CmoCh01G004220 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh01G004220
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	TPX2 domain-containing protein
Location	Cmo_Chr01: 2075750 .. 2077177 (+)
RNA-Seq Expression	CmoCh01G004220
Synteny	CmoCh01G004220

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACTCGCACATATTGCTTACCAACCAACCTCCCATCTTCCCCACAGTTTCACTATAAATTTTGCACTTCATTGCTTCCATTTTAGCTCCATCACCCTTTGACCCTCTTCTTCATATCATTCACTCATGGACAAATCTCCACCAAAATCTTTCATCAAGGTTTCCACTCTTGCTTCATTCTTCTTGTTTCTTTGTTCTTTGCTTTGAACTTTCTTTTCTTCTTGTTCTTAGGCTAAAGATGGCGTTAGAGACCGAGTTTCAGAGAAGACGGAGAGAGTTCGGGTAAGTTTTTCGAGATGGATGTTGAATCTTCTTTGTGGAATGGAAGGAAGTGGTGAGGTTTGATTTGTTTGCTTGTTCTTTTAGACTCCTCAAAAGGTTGTTGTGAAAGAGAACACTAAGAAGCCTCAAGATTTCAAGTTGCATACGCAAGAAAGAGCAGTAAAACGGGCGATGTTTAATTACTCGGTGAGTTGAGAATATAAGCAAATATACTTTAACTTATAAACAGAGCGATGATTTAACATCATATAAGAATAGGAGAATTTCGTGTTCAACTGATACTCACATGTCGAGTCTCGTCTCGTCTCGTGCTAATCTCGTAATCGTAGATAGCAACAAAGTTATACGTGACAGAGCTACAAAAGAAAGTGGAAGAAAAGTTGCACAAGGTAAACATCAACTTACCAATCTTTTCTACAACACAAAAGTTTGGAATAAAATAGTGAAACAACAAAATGTGTGGAACAGATGATAGAAGAGGAAGAGGTTCGGTTGATGAGAAAGGAGATGATTCCAAGAGCTCAGCTCATGCCCTACTTTGATAGACCCTACTTTCCTCAAAGGTAGAGCACAAAAAGTTGATATAAAAAAAAAACTTTAACGGGTACTTCTCTTTCAAGATTTATAACGTTCGTACTTACAAATACGTAAAAAGTACTTATAGAGTGCTTTGAATGAAGTTCGTAAAGCTAAAATACATTAACTTTAAAAGTTGACCTTAAAAAGAACACCTACGTTCCACTCTCAAACGATGTCGTGGTTGTATCACATGCAGATCAAATCGACCTTTGACGATCCCGAGAGAGCCGAGTTTCTTGATAAACAAGGAGCAATGGAGCTGCAACGGTGACAGTGAAGTTTACAGCTTTCAGAGACAAACTTTGAAACCAATCAAATAAACTATATCATTTGTAAAACCATGTGTTTATGATTGTGTTTGTATAATTTAGTCATAGACAAAGGGGAGAGTGATGTTTTTGATGTAGAGAGAAGCATTTTCGCTTCATGACTTGTTCTTTCAAATTCGTCCAAATAAAATGAAACTATCAATCTTTAAAACGATAATCCGTGTCTTATTCAATGAACTACGTTCGAGTTGGCTATACTCTGCTTATGACAAAAATACAAGTAACGAATGTCAAACGTGG

mRNA sequence

ACTCGCACATATTGCTTACCAACCAACCTCCCATCTTCCCCACAGTTTCACTATAAATTTTGCACTTCATTGCTTCCATTTTAGCTCCATCACCCTTTGACCCTCTTCTTCATATCATTCACTCATGGACAAATCTCCACCAAAATCTTTCATCAAGGCTAAAGATGGCGTTAGAGACCGAGTTTCAGAGAAGACGGAGAGAGTTCGGACTCCTCAAAAGGTTGTTGTGAAAGAGAACACTAAGAAGCCTCAAGATTTCAAGTTGCATACGCAAGAAAGAGCAGTAAAACGGGCGATGTTTAATTACTCGATAGCAACAAAGTTATACGTGACAGAGCTACAAAAGAAAGTGGAAGAAAAGTTGCACAAGATGATAGAAGAGGAAGAGGTTCGGTTGATGAGAAAGGAGATGATTCCAAGAGCTCAGCTCATGCCCTACTTTGATAGACCCTACTTTCCTCAAAGATCAAATCGACCTTTGACGATCCCGAGAGAGCCGAGTTTCTTGATAAACAAGGAGCAATGGAGCTGCAACGGTGACAGTGAAGTTTACAGCTTTCAGAGACAAACTTTGAAACCAATCAAATAAACTATATCATTTGTAAAACCATGTGTTTATGATTGTGTTTGTATAATTTAGTCATAGACAAAGGGGAGAGTGATGTTTTTGATGTAGAGAGAAGCATTTTCGCTTCATGACTTGTTCTTTCAAATTCGTCCAAATAAAATGAAACTATCAATCTTTAAAACGATAATCCGTGTCTTATTCAATGAACTACGTTCGAGTTGGCTATACTCTGCTTATGACAAAAATACAAGTAACGAATGTCAAACGTGG

Coding sequence (CDS)

ATGGACAAATCTCCACCAAAATCTTTCATCAAGGCTAAAGATGGCGTTAGAGACCGAGTTTCAGAGAAGACGGAGAGAGTTCGGACTCCTCAAAAGGTTGTTGTGAAAGAGAACACTAAGAAGCCTCAAGATTTCAAGTTGCATACGCAAGAAAGAGCAGTAAAACGGGCGATGTTTAATTACTCGATAGCAACAAAGTTATACGTGACAGAGCTACAAAAGAAAGTGGAAGAAAAGTTGCACAAGATGATAGAAGAGGAAGAGGTTCGGTTGATGAGAAAGGAGATGATTCCAAGAGCTCAGCTCATGCCCTACTTTGATAGACCCTACTTTCCTCAAAGATCAAATCGACCTTTGACGATCCCGAGAGAGCCGAGTTTCTTGATAAACAAGGAGCAATGGAGCTGCAACGGTGACAGTGAAGTTTACAGCTTTCAGAGACAAACTTTGAAACCAATCAAATAA

Protein sequence

MDKSPPKSFIKAKDGVRDRVSEKTERVRTPQKVVVKENTKKPQDFKLHTQERAVKRAMFNYSIATKLYVTELQKKVEEKLHKMIEEEEVRLMRKEMIPRAQLMPYFDRPYFPQRSNRPLTIPREPSFLINKEQWSCNGDSEVYSFQRQTLKPIK

Homology

[Close]

BLAST of CmoCh01G004220 vs. ExPASy Swiss-Prot
Match: F4I2H7 (Protein TPX2 OS=Arabidopsis thaliana OX=3702 GN=TPX2 PE=1 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 5.8e-08
Identity = 41/126 (32.54%), Postives = 70/126 (55.56%), Query Frame = 0


Query: 7   KSFIKAKDGVRDRVSEKTERVRTPQKVVVKENTKKPQDFKLHTQERAVKRAMFNYSIATK 66
           K   KA+  +++      E+VR P   +        Q+F LH + RAV+RA F++ I  K
Sbjct: 617 KRLFKAQPVIKEDPIPVPEKVRMPLTEI--------QEFNLHVEHRAVERADFDHKIKEK 676

Query: 67  LYVTELQKKVEEKLHKMIEEEE-VRLMRKEMIPRAQLMPYFDRPYFPQRSNRPLTIPREP 126
               +  ++ E +  KM+EEE  ++ MRK M+P A+ +P F++P+ PQ+SN+  T  + P
Sbjct: 677 ENQYKRYRE-ESEAAKMVEEERALKQMRKTMVPHARPVPNFNKPFLPQKSNKGTTKAKSP 733

Query: 127 SFLINK 132
           +  + K
Sbjct: 737 NLRVIK 733

[Close]

BLAST of CmoCh01G004220 vs. ExPASy TrEMBL
Match: A0A6J1GBJ5 (protein TPX2-like OS=Cucurbita moschata OX=3662 GN=LOC111452663 PE=3 SV=1)

HSP 1 Score: 302.4 bits (773), Expect = 1.1e-78
Identity = 154/154 (100.00%), Postives = 154/154 (100.00%), Query Frame = 0


Query: 1   MDKSPPKSFIKAKDGVRDRVSEKTERVRTPQKVVVKENTKKPQDFKLHTQERAVKRAMFN 60
           MDKSPPKSFIKAKDGVRDRVSEKTERVRTPQKVVVKENTKKPQDFKLHTQERAVKRAMFN
Sbjct: 1   MDKSPPKSFIKAKDGVRDRVSEKTERVRTPQKVVVKENTKKPQDFKLHTQERAVKRAMFN 60

Query: 61  YSIATKLYVTELQKKVEEKLHKMIEEEEVRLMRKEMIPRAQLMPYFDRPYFPQRSNRPLT 120
           YSIATKLYVTELQKKVEEKLHKMIEEEEVRLMRKEMIPRAQLMPYFDRPYFPQRSNRPLT
Sbjct: 61  YSIATKLYVTELQKKVEEKLHKMIEEEEVRLMRKEMIPRAQLMPYFDRPYFPQRSNRPLT 120

Query: 121 IPREPSFLINKEQWSCNGDSEVYSFQRQTLKPIK 155
           IPREPSFLINKEQWSCNGDSEVYSFQRQTLKPIK
Sbjct: 121 IPREPSFLINKEQWSCNGDSEVYSFQRQTLKPIK 154

[Close]

BLAST of CmoCh01G004220 vs. ExPASy TrEMBL
Match: A0A6J1K9I8 (protein TPX2 OS=Cucurbita maxima OX=3661 GN=LOC111492897 PE=3 SV=1)

HSP 1 Score: 292.4 bits (747), Expect = 1.1e-75
Identity = 148/154 (96.10%), Postives = 151/154 (98.05%), Query Frame = 0


Query: 1   MDKSPPKSFIKAKDGVRDRVSEKTERVRTPQKVVVKENTKKPQDFKLHTQERAVKRAMFN 60
           MDKSPPKSFIKAKDG+RDRVS+KTERVRTPQKVVVKENTKKPQDFKLHTQERAVKRAMFN
Sbjct: 1   MDKSPPKSFIKAKDGIRDRVSDKTERVRTPQKVVVKENTKKPQDFKLHTQERAVKRAMFN 60

Query: 61  YSIATKLYVTELQKKVEEKLHKMIEEEEVRLMRKEMIPRAQLMPYFDRPYFPQRSNRPLT 120
           YSIATKLYV ELQKKVEEKLHKMIEEEEVRLMRKEMIPRAQLMPYFDRPYFPQRSNRPLT
Sbjct: 61  YSIATKLYVMELQKKVEEKLHKMIEEEEVRLMRKEMIPRAQLMPYFDRPYFPQRSNRPLT 120

Query: 121 IPREPSFLINKEQWSCNGDSEVYSFQRQTLKPIK 155
           IPREPSFL+NKEQWSCN DSEVYSFQRQ LKPIK
Sbjct: 121 IPREPSFLMNKEQWSCNTDSEVYSFQRQALKPIK 154

[Close]

BLAST of CmoCh01G004220 vs. ExPASy TrEMBL
Match: A0A0A0LCD4 (TPX2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G258180 PE=3 SV=1)

HSP 1 Score: 267.3 bits (682), Expect = 3.9e-68
Identity = 139/155 (89.68%), Postives = 142/155 (91.61%), Query Frame = 0


Query: 1   MDKSPPKSFI-KAKDGVRDRVSEKTERVRTPQKVVVKENTKKPQDFKLHTQERAVKRAMF 60
           MDKS PKS + K KDGVRDRV EK ER R PQK  VKENTKK QDFKLHTQERAVKRAMF
Sbjct: 1   MDKSQPKSLMTKTKDGVRDRVLEKAERARVPQKAHVKENTKKSQDFKLHTQERAVKRAMF 60

Query: 61  NYSIATKLYVTELQKKVEEKLHKMIEEEEVRLMRKEMIPRAQLMPYFDRPYFPQRSNRPL 120
           NYSIATKLYVTELQKKVEEKLHKMIEEEEVRLMRKEMIPRAQLMPYFDRPYFPQRSNRPL
Sbjct: 61  NYSIATKLYVTELQKKVEEKLHKMIEEEEVRLMRKEMIPRAQLMPYFDRPYFPQRSNRPL 120

Query: 121 TIPREPSFLINKEQWSCNGDSEVYSFQRQTLKPIK 155
           TIPREPSFL+NKEQWSCN DSE+YSFQRQ LKPIK
Sbjct: 121 TIPREPSFLMNKEQWSCNTDSELYSFQRQALKPIK 155

[Close]

BLAST of CmoCh01G004220 vs. ExPASy TrEMBL
Match: A0A6J1CNR5 (protein TPX2 OS=Momordica charantia OX=3673 GN=LOC111013295 PE=3 SV=1)

HSP 1 Score: 259.6 bits (662), Expect = 8.2e-66
Identity = 131/154 (85.06%), Postives = 141/154 (91.56%), Query Frame = 0


Query: 1   MDKSPPKSFIKAKDGVRDRVSEKTERVRTPQKVVVKENTKKPQDFKLHTQERAVKRAMFN 60
           MDK  P+S IK KDGVRDRVSE+ ER R  QKVVVKENTK  QDFKLHTQERAVKRAMFN
Sbjct: 1   MDKFQPRSLIKVKDGVRDRVSERAERARGSQKVVVKENTKM-QDFKLHTQERAVKRAMFN 60

Query: 61  YSIATKLYVTELQKKVEEKLHKMIEEEEVRLMRKEMIPRAQLMPYFDRPYFPQRSNRPLT 120
           YS+ATK YVTE+QKK+EEKLHKMIEEEE+RL+RKEM+PRAQLMPYFDRPYFPQRSNRPLT
Sbjct: 61  YSVATKSYVTEIQKKIEEKLHKMIEEEEIRLLRKEMVPRAQLMPYFDRPYFPQRSNRPLT 120

Query: 121 IPREPSFLINKEQWSCNGDSEVYSFQRQTLKPIK 155
           IPREPSFL+NKEQWSCN DSE+YSFQRQ LKPIK
Sbjct: 121 IPREPSFLVNKEQWSCNTDSELYSFQRQALKPIK 153

[Close]

BLAST of CmoCh01G004220 vs. ExPASy TrEMBL
Match: A0A5D3DX27 (Protein TPX2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold600G00390 PE=3 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 7.2e-46
Identity = 104/115 (90.43%), Postives = 105/115 (91.30%), Query Frame = 0


Query: 1   MDKSPPKSFI-KAKDGVRDRVSEKTERVRTPQKVVVKENTKKPQDFKLHTQERAVKRAMF 60
           MDKS PKS + K KDGVRDRV EK ER R PQK  VKENTKKPQDFKLHTQERAVKRAMF
Sbjct: 1   MDKSQPKSLMTKTKDGVRDRVLEKVERARVPQKAPVKENTKKPQDFKLHTQERAVKRAMF 60

Query: 61  NYSIATKLYVTELQKKVEEKLHKMIEEEEVRLMRKEMIPRAQLMPYFDRPYFPQR 115
           NYSIATKLYVTELQKKVEEKLHKMIEEEEVRLMRKEMIPRAQLMPYFDRPYFPQR
Sbjct: 61  NYSIATKLYVTELQKKVEEKLHKMIEEEEVRLMRKEMIPRAQLMPYFDRPYFPQR 115

[Close]

BLAST of CmoCh01G004220 vs. NCBI nr
Match: XP_022949252.1 (protein TPX2-like [Cucurbita moschata])

HSP 1 Score: 302.4 bits (773), Expect = 2.3e-78
Identity = 154/154 (100.00%), Postives = 154/154 (100.00%), Query Frame = 0


Query: 1   MDKSPPKSFIKAKDGVRDRVSEKTERVRTPQKVVVKENTKKPQDFKLHTQERAVKRAMFN 60
           MDKSPPKSFIKAKDGVRDRVSEKTERVRTPQKVVVKENTKKPQDFKLHTQERAVKRAMFN
Sbjct: 1   MDKSPPKSFIKAKDGVRDRVSEKTERVRTPQKVVVKENTKKPQDFKLHTQERAVKRAMFN 60

Query: 61  YSIATKLYVTELQKKVEEKLHKMIEEEEVRLMRKEMIPRAQLMPYFDRPYFPQRSNRPLT 120
           YSIATKLYVTELQKKVEEKLHKMIEEEEVRLMRKEMIPRAQLMPYFDRPYFPQRSNRPLT
Sbjct: 61  YSIATKLYVTELQKKVEEKLHKMIEEEEVRLMRKEMIPRAQLMPYFDRPYFPQRSNRPLT 120

Query: 121 IPREPSFLINKEQWSCNGDSEVYSFQRQTLKPIK 155
           IPREPSFLINKEQWSCNGDSEVYSFQRQTLKPIK
Sbjct: 121 IPREPSFLINKEQWSCNGDSEVYSFQRQTLKPIK 154

[Close]

BLAST of CmoCh01G004220 vs. NCBI nr
Match: KAG7036751.1 (Protein TPX2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 298.1 bits (762), Expect = 4.3e-77
Identity = 151/154 (98.05%), Postives = 153/154 (99.35%), Query Frame = 0


Query: 1   MDKSPPKSFIKAKDGVRDRVSEKTERVRTPQKVVVKENTKKPQDFKLHTQERAVKRAMFN 60
           MDKSPPKSFIKAKDGVRDRVSEKTERVRTPQKVVVK+NTKKPQDFKLHTQERAVKRAMFN
Sbjct: 1   MDKSPPKSFIKAKDGVRDRVSEKTERVRTPQKVVVKDNTKKPQDFKLHTQERAVKRAMFN 60

Query: 61  YSIATKLYVTELQKKVEEKLHKMIEEEEVRLMRKEMIPRAQLMPYFDRPYFPQRSNRPLT 120
           YSIATKLYVTELQKKVEEKLHKMIEEEEVRLMRKEMIPRAQLMPYFDRPYFPQRSNRPLT
Sbjct: 61  YSIATKLYVTELQKKVEEKLHKMIEEEEVRLMRKEMIPRAQLMPYFDRPYFPQRSNRPLT 120

Query: 121 IPREPSFLINKEQWSCNGDSEVYSFQRQTLKPIK 155
           IPREPSFL+NKEQWSCNGDSEVYSFQRQ LKPIK
Sbjct: 121 IPREPSFLMNKEQWSCNGDSEVYSFQRQALKPIK 154

[Close]

BLAST of CmoCh01G004220 vs. NCBI nr
Match: XP_023525926.1 (protein TPX2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 297.0 bits (759), Expect = 9.6e-77
Identity = 150/154 (97.40%), Postives = 153/154 (99.35%), Query Frame = 0


Query: 1   MDKSPPKSFIKAKDGVRDRVSEKTERVRTPQKVVVKENTKKPQDFKLHTQERAVKRAMFN 60
           MDKSPPKSFIKAKDGVRDRVS+KTERVRTPQKVVVK+NTKKPQDFKLHTQERAVKRAMFN
Sbjct: 1   MDKSPPKSFIKAKDGVRDRVSDKTERVRTPQKVVVKDNTKKPQDFKLHTQERAVKRAMFN 60

Query: 61  YSIATKLYVTELQKKVEEKLHKMIEEEEVRLMRKEMIPRAQLMPYFDRPYFPQRSNRPLT 120
           YSIATKLYVTELQKKVEEKLHKMIEEEEVRLMRKEMIPRAQLMPYFDRPYFPQRSNRPLT
Sbjct: 61  YSIATKLYVTELQKKVEEKLHKMIEEEEVRLMRKEMIPRAQLMPYFDRPYFPQRSNRPLT 120

Query: 121 IPREPSFLINKEQWSCNGDSEVYSFQRQTLKPIK 155
           IPREPSFL+NKEQWSCNGDSEVYSFQRQ LKPIK
Sbjct: 121 IPREPSFLMNKEQWSCNGDSEVYSFQRQALKPIK 154

[Close]

BLAST of CmoCh01G004220 vs. NCBI nr
Match: XP_022998171.1 (protein TPX2 [Cucurbita maxima])

HSP 1 Score: 292.4 bits (747), Expect = 2.4e-75
Identity = 148/154 (96.10%), Postives = 151/154 (98.05%), Query Frame = 0


Query: 1   MDKSPPKSFIKAKDGVRDRVSEKTERVRTPQKVVVKENTKKPQDFKLHTQERAVKRAMFN 60
           MDKSPPKSFIKAKDG+RDRVS+KTERVRTPQKVVVKENTKKPQDFKLHTQERAVKRAMFN
Sbjct: 1   MDKSPPKSFIKAKDGIRDRVSDKTERVRTPQKVVVKENTKKPQDFKLHTQERAVKRAMFN 60

Query: 61  YSIATKLYVTELQKKVEEKLHKMIEEEEVRLMRKEMIPRAQLMPYFDRPYFPQRSNRPLT 120
           YSIATKLYV ELQKKVEEKLHKMIEEEEVRLMRKEMIPRAQLMPYFDRPYFPQRSNRPLT
Sbjct: 61  YSIATKLYVMELQKKVEEKLHKMIEEEEVRLMRKEMIPRAQLMPYFDRPYFPQRSNRPLT 120

Query: 121 IPREPSFLINKEQWSCNGDSEVYSFQRQTLKPIK 155
           IPREPSFL+NKEQWSCN DSEVYSFQRQ LKPIK
Sbjct: 121 IPREPSFLMNKEQWSCNTDSEVYSFQRQALKPIK 154

[Close]

BLAST of CmoCh01G004220 vs. NCBI nr
Match: XP_038877019.1 (protein TPX2-like [Benincasa hispida])

HSP 1 Score: 270.4 bits (690), Expect = 9.6e-69
Identity = 142/156 (91.03%), Postives = 146/156 (93.59%), Query Frame = 0


Query: 1   MDKSPPKSFI-KAKDGVRDRVSEKTERVRTPQKVV-VKENTKKPQDFKLHTQERAVKRAM 60
           MDKS PKSF+ K KDGVRDRV EK ERVR PQKVV VKENTKKPQDFKLHTQERAVKRAM
Sbjct: 1   MDKSQPKSFMTKTKDGVRDRVLEKAERVRAPQKVVHVKENTKKPQDFKLHTQERAVKRAM 60

Query: 61  FNYSIATKLYVTELQKKVEEKLHKMIEEEEVRLMRKEMIPRAQLMPYFDRPYFPQRSNRP 120
           FNYSIATKLYV ELQKKVEEKLHKMIEEEEVRLMRKEMIPRAQLMPYFDRPYFPQRSNRP
Sbjct: 61  FNYSIATKLYVMELQKKVEEKLHKMIEEEEVRLMRKEMIPRAQLMPYFDRPYFPQRSNRP 120

Query: 121 LTIPREPSFLINKEQWSCNGDSEVYSFQRQTLKPIK 155
           LTIPREPSFL+NKEQW+CN DSE+YSFQRQ LKPIK
Sbjct: 121 LTIPREPSFLMNKEQWNCNTDSELYSFQRQALKPIK 156

[Close]

BLAST of CmoCh01G004220 vs. TAIR 10
Match: AT5G37478.1 (TPX2 (targeting protein for Xklp2) protein family )

HSP 1 Score: 146.4 bits (368), Expect = 1.9e-35
Identity = 76/133 (57.14%), Postives = 103/133 (77.44%), Query Frame = 0


Query: 16  VRDRVSEKTERVRTPQ--KVVVKENTKKPQDFKLHTQERAVKRAMFNYSIATKLYVTELQ 75
           +++R  +KT+   T    K   KEN KKP +FKLH+ ERAVKRAMFNYS+AT  Y+ +LQ
Sbjct: 40  LKERAHDKTKAATTKNITKAPAKEN-KKPLEFKLHSGERAVKRAMFNYSVATNYYIQKLQ 99

Query: 76  KKVEEKLHKMIEEEEVRLMRKEMIPRAQLMPYFDRPYFPQRSNRPLTIPREPSF-LINKE 135
           KK EE+L KMIEEEE+R++RKEM+P+AQLMP+FDRP+ PQRS+RPLT+P+EPSF  +N  
Sbjct: 100 KKQEERLQKMIEEEEIRMLRKEMVPKAQLMPFFDRPFLPQRSSRPLTMPKEPSFGNVNST 159

Query: 136 QWSCNGDSEVYSF 146
            W+C  +++ Y +
Sbjct: 160 CWTCVFNNQHYLY 171

[Close]

BLAST of CmoCh01G004220 vs. TAIR 10
Match: AT3G01015.1 (TPX2 (targeting protein for Xklp2) protein family )

HSP 1 Score: 94.4 bits (233), Expect = 8.8e-20
Identity = 45/88 (51.14%), Postives = 63/88 (71.59%), Query Frame = 0


Query: 42  PQDFKLHTQERAVKRAMFNYSIATKLYVTELQKKVEEKLHKMIEEEEVRLMRKEMIPRAQ 101
           P D KLH+  RAV+RA F+Y +  K+ + E  K   E+  K+ EEEE+R +RKE++P+AQ
Sbjct: 371 PVDLKLHSDIRAVERAEFDYQVTEKINLVEQYKTERERQQKLAEEEEIRRLRKELVPKAQ 430

Query: 102 LMPYFDRPYFPQRSNRPLTIPREPSFLI 130
            MPYFDRP+ P+RSN+  T+PR+P F I
Sbjct: 431 PMPYFDRPFIPKRSNKHPTVPRDPKFNI 458

[Close]

BLAST of CmoCh01G004220 vs. TAIR 10
Match: AT5G15510.1 (TPX2 (targeting protein for Xklp2) protein family )

HSP 1 Score: 90.5 bits (223), Expect = 1.3e-18
Identity = 47/102 (46.08%), Postives = 68/102 (66.67%), Query Frame = 0


Query: 41  KPQDFKLHTQERAVKRAMFNYSIATKLYVTELQKKVEEKLHKMIEEEEVRLMRKEMIPRA 100
           +P D  LH+  RAV+RA F+Y +A K+   E  K   E+  K+ EEEE+R +RKE++P+A
Sbjct: 380 RPVDLTLHSDVRAVERAEFDYQVAEKMSFIEQYKMERERQQKLAEEEEIRRLRKELVPKA 439

Query: 101 QLMPYFDRPYFPQRSNRPLTIPREPSFLI--NKEQWSCNGDS 141
           Q MPYFDRP+ P+RS++  T PR+P F I  +K+   C+  S
Sbjct: 440 QPMPYFDRPFIPRRSSKHPTAPRDPKFHIPQHKKIRCCSSSS 481

[Close]

BLAST of CmoCh01G004220 vs. TAIR 10
Match: AT5G15510.2 (TPX2 (targeting protein for Xklp2) protein family )

HSP 1 Score: 75.9 bits (185), Expect = 3.2e-14
Identity = 37/74 (50.00%), Postives = 52/74 (70.27%), Query Frame = 0


Query: 41  KPQDFKLHTQERAVKRAMFNYSIATKLYVTELQKKVEEKLHKMIEEEEVRLMRKEMIPRA 100
           +P D  LH+  RAV+RA F+Y +A K+   E  K   E+  K+ EEEE+R +RKE++P+A
Sbjct: 380 RPVDLTLHSDVRAVERAEFDYQVAEKMSFIEQYKMERERQQKLAEEEEIRRLRKELVPKA 439

Query: 101 QLMPYFDRPYFPQR 115
           Q MPYFDRP+ P+R
Sbjct: 440 QPMPYFDRPFIPRR 453

[Close]

BLAST of CmoCh01G004220 vs. TAIR 10
Match: AT1G03780.2 (targeting protein for XKLP2 )

HSP 1 Score: 58.9 bits (141), Expect = 4.1e-09
Identity = 41/126 (32.54%), Postives = 70/126 (55.56%), Query Frame = 0


Query: 7   KSFIKAKDGVRDRVSEKTERVRTPQKVVVKENTKKPQDFKLHTQERAVKRAMFNYSIATK 66
           K   KA+  +++      E+VR P   +        Q+F LH + RAV+RA F++ I  K
Sbjct: 617 KRLFKAQPVIKEDPIPVPEKVRMPLTEI--------QEFNLHVEHRAVERADFDHKIKEK 676

Query: 67  LYVTELQKKVEEKLHKMIEEEE-VRLMRKEMIPRAQLMPYFDRPYFPQRSNRPLTIPREP 126
               +  ++ E +  KM+EEE  ++ MRK M+P A+ +P F++P+ PQ+SN+  T  + P
Sbjct: 677 ENQYKRYRE-ESEAAKMVEEERALKQMRKTMVPHARPVPNFNKPFLPQKSNKGTTKAKSP 733

Query: 127 SFLINK 132
           +  + K
Sbjct: 737 NLRVIK 733

The following BLAST results are available for this feature:

BLAST of CmoCh01G004220 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4I2H7	5.8e-08	32.54	Protein TPX2 OS=Arabidopsis thaliana OX=3702 GN=TPX2 PE=1 SV=1	[more]

BLAST of CmoCh01G004220 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GBJ5	1.1e-78	100.00	protein TPX2-like OS=Cucurbita moschata OX=3662 GN=LOC111452663 PE=3 SV=1	[more]
A0A6J1K9I8	1.1e-75	96.10	protein TPX2 OS=Cucurbita maxima OX=3661 GN=LOC111492897 PE=3 SV=1	[more]
A0A0A0LCD4	3.9e-68	89.68	TPX2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G258180 PE=3 S...	[more]
A0A6J1CNR5	8.2e-66	85.06	protein TPX2 OS=Momordica charantia OX=3673 GN=LOC111013295 PE=3 SV=1	[more]
A0A5D3DX27	7.2e-46	90.43	Protein TPX2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold600G00390 P...	[more]

BLAST of CmoCh01G004220 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022949252.1	2.3e-78	100.00	protein TPX2-like [Cucurbita moschata]	[more]
KAG7036751.1	4.3e-77	98.05	Protein TPX2 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023525926.1	9.6e-77	97.40	protein TPX2-like [Cucurbita pepo subsp. pepo]	[more]
XP_022998171.1	2.4e-75	96.10	protein TPX2 [Cucurbita maxima]	[more]
XP_038877019.1	9.6e-69	91.03	protein TPX2-like [Benincasa hispida]	[more]

BLAST of CmoCh01G004220 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G37478.1	1.9e-35	57.14	TPX2 (targeting protein for Xklp2) protein family	[more]
AT3G01015.1	8.8e-20	51.14	TPX2 (targeting protein for Xklp2) protein family	[more]
AT5G15510.1	1.3e-18	46.08	TPX2 (targeting protein for Xklp2) protein family	[more]
AT5G15510.2	3.2e-14	50.00	TPX2 (targeting protein for Xklp2) protein family	[more]
AT1G03780.2	4.1e-09	32.54	targeting protein for XKLP2	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 69..89
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..31
None	No IPR available	PANTHER	PTHR14326:SF39	TPX2 (TARGETING PROTEIN FOR XKLP2) PROTEIN FAMILY	coord: 12..146
IPR027329	TPX2, C-terminal	PFAM	PF06886	TPX2	coord: 45..126 e-value: 4.2E-20 score: 71.7
IPR009675	TPX2	PANTHER	PTHR14326	TARGETING PROTEIN FOR XKLP2	coord: 12..146

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh01G004220.1	CmoCh01G004220.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032147	activation of protein kinase activity
biological_process	GO:0090307	mitotic spindle assembly
biological_process	GO:0060236	regulation of mitotic spindle organization
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0072686	mitotic spindle
cellular_component	GO:0005880	nuclear microtubule
cellular_component	GO:0005874	microtubule
cellular_component	GO:0005819	spindle
molecular_function	GO:0008017	microtubule binding
molecular_function	GO:0030295	protein kinase activator activity