGGGATTGTAGAAGGGATGTTTGCCAAATTTCATTTTCTTAGTTTATCAAAGTAAATGCTTTTGGTTCACCCAATGCAAAAGTTTGTTGAAATATCAGCAAATGAAATTAGTGATAGGGACAGAGATGAAATTAGTGATAGGGACAGAGATG

mRNA sequence

TAAAATAGAACGGCTCGAGTTCGAAGCTGAGAAAAACCGGCGTTTGCTTGTGCTTTTGCTTGATCAGTTCGAAAGAATTTCGGATTATCGATTACGAGATTTTGTTTTTTGGTTGATTTTTTTATGTTAGATTATGAGGATAATCTGTAGGGTTTCGGTTCGAGATTTTGATTCTACTTGATCGATCATTCGTTTTCGTTGGATTGGATTTTTCTTTTCCGGGAAAATTCGACCGCCATGGGAAAGCTTTCGTTCAAGGATTCGCTCAAAGCGCTTGAAGCCGATGTACAGCATGCCAATACTCTTGCTTTAGACTGTCCAAGAGAGAGTGATGGAGCTTGTGTTCAAATGAGAATATCTTACAGTCCTGCCGCTCCCTTTTTCCTTTTTCTTGTTCAATGGACTGACTGCCGCCTTGCTGGTGCCTTGGGGCTGCTAAGAATCCATGTCTATGTGACTTATCCAGATGGAAAGACCACCATGTCCATTTATGAGCGAAAATCTAGCATTAGAGAATTTTATGTGGTAATCTTCCCTTCTCTTCTGCAACTTCAAAAGGGCATCACAGAATTGGAAGATAGGAAACAGAAAGAGGTTTGCAATTCCAGATACAAAAGAAGGGATGAAGTTGCAAGGGGAAAACTGTCAGAAATCGACAAAGAAAGAGAAAAGGAGTGTGGAATTTGCATGGAGGTTAACAGCATTGTTGTTTTGCCTCATTGCATCCATTCTTTGTGCTTGAAATGTTATCGAGATTGGCGCAGTCGTTCTCAGTCGTGTCCCTTCTGTCGGGATAGCCTCAAGCGAGTGAACTCTGGTGACCTATGGATCTACACAGACAGGAATGAAACGATTGATCTTACTTCAATTTTGCAGGAGAACCAGAAGAGACTATTTATGTACATTAATAAGTTGCCATTGGTTGTTCCAGATCCAGTGTTTCTTCCTCTTGATTCTCATATTAGATGAAGAATGGGGGACGCACCTCTTCAATCTGTGAGTAGTAGTTTCAACTTTCTGTGTAGATAATTGATTGTAGGTTGATAAGATAGGGATTGTAGAAGGGATGTTTGCCAAATTTCATTTTCTTAGTTTATCAAAGTAAATGCTTTTGGTTCACCCAATGCAAAAGTTTGTTGAAATATCAGCAAATGAAATTAGTGATAGGGACAGAGATGAAATTAGTGATAGGGACAGAGATG

Coding sequence (CDS)

ATGGGAAAGCTTTCGTTCAAGGATTCGCTCAAAGCGCTTGAAGCCGATGTACAGCATGCCAATACTCTTGCTTTAGACTGTCCAAGAGAGAGTGATGGAGCTTGTGTTCAAATGAGAATATCTTACAGTCCTGCCGCTCCCTTTTTCCTTTTTCTTGTTCAATGGACTGACTGCCGCCTTGCTGGTGCCTTGGGGCTGCTAAGAATCCATGTCTATGTGACTTATCCAGATGGAAAGACCACCATGTCCATTTATGAGCGAAAATCTAGCATTAGAGAATTTTATGTGGTAATCTTCCCTTCTCTTCTGCAACTTCAAAAGGGCATCACAGAATTGGAAGATAGGAAACAGAAAGAGGTTTGCAATTCCAGATACAAAAGAAGGGATGAAGTTGCAAGGGGAAAACTGTCAGAAATCGACAAAGAAAGAGAAAAGGAGTGTGGAATTTGCATGGAGGTTAACAGCATTGTTGTTTTGCCTCATTGCATCCATTCTTTGTGCTTGAAATGTTATCGAGATTGGCGCAGTCGTTCTCAGTCGTGTCCCTTCTGTCGGGATAGCCTCAAGCGAGTGAACTCTGGTGACCTATGGATCTACACAGACAGGAATGAAACGATTGATCTTACTTCAATTTTGCAGGAGAACCAGAAGAGACTATTTATGTACATTAATAAGTTGCCATTGGTTGTTCCAGATCCAGTGTTTCTTCCTCTTGATTCTCATATTAGATGA

Protein sequence

MGKLSFKDSLKALEADVQHANTLALDCPRESDGACVQMRISYSPAAPFFLFLVQWTDCRLAGALGLLRIHVYVTYPDGKTTMSIYERKSSIREFYVVIFPSLLQLQKGITELEDRKQKEVCNSRYKRRDEVARGKLSEIDKEREKECGICMEVNSIVVLPHCIHSLCLKCYRDWRSRSQSCPFCRDSLKRVNSGDLWIYTDRNETIDLTSILQENQKRLFMYINKLPLVVPDPVFLPLDSHIR

Homology

[Close]

BLAST of CmoCh01G006900 vs. ExPASy Swiss-Prot
Match: Q9M022 (E3 ubiquitin-protein ligase AIRP2 OS=Arabidopsis thaliana OX=3702 GN=AIRP2 PE=1 SV=1)

HSP 1 Score: 335.5 bits (859), Expect = 5.0e-91
Identity = 159/233 (68.24%), Postives = 191/233 (81.97%), Query Frame = 0


Query: 5   SFKDSLKALEADVQHANTLALDCPRESDGACVQMRISYSPAAPFFLFLVQWTDCRLAGAL 64
           SFKDSLKALEAD+Q ANTLA + P E DG  VQMR+SYSPAA  FLFL+QWTDC  AGAL
Sbjct: 4   SFKDSLKALEADIQFANTLASEYPEEYDGGYVQMRLSYSPAAHLFLFLLQWTDCHFAGAL 63

Query: 65  GLLRIHVYVTYPDGKTTMSIYERKSSIREFYVVIFPSLLQLQKGITELEDRKQKEVCNSR 124
           GLLRI +Y  Y DGKTTMS++ERK+SIREFY V+FPSLLQL  GIT++E+RKQKE+C+ R
Sbjct: 64  GLLRILIYKAYVDGKTTMSLHERKTSIREFYDVLFPSLLQLHGGITDVEERKQKEICDKR 123

Query: 125 YKRRDEVARGKLSEIDKEREKECGICMEVNSIVVLPHCIHSLCLKCYRDWRSRSQSCPFC 184
           Y+++D   +GK+SEID ERE+ECGIC+E+ + VVLP C HS+C+ CYR+WR+RSQSCPFC
Sbjct: 124 YRKKDRTDKGKMSEIDLEREEECGICLEIRNKVVLPTCNHSMCINCYRNWRARSQSCPFC 183

Query: 185 RDSLKRVNSGDLWIYTDRNETIDLTSILQENQKRLFMYINKLPLVVPDPVFLP 238
           R SLKRVNSGDLWIYT   E  DL +I +EN KRL +YI+KLPLV  DP  +P
Sbjct: 184 RGSLKRVNSGDLWIYTCSAEIADLPAIYKENLKRLLIYIDKLPLVTSDPNLVP 236

[Close]

BLAST of CmoCh01G006900 vs. ExPASy Swiss-Prot
Match: Q9N373 (E3 ubiquitin-protein ligase makorin OS=Caenorhabditis elegans OX=6239 GN=lep-2 PE=1 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 3.2e-05
Identity = 31/96 (32.29%), Postives = 42/96 (43.75%), Query Frame = 0


Query: 139 IDKEREKECGICME-----VNSIVVLPHCIHSLCLKCYRDWRSRSQ-----------SCP 198
           + K  +K CGICME          +L  C H  CL C R WRS+ Q           SCP
Sbjct: 205 LQKTEQKTCGICMENIFEKNLRFGILNGCQHCFCLDCIRQWRSKDQENVELATKTVRSCP 264

Query: 199 FCRDSLKRVNSGDLWIYTDRNETIDLTSILQENQKR 219
            CR     V     W+ + + + + L  + +EN KR
Sbjct: 265 ECRQHSDYVIPSLFWVESGQEKDL-LIEMYKENTKR 299

[Close]

BLAST of CmoCh01G006900 vs. ExPASy Swiss-Prot
Match: Q60764 (Probable E3 ubiquitin-protein ligase makorin-3 OS=Mus musculus OX=10090 GN=Mkrn3 PE=2 SV=2)

HSP 1 Score: 49.7 bits (117), Expect = 5.5e-05
Identity = 27/76 (35.53%), Postives = 36/76 (47.37%), Query Frame = 0


Query: 139 IDKEREKECGICMEV---------NSIVVLPHCIHSLCLKCYRDWRSRSQ-------SCP 198
           + +  +K CGICMEV             +L  C H+ CL+C R WRS +Q       SCP
Sbjct: 339 VQRSMDKVCGICMEVVYEKADPSDRRFGILFSCNHTYCLRCIRRWRSATQFENRISKSCP 398

[Close]

BLAST of CmoCh01G006900 vs. ExPASy Swiss-Prot
Match: Q8IYW5 (E3 ubiquitin-protein ligase RNF168 OS=Homo sapiens OX=9606 GN=RNF168 PE=1 SV=1)

HSP 1 Score: 46.2 bits (108), Expect = 6.1e-04
Identity = 29/78 (37.18%), Postives = 44/78 (56.41%), Query Frame = 0


Query: 144 EKECGICMEVNSIVVLPHCIHSLCLKCYRDW-RSRSQSCPFCRDSLKRVNSGDLWIYTDR 203
           E +CGICME+    V   C H+LC  C++      S  CPFCR   +RV+S   + +T R
Sbjct: 13  ECQCGICMEILVEPVTLPCNHTLCKPCFQSTVEKASLCCPFCR---RRVSSWTRY-HTRR 72

Query: 204 NE--TIDLTSILQENQKR 219
           N    ++L +I+Q++  R
Sbjct: 73  NSLVNVELWTIIQKHYPR 86

[Close]

BLAST of CmoCh01G006900 vs. ExPASy TrEMBL
Match: A0A6J1GAV0 (uncharacterized protein LOC111452344 OS=Cucurbita moschata OX=3662 GN=LOC111452344 PE=4 SV=1)

HSP 1 Score: 499.2 bits (1284), Expect = 9.7e-138
Identity = 243/243 (100.00%), Postives = 243/243 (100.00%), Query Frame = 0


Query: 1   MGKLSFKDSLKALEADVQHANTLALDCPRESDGACVQMRISYSPAAPFFLFLVQWTDCRL 60
           MGKLSFKDSLKALEADVQHANTLALDCPRESDGACVQMRISYSPAAPFFLFLVQWTDCRL
Sbjct: 1   MGKLSFKDSLKALEADVQHANTLALDCPRESDGACVQMRISYSPAAPFFLFLVQWTDCRL 60

Query: 61  AGALGLLRIHVYVTYPDGKTTMSIYERKSSIREFYVVIFPSLLQLQKGITELEDRKQKEV 120
           AGALGLLRIHVYVTYPDGKTTMSIYERKSSIREFYVVIFPSLLQLQKGITELEDRKQKEV
Sbjct: 61  AGALGLLRIHVYVTYPDGKTTMSIYERKSSIREFYVVIFPSLLQLQKGITELEDRKQKEV 120

Query: 121 CNSRYKRRDEVARGKLSEIDKEREKECGICMEVNSIVVLPHCIHSLCLKCYRDWRSRSQS 180
           CNSRYKRRDEVARGKLSEIDKEREKECGICMEVNSIVVLPHCIHSLCLKCYRDWRSRSQS
Sbjct: 121 CNSRYKRRDEVARGKLSEIDKEREKECGICMEVNSIVVLPHCIHSLCLKCYRDWRSRSQS 180

Query: 181 CPFCRDSLKRVNSGDLWIYTDRNETIDLTSILQENQKRLFMYINKLPLVVPDPVFLPLDS 240
           CPFCRDSLKRVNSGDLWIYTDRNETIDLTSILQENQKRLFMYINKLPLVVPDPVFLPLDS
Sbjct: 181 CPFCRDSLKRVNSGDLWIYTDRNETIDLTSILQENQKRLFMYINKLPLVVPDPVFLPLDS 240

Query: 241 HIR 244
           HIR
Sbjct: 241 HIR 243

[Close]

BLAST of CmoCh01G006900 vs. ExPASy TrEMBL
Match: A0A6J1KDB1 (uncharacterized protein LOC111493310 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111493310 PE=4 SV=1)

HSP 1 Score: 488.0 bits (1255), Expect = 2.2e-134
Identity = 236/243 (97.12%), Postives = 239/243 (98.35%), Query Frame = 0


Query: 1   MGKLSFKDSLKALEADVQHANTLALDCPRESDGACVQMRISYSPAAPFFLFLVQWTDCRL 60
           MGKLSFKDSLKALEADVQHANTLALDCPRESDGACVQMRISYSPAAPFFLFLVQWTDC L
Sbjct: 1   MGKLSFKDSLKALEADVQHANTLALDCPRESDGACVQMRISYSPAAPFFLFLVQWTDCHL 60

Query: 61  AGALGLLRIHVYVTYPDGKTTMSIYERKSSIREFYVVIFPSLLQLQKGITELEDRKQKEV 120
           AGALGLLRIH+YVTYPDGKTTMSIYERKSSIREFYVVIFPSLLQLQKGITELEDRKQKEV
Sbjct: 61  AGALGLLRIHIYVTYPDGKTTMSIYERKSSIREFYVVIFPSLLQLQKGITELEDRKQKEV 120

Query: 121 CNSRYKRRDEVARGKLSEIDKEREKECGICMEVNSIVVLPHCIHSLCLKCYRDWRSRSQS 180
           CN+RYKRRDE  RGKLSEIDKEREKECGICMEVNSIVVLPHC HSLCLKCYRDWRSRSQS
Sbjct: 121 CNARYKRRDEFVRGKLSEIDKEREKECGICMEVNSIVVLPHCNHSLCLKCYRDWRSRSQS 180

Query: 181 CPFCRDSLKRVNSGDLWIYTDRNETIDLTSILQENQKRLFMYINKLPLVVPDPVFLPLDS 240
           CPFCRDSLKRVNSGDLWIYTDRNETIDLTSILQEN+KRLFMYINKLPLVVPDPVFLPLDS
Sbjct: 181 CPFCRDSLKRVNSGDLWIYTDRNETIDLTSILQENRKRLFMYINKLPLVVPDPVFLPLDS 240

Query: 241 HIR 244
           HIR
Sbjct: 241 HIR 243

[Close]

BLAST of CmoCh01G006900 vs. ExPASy TrEMBL
Match: A0A6J1HMH6 (E3 ubiquitin-protein ligase rnf8-B-like OS=Cucurbita moschata OX=3662 GN=LOC111464952 PE=4 SV=1)

HSP 1 Score: 453.4 bits (1165), Expect = 6.1e-124
Identity = 216/243 (88.89%), Postives = 234/243 (96.30%), Query Frame = 0


Query: 1   MGKLSFKDSLKALEADVQHANTLALDCPRESDGACVQMRISYSPAAPFFLFLVQWTDCRL 60
           MGKLSFKDSLKALEADVQ+ANTLALDCPRESDGACVQMR+SYSPAAPFFLFLVQWTDC L
Sbjct: 1   MGKLSFKDSLKALEADVQYANTLALDCPRESDGACVQMRLSYSPAAPFFLFLVQWTDCYL 60

Query: 61  AGALGLLRIHVYVTYPDGKTTMSIYERKSSIREFYVVIFPSLLQLQKGITELEDRKQKEV 120
           AGALGLLRI +YVTYPDGKTTM+IYERK+SIREFYVVIFPSLLQLQ+GITELEDRKQKEV
Sbjct: 61  AGALGLLRILIYVTYPDGKTTMAIYERKASIREFYVVIFPSLLQLQRGITELEDRKQKEV 120

Query: 121 CNSRYKRRDEVARGKLSEIDKEREKECGICMEVNSIVVLPHCIHSLCLKCYRDWRSRSQS 180
           CN+RYKRRDE+ RGKLSEID EREKECGICME+N++VVLP+C HSLCL CYRDWR+RSQS
Sbjct: 121 CNARYKRRDEIGRGKLSEIDIEREKECGICMEINTMVVLPNCNHSLCLMCYRDWRNRSQS 180

Query: 181 CPFCRDSLKRVNSGDLWIYTDRNETIDLTSILQENQKRLFMYINKLPLVVPDPVFLPLDS 240
           CPFCRDSLKRVNSGDLWI+TD++E IDLTSILQ+N+KRLF YI KLPLVVPDPVFLPLDS
Sbjct: 181 CPFCRDSLKRVNSGDLWIFTDKSEMIDLTSILQDNRKRLFAYIEKLPLVVPDPVFLPLDS 240

Query: 241 HIR 244
           HIR
Sbjct: 241 HIR 243

[Close]

BLAST of CmoCh01G006900 vs. ExPASy TrEMBL
Match: A0A6J1I3Y6 (E3 ubiquitin-protein ligase rnf8-A-like OS=Cucurbita maxima OX=3661 GN=LOC111469447 PE=4 SV=1)

HSP 1 Score: 451.4 bits (1160), Expect = 2.3e-123
Identity = 215/243 (88.48%), Postives = 233/243 (95.88%), Query Frame = 0


Query: 1   MGKLSFKDSLKALEADVQHANTLALDCPRESDGACVQMRISYSPAAPFFLFLVQWTDCRL 60
           MGKLSFKDSLKALEADVQ+ANTLALDCPRESDGACVQMR+SYSPAAPFFLFLVQWTDC L
Sbjct: 1   MGKLSFKDSLKALEADVQYANTLALDCPRESDGACVQMRLSYSPAAPFFLFLVQWTDCYL 60

Query: 61  AGALGLLRIHVYVTYPDGKTTMSIYERKSSIREFYVVIFPSLLQLQKGITELEDRKQKEV 120
           AGALGLLRI +YVTYPDGKTTM+IYERK+SIREFYVVIFPSLLQLQ+GITELEDRKQKEV
Sbjct: 61  AGALGLLRILIYVTYPDGKTTMAIYERKASIREFYVVIFPSLLQLQRGITELEDRKQKEV 120

Query: 121 CNSRYKRRDEVARGKLSEIDKEREKECGICMEVNSIVVLPHCIHSLCLKCYRDWRSRSQS 180
           CN+RYKRRDE  RGKLSEID EREKECGICME+N++VVLP+C HSLCL CYRDWR+RSQS
Sbjct: 121 CNARYKRRDEFGRGKLSEIDIEREKECGICMEINTMVVLPNCNHSLCLMCYRDWRNRSQS 180

Query: 181 CPFCRDSLKRVNSGDLWIYTDRNETIDLTSILQENQKRLFMYINKLPLVVPDPVFLPLDS 240
           CPFCRDSLKRVNSGDLWI+TD++E +DLTSILQ+N+KRLF YI KLPLVVPDPVFLPLDS
Sbjct: 181 CPFCRDSLKRVNSGDLWIFTDKSEMVDLTSILQDNRKRLFTYIEKLPLVVPDPVFLPLDS 240

Query: 241 HIR 244
           HIR
Sbjct: 241 HIR 243

[Close]

BLAST of CmoCh01G006900 vs. ExPASy TrEMBL
Match: A0A0A0LY84 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G530140 PE=4 SV=1)

HSP 1 Score: 450.3 bits (1157), Expect = 5.2e-123
Identity = 216/243 (88.89%), Postives = 229/243 (94.24%), Query Frame = 0


Query: 1   MGKLSFKDSLKALEADVQHANTLALDCPRESDGACVQMRISYSPAAPFFLFLVQWTDCRL 60
           MGKLSFKDSLKALEADVQHANTLALDCPRESDGACVQMR+SYSPAAPFFLFLVQWTDC L
Sbjct: 1   MGKLSFKDSLKALEADVQHANTLALDCPRESDGACVQMRLSYSPAAPFFLFLVQWTDCYL 60

Query: 61  AGALGLLRIHVYVTYPDGKTTMSIYERKSSIREFYVVIFPSLLQLQKGITELEDRKQKEV 120
           AGALGLLRI +YVTYPDGKTTMSIYERK+SIREFYVVIFPSLLQLQKGITELEDRKQKEV
Sbjct: 61  AGALGLLRILIYVTYPDGKTTMSIYERKASIREFYVVIFPSLLQLQKGITELEDRKQKEV 120

Query: 121 CNSRYKRRDEVARGKLSEIDKEREKECGICMEVNSIVVLPHCIHSLCLKCYRDWRSRSQS 180
           CN+RY RRDE  RGKLSEID EREKECGICME N +VVLP+C HSLCLKCYRDWR RSQS
Sbjct: 121 CNARYSRRDEFGRGKLSEIDIEREKECGICMEFNGMVVLPNCNHSLCLKCYRDWRGRSQS 180

Query: 181 CPFCRDSLKRVNSGDLWIYTDRNETIDLTSILQENQKRLFMYINKLPLVVPDPVFLPLDS 240
           CPFCRDSLKRVNSGDLWI+TD++E IDL SIL +N+KRLF YI+KLPLVVPDPVFLP+DS
Sbjct: 181 CPFCRDSLKRVNSGDLWIFTDKSEMIDLNSILHDNRKRLFAYIDKLPLVVPDPVFLPMDS 240

Query: 241 HIR 244
           HIR
Sbjct: 241 HIR 243

[Close]

BLAST of CmoCh01G006900 vs. NCBI nr
Match: XP_022948775.1 (uncharacterized protein LOC111452344 [Cucurbita moschata])

HSP 1 Score: 499.2 bits (1284), Expect = 2.0e-137
Identity = 243/243 (100.00%), Postives = 243/243 (100.00%), Query Frame = 0


Query: 1   MGKLSFKDSLKALEADVQHANTLALDCPRESDGACVQMRISYSPAAPFFLFLVQWTDCRL 60
           MGKLSFKDSLKALEADVQHANTLALDCPRESDGACVQMRISYSPAAPFFLFLVQWTDCRL
Sbjct: 1   MGKLSFKDSLKALEADVQHANTLALDCPRESDGACVQMRISYSPAAPFFLFLVQWTDCRL 60

Query: 61  AGALGLLRIHVYVTYPDGKTTMSIYERKSSIREFYVVIFPSLLQLQKGITELEDRKQKEV 120
           AGALGLLRIHVYVTYPDGKTTMSIYERKSSIREFYVVIFPSLLQLQKGITELEDRKQKEV
Sbjct: 61  AGALGLLRIHVYVTYPDGKTTMSIYERKSSIREFYVVIFPSLLQLQKGITELEDRKQKEV 120

Query: 121 CNSRYKRRDEVARGKLSEIDKEREKECGICMEVNSIVVLPHCIHSLCLKCYRDWRSRSQS 180
           CNSRYKRRDEVARGKLSEIDKEREKECGICMEVNSIVVLPHCIHSLCLKCYRDWRSRSQS
Sbjct: 121 CNSRYKRRDEVARGKLSEIDKEREKECGICMEVNSIVVLPHCIHSLCLKCYRDWRSRSQS 180

Query: 181 CPFCRDSLKRVNSGDLWIYTDRNETIDLTSILQENQKRLFMYINKLPLVVPDPVFLPLDS 240
           CPFCRDSLKRVNSGDLWIYTDRNETIDLTSILQENQKRLFMYINKLPLVVPDPVFLPLDS
Sbjct: 181 CPFCRDSLKRVNSGDLWIYTDRNETIDLTSILQENQKRLFMYINKLPLVVPDPVFLPLDS 240

Query: 241 HIR 244
           HIR
Sbjct: 241 HIR 243

[Close]

BLAST of CmoCh01G006900 vs. NCBI nr
Match: KAG6607303.1 (E3 ubiquitin-protein ligase AIRP2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7036982.1 RING finger protein-like protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 493.4 bits (1269), Expect = 1.1e-135
Identity = 240/243 (98.77%), Postives = 241/243 (99.18%), Query Frame = 0


Query: 1   MGKLSFKDSLKALEADVQHANTLALDCPRESDGACVQMRISYSPAAPFFLFLVQWTDCRL 60
           MGKLSFKDSLKALEADVQHANTLALDCPRESDGACVQMRISYSPAAPFFLFLVQWTDCRL
Sbjct: 1   MGKLSFKDSLKALEADVQHANTLALDCPRESDGACVQMRISYSPAAPFFLFLVQWTDCRL 60

Query: 61  AGALGLLRIHVYVTYPDGKTTMSIYERKSSIREFYVVIFPSLLQLQKGITELEDRKQKEV 120
           AGALGLLRIHVYVTYPDGKTTMSIYERKSSIREFY VIFPSLLQLQKGITELEDRKQKEV
Sbjct: 61  AGALGLLRIHVYVTYPDGKTTMSIYERKSSIREFYAVIFPSLLQLQKGITELEDRKQKEV 120

Query: 121 CNSRYKRRDEVARGKLSEIDKEREKECGICMEVNSIVVLPHCIHSLCLKCYRDWRSRSQS 180
           CNSRYKRRDEVARGKLSEIDKEREKECGICMEVNSIVVLPHC HSLCLKCYRDWRSRSQS
Sbjct: 121 CNSRYKRRDEVARGKLSEIDKEREKECGICMEVNSIVVLPHCNHSLCLKCYRDWRSRSQS 180

Query: 181 CPFCRDSLKRVNSGDLWIYTDRNETIDLTSILQENQKRLFMYINKLPLVVPDPVFLPLDS 240
           CPFCRDSLKRVNSGDLWIYTDRNETIDLTSILQEN+KRLFMYINKLPLVVPDPVFLPLDS
Sbjct: 181 CPFCRDSLKRVNSGDLWIYTDRNETIDLTSILQENRKRLFMYINKLPLVVPDPVFLPLDS 240

Query: 241 HIR 244
           HIR
Sbjct: 241 HIR 243

[Close]

BLAST of CmoCh01G006900 vs. NCBI nr
Match: XP_023525243.1 (uncharacterized protein LOC111788903 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 488.4 bits (1256), Expect = 3.5e-134
Identity = 236/243 (97.12%), Postives = 240/243 (98.77%), Query Frame = 0


Query: 1   MGKLSFKDSLKALEADVQHANTLALDCPRESDGACVQMRISYSPAAPFFLFLVQWTDCRL 60
           MGKLSFKDSLKALEADVQHANTLALDCPRESDGACVQMRISYSPAAPFFLFLVQWTDCRL
Sbjct: 1   MGKLSFKDSLKALEADVQHANTLALDCPRESDGACVQMRISYSPAAPFFLFLVQWTDCRL 60

Query: 61  AGALGLLRIHVYVTYPDGKTTMSIYERKSSIREFYVVIFPSLLQLQKGITELEDRKQKEV 120
           AGALGLLRIH++VTYPDGKTTMSIYERKSSIREFYVVIFPSLLQLQKGITELEDRKQKEV
Sbjct: 61  AGALGLLRIHIFVTYPDGKTTMSIYERKSSIREFYVVIFPSLLQLQKGITELEDRKQKEV 120

Query: 121 CNSRYKRRDEVARGKLSEIDKEREKECGICMEVNSIVVLPHCIHSLCLKCYRDWRSRSQS 180
           CN+RYKRRDE  RGKLSEIDKEREKECGICMEVNSIVVLPHC HSLCLKCYRDWRSRSQS
Sbjct: 121 CNARYKRRDEFVRGKLSEIDKEREKECGICMEVNSIVVLPHCNHSLCLKCYRDWRSRSQS 180

Query: 181 CPFCRDSLKRVNSGDLWIYTDRNETIDLTSILQENQKRLFMYINKLPLVVPDPVFLPLDS 240
           CPFCRDSLKRVNSGDLWIYTDRNETIDLTSILQEN+KRLFMYINKLPLVVPDPVFLPLDS
Sbjct: 181 CPFCRDSLKRVNSGDLWIYTDRNETIDLTSILQENRKRLFMYINKLPLVVPDPVFLPLDS 240

Query: 241 HIR 244
           HIR
Sbjct: 241 HIR 243

[Close]

BLAST of CmoCh01G006900 vs. NCBI nr
Match: XP_022998735.1 (uncharacterized protein LOC111493310 isoform X1 [Cucurbita maxima])

HSP 1 Score: 488.0 bits (1255), Expect = 4.6e-134
Identity = 236/243 (97.12%), Postives = 239/243 (98.35%), Query Frame = 0


Query: 1   MGKLSFKDSLKALEADVQHANTLALDCPRESDGACVQMRISYSPAAPFFLFLVQWTDCRL 60
           MGKLSFKDSLKALEADVQHANTLALDCPRESDGACVQMRISYSPAAPFFLFLVQWTDC L
Sbjct: 1   MGKLSFKDSLKALEADVQHANTLALDCPRESDGACVQMRISYSPAAPFFLFLVQWTDCHL 60

Query: 61  AGALGLLRIHVYVTYPDGKTTMSIYERKSSIREFYVVIFPSLLQLQKGITELEDRKQKEV 120
           AGALGLLRIH+YVTYPDGKTTMSIYERKSSIREFYVVIFPSLLQLQKGITELEDRKQKEV
Sbjct: 61  AGALGLLRIHIYVTYPDGKTTMSIYERKSSIREFYVVIFPSLLQLQKGITELEDRKQKEV 120

Query: 121 CNSRYKRRDEVARGKLSEIDKEREKECGICMEVNSIVVLPHCIHSLCLKCYRDWRSRSQS 180
           CN+RYKRRDE  RGKLSEIDKEREKECGICMEVNSIVVLPHC HSLCLKCYRDWRSRSQS
Sbjct: 121 CNARYKRRDEFVRGKLSEIDKEREKECGICMEVNSIVVLPHCNHSLCLKCYRDWRSRSQS 180

Query: 181 CPFCRDSLKRVNSGDLWIYTDRNETIDLTSILQENQKRLFMYINKLPLVVPDPVFLPLDS 240
           CPFCRDSLKRVNSGDLWIYTDRNETIDLTSILQEN+KRLFMYINKLPLVVPDPVFLPLDS
Sbjct: 181 CPFCRDSLKRVNSGDLWIYTDRNETIDLTSILQENRKRLFMYINKLPLVVPDPVFLPLDS 240

Query: 241 HIR 244
           HIR
Sbjct: 241 HIR 243

[Close]

BLAST of CmoCh01G006900 vs. NCBI nr
Match: XP_022965010.1 (E3 ubiquitin-protein ligase rnf8-B-like [Cucurbita moschata])

HSP 1 Score: 453.4 bits (1165), Expect = 1.3e-123
Identity = 216/243 (88.89%), Postives = 234/243 (96.30%), Query Frame = 0


Query: 1   MGKLSFKDSLKALEADVQHANTLALDCPRESDGACVQMRISYSPAAPFFLFLVQWTDCRL 60
           MGKLSFKDSLKALEADVQ+ANTLALDCPRESDGACVQMR+SYSPAAPFFLFLVQWTDC L
Sbjct: 1   MGKLSFKDSLKALEADVQYANTLALDCPRESDGACVQMRLSYSPAAPFFLFLVQWTDCYL 60

Query: 61  AGALGLLRIHVYVTYPDGKTTMSIYERKSSIREFYVVIFPSLLQLQKGITELEDRKQKEV 120
           AGALGLLRI +YVTYPDGKTTM+IYERK+SIREFYVVIFPSLLQLQ+GITELEDRKQKEV
Sbjct: 61  AGALGLLRILIYVTYPDGKTTMAIYERKASIREFYVVIFPSLLQLQRGITELEDRKQKEV 120

Query: 121 CNSRYKRRDEVARGKLSEIDKEREKECGICMEVNSIVVLPHCIHSLCLKCYRDWRSRSQS 180
           CN+RYKRRDE+ RGKLSEID EREKECGICME+N++VVLP+C HSLCL CYRDWR+RSQS
Sbjct: 121 CNARYKRRDEIGRGKLSEIDIEREKECGICMEINTMVVLPNCNHSLCLMCYRDWRNRSQS 180

Query: 181 CPFCRDSLKRVNSGDLWIYTDRNETIDLTSILQENQKRLFMYINKLPLVVPDPVFLPLDS 240
           CPFCRDSLKRVNSGDLWI+TD++E IDLTSILQ+N+KRLF YI KLPLVVPDPVFLPLDS
Sbjct: 181 CPFCRDSLKRVNSGDLWIFTDKSEMIDLTSILQDNRKRLFAYIEKLPLVVPDPVFLPLDS 240

Query: 241 HIR 244
           HIR
Sbjct: 241 HIR 243

[Close]

BLAST of CmoCh01G006900 vs. TAIR 10
Match: AT5G58787.1 (RING/U-box superfamily protein )

HSP 1 Score: 375.9 bits (964), Expect = 2.4e-104
Identity = 178/245 (72.65%), Postives = 212/245 (86.53%), Query Frame = 0


Query: 1   MGKLSFKDSLKALEADVQHANTLALDCPRESDGACVQMRISYSPAAPFFLFLVQWTDCRL 60
           M KLSFKDSLKALEAD+QHANTLALD PRE DGA VQMR+SYSP A FFLFLVQWTDC+L
Sbjct: 1   MAKLSFKDSLKALEADIQHANTLALDYPREKDGARVQMRLSYSPTAQFFLFLVQWTDCKL 60

Query: 61  AGALGLLRIHVYVTYPDGKTTMSIYERKSSIREFYVVIFPSLLQLQKGITELEDRKQKEV 120
           AG LGLLR+ +Y+TY DGKTTMS+YERK+SIREF  VI PSL QLQ+G+T+++D KQKEV
Sbjct: 61  AGFLGLLRVLIYMTYADGKTTMSVYERKASIREFQAVILPSLSQLQRGVTDIDDSKQKEV 120

Query: 121 CNSRYKRRDEVARGKLSEIDKEREKECGICMEVNSIVVLPHCIHSLCLKCYRDWRSRSQS 180
           C  RY+++DE    ++SEI+ ERE+ECGICME+NS VVLP+C HSLC+KCYRDWR RSQS
Sbjct: 121 CKMRYRKKDE---SEMSEIEIEREEECGICMEMNSKVVLPNCTHSLCIKCYRDWRGRSQS 180

Query: 181 CPFCRDSLKRVNSGDLWIYTDRNETIDLTSILQENQKRLFMYINKLPLVVPDPVFL--PL 240
           CPFCRDSLKRV+SGDLW++ D+N+T++LT+I +ENQKRLFMYI KLPLVVPD V+   P 
Sbjct: 181 CPFCRDSLKRVDSGDLWMFLDQNDTVNLTAIARENQKRLFMYIEKLPLVVPDQVYASSPY 240

Query: 241 DSHIR 244
           D H+R
Sbjct: 241 DFHVR 242

[Close]

BLAST of CmoCh01G006900 vs. TAIR 10
Match: AT3G47160.1 (RING/U-box superfamily protein )

HSP 1 Score: 374.4 bits (960), Expect = 6.9e-104
Identity = 173/245 (70.61%), Postives = 213/245 (86.94%), Query Frame = 0


Query: 1   MGKLSFKDSLKALEADVQHANTLALDCPRESDGACVQMRISYSPAAPFFLFLVQWTDCRL 60
           M K+SFKDSLKALEAD+QHANT+ALD PRE DGA VQMR+SY+PAA F LFLVQWTDC L
Sbjct: 1   MAKVSFKDSLKALEADIQHANTVALDYPREKDGARVQMRLSYTPAAQFLLFLVQWTDCHL 60

Query: 61  AGALGLLRIHVYVTYPDGKTTMSIYERKSSIREFYVVIFPSLLQLQKGITELEDRKQKEV 120
           AG LGLLR+ +Y+TY DGKTTMS+YERK+SI++FY VIFPSLLQL++GIT+L+DRKQKEV
Sbjct: 61  AGTLGLLRVLIYMTYADGKTTMSVYERKTSIKDFYAVIFPSLLQLERGITDLDDRKQKEV 120

Query: 121 CNSRYKRRDEVARGKLSEIDKEREKECGICMEVNSIVVLPHCIHSLCLKCYRDWRSRSQS 180
           C  RY+ +DE  + KLSEID ERE+ECGICME+N++VVLP+C HSLC+KCYRDW  RS+S
Sbjct: 121 CKIRYRNKDETEKVKLSEIDIEREEECGICMEMNNMVVLPNCTHSLCIKCYRDWHGRSES 180

Query: 181 CPFCRDSLKRVNSGDLWIYTDRNETIDLTSILQENQKRLFMYINKLPLVVPDPVFL--PL 240
           CPFCRDSLKRVNSGDLW+  ++++T+++ +I +EN+KRLF+YI KLPLVVPD VF   P 
Sbjct: 181 CPFCRDSLKRVNSGDLWMLMEKSDTVNMYTIERENKKRLFVYIEKLPLVVPDQVFASSPY 240

Query: 241 DSHIR 244
           D H++
Sbjct: 241 DCHVK 245

[Close]

BLAST of CmoCh01G006900 vs. TAIR 10
Match: AT3G47160.2 (RING/U-box superfamily protein )

HSP 1 Score: 365.5 bits (937), Expect = 3.2e-101
Identity = 173/257 (67.32%), Postives = 213/257 (82.88%), Query Frame = 0


Query: 1   MGKLSFKDSLKALEADVQHANTL------------ALDCPRESDGACVQMRISYSPAAPF 60
           M K+SFKDSLKALEAD+QHANT+            ALD PRE DGA VQMR+SY+PAA F
Sbjct: 1   MAKVSFKDSLKALEADIQHANTVLSNELGDEVIFRALDYPREKDGARVQMRLSYTPAAQF 60

Query: 61  FLFLVQWTDCRLAGALGLLRIHVYVTYPDGKTTMSIYERKSSIREFYVVIFPSLLQLQKG 120
            LFLVQWTDC LAG LGLLR+ +Y+TY DGKTTMS+YERK+SI++FY VIFPSLLQL++G
Sbjct: 61  LLFLVQWTDCHLAGTLGLLRVLIYMTYADGKTTMSVYERKTSIKDFYAVIFPSLLQLERG 120

Query: 121 ITELEDRKQKEVCNSRYKRRDEVARGKLSEIDKEREKECGICMEVNSIVVLPHCIHSLCL 180
           IT+L+DRKQKEVC  RY+ +DE  + KLSEID ERE+ECGICME+N++VVLP+C HSLC+
Sbjct: 121 ITDLDDRKQKEVCKIRYRNKDETEKVKLSEIDIEREEECGICMEMNNMVVLPNCTHSLCI 180

Query: 181 KCYRDWRSRSQSCPFCRDSLKRVNSGDLWIYTDRNETIDLTSILQENQKRLFMYINKLPL 240
           KCYRDW  RS+SCPFCRDSLKRVNSGDLW+  ++++T+++ +I +EN+KRLF+YI KLPL
Sbjct: 181 KCYRDWHGRSESCPFCRDSLKRVNSGDLWMLMEKSDTVNMYTIERENKKRLFVYIEKLPL 240

Query: 241 VVPDPVFL--PLDSHIR 244
           VVPD VF   P D H++
Sbjct: 241 VVPDQVFASSPYDCHVK 257

[Close]

BLAST of CmoCh01G006900 vs. TAIR 10
Match: AT5G58787.2 (RING/U-box superfamily protein )

HSP 1 Score: 346.3 bits (887), Expect = 2.0e-95
Identity = 168/245 (68.57%), Postives = 200/245 (81.63%), Query Frame = 0


Query: 1   MGKLSFKDSLKALEADVQHANTLALDCPRESDGACVQMRISYSPAAPFFLFLVQWTDCRL 60
           M KLSFKDSLKALEAD+QHANTLALD PRE DGA VQMR+SYSP A FFLFLVQWTDC+L
Sbjct: 1   MAKLSFKDSLKALEADIQHANTLALDYPREKDGARVQMRLSYSPTAQFFLFLVQWTDCKL 60

Query: 61  AGALGLLRIHVYVTYPDGKTTMSIYERKSSIREFYVVIFPSLLQLQKGITELEDRKQKEV 120
           AG LGLLR+ +Y+TY DGKTTMS+YERK+SIREF                +++D KQKEV
Sbjct: 61  AGFLGLLRVLIYMTYADGKTTMSVYERKASIREF---------------QDIDDSKQKEV 120

Query: 121 CNSRYKRRDEVARGKLSEIDKEREKECGICMEVNSIVVLPHCIHSLCLKCYRDWRSRSQS 180
           C  RY+++DE    ++SEI+ ERE+ECGICME+NS VVLP+C HSLC+KCYRDWR RSQS
Sbjct: 121 CKMRYRKKDE---SEMSEIEIEREEECGICMEMNSKVVLPNCTHSLCIKCYRDWRGRSQS 180

Query: 181 CPFCRDSLKRVNSGDLWIYTDRNETIDLTSILQENQKRLFMYINKLPLVVPDPVFL--PL 240
           CPFCRDSLKRV+SGDLW++ D+N+T++LT+I +ENQKRLFMYI KLPLVVPD V+   P 
Sbjct: 181 CPFCRDSLKRVDSGDLWMFLDQNDTVNLTAIARENQKRLFMYIEKLPLVVPDQVYASSPY 227

Query: 241 DSHIR 244
           D H+R
Sbjct: 241 DFHVR 227

[Close]

BLAST of CmoCh01G006900 vs. TAIR 10
Match: AT5G01520.1 (RING/U-box superfamily protein )

HSP 1 Score: 335.5 bits (859), Expect = 3.6e-92
Identity = 159/233 (68.24%), Postives = 191/233 (81.97%), Query Frame = 0


Query: 5   SFKDSLKALEADVQHANTLALDCPRESDGACVQMRISYSPAAPFFLFLVQWTDCRLAGAL 64
           SFKDSLKALEAD+Q ANTLA + P E DG  VQMR+SYSPAA  FLFL+QWTDC  AGAL
Sbjct: 4   SFKDSLKALEADIQFANTLASEYPEEYDGGYVQMRLSYSPAAHLFLFLLQWTDCHFAGAL 63

Query: 65  GLLRIHVYVTYPDGKTTMSIYERKSSIREFYVVIFPSLLQLQKGITELEDRKQKEVCNSR 124
           GLLRI +Y  Y DGKTTMS++ERK+SIREFY V+FPSLLQL  GIT++E+RKQKE+C+ R
Sbjct: 64  GLLRILIYKAYVDGKTTMSLHERKTSIREFYDVLFPSLLQLHGGITDVEERKQKEICDKR 123

Query: 125 YKRRDEVARGKLSEIDKEREKECGICMEVNSIVVLPHCIHSLCLKCYRDWRSRSQSCPFC 184
           Y+++D   +GK+SEID ERE+ECGIC+E+ + VVLP C HS+C+ CYR+WR+RSQSCPFC
Sbjct: 124 YRKKDRTDKGKMSEIDLEREEECGICLEIRNKVVLPTCNHSMCINCYRNWRARSQSCPFC 183

Query: 185 RDSLKRVNSGDLWIYTDRNETIDLTSILQENQKRLFMYINKLPLVVPDPVFLP 238
           R SLKRVNSGDLWIYT   E  DL +I +EN KRL +YI+KLPLV  DP  +P
Sbjct: 184 RGSLKRVNSGDLWIYTCSAEIADLPAIYKENLKRLLIYIDKLPLVTSDPNLVP 236

The following BLAST results are available for this feature:

BLAST of CmoCh01G006900 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M022	5.0e-91	68.24	E3 ubiquitin-protein ligase AIRP2 OS=Arabidopsis thaliana OX=3702 GN=AIRP2 PE=1 ...	[more]
Q9N373	3.2e-05	32.29	E3 ubiquitin-protein ligase makorin OS=Caenorhabditis elegans OX=6239 GN=lep-2 P...	[more]
Q60764	5.5e-05	35.53	Probable E3 ubiquitin-protein ligase makorin-3 OS=Mus musculus OX=10090 GN=Mkrn3...	[more]
Q8IYW5	6.1e-04	37.18	E3 ubiquitin-protein ligase RNF168 OS=Homo sapiens OX=9606 GN=RNF168 PE=1 SV=1	[more]

BLAST of CmoCh01G006900 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GAV0	9.7e-138	100.00	uncharacterized protein LOC111452344 OS=Cucurbita moschata OX=3662 GN=LOC1114523...	[more]
A0A6J1KDB1	2.2e-134	97.12	uncharacterized protein LOC111493310 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1HMH6	6.1e-124	88.89	E3 ubiquitin-protein ligase rnf8-B-like OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]
A0A6J1I3Y6	2.3e-123	88.48	E3 ubiquitin-protein ligase rnf8-A-like OS=Cucurbita maxima OX=3661 GN=LOC111469...	[more]
A0A0A0LY84	5.2e-123	88.89	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G530140 P...	[more]

BLAST of CmoCh01G006900 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022948775.1	2.0e-137	100.00	uncharacterized protein LOC111452344 [Cucurbita moschata]	[more]
KAG6607303.1	1.1e-135	98.77	E3 ubiquitin-protein ligase AIRP2, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023525243.1	3.5e-134	97.12	uncharacterized protein LOC111788903 [Cucurbita pepo subsp. pepo]	[more]
XP_022998735.1	4.6e-134	97.12	uncharacterized protein LOC111493310 isoform X1 [Cucurbita maxima]	[more]
XP_022965010.1	1.3e-123	88.89	E3 ubiquitin-protein ligase rnf8-B-like [Cucurbita moschata]	[more]

BLAST of CmoCh01G006900 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G58787.1	2.4e-104	72.65	RING/U-box superfamily protein	[more]
AT3G47160.1	6.9e-104	70.61	RING/U-box superfamily protein	[more]
AT3G47160.2	3.2e-101	67.32	RING/U-box superfamily protein	[more]
AT5G58787.2	2.0e-95	68.57	RING/U-box superfamily protein	[more]
AT5G01520.1	3.6e-92	68.24	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 147..184 e-value: 2.0E-5 score: 34.0
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 147..185 score: 11.574592
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 130..194 e-value: 4.3E-13 score: 50.3
None	No IPR available	PFAM	PF13920	zf-C3HC4_3	coord: 144..190 e-value: 7.4E-9 score: 35.3
None	No IPR available	PANTHER	PTHR15315:SF75	RING/U-BOX SUPERFAMILY PROTEIN	coord: 1..243
None	No IPR available	PANTHER	PTHR15315	RING FINGER PROTEIN 41, 151	coord: 1..243
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 135..190
IPR017907	Zinc finger, RING-type, conserved site	PROSITE	PS00518	ZF_RING_1	coord: 162..171

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh01G006900.1	CmoCh01G006900.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0005829	cytosol
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0061630	ubiquitin protein ligase activity