CmoCh01G004290 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh01G004290
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Homeobox Hox-B3-like protein
Location	Cmo_Chr01: 2102866 .. 2103501 (+)
RNA-Seq Expression	CmoCh01G004290
Synteny	CmoCh01G004290

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGACAATTTCGATCATCAGTCCCAAACCCATCTCTCCTTTCATTCCATCGACCCCAGATCCCTCCTCCTCCACCAGAACTCCGCCACCCACCACTACTTTCCTCTCCAGCTCACTGCGGAGACTTTTTCCATGGAAAGAGGACCAAGGTACAGAGCCTACGCAGAGCTTAGAGAATCCAAGCTCCGATTGAGAAACGCCATGTACCGTGACGGCGAACAGCCCGAGAAATCCACGCCACCGGCGAAGAAGCAAGTGAGATTCGTGGGTTCAGAGACCGTTCGGAAAAGGTCGGCAACAGTAGCGCAATCGGTGCCGGATTTCTCTGCTGTATTGCGGAAGGAGAACAGAAGACCTCCGCCGGGGCTGTCGCCGGTGATGGAGATGACCCCGCCAGGGAAGACGTGGGGGAAGAATAACATTGGAGGGATATCGGCGAATTCGAGGGGGAGTAAGTCAGCGAGTGCAGGGGAGAAAAGGGGCGGAGGGTTGGCGGCGGCAAGGAAGAGCTACGCTGGATTTGAGGAGCTGAAGGGGTTTTCTACTGCGGCGGCAAACGCCATTAACGGTGAAAACAAGAGAGGAGGAGGTGGAAGGAGAGGGAAGACTGTATTGGGTGTTAGACAGATTTGA

mRNA sequence

ATGGCGGACAATTTCGATCATCAGTCCCAAACCCATCTCTCCTTTCATTCCATCGACCCCAGATCCCTCCTCCTCCACCAGAACTCCGCCACCCACCACTACTTTCCTCTCCAGCTCACTGCGGAGACTTTTTCCATGGAAAGAGGACCAAGGTACAGAGCCTACGCAGAGCTTAGAGAATCCAAGCTCCGATTGAGAAACGCCATGTACCGTGACGGCGAACAGCCCGAGAAATCCACGCCACCGGCGAAGAAGCAAGTGAGATTCGTGGGTTCAGAGACCGTTCGGAAAAGGTCGGCAACAGTAGCGCAATCGGTGCCGGATTTCTCTGCTGTATTGCGGAAGGAGAACAGAAGACCTCCGCCGGGGCTGTCGCCGGTGATGGAGATGACCCCGCCAGGGAAGACGTGGGGGAAGAATAACATTGGAGGGATATCGGCGAATTCGAGGGGGAGTAAGTCAGCGAGTGCAGGGGAGAAAAGGGGCGGAGGGTTGGCGGCGGCAAGGAAGAGCTACGCTGGATTTGAGGAGCTGAAGGGGTTTTCTACTGCGGCGGCAAACGCCATTAACGGTGAAAACAAGAGAGGAGGAGGTGGAAGGAGAGGGAAGACTGTATTGGGTGTTAGACAGATTTGA

Coding sequence (CDS)

ATGGCGGACAATTTCGATCATCAGTCCCAAACCCATCTCTCCTTTCATTCCATCGACCCCAGATCCCTCCTCCTCCACCAGAACTCCGCCACCCACCACTACTTTCCTCTCCAGCTCACTGCGGAGACTTTTTCCATGGAAAGAGGACCAAGGTACAGAGCCTACGCAGAGCTTAGAGAATCCAAGCTCCGATTGAGAAACGCCATGTACCGTGACGGCGAACAGCCCGAGAAATCCACGCCACCGGCGAAGAAGCAAGTGAGATTCGTGGGTTCAGAGACCGTTCGGAAAAGGTCGGCAACAGTAGCGCAATCGGTGCCGGATTTCTCTGCTGTATTGCGGAAGGAGAACAGAAGACCTCCGCCGGGGCTGTCGCCGGTGATGGAGATGACCCCGCCAGGGAAGACGTGGGGGAAGAATAACATTGGAGGGATATCGGCGAATTCGAGGGGGAGTAAGTCAGCGAGTGCAGGGGAGAAAAGGGGCGGAGGGTTGGCGGCGGCAAGGAAGAGCTACGCTGGATTTGAGGAGCTGAAGGGGTTTTCTACTGCGGCGGCAAACGCCATTAACGGTGAAAACAAGAGAGGAGGAGGTGGAAGGAGAGGGAAGACTGTATTGGGTGTTAGACAGATTTGA

Protein sequence

MADNFDHQSQTHLSFHSIDPRSLLLHQNSATHHYFPLQLTAETFSMERGPRYRAYAELRESKLRLRNAMYRDGEQPEKSTPPAKKQVRFVGSETVRKRSATVAQSVPDFSAVLRKENRRPPPGLSPVMEMTPPGKTWGKNNIGGISANSRGSKSASAGEKRGGGLAAARKSYAGFEELKGFSTAAANAINGENKRGGGGRRGKTVLGVRQI

Homology

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BLAST of CmoCh01G004290 vs. ExPASy TrEMBL
Match: A0A6J1GA97 (uncharacterized protein LOC111452204 OS=Cucurbita moschata OX=3662 GN=LOC111452204 PE=4 SV=1)

HSP 1 Score: 405.2 bits (1040), Expect = 1.7e-109
Identity = 211/211 (100.00%), Postives = 211/211 (100.00%), Query Frame = 0


Query: 1   MADNFDHQSQTHLSFHSIDPRSLLLHQNSATHHYFPLQLTAETFSMERGPRYRAYAELRE 60
           MADNFDHQSQTHLSFHSIDPRSLLLHQNSATHHYFPLQLTAETFSMERGPRYRAYAELRE
Sbjct: 1   MADNFDHQSQTHLSFHSIDPRSLLLHQNSATHHYFPLQLTAETFSMERGPRYRAYAELRE 60

Query: 61  SKLRLRNAMYRDGEQPEKSTPPAKKQVRFVGSETVRKRSATVAQSVPDFSAVLRKENRRP 120
           SKLRLRNAMYRDGEQPEKSTPPAKKQVRFVGSETVRKRSATVAQSVPDFSAVLRKENRRP
Sbjct: 61  SKLRLRNAMYRDGEQPEKSTPPAKKQVRFVGSETVRKRSATVAQSVPDFSAVLRKENRRP 120

Query: 121 PPGLSPVMEMTPPGKTWGKNNIGGISANSRGSKSASAGEKRGGGLAAARKSYAGFEELKG 180
           PPGLSPVMEMTPPGKTWGKNNIGGISANSRGSKSASAGEKRGGGLAAARKSYAGFEELKG
Sbjct: 121 PPGLSPVMEMTPPGKTWGKNNIGGISANSRGSKSASAGEKRGGGLAAARKSYAGFEELKG 180

Query: 181 FSTAAANAINGENKRGGGGRRGKTVLGVRQI 212
           FSTAAANAINGENKRGGGGRRGKTVLGVRQI
Sbjct: 181 FSTAAANAINGENKRGGGGRRGKTVLGVRQI 211

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BLAST of CmoCh01G004290 vs. ExPASy TrEMBL
Match: A0A6J1KFU5 (uncharacterized protein LOC111492844 OS=Cucurbita maxima OX=3661 GN=LOC111492844 PE=4 SV=1)

HSP 1 Score: 389.4 bits (999), Expect = 9.4e-105
Identity = 204/211 (96.68%), Postives = 208/211 (98.58%), Query Frame = 0


Query: 1   MADNFDHQSQTHLSFHSIDPRSLLLHQNSATHHYFPLQLTAETFSMERGPRYRAYAELRE 60
           MADNFDH +QTHL FHSIDPRSLLLHQNSATHHYFPLQLTAETFSMERGPRYRAYAELRE
Sbjct: 1   MADNFDHLTQTHLPFHSIDPRSLLLHQNSATHHYFPLQLTAETFSMERGPRYRAYAELRE 60

Query: 61  SKLRLRNAMYRDGEQPEKSTPPAKKQVRFVGSETVRKRSATVAQSVPDFSAVLRKENRRP 120
           SKLRLRN+MYRDGEQPEKSTPPAKKQVRFVGSETVRKRSATVAQSVPDFS+VLRKEN+RP
Sbjct: 61  SKLRLRNSMYRDGEQPEKSTPPAKKQVRFVGSETVRKRSATVAQSVPDFSSVLRKENKRP 120

Query: 121 PPGLSPVMEMTPPGKTWGKNNIGGISANSRGSKSASAGEKRGGGLAAARKSYAGFEELKG 180
           PPGLSPVMEMTPPGKTWGKNNIGGISANSRGSKSASAGEKRGGGLAAARKSYAGFEELKG
Sbjct: 121 PPGLSPVMEMTPPGKTWGKNNIGGISANSRGSKSASAGEKRGGGLAAARKSYAGFEELKG 180

Query: 181 FSTAAANAINGENKRGGGGRRGKTVLGVRQI 212
           FSTAAANAINGENKR GGGRRGKTVLGVRQI
Sbjct: 181 FSTAAANAINGENKR-GGGRRGKTVLGVRQI 210

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BLAST of CmoCh01G004290 vs. ExPASy TrEMBL
Match: A0A0A0L9P8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G258110 PE=4 SV=1)

HSP 1 Score: 314.3 bits (804), Expect = 3.8e-82
Identity = 173/201 (86.07%), Postives = 179/201 (89.05%), Query Frame = 0


Query: 12  HLSFHSIDPRSLLLHQNSATHHYFPLQLTAETFSMERGPRYRAYAELRESKLRLRNAMYR 71
           HL FHSID RSLLLHQNSA  H   L LT E FSMERGPRYRAYAELRESKLRLRNAMYR
Sbjct: 7   HLPFHSIDSRSLLLHQNSAADHPISLHLTPEPFSMERGPRYRAYAELRESKLRLRNAMYR 66

Query: 72  DGEQPEKSTPPAKKQVRFVGSETVRKRSATVAQSVPDFSAVLRKENRRPPPG-LSPVMEM 131
             E PEKSTPP KKQV+F+GSETVRKRSATVAQSVPDFSAVLRKENR+PPPG LSPVMEM
Sbjct: 67  HDEHPEKSTPPPKKQVKFLGSETVRKRSATVAQSVPDFSAVLRKENRKPPPGMLSPVMEM 126

Query: 132 TPPGKTWGKNNIGGISANSRGSKSASAGEKRGGGLAAARKSYAGFEELKGFSTAAANAIN 191
           TPPGKTWGK NIGG+S  SRGSKSASAGEKRGGGL A RKSYAGFEELKGFSTAAANAIN
Sbjct: 127 TPPGKTWGK-NIGGLSTTSRGSKSASAGEKRGGGLTAVRKSYAGFEELKGFSTAAANAIN 186

Query: 192 GENKRGGGGRRGKTVLGVRQI 212
           GEN++  GGRRGKTVLGVRQI
Sbjct: 187 GENRK--GGRRGKTVLGVRQI 204

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BLAST of CmoCh01G004290 vs. ExPASy TrEMBL
Match: A0A5A7U2K6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold600G001060 PE=4 SV=1)

HSP 1 Score: 302.0 bits (772), Expect = 2.0e-78
Identity = 169/213 (79.34%), Postives = 180/213 (84.51%), Query Frame = 0


Query: 1   MADNFDHQSQTHLSFHSIDPRSLLLHQNS-ATHHYFPLQLTAETFSMERGPRYRAYAELR 60
           MAD F      HL FHSID RSLLLHQNS AT H   L LT E FSMERGPRY+AYAELR
Sbjct: 1   MADKFH-----HLPFHSIDSRSLLLHQNSAATDHPISLHLTPEPFSMERGPRYKAYAELR 60

Query: 61  ESKLRLRNAMYRDGEQPEKSTPPAKKQVRFVGSETVRKRSATVAQSVPDFSAVLRKENRR 120
           ESKLR RNAMYR  E PEKSTPP KKQ++F+GSETVRKRSATVAQSVPDFSAVLRKENR+
Sbjct: 61  ESKLRFRNAMYRHDEHPEKSTPPPKKQIKFLGSETVRKRSATVAQSVPDFSAVLRKENRK 120

Query: 121 PPPG-LSPVMEMTPPGKTWGKNNIGGISANSRGSKSASAGEKRGGGLAAARKSYAGFEEL 180
           PPPG LSPVMEMTPPGKTWGK N+GG+S NSRGSKSASAGEKRGGGL   RKSYAGFEEL
Sbjct: 121 PPPGMLSPVMEMTPPGKTWGK-NMGGLSTNSRGSKSASAGEKRGGGLTTVRKSYAGFEEL 180

Query: 181 KGFSTAAANAINGENKRGGGGRRGKTVLGVRQI 212
           KGFSTA A AINGEN++  GGR+GKTVLG RQ+
Sbjct: 181 KGFSTATAKAINGENRK--GGRKGKTVLGSRQV 205

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BLAST of CmoCh01G004290 vs. ExPASy TrEMBL
Match: A0A6J1D4H7 (uncharacterized protein LOC111016939 OS=Momordica charantia OX=3673 GN=LOC111016939 PE=4 SV=1)

HSP 1 Score: 293.9 bits (751), Expect = 5.4e-76
Identity = 167/215 (77.67%), Postives = 178/215 (82.79%), Query Frame = 0


Query: 1   MADNFDHQSQTHLSFHSIDPRSLLLHQNSATHHYFPLQLTAETFSMERGPRYRAYAELRE 60
           MAD  D     HL FH+IDPRSLLLHQNS       L+LTA +FSMERGPRYRAYAELRE
Sbjct: 1   MADQID-----HLPFHAIDPRSLLLHQNSGADQPISLRLTAGSFSMERGPRYRAYAELRE 60

Query: 61  SKLRLRNAMYRDGEQPEKSTPPAKKQVRFVGSETVRKRSATVAQSVPDFSAVLRKENRRP 120
           SKLR RNA Y DGE PEK TPPAKKQV+F+GSETVRKRSA VAQSVPDFSA LRKENR+P
Sbjct: 61  SKLRRRNARYCDGEAPEKPTPPAKKQVKFLGSETVRKRSAAVAQSVPDFSAALRKENRKP 120

Query: 121 P-PGLSPVMEMTPPGKTWGKNNIGGISANSRGSKSASAGEKR---GGGLAAARKSYAGFE 180
           P   L PVMEMTPPGKTWGKNN+G   +NSRGSKSASAGEKR   GGGL AARKSYAGFE
Sbjct: 121 PAAALPPVMEMTPPGKTWGKNNVGQGLSNSRGSKSASAGEKRGGAGGGLTAARKSYAGFE 180

Query: 181 ELKGFSTAAANAINGENKRGGGGRRGKTVLGVRQI 212
           ELKGFSTAAANAINGE +R  GGR+GKTVLG+RQI
Sbjct: 181 ELKGFSTAAANAINGEIRR--GGRKGKTVLGIRQI 208

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BLAST of CmoCh01G004290 vs. NCBI nr
Match: XP_022948564.1 (uncharacterized protein LOC111452204 [Cucurbita moschata])

HSP 1 Score: 405.2 bits (1040), Expect = 3.4e-109
Identity = 211/211 (100.00%), Postives = 211/211 (100.00%), Query Frame = 0


Query: 1   MADNFDHQSQTHLSFHSIDPRSLLLHQNSATHHYFPLQLTAETFSMERGPRYRAYAELRE 60
           MADNFDHQSQTHLSFHSIDPRSLLLHQNSATHHYFPLQLTAETFSMERGPRYRAYAELRE
Sbjct: 1   MADNFDHQSQTHLSFHSIDPRSLLLHQNSATHHYFPLQLTAETFSMERGPRYRAYAELRE 60

Query: 61  SKLRLRNAMYRDGEQPEKSTPPAKKQVRFVGSETVRKRSATVAQSVPDFSAVLRKENRRP 120
           SKLRLRNAMYRDGEQPEKSTPPAKKQVRFVGSETVRKRSATVAQSVPDFSAVLRKENRRP
Sbjct: 61  SKLRLRNAMYRDGEQPEKSTPPAKKQVRFVGSETVRKRSATVAQSVPDFSAVLRKENRRP 120

Query: 121 PPGLSPVMEMTPPGKTWGKNNIGGISANSRGSKSASAGEKRGGGLAAARKSYAGFEELKG 180
           PPGLSPVMEMTPPGKTWGKNNIGGISANSRGSKSASAGEKRGGGLAAARKSYAGFEELKG
Sbjct: 121 PPGLSPVMEMTPPGKTWGKNNIGGISANSRGSKSASAGEKRGGGLAAARKSYAGFEELKG 180

Query: 181 FSTAAANAINGENKRGGGGRRGKTVLGVRQI 212
           FSTAAANAINGENKRGGGGRRGKTVLGVRQI
Sbjct: 181 FSTAAANAINGENKRGGGGRRGKTVLGVRQI 211

[Close]

BLAST of CmoCh01G004290 vs. NCBI nr
Match: KAG7036757.1 (hypothetical protein SDJN02_00377, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 404.1 bits (1037), Expect = 7.6e-109
Identity = 210/211 (99.53%), Postives = 211/211 (100.00%), Query Frame = 0


Query: 1   MADNFDHQSQTHLSFHSIDPRSLLLHQNSATHHYFPLQLTAETFSMERGPRYRAYAELRE 60
           MADNFDHQ+QTHLSFHSIDPRSLLLHQNSATHHYFPLQLTAETFSMERGPRYRAYAELRE
Sbjct: 1   MADNFDHQTQTHLSFHSIDPRSLLLHQNSATHHYFPLQLTAETFSMERGPRYRAYAELRE 60

Query: 61  SKLRLRNAMYRDGEQPEKSTPPAKKQVRFVGSETVRKRSATVAQSVPDFSAVLRKENRRP 120
           SKLRLRNAMYRDGEQPEKSTPPAKKQVRFVGSETVRKRSATVAQSVPDFSAVLRKENRRP
Sbjct: 61  SKLRLRNAMYRDGEQPEKSTPPAKKQVRFVGSETVRKRSATVAQSVPDFSAVLRKENRRP 120

Query: 121 PPGLSPVMEMTPPGKTWGKNNIGGISANSRGSKSASAGEKRGGGLAAARKSYAGFEELKG 180
           PPGLSPVMEMTPPGKTWGKNNIGGISANSRGSKSASAGEKRGGGLAAARKSYAGFEELKG
Sbjct: 121 PPGLSPVMEMTPPGKTWGKNNIGGISANSRGSKSASAGEKRGGGLAAARKSYAGFEELKG 180

Query: 181 FSTAAANAINGENKRGGGGRRGKTVLGVRQI 212
           FSTAAANAINGENKRGGGGRRGKTVLGVRQI
Sbjct: 181 FSTAAANAINGENKRGGGGRRGKTVLGVRQI 211

[Close]

BLAST of CmoCh01G004290 vs. NCBI nr
Match: KAG6607056.1 (hypothetical protein SDJN03_00398, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 402.5 bits (1033), Expect = 2.2e-108
Identity = 209/211 (99.05%), Postives = 210/211 (99.53%), Query Frame = 0


Query: 1   MADNFDHQSQTHLSFHSIDPRSLLLHQNSATHHYFPLQLTAETFSMERGPRYRAYAELRE 60
           MADNFDHQ+QTHLSFHSIDPRSLLLHQNSATHHYFPLQLTAETFSMERGPRYRAYAELRE
Sbjct: 1   MADNFDHQTQTHLSFHSIDPRSLLLHQNSATHHYFPLQLTAETFSMERGPRYRAYAELRE 60

Query: 61  SKLRLRNAMYRDGEQPEKSTPPAKKQVRFVGSETVRKRSATVAQSVPDFSAVLRKENRRP 120
           SKLRLRN MYRDGEQPEKSTPPAKKQVRFVGSETVRKRSATVAQSVPDFSAVLRKENRRP
Sbjct: 61  SKLRLRNVMYRDGEQPEKSTPPAKKQVRFVGSETVRKRSATVAQSVPDFSAVLRKENRRP 120

Query: 121 PPGLSPVMEMTPPGKTWGKNNIGGISANSRGSKSASAGEKRGGGLAAARKSYAGFEELKG 180
           PPGLSPVMEMTPPGKTWGKNNIGGISANSRGSKSASAGEKRGGGLAAARKSYAGFEELKG
Sbjct: 121 PPGLSPVMEMTPPGKTWGKNNIGGISANSRGSKSASAGEKRGGGLAAARKSYAGFEELKG 180

Query: 181 FSTAAANAINGENKRGGGGRRGKTVLGVRQI 212
           FSTAAANAINGENKRGGGGRRGKTVLGVRQI
Sbjct: 181 FSTAAANAINGENKRGGGGRRGKTVLGVRQI 211

[Close]

BLAST of CmoCh01G004290 vs. NCBI nr
Match: XP_023524771.1 (uncharacterized protein LOC111788608 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 394.8 bits (1013), Expect = 4.6e-106
Identity = 208/212 (98.11%), Postives = 209/212 (98.58%), Query Frame = 0


Query: 1   MADNFDHQSQTHLSFHSIDPRSLLLHQNSATHHYFPLQLTAETFSMERGPRYRAYAELRE 60
           MADNFDH +QTHL FHSIDPRSLLLHQNSATHHYFPLQLTAETFSMERGPRYRAYAELRE
Sbjct: 1   MADNFDHLTQTHLPFHSIDPRSLLLHQNSATHHYFPLQLTAETFSMERGPRYRAYAELRE 60

Query: 61  SKLRLRNAMYRDGEQPEKSTPPAKKQVRFVGSETVRKRSATVAQSVPDFSAVLRKENRRP 120
           SKLRLRNAMYRDGEQPEKSTPPAKKQVRFVGSETVRKRSATVAQSVPDFSAVLRKENRRP
Sbjct: 61  SKLRLRNAMYRDGEQPEKSTPPAKKQVRFVGSETVRKRSATVAQSVPDFSAVLRKENRRP 120

Query: 121 PPGLSPVMEMTPPGKTWGK-NNIGGISANSRGSKSASAGEKRGGGLAAARKSYAGFEELK 180
           PPGLSPVMEMTPPGKTWGK NNIGGISANSRGSKSASAGEKRGGGLAAARKSYAGFEELK
Sbjct: 121 PPGLSPVMEMTPPGKTWGKNNNIGGISANSRGSKSASAGEKRGGGLAAARKSYAGFEELK 180

Query: 181 GFSTAAANAINGENKRGGGGRRGKTVLGVRQI 212
           GFSTAAANAINGENKRGGGGRRGKTVLGVRQI
Sbjct: 181 GFSTAAANAINGENKRGGGGRRGKTVLGVRQI 212

[Close]

BLAST of CmoCh01G004290 vs. NCBI nr
Match: XP_022998093.1 (uncharacterized protein LOC111492844 [Cucurbita maxima])

HSP 1 Score: 389.4 bits (999), Expect = 1.9e-104
Identity = 204/211 (96.68%), Postives = 208/211 (98.58%), Query Frame = 0


Query: 1   MADNFDHQSQTHLSFHSIDPRSLLLHQNSATHHYFPLQLTAETFSMERGPRYRAYAELRE 60
           MADNFDH +QTHL FHSIDPRSLLLHQNSATHHYFPLQLTAETFSMERGPRYRAYAELRE
Sbjct: 1   MADNFDHLTQTHLPFHSIDPRSLLLHQNSATHHYFPLQLTAETFSMERGPRYRAYAELRE 60

Query: 61  SKLRLRNAMYRDGEQPEKSTPPAKKQVRFVGSETVRKRSATVAQSVPDFSAVLRKENRRP 120
           SKLRLRN+MYRDGEQPEKSTPPAKKQVRFVGSETVRKRSATVAQSVPDFS+VLRKEN+RP
Sbjct: 61  SKLRLRNSMYRDGEQPEKSTPPAKKQVRFVGSETVRKRSATVAQSVPDFSSVLRKENKRP 120

Query: 121 PPGLSPVMEMTPPGKTWGKNNIGGISANSRGSKSASAGEKRGGGLAAARKSYAGFEELKG 180
           PPGLSPVMEMTPPGKTWGKNNIGGISANSRGSKSASAGEKRGGGLAAARKSYAGFEELKG
Sbjct: 121 PPGLSPVMEMTPPGKTWGKNNIGGISANSRGSKSASAGEKRGGGLAAARKSYAGFEELKG 180

Query: 181 FSTAAANAINGENKRGGGGRRGKTVLGVRQI 212
           FSTAAANAINGENKR GGGRRGKTVLGVRQI
Sbjct: 181 FSTAAANAINGENKR-GGGRRGKTVLGVRQI 210

[Close]

BLAST of CmoCh01G004290 vs. TAIR 10
Match: AT5G38300.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G67035.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 126.7 bits (317), Expect = 2.2e-29
Identity = 113/271 (41.70%), Postives = 143/271 (52.77%), Query Frame = 0


Query: 1   MADNFDHQSQTHLSFHSIDPRSLLLHQNSATHHYFPLQLTAETFS-MERGPRYRAYAELR 60
           MAD   + +   L F S+DP SL+L QNS TH    L+L  + FS  ERGPRY  Y+ LR
Sbjct: 1   MADIISNPTMEQL-FFSVDPMSLILSQNSDTHQ---LKLLLDGFSGFERGPRYDEYSRLR 60

Query: 61  ESKLRLRNAMYRD-GEQPEKSTPPAKKQVRFVGS-------------------------- 120
           ESKLR++    +   E+ E   P  KKQVRF G+                          
Sbjct: 61  ESKLRMKRDFQKFLEEEDEVEEPRIKKQVRFEGNSVNSQEGDKFSPEKKKQSRFEGISVI 120

Query: 121 --------ETVRKRS------------ATVAQSVPDFSAVLRKENRRPPPGLSPVMEMTP 180
                   E V+K+S            +++AQSVPDFSAV+RKENRRP      +  +TP
Sbjct: 121 SQEDRFSPEKVKKQSRFGFSPLKKAVPSSLAQSVPDFSAVIRKENRRP----VNINTITP 180

Query: 181 PGKTWGKNNIGGI--SANSRGSKSASAGEKRGGG---LAAARKSYAGFEELKGFSTAAAN 212
           P  T  K+  GG+   + SRGSKSASAGEK+  G   +  ARKSYA  E+LK  S AAA+
Sbjct: 181 PPPT-SKSRNGGVLTGSASRGSKSASAGEKKSKGMMMMGMARKSYANVEDLKKISMAAAS 240

[Close]

BLAST of CmoCh01G004290 vs. TAIR 10
Match: AT1G67035.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G38300.1). )

HSP 1 Score: 98.2 bits (243), Expect = 8.3e-21
Identity = 94/222 (42.34%), Postives = 120/222 (54.05%), Query Frame = 0


Query: 22  SLLLHQN--SATHHYFPLQLTAETFSMERGPRYRAYAELRESKLR--------LRNAMYR 81
           SLL   N  S T     L +    +  ERG RY  YA LRESKLR        L+    R
Sbjct: 12  SLLFPVNPMSDTQQKLKLLVDNGDYGFERGSRYGEYARLRESKLRMKRDFEKILKEEQVR 71

Query: 82  DG-EQPEKSTPPAKKQVRFVGSETVRK----RSATVAQSVPDFSAVLRKENRRPPPG--- 141
            G  + E+     +K+ RF  +   RK     S+++AQSVPDFS+++RKENRRPP     
Sbjct: 72  FGFTREEEIRVLPEKKTRFGFNPNQRKTSSSSSSSLAQSVPDFSSMIRKENRRPPVNSNL 131

Query: 142 LSPVMEMTPPGKTWGKNNIGGISANS--RGSKSASAGEKRGGGLAAARKSYAGFEELKGF 201
           L    E+TPP     K+    + A S  RGS SASAGEK+G G+   RKSYA  ++LK  
Sbjct: 132 LPRRTELTPPSM---KSRNAAVFAGSVIRGSVSASAGEKKGIGM--MRKSYAAVDDLKKI 191

Query: 202 STAAANAINGENKR-----GGGGRR-------GKTVLGVRQI 212
           S AAA+AING   +     GGGGR+       G+T+LG RQI
Sbjct: 192 SMAAASAINGGGGKRRSIGGGGGRKSLGGGGGGRTILGYRQI 228

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BLAST of CmoCh01G004290 vs. TAIR 10
Match: AT1G67035.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: cotyledon; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G38300.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 73.2 bits (178), Expect = 2.9e-13
Identity = 82/210 (39.05%), Postives = 101/210 (48.10%), Query Frame = 0


Query: 22  SLLLHQN--SATHHYFPLQLTAETFSMERGPRYRAYAELRESKLR--------LRNAMYR 81
           SLL   N  S T     L +    +  ERG RY  YA LRESKLR        L+    R
Sbjct: 12  SLLFPVNPMSDTQQKLKLLVDNGDYGFERGSRYGEYARLRESKLRMKRDFEKILKEEQVR 71

Query: 82  DG-EQPEKSTPPAKKQVRFVGSETVRK----RSATVAQSVPDFSAVLRKENRRPPPG--- 141
            G  + E+     +K+ RF  +   RK     S+++AQSVPDFS+++RKENRRPP     
Sbjct: 72  FGFTREEEIRVLPEKKTRFGFNPNQRKTSSSSSSSLAQSVPDFSSMIRKENRRPPVNSNL 131

Query: 142 LSPVMEMTPPGKTWGKNNIGGISANS--RGSKSASAGEKRGGGLAAARKSYAGFEELKGF 201
           L    E+TPP     K+    + A S  RGS SASAGEK+GG     RKS  G       
Sbjct: 132 LPRRTELTPPSM---KSRNAAVFAGSVIRGSVSASAGEKKGG-----RKSLGG------- 189

Query: 202 STAAANAINGENKRGGGGRRGKTVLGVRQI 212
                         GGGGR   T+LG RQI
Sbjct: 192 --------------GGGGR---TILGYRQI 189

The following BLAST results are available for this feature:

BLAST of CmoCh01G004290 vs.


Match Name	E-value	Identity	Description

BLAST of CmoCh01G004290 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GA97	1.7e-109	100.00	uncharacterized protein LOC111452204 OS=Cucurbita moschata OX=3662 GN=LOC1114522...	[more]
A0A6J1KFU5	9.4e-105	96.68	uncharacterized protein LOC111492844 OS=Cucurbita maxima OX=3661 GN=LOC111492844...	[more]
A0A0A0L9P8	3.8e-82	86.07	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G258110 PE=4 SV=1	[more]
A0A5A7U2K6	2.0e-78	79.34	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A6J1D4H7	5.4e-76	77.67	uncharacterized protein LOC111016939 OS=Momordica charantia OX=3673 GN=LOC111016...	[more]

BLAST of CmoCh01G004290 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022948564.1	3.4e-109	100.00	uncharacterized protein LOC111452204 [Cucurbita moschata]	[more]
KAG7036757.1	7.6e-109	99.53	hypothetical protein SDJN02_00377, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6607056.1	2.2e-108	99.05	hypothetical protein SDJN03_00398, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023524771.1	4.6e-106	98.11	uncharacterized protein LOC111788608 [Cucurbita pepo subsp. pepo]	[more]
XP_022998093.1	1.9e-104	96.68	uncharacterized protein LOC111492844 [Cucurbita maxima]	[more]

BLAST of CmoCh01G004290 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G38300.1	2.2e-29	41.70	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G67035.2	8.3e-21	42.34	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G67035.1	2.9e-13	39.05	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 188..211
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 141..155
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 115..162
None	No IPR available	PANTHER	PTHR37708:SF2	SUBFAMILY NOT NAMED	coord: 9..211
None	No IPR available	PANTHER	PTHR37708	FAMILY NOT NAMED	coord: 9..211

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh01G004290.1	CmoCh01G004290.1	mRNA