CmoCh01G004980 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh01G004980
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	RING-type domain-containing protein
Location	Cmo_Chr01: 2414911 .. 2415705 (-)
RNA-Seq Expression	CmoCh01G004980
Synteny	CmoCh01G004980

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGGAATTTTGCTTCCAATTGTGTGGCTGGATGTACTGGACTAAAGAGCAGCTCCCAAAAACTGACTCATACCGCCACAGAGTGTTCTGATGATGAGGTATCTTCAGATGGTAGGGAGGAGGTGCTAGAGTGTCCAATATGCTGGGAATCCTTCAACATTGTTGAGAATGTGCCCCATGTTTTATGGTGTGGCCATACTCTATGCAAGAATTGCATCTTGGGATTGCAGTGGGCTGTGGTGAAGTTCCCGACATTACCCGTTCAGCTTCCGCTTTTCATATCCTGCCCATGGTGCAACCTCCTATCCTTCCGCCTAGTTTATAAAGGAAACCTCAAATTCCCTTGCAAGAATTACTTCCTTTTGTGGATGGTTGAGAACATGAATGGCGAAAGGGTGAAATCTCGTTCTGATTTCTCTGGGGATCAACTAGTCTTCCCCGTGAGCGGAAATTCAAGGAGTAATCAAGTCGGTCACAGTAACCTTAGGAGGGGACACCATGTTCGTCAATTAGATCCACAACGACCAAACAACGCCAATAGCCATGCCCATAGCTTTAATCTGGAGAGACTGAAATCATCTCTCTGCAAATTGCTCGTGTTCTTCGTTCACTTGACAGCTAAATTTCCATTGGTGATCATCTTCCTCCTCATCATCCTATACGCCGTGCCTGCCAGTGCAGCAATCTTGGCTCTGTACATATTAGTCACCGTCCTTTTCGCTCTCCCGTCGTTTCTCATATTGTATTTTGCATACCCCAGTCTGGATTGGCTGATGAGGGAGATCATCACTTAA

mRNA sequence

ATGTGGAATTTTGCTTCCAATTGTGTGGCTGGATGTACTGGACTAAAGAGCAGCTCCCAAAAACTGACTCATACCGCCACAGAGTGTTCTGATGATGAGGTATCTTCAGATGGTAGGGAGGAGGTGCTAGAGTGTCCAATATGCTGGGAATCCTTCAACATTGTTGAGAATGTGCCCCATGTTTTATGGTGTGGCCATACTCTATGCAAGAATTGCATCTTGGGATTGCAGTGGGCTGTGGTGAAGTTCCCGACATTACCCGTTCAGCTTCCGCTTTTCATATCCTGCCCATGGTGCAACCTCCTATCCTTCCGCCTAGTTTATAAAGGAAACCTCAAATTCCCTTGCAAGAATTACTTCCTTTTGTGGATGGTTGAGAACATGAATGGCGAAAGGGTGAAATCTCGTTCTGATTTCTCTGGGGATCAACTAGTCTTCCCCGTGAGCGGAAATTCAAGGAGTAATCAAGTCGGTCACAGTAACCTTAGGAGGGGACACCATGTTCGTCAATTAGATCCACAACGACCAAACAACGCCAATAGCCATGCCCATAGCTTTAATCTGGAGAGACTGAAATCATCTCTCTGCAAATTGCTCGTGTTCTTCGTTCACTTGACAGCTAAATTTCCATTGGTGATCATCTTCCTCCTCATCATCCTATACGCCGTGCCTGCCAGTGCAGCAATCTTGGCTCTGTACATATTAGTCACCGTCCTTTTCGCTCTCCCGTCGTTTCTCATATTGTATTTTGCATACCCCAGTCTGGATTGGCTGATGAGGGAGATCATCACTTAA

Coding sequence (CDS)

ATGTGGAATTTTGCTTCCAATTGTGTGGCTGGATGTACTGGACTAAAGAGCAGCTCCCAAAAACTGACTCATACCGCCACAGAGTGTTCTGATGATGAGGTATCTTCAGATGGTAGGGAGGAGGTGCTAGAGTGTCCAATATGCTGGGAATCCTTCAACATTGTTGAGAATGTGCCCCATGTTTTATGGTGTGGCCATACTCTATGCAAGAATTGCATCTTGGGATTGCAGTGGGCTGTGGTGAAGTTCCCGACATTACCCGTTCAGCTTCCGCTTTTCATATCCTGCCCATGGTGCAACCTCCTATCCTTCCGCCTAGTTTATAAAGGAAACCTCAAATTCCCTTGCAAGAATTACTTCCTTTTGTGGATGGTTGAGAACATGAATGGCGAAAGGGTGAAATCTCGTTCTGATTTCTCTGGGGATCAACTAGTCTTCCCCGTGAGCGGAAATTCAAGGAGTAATCAAGTCGGTCACAGTAACCTTAGGAGGGGACACCATGTTCGTCAATTAGATCCACAACGACCAAACAACGCCAATAGCCATGCCCATAGCTTTAATCTGGAGAGACTGAAATCATCTCTCTGCAAATTGCTCGTGTTCTTCGTTCACTTGACAGCTAAATTTCCATTGGTGATCATCTTCCTCCTCATCATCCTATACGCCGTGCCTGCCAGTGCAGCAATCTTGGCTCTGTACATATTAGTCACCGTCCTTTTCGCTCTCCCGTCGTTTCTCATATTGTATTTTGCATACCCCAGTCTGGATTGGCTGATGAGGGAGATCATCACTTAA

Protein sequence

MWNFASNCVAGCTGLKSSSQKLTHTATECSDDEVSSDGREEVLECPICWESFNIVENVPHVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNYFLLWMVENMNGERVKSRSDFSGDQLVFPVSGNSRSNQVGHSNLRRGHHVRQLDPQRPNNANSHAHSFNLERLKSSLCKLLVFFVHLTAKFPLVIIFLLIILYAVPASAAILALYILVTVLFALPSFLILYFAYPSLDWLMREIIT

Homology

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BLAST of CmoCh01G004980 vs. ExPASy Swiss-Prot
Match: Q13049 (E3 ubiquitin-protein ligase TRIM32 OS=Homo sapiens OX=9606 GN=TRIM32 PE=1 SV=2)

HSP 1 Score: 50.8 bits (120), Expect = 2.7e-05
Identity = 24/67 (35.82%), Postives = 36/67 (53.73%), Query Frame = 0


Query: 37  DGREEVLECPICWESFNIVENVPHVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISC 96
           D   EVLECPIC ESF   +  P +L CGHT+C+ C+  L  + +            + C
Sbjct: 12  DALREVLECPICMESFTEEQLRPKLLHCGHTICRQCLEKLLASSIN----------GVRC 68

Query: 97  PWCNLLS 104
           P+C+ ++
Sbjct: 72  PFCSKIT 68

[Close]

BLAST of CmoCh01G004980 vs. ExPASy Swiss-Prot
Match: Q8CH72 (E3 ubiquitin-protein ligase TRIM32 OS=Mus musculus OX=10090 GN=Trim32 PE=1 SV=2)

HSP 1 Score: 50.8 bits (120), Expect = 2.7e-05
Identity = 25/78 (32.05%), Postives = 40/78 (51.28%), Query Frame = 0


Query: 26  ATECSDDEVSSDGREEVLECPICWESFNIVENVPHVLWCGHTLCKNCILGLQWAVVKFPT 85
           A   +   ++ D   EVLECPIC ESF   +  P +L CGHT+C+ C+  L  + +    
Sbjct: 2   AAAAAASHLNLDALREVLECPICMESFTEEQLRPKLLHCGHTICRQCLEKLLASSIN--- 61

Query: 86  LPVQLPLFISCPWCNLLS 104
                   + CP+C+ ++
Sbjct: 62  -------GVRCPFCSKIT 69

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BLAST of CmoCh01G004980 vs. ExPASy Swiss-Prot
Match: Q9H0X6 (RING finger protein 208 OS=Homo sapiens OX=9606 GN=RNF208 PE=1 SV=2)

HSP 1 Score: 50.1 bits (118), Expect = 4.6e-05
Identity = 26/70 (37.14%), Postives = 35/70 (50.00%), Query Frame = 0


Query: 30  SDDEVSSDGREEVLECPICWESFNIVENVPHVLWCGHTLCKNCILGLQWAVVKFPTLPVQ 89
           S    SS    E LECP C  S+N+ +  P VL C H++C+ C+  L  +  K+      
Sbjct: 128 SASAASSAAAGEPLECPTCGHSYNVTQRRPRVLSCLHSVCEQCLQILYESCPKYK----- 187

Query: 90  LPLFISCPWC 100
              FISCP C
Sbjct: 188 ---FISCPTC 189

[Close]

BLAST of CmoCh01G004980 vs. ExPASy Swiss-Prot
Match: Q8K0W3 (RING finger protein 208 OS=Mus musculus OX=10090 GN=Rnf208 PE=1 SV=2)

HSP 1 Score: 48.5 bits (114), Expect = 1.3e-04
Identity = 22/60 (36.67%), Postives = 33/60 (55.00%), Query Frame = 0


Query: 41  EVLECPICWESFNIVENVPHVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCN 100
           E LECP C  ++N+ +  P VL C H++C+ C+  L  +  K+         FISCP C+
Sbjct: 143 EPLECPTCGHTYNVTQRRPRVLSCLHSVCEQCLQILYESCPKYK--------FISCPTCH 194

[Close]

BLAST of CmoCh01G004980 vs. ExPASy TrEMBL
Match: A0A6J1GC00 (uncharacterized protein LOC111452589 OS=Cucurbita moschata OX=3662 GN=LOC111452589 PE=4 SV=1)

HSP 1 Score: 528.1 bits (1359), Expect = 2.1e-146
Identity = 264/264 (100.00%), Postives = 264/264 (100.00%), Query Frame = 0


Query: 1   MWNFASNCVAGCTGLKSSSQKLTHTATECSDDEVSSDGREEVLECPICWESFNIVENVPH 60
           MWNFASNCVAGCTGLKSSSQKLTHTATECSDDEVSSDGREEVLECPICWESFNIVENVPH
Sbjct: 1   MWNFASNCVAGCTGLKSSSQKLTHTATECSDDEVSSDGREEVLECPICWESFNIVENVPH 60

Query: 61  VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNYF 120
           VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNYF
Sbjct: 61  VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNYF 120

Query: 121 LLWMVENMNGERVKSRSDFSGDQLVFPVSGNSRSNQVGHSNLRRGHHVRQLDPQRPNNAN 180
           LLWMVENMNGERVKSRSDFSGDQLVFPVSGNSRSNQVGHSNLRRGHHVRQLDPQRPNNAN
Sbjct: 121 LLWMVENMNGERVKSRSDFSGDQLVFPVSGNSRSNQVGHSNLRRGHHVRQLDPQRPNNAN 180

Query: 181 SHAHSFNLERLKSSLCKLLVFFVHLTAKFPLVIIFLLIILYAVPASAAILALYILVTVLF 240
           SHAHSFNLERLKSSLCKLLVFFVHLTAKFPLVIIFLLIILYAVPASAAILALYILVTVLF
Sbjct: 181 SHAHSFNLERLKSSLCKLLVFFVHLTAKFPLVIIFLLIILYAVPASAAILALYILVTVLF 240

Query: 241 ALPSFLILYFAYPSLDWLMREIIT 265
           ALPSFLILYFAYPSLDWLMREIIT
Sbjct: 241 ALPSFLILYFAYPSLDWLMREIIT 264

[Close]

BLAST of CmoCh01G004980 vs. ExPASy TrEMBL
Match: A0A6J1K9F8 (uncharacterized protein LOC111492874 OS=Cucurbita maxima OX=3661 GN=LOC111492874 PE=4 SV=1)

HSP 1 Score: 516.9 bits (1330), Expect = 4.9e-143
Identity = 260/264 (98.48%), Postives = 260/264 (98.48%), Query Frame = 0


Query: 1   MWNFASNCVAGCTGLKSSSQKLTHTATECSDDEVSSDGREEVLECPICWESFNIVENVPH 60
           MWNFASNCVAGCTGLKS SQK THTATECSDDEVSSDGREEVLECPICWESFNIVENVPH
Sbjct: 1   MWNFASNCVAGCTGLKSGSQKPTHTATECSDDEVSSDGREEVLECPICWESFNIVENVPH 60

Query: 61  VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNYF 120
           VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNYF
Sbjct: 61  VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNYF 120

Query: 121 LLWMVENMNGERVKSRSDFSGDQLVFPVSGNSRSNQVGHSNLRRGHHVRQLDPQRPNNAN 180
           LLWMVENMNGERVKSRSDFSGDQLVFPVSGNSRSNQVGHSNLRRGHHVRQLD QR NNAN
Sbjct: 121 LLWMVENMNGERVKSRSDFSGDQLVFPVSGNSRSNQVGHSNLRRGHHVRQLDLQRSNNAN 180

Query: 181 SHAHSFNLERLKSSLCKLLVFFVHLTAKFPLVIIFLLIILYAVPASAAILALYILVTVLF 240
           SHAHSFNLERLKSSLCKLLVFFVHLTAKFPLVIIFLLIILYAVPASAAILALYILVTVLF
Sbjct: 181 SHAHSFNLERLKSSLCKLLVFFVHLTAKFPLVIIFLLIILYAVPASAAILALYILVTVLF 240

Query: 241 ALPSFLILYFAYPSLDWLMREIIT 265
           ALPSFLILYFAYPSLDWLMREIIT
Sbjct: 241 ALPSFLILYFAYPSLDWLMREIIT 264

[Close]

BLAST of CmoCh01G004980 vs. ExPASy TrEMBL
Match: A0A0A0K8G4 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G042350 PE=4 SV=1)

HSP 1 Score: 483.0 bits (1242), Expect = 7.8e-133
Identity = 244/265 (92.08%), Postives = 253/265 (95.47%), Query Frame = 0


Query: 1   MWNFASNCVAGCTGLKSSSQKLTHTATECSDDEVSSDGREEVLECPICWESFNIVENVPH 60
           MWNFASNCVAGC GLKSSS+K +HTATECSDDE+SSDGREEVLECPICWESFNIVENVPH
Sbjct: 1   MWNFASNCVAGCAGLKSSSRKSSHTATECSDDELSSDGREEVLECPICWESFNIVENVPH 60

Query: 61  VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNYF 120
           VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNYF
Sbjct: 61  VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNYF 120

Query: 121 LLWMVENMNGERVKSRSDFSGDQLVFPVSG-NSRSNQVGHSNLRRGHHVRQLDPQRPNNA 180
           LLWMVEN+N ERVKS S FSGDQLVFPVSG +SR NQV H+NLRRGHHVRQLD Q PNNA
Sbjct: 121 LLWMVENINVERVKSHSAFSGDQLVFPVSGTSSRGNQVSHNNLRRGHHVRQLDSQGPNNA 180

Query: 181 NSHAHSFNLERLKSSLCKLLVFFVHLTAKFPLVIIFLLIILYAVPASAAILALYILVTVL 240
           NSH HSFNLERL+SSL KLLVFFVHLTAKFPLVIIFLLI+LYAVPASAAILALY+LVTVL
Sbjct: 181 NSHFHSFNLERLQSSLRKLLVFFVHLTAKFPLVIIFLLIVLYAVPASAAILALYVLVTVL 240

Query: 241 FALPSFLILYFAYPSLDWLMREIIT 265
           FALPSFLILYFAYPSLDWLMREIIT
Sbjct: 241 FALPSFLILYFAYPSLDWLMREIIT 265

[Close]

BLAST of CmoCh01G004980 vs. ExPASy TrEMBL
Match: A0A1S3BDF4 (uncharacterized protein LOC103488671 OS=Cucumis melo OX=3656 GN=LOC103488671 PE=4 SV=1)

HSP 1 Score: 476.9 bits (1226), Expect = 5.6e-131
Identity = 240/265 (90.57%), Postives = 252/265 (95.09%), Query Frame = 0


Query: 1   MWNFASNCVAGCTGLKSSSQKLTHTATECSDDEVSSDGREEVLECPICWESFNIVENVPH 60
           MWNFASNCVAGC GLKSSS+K +HTATECSDDE+SSDGREEVLECPICWESFNIVENVPH
Sbjct: 1   MWNFASNCVAGCAGLKSSSRKTSHTATECSDDELSSDGREEVLECPICWESFNIVENVPH 60

Query: 61  VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNYF 120
           VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNYF
Sbjct: 61  VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNYF 120

Query: 121 LLWMVENMNGERVKSRSDFSGDQLVFPVSG-NSRSNQVGHSNLRRGHHVRQLDPQRPNNA 180
           LLWMVEN+N ERVKS S FSGD L+FPVSG +SR NQV H+NLRRGHHVRQLD Q PN+A
Sbjct: 121 LLWMVENINVERVKSHSAFSGDPLIFPVSGSSSRVNQVSHNNLRRGHHVRQLDSQGPNSA 180

Query: 181 NSHAHSFNLERLKSSLCKLLVFFVHLTAKFPLVIIFLLIILYAVPASAAILALYILVTVL 240
           NSH H+FNLERL+SSL KLLVFFVHLTAKFPLVIIFLLI+LYAVPASAAILALY+LVTVL
Sbjct: 181 NSHFHNFNLERLQSSLRKLLVFFVHLTAKFPLVIIFLLIVLYAVPASAAILALYVLVTVL 240

Query: 241 FALPSFLILYFAYPSLDWLMREIIT 265
           FALPSFLILYFAYPSLDWLMREIIT
Sbjct: 241 FALPSFLILYFAYPSLDWLMREIIT 265

[Close]

BLAST of CmoCh01G004980 vs. ExPASy TrEMBL
Match: A0A5D3BZF8 (RING-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold121G00650 PE=4 SV=1)

HSP 1 Score: 476.9 bits (1226), Expect = 5.6e-131
Identity = 240/265 (90.57%), Postives = 252/265 (95.09%), Query Frame = 0


Query: 1   MWNFASNCVAGCTGLKSSSQKLTHTATECSDDEVSSDGREEVLECPICWESFNIVENVPH 60
           MWNFASNCVAGC GLKSSS+K +HTATECSDDE+SSDGREEVLECPICWESFNIVENVPH
Sbjct: 1   MWNFASNCVAGCAGLKSSSRKTSHTATECSDDELSSDGREEVLECPICWESFNIVENVPH 60

Query: 61  VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNYF 120
           VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNYF
Sbjct: 61  VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNYF 120

Query: 121 LLWMVENMNGERVKSRSDFSGDQLVFPVSG-NSRSNQVGHSNLRRGHHVRQLDPQRPNNA 180
           LLWMVEN+N ERVKS S FSGD L+FPVSG +SR NQV H+NLRRGHHVRQLD Q PN+A
Sbjct: 121 LLWMVENINVERVKSHSAFSGDPLIFPVSGSSSRVNQVSHNNLRRGHHVRQLDSQGPNSA 180

Query: 181 NSHAHSFNLERLKSSLCKLLVFFVHLTAKFPLVIIFLLIILYAVPASAAILALYILVTVL 240
           NSH H+FNLERL+SSL KLLVFFVHLTAKFPLVIIFLLI+LYAVPASAAILALY+LVTVL
Sbjct: 181 NSHFHNFNLERLQSSLRKLLVFFVHLTAKFPLVIIFLLIVLYAVPASAAILALYVLVTVL 240

Query: 241 FALPSFLILYFAYPSLDWLMREIIT 265
           FALPSFLILYFAYPSLDWLMREIIT
Sbjct: 241 FALPSFLILYFAYPSLDWLMREIIT 265

[Close]

BLAST of CmoCh01G004980 vs. NCBI nr
Match: XP_022949151.1 (uncharacterized protein LOC111452589 [Cucurbita moschata] >XP_022949153.1 uncharacterized protein LOC111452589 [Cucurbita moschata] >XP_022949154.1 uncharacterized protein LOC111452589 [Cucurbita moschata] >XP_022949155.1 uncharacterized protein LOC111452589 [Cucurbita moschata] >XP_022949156.1 uncharacterized protein LOC111452589 [Cucurbita moschata] >XP_022949157.1 uncharacterized protein LOC111452589 [Cucurbita moschata])

HSP 1 Score: 528.1 bits (1359), Expect = 4.4e-146
Identity = 264/264 (100.00%), Postives = 264/264 (100.00%), Query Frame = 0


Query: 1   MWNFASNCVAGCTGLKSSSQKLTHTATECSDDEVSSDGREEVLECPICWESFNIVENVPH 60
           MWNFASNCVAGCTGLKSSSQKLTHTATECSDDEVSSDGREEVLECPICWESFNIVENVPH
Sbjct: 1   MWNFASNCVAGCTGLKSSSQKLTHTATECSDDEVSSDGREEVLECPICWESFNIVENVPH 60

Query: 61  VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNYF 120
           VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNYF
Sbjct: 61  VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNYF 120

Query: 121 LLWMVENMNGERVKSRSDFSGDQLVFPVSGNSRSNQVGHSNLRRGHHVRQLDPQRPNNAN 180
           LLWMVENMNGERVKSRSDFSGDQLVFPVSGNSRSNQVGHSNLRRGHHVRQLDPQRPNNAN
Sbjct: 121 LLWMVENMNGERVKSRSDFSGDQLVFPVSGNSRSNQVGHSNLRRGHHVRQLDPQRPNNAN 180

Query: 181 SHAHSFNLERLKSSLCKLLVFFVHLTAKFPLVIIFLLIILYAVPASAAILALYILVTVLF 240
           SHAHSFNLERLKSSLCKLLVFFVHLTAKFPLVIIFLLIILYAVPASAAILALYILVTVLF
Sbjct: 181 SHAHSFNLERLKSSLCKLLVFFVHLTAKFPLVIIFLLIILYAVPASAAILALYILVTVLF 240

Query: 241 ALPSFLILYFAYPSLDWLMREIIT 265
           ALPSFLILYFAYPSLDWLMREIIT
Sbjct: 241 ALPSFLILYFAYPSLDWLMREIIT 264

[Close]

BLAST of CmoCh01G004980 vs. NCBI nr
Match: XP_023523716.1 (uncharacterized protein LOC111787870 [Cucurbita pepo subsp. pepo] >XP_023523718.1 uncharacterized protein LOC111787870 [Cucurbita pepo subsp. pepo] >XP_023523719.1 uncharacterized protein LOC111787870 [Cucurbita pepo subsp. pepo] >XP_023523720.1 uncharacterized protein LOC111787870 [Cucurbita pepo subsp. pepo] >XP_023523721.1 uncharacterized protein LOC111787870 [Cucurbita pepo subsp. pepo] >XP_023523722.1 uncharacterized protein LOC111787870 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 523.9 bits (1348), Expect = 8.3e-145
Identity = 262/264 (99.24%), Postives = 262/264 (99.24%), Query Frame = 0


Query: 1   MWNFASNCVAGCTGLKSSSQKLTHTATECSDDEVSSDGREEVLECPICWESFNIVENVPH 60
           MWNFASNCVAGCTGLKS SQK THTATECSDDEVSSDGREEVLECPICWESFNIVENVPH
Sbjct: 1   MWNFASNCVAGCTGLKSGSQKPTHTATECSDDEVSSDGREEVLECPICWESFNIVENVPH 60

Query: 61  VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNYF 120
           VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNYF
Sbjct: 61  VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNYF 120

Query: 121 LLWMVENMNGERVKSRSDFSGDQLVFPVSGNSRSNQVGHSNLRRGHHVRQLDPQRPNNAN 180
           LLWMVENMNGERVKSRSDFSGDQLVFPVSGNSRSNQVGHSNLRRGHHVRQLDPQRPNNAN
Sbjct: 121 LLWMVENMNGERVKSRSDFSGDQLVFPVSGNSRSNQVGHSNLRRGHHVRQLDPQRPNNAN 180

Query: 181 SHAHSFNLERLKSSLCKLLVFFVHLTAKFPLVIIFLLIILYAVPASAAILALYILVTVLF 240
           SHAHSFNLERLKSSLCKLLVFFVHLTAKFPLVIIFLLIILYAVPASAAILALYILVTVLF
Sbjct: 181 SHAHSFNLERLKSSLCKLLVFFVHLTAKFPLVIIFLLIILYAVPASAAILALYILVTVLF 240

Query: 241 ALPSFLILYFAYPSLDWLMREIIT 265
           ALPSFLILYFAYPSLDWLMREIIT
Sbjct: 241 ALPSFLILYFAYPSLDWLMREIIT 264

[Close]

BLAST of CmoCh01G004980 vs. NCBI nr
Match: KAG7036804.1 (hypothetical protein SDJN02_00424, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 523.9 bits (1348), Expect = 8.3e-145
Identity = 262/264 (99.24%), Postives = 262/264 (99.24%), Query Frame = 0


Query: 1   MWNFASNCVAGCTGLKSSSQKLTHTATECSDDEVSSDGREEVLECPICWESFNIVENVPH 60
           MWNFASNCVAGCTGLKSSSQK THTATECSDDEVSSDGREEVLECPICWESFNIVENVPH
Sbjct: 1   MWNFASNCVAGCTGLKSSSQKPTHTATECSDDEVSSDGREEVLECPICWESFNIVENVPH 60

Query: 61  VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNYF 120
           VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNYF
Sbjct: 61  VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNYF 120

Query: 121 LLWMVENMNGERVKSRSDFSGDQLVFPVSGNSRSNQVGHSNLRRGHHVRQLDPQRPNNAN 180
           LLWMVENMNGERVKSRSDFSGDQLVFPVSGNSRSNQVGHSNLRRGHHVRQLDPQRPNN N
Sbjct: 121 LLWMVENMNGERVKSRSDFSGDQLVFPVSGNSRSNQVGHSNLRRGHHVRQLDPQRPNNTN 180

Query: 181 SHAHSFNLERLKSSLCKLLVFFVHLTAKFPLVIIFLLIILYAVPASAAILALYILVTVLF 240
           SHAHSFNLERLKSSLCKLLVFFVHLTAKFPLVIIFLLIILYAVPASAAILALYILVTVLF
Sbjct: 181 SHAHSFNLERLKSSLCKLLVFFVHLTAKFPLVIIFLLIILYAVPASAAILALYILVTVLF 240

Query: 241 ALPSFLILYFAYPSLDWLMREIIT 265
           ALPSFLILYFAYPSLDWLMREIIT
Sbjct: 241 ALPSFLILYFAYPSLDWLMREIIT 264

[Close]

BLAST of CmoCh01G004980 vs. NCBI nr
Match: XP_022998137.1 (uncharacterized protein LOC111492874 [Cucurbita maxima] >XP_022998138.1 uncharacterized protein LOC111492874 [Cucurbita maxima] >XP_022998139.1 uncharacterized protein LOC111492874 [Cucurbita maxima] >XP_022998140.1 uncharacterized protein LOC111492874 [Cucurbita maxima] >XP_022998141.1 uncharacterized protein LOC111492874 [Cucurbita maxima])

HSP 1 Score: 516.9 bits (1330), Expect = 1.0e-142
Identity = 260/264 (98.48%), Postives = 260/264 (98.48%), Query Frame = 0


Query: 1   MWNFASNCVAGCTGLKSSSQKLTHTATECSDDEVSSDGREEVLECPICWESFNIVENVPH 60
           MWNFASNCVAGCTGLKS SQK THTATECSDDEVSSDGREEVLECPICWESFNIVENVPH
Sbjct: 1   MWNFASNCVAGCTGLKSGSQKPTHTATECSDDEVSSDGREEVLECPICWESFNIVENVPH 60

Query: 61  VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNYF 120
           VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNYF
Sbjct: 61  VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNYF 120

Query: 121 LLWMVENMNGERVKSRSDFSGDQLVFPVSGNSRSNQVGHSNLRRGHHVRQLDPQRPNNAN 180
           LLWMVENMNGERVKSRSDFSGDQLVFPVSGNSRSNQVGHSNLRRGHHVRQLD QR NNAN
Sbjct: 121 LLWMVENMNGERVKSRSDFSGDQLVFPVSGNSRSNQVGHSNLRRGHHVRQLDLQRSNNAN 180

Query: 181 SHAHSFNLERLKSSLCKLLVFFVHLTAKFPLVIIFLLIILYAVPASAAILALYILVTVLF 240
           SHAHSFNLERLKSSLCKLLVFFVHLTAKFPLVIIFLLIILYAVPASAAILALYILVTVLF
Sbjct: 181 SHAHSFNLERLKSSLCKLLVFFVHLTAKFPLVIIFLLIILYAVPASAAILALYILVTVLF 240

Query: 241 ALPSFLILYFAYPSLDWLMREIIT 265
           ALPSFLILYFAYPSLDWLMREIIT
Sbjct: 241 ALPSFLILYFAYPSLDWLMREIIT 264

[Close]

BLAST of CmoCh01G004980 vs. NCBI nr
Match: KAG6607114.1 (hypothetical protein SDJN03_00456, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 502.7 bits (1293), Expect = 2.0e-138
Identity = 252/255 (98.82%), Postives = 252/255 (98.82%), Query Frame = 0


Query: 1   MWNFASNCVAGCTGLKSSSQKLTHTATECSDDEVSSDGREEVLECPICWESFNIVENVPH 60
           MWNFASNCVAGCTGLKSSSQK THTATECSDDEVSSDGREEVLECPICWESFNIVENVPH
Sbjct: 1   MWNFASNCVAGCTGLKSSSQKPTHTATECSDDEVSSDGREEVLECPICWESFNIVENVPH 60

Query: 61  VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNYF 120
           VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNYF
Sbjct: 61  VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNYF 120

Query: 121 LLWMVENMNGERVKSRSDFSGDQLVFPVSGNSRSNQVGHSNLRRGHHVRQLDPQRPNNAN 180
           LLWMVENMNGERVKSRSDFSGDQLVFPVSGNSRSNQVGHSNLRRGHHVRQLDPQRPNN N
Sbjct: 121 LLWMVENMNGERVKSRSDFSGDQLVFPVSGNSRSNQVGHSNLRRGHHVRQLDPQRPNNTN 180

Query: 181 SHAHSFNLERLKSSLCKLLVFFVHLTAKFPLVIIFLLIILYAVPASAAILALYILVTVLF 240
           SHAHSFNLERLKSSLCKLLVFFVHLTAKFPLVIIFLLIILYAVPASAAILALYILVTVLF
Sbjct: 181 SHAHSFNLERLKSSLCKLLVFFVHLTAKFPLVIIFLLIILYAVPASAAILALYILVTVLF 240

Query: 241 ALPSFLILYFAYPSL 256
           ALPSFLILYFAYP L
Sbjct: 241 ALPSFLILYFAYPRL 255

[Close]

BLAST of CmoCh01G004980 vs. TAIR 10
Match: AT3G29270.1 (RING/U-box superfamily protein )

HSP 1 Score: 310.5 bits (794), Expect = 1.3e-84
Identity = 167/265 (63.02%), Postives = 195/265 (73.58%), Query Frame = 0


Query: 1   MWNFASNCVAGCTGLKSSSQKLTHTATECSDDEVSSDG-REEVLECPICWESFNIVENVP 60
           MWN AS+ + G  G K+  ++  H   ECSDD+VSS G ++E LECPICWESFNIVENVP
Sbjct: 9   MWNLASSYLTGNIGPKNDIRRPVHAHAECSDDDVSSVGSKDEGLECPICWESFNIVENVP 68

Query: 61  HVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNY 120
           +VLWCGHT+CKNCILGLQWA+VK PT PVQLPLFISCPWCNLLSFRLV++G L+FP KNY
Sbjct: 69  YVLWCGHTMCKNCILGLQWAIVKLPTHPVQLPLFISCPWCNLLSFRLVFRGTLRFPHKNY 128

Query: 121 FLLWMVENMNGERVKSRSDFSGDQLVFPVSGNSRSNQVGHSNLRRGHHVRQLDPQRPNNA 180
           F+LWMVE MNGER  S      D        N  + +     L   HH  Q +P R  N 
Sbjct: 129 FVLWMVERMNGERRNSPGGAQTD------GNNDHTRETPSPCLHNRHHRSQPEPSRSVN- 188

Query: 181 NSHAHSFNLERLKSSLCKLLVFFVHLTAKFPLVIIFLLIILYAVPASAAILALYILVTVL 240
               H    + +++SL K LVFFV LTAKFPLV+IFLLIILYA+P SAAILA+YILVT+L
Sbjct: 189 ---DHRIPRDNIQTSLRKSLVFFVQLTAKFPLVVIFLLIILYAIPTSAAILAMYILVTLL 248

Query: 241 FALPSFLILYFAYPSLDWLMREIIT 265
            ALPSFLILYFAYP LDWL+REI+T
Sbjct: 249 LALPSFLILYFAYPCLDWLVREIVT 263

[Close]

BLAST of CmoCh01G004980 vs. TAIR 10
Match: AT3G29270.2 (RING/U-box superfamily protein )

HSP 1 Score: 310.5 bits (794), Expect = 1.3e-84
Identity = 167/265 (63.02%), Postives = 195/265 (73.58%), Query Frame = 0


Query: 1   MWNFASNCVAGCTGLKSSSQKLTHTATECSDDEVSSDG-REEVLECPICWESFNIVENVP 60
           MWN AS+ + G  G K+  ++  H   ECSDD+VSS G ++E LECPICWESFNIVENVP
Sbjct: 9   MWNLASSYLTGNIGPKNDIRRPVHAHAECSDDDVSSVGSKDEGLECPICWESFNIVENVP 68

Query: 61  HVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNY 120
           +VLWCGHT+CKNCILGLQWA+VK PT PVQLPLFISCPWCNLLSFRLV++G L+FP KNY
Sbjct: 69  YVLWCGHTMCKNCILGLQWAIVKLPTHPVQLPLFISCPWCNLLSFRLVFRGTLRFPHKNY 128

Query: 121 FLLWMVENMNGERVKSRSDFSGDQLVFPVSGNSRSNQVGHSNLRRGHHVRQLDPQRPNNA 180
           F+LWMVE MNGER  S      D        N  + +     L   HH  Q +P R  N 
Sbjct: 129 FVLWMVERMNGERRNSPGGAQTD------GNNDHTRETPSPCLHNRHHRSQPEPSRSVN- 188

Query: 181 NSHAHSFNLERLKSSLCKLLVFFVHLTAKFPLVIIFLLIILYAVPASAAILALYILVTVL 240
               H    + +++SL K LVFFV LTAKFPLV+IFLLIILYA+P SAAILA+YILVT+L
Sbjct: 189 ---DHRIPRDNIQTSLRKSLVFFVQLTAKFPLVVIFLLIILYAIPTSAAILAMYILVTLL 248

Query: 241 FALPSFLILYFAYPSLDWLMREIIT 265
            ALPSFLILYFAYP LDWL+REI+T
Sbjct: 249 LALPSFLILYFAYPCLDWLVREIVT 263

[Close]

BLAST of CmoCh01G004980 vs. TAIR 10
Match: AT1G69330.1 (RING/U-box superfamily protein )

HSP 1 Score: 250.8 bits (639), Expect = 1.3e-66
Identity = 142/271 (52.40%), Postives = 180/271 (66.42%), Query Frame = 0


Query: 1   MWNFASNCVAGCTGLKSSSQKLTHTATECSDDEVSSDGR-EEVLECPICWESFNIVENVP 60
           MW FASN V G  GLK S +     +++CSDDEVS+  R EE LECPICWESFNIVENVP
Sbjct: 1   MWGFASN-VIGSMGLKKSPKDSAQASSQCSDDEVSNISRDEEGLECPICWESFNIVENVP 60

Query: 61  HVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNY 120
           +VLWCGHTLC+NC+ GLQ AV++  +  +++P F+SCPWC LLSFR+VYKGNLKFP KN+
Sbjct: 61  YVLWCGHTLCQNCVFGLQSAVLRLSSQDIRIPFFVSCPWCQLLSFRIVYKGNLKFPRKNF 120

Query: 121 FLLWMVENMNGERVKSRSDFSGDQLVFPVSGNSRSNQVGHSNLRRGHHVRQ--------L 180
           FLLWMVE++NG+R       S   L   V+ N +S      ++  G+H           L
Sbjct: 121 FLLWMVESLNGDRTSHGDRTSHGSL---VTDNQQSAPTPRCSMSLGNHSSNNNLVARPLL 180

Query: 181 DPQRPNNANSHAHSFNLERLKSSLCKLLVFFVHLTAKFPLVIIFLLIILYAVPASAAILA 240
             Q  +    H HS    R   S  K L FF+  T+KFP VIIFLLI+ +A+P S  ILA
Sbjct: 181 RNQSTDLLPHHDHSNQPSRQLFSFHKSLDFFISFTSKFPFVIIFLLIVFFAIPGSLIILA 240

Query: 241 LYILVTVLFALPSFLILYFAYPSLDWLMREI 263
           LY L+T+LFA+P+ L+LYFAYP L+ L+ EI
Sbjct: 241 LYFLLTILFAVPAGLVLYFAYPILERLVNEI 267

[Close]

BLAST of CmoCh01G004980 vs. TAIR 10
Match: AT1G74370.1 (RING/U-box superfamily protein )

HSP 1 Score: 223.8 bits (569), Expect = 1.6e-58
Identity = 135/269 (50.19%), Postives = 172/269 (63.94%), Query Frame = 0


Query: 1   MWNFASNCVAGCTGLKSSSQKLTHTATECSDDEVSSDGR----EEVLECPICWESFNIVE 60
           MWN AS  +    G  S  ++        + D  S DGR    EE LECPICWESFN+VE
Sbjct: 1   MWNLASKSIR--EGFISKGEEAATKPRRATLDR-SGDGRKTTKEEKLECPICWESFNVVE 60

Query: 61  NVPHVLWCGHTLCKNCILGLQWA-VVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFP 120
           NVP+VLWCGHT+CK C+LGLQ A V+K   LP QLP F++CPWCN+LS RLV  G ++FP
Sbjct: 61  NVPYVLWCGHTICKYCLLGLQRAIVIKSSALPFQLPFFVACPWCNILSLRLVCNGTIRFP 120

Query: 121 CKNYFLLWMVENMNGERVKSRSDFSGDQLVFPVSGNSRSNQVGHSNLRRGHHVRQLDPQR 180
            KN++LLWMVE+MNG R ++ SD   ++ V     + R+   G SN   G     LD + 
Sbjct: 121 SKNFYLLWMVESMNGSRSEAPSD---NKRVASGQRDLRNRCDGVSNTALGDE-GLLDNRS 180

Query: 181 PNNANSHAHSFNLERLKSSLCKLLVFFVHLTAKFPLVIIFLLIILYAVPASAAILALYIL 240
             N  +    F   RL  S+ K +    HL AKFPLV+IFLL+ LYA+P SAA+L +Y  
Sbjct: 181 WWNGVTRGF-FRTGRLHDSVRKSMALVAHLLAKFPLVVIFLLMALYAIPVSAAVLGVYFF 240

Query: 241 VTVLFALPSFLILYFAYPSLDWLMREIIT 265
           VT   A+PSFL+LYFA+PSL+WL+REI T
Sbjct: 241 VTFALAVPSFLVLYFAFPSLNWLIREIAT 261

[Close]

BLAST of CmoCh01G004980 vs. TAIR 10
Match: AT1G21651.1 (zinc ion binding )

HSP 1 Score: 50.1 bits (118), Expect = 3.3e-06
Identity = 23/59 (38.98%), Postives = 31/59 (52.54%), Query Frame = 0


Query: 44  ECPICWESFNIVENVPHVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLL 103
           ECP+C +S++    VP VL CGHT C+ C+            LP + P  I CP C +L
Sbjct: 5   ECPVCLQSYDGESTVPRVLACGHTACEECL----------TNLPKKFPDTIRCPACTVL 53

The following BLAST results are available for this feature:

BLAST of CmoCh01G004980 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q13049	2.7e-05	35.82	E3 ubiquitin-protein ligase TRIM32 OS=Homo sapiens OX=9606 GN=TRIM32 PE=1 SV=2	[more]
Q8CH72	2.7e-05	32.05	E3 ubiquitin-protein ligase TRIM32 OS=Mus musculus OX=10090 GN=Trim32 PE=1 SV=2	[more]
Q9H0X6	4.6e-05	37.14	RING finger protein 208 OS=Homo sapiens OX=9606 GN=RNF208 PE=1 SV=2	[more]
Q8K0W3	1.3e-04	36.67	RING finger protein 208 OS=Mus musculus OX=10090 GN=Rnf208 PE=1 SV=2	[more]

BLAST of CmoCh01G004980 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GC00	2.1e-146	100.00	uncharacterized protein LOC111452589 OS=Cucurbita moschata OX=3662 GN=LOC1114525...	[more]
A0A6J1K9F8	4.9e-143	98.48	uncharacterized protein LOC111492874 OS=Cucurbita maxima OX=3661 GN=LOC111492874...	[more]
A0A0A0K8G4	7.8e-133	92.08	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G042350 P...	[more]
A0A1S3BDF4	5.6e-131	90.57	uncharacterized protein LOC103488671 OS=Cucumis melo OX=3656 GN=LOC103488671 PE=...	[more]
A0A5D3BZF8	5.6e-131	90.57	RING-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]

BLAST of CmoCh01G004980 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022949151.1	4.4e-146	100.00	uncharacterized protein LOC111452589 [Cucurbita moschata] >XP_022949153.1 unchar...	[more]
XP_023523716.1	8.3e-145	99.24	uncharacterized protein LOC111787870 [Cucurbita pepo subsp. pepo] >XP_023523718....	[more]
KAG7036804.1	8.3e-145	99.24	hypothetical protein SDJN02_00424, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022998137.1	1.0e-142	98.48	uncharacterized protein LOC111492874 [Cucurbita maxima] >XP_022998138.1 uncharac...	[more]
KAG6607114.1	2.0e-138	98.82	hypothetical protein SDJN03_00456, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of CmoCh01G004980 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G29270.1	1.3e-84	63.02	RING/U-box superfamily protein	[more]
AT3G29270.2	1.3e-84	63.02	RING/U-box superfamily protein	[more]
AT1G69330.1	1.3e-66	52.40	RING/U-box superfamily protein	[more]
AT1G74370.1	1.6e-58	50.19	RING/U-box superfamily protein	[more]
AT1G21651.1	3.3e-06	38.98	zinc ion binding	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 32..137 e-value: 1.3E-11 score: 45.8
IPR027370	RING-type zinc-finger, LisH dimerisation motif	PFAM	PF13445	zf-RING_UBOX	coord: 45..84 e-value: 7.4E-8 score: 32.3
None	No IPR available	PANTHER	PTHR46616	UBIQUITIN-PROTEIN LIGASE	coord: 1..264
None	No IPR available	PANTHER	PTHR46616:SF9	OS03G0211100 PROTEIN	coord: 1..264
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 40..102
IPR017907	Zinc finger, RING-type, conserved site	PROSITE	PS00518	ZF_RING_1	coord: 64..73
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 45..100 score: 10.158304

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh01G004980.1	CmoCh01G004980.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016310	phosphorylation
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0016301	kinase activity
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0004842	ubiquitin-protein transferase activity