CmoCh01G004180 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh01G004180
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	protein rough sheath 2 homolog
Location	Cmo_Chr01: 2047553 .. 2048710 (-)
RNA-Seq Expression	CmoCh01G004180
Synteny	CmoCh01G004180

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGGACCGCCAGCGCTGGCAGCCGGAAGAAGACGCACTCCTACGAGCCTACGTCAAGCAATATGGCCCTAAAGAATGGAATCTCATCTCTCAGCGTATGGGGAAGCCTCTCTATCGCGATCCTAAATCCTGTCTGGAGCGCTGGAAGAATTACCTTAAACCTGGCTTGAAGAAAGGCTCCCTCTCTCCCGAGGAGCAGACTCTCGTCATCTCTCTTCAAGCTAAGTACGGCAATAAGTGGAAGAAGATCGCTGCCGAGGTTCCCGGCCGTACGGCCAAGCGCCTCGGCAAGTGGTGGGAGGTTTTTAAAGAGAAGCAACTTAAGAAGTTGCAGAAGGCGCAGAACCTAACGCAGAGGCGCGATTACCAAAATTCCGACGGGAATCTTTCGATCTCCGGTGTTTCCTCGCCGGAGAAGGCGCTACAAGGTCCGTACGATCATATTTTGGAAACCTTCGCTGAGAAGTACGTCCAGCCGAAGCTTTACTCCGCCGCGTTTCAATCTCCTCCTCCTCCCCCGCCGTTGGCCAACGTGATGCCTCGCCTTCCCGTCCCCGACGCTGATCCGGTCCTCTCGCTCGGATCCGTGAACTCTACGACGTCGTCTTCCACCGTCCTTCCTCTGTGGATGAACGTCAACTCCACCAGCACCGCTTCGTCTTCCACCTCGTCGACCACGCCGTCGCCATCGGTGAGTCTCACGCTATCTCCCTCCGAACCGGTCGTTCTCGACTCGGAAATGAACCGATTGTTACCGGTTCAGCAGATGGGAGCCTTAGTCCTATACTGTAAGGAGTTGGAAGAAGGGCGCCAGATTTGGCTTCAACACAAGAAGGAGGCGACATGGCGACTGACTCGATTAGAGCAACAGCTGGAATCGGAGAAAGCGAGAAAGAAGCGAGAGAAAATGGAGGAGATGGAAGCGAAGATACGTAGGTTGAGGGAGGAAGAAATGGCGTATTTGGGAAGAATCGAAAGCGATTACAGAGAGCAAGTAAGTGCTATGCGAAGAGACGCAGAGAACAAAGAGGCAAAGCTGCTGGAAGCCTGGTGCAGCAAGCATACGAAATTAACGAAGCTTGTGGAGCAAATTGGAAATCAGGGGCAAGGGTTGGTTGTTGTAGCAGCAGGGAATTCGAAGGATATGATCCATTGA

mRNA sequence

ATGAAGGACCGCCAGCGCTGGCAGCCGGAAGAAGACGCACTCCTACGAGCCTACGTCAAGCAATATGGCCCTAAAGAATGGAATCTCATCTCTCAGCGTATGGGGAAGCCTCTCTATCGCGATCCTAAATCCTGTCTGGAGCGCTGGAAGAATTACCTTAAACCTGGCTTGAAGAAAGGCTCCCTCTCTCCCGAGGAGCAGACTCTCGTCATCTCTCTTCAAGCTAAGTACGGCAATAAGTGGAAGAAGATCGCTGCCGAGGTTCCCGGCCGTACGGCCAAGCGCCTCGGCAAGTGGTGGGAGGTTTTTAAAGAGAAGCAACTTAAGAAGTTGCAGAAGGCGCAGAACCTAACGCAGAGGCGCGATTACCAAAATTCCGACGGGAATCTTTCGATCTCCGGTGTTTCCTCGCCGGAGAAGGCGCTACAAGGTCCGTACGATCATATTTTGGAAACCTTCGCTGAGAAGTACGTCCAGCCGAAGCTTTACTCCGCCGCGTTTCAATCTCCTCCTCCTCCCCCGCCGTTGGCCAACGTGATGCCTCGCCTTCCCGTCCCCGACGCTGATCCGGTCCTCTCGCTCGGATCCGTGAACTCTACGACGTCGTCTTCCACCGTCCTTCCTCTGTGGATGAACGTCAACTCCACCAGCACCGCTTCGTCTTCCACCTCGTCGACCACGCCGTCGCCATCGGTGAGTCTCACGCTATCTCCCTCCGAACCGGTCGTTCTCGACTCGGAAATGAACCGATTGTTACCGGTTCAGCAGATGGGAGCCTTAGTCCTATACTGTAAGGAGTTGGAAGAAGGGCGCCAGATTTGGCTTCAACACAAGAAGGAGGCGACATGGCGACTGACTCGATTAGAGCAACAGCTGGAATCGGAGAAAGCGAGAAAGAAGCGAGAGAAAATGGAGGAGATGGAAGCGAAGATACGTAGGTTGAGGGAGGAAGAAATGGCGTATTTGGGAAGAATCGAAAGCGATTACAGAGAGCAAGTAAGTGCTATGCGAAGAGACGCAGAGAACAAAGAGGCAAAGCTGCTGGAAGCCTGGTGCAGCAAGCATACGAAATTAACGAAGCTTGTGGAGCAAATTGGAAATCAGGGGCAAGGGTTGGTTGTTGTAGCAGCAGGGAATTCGAAGGATATGATCCATTGA

Coding sequence (CDS)

ATGAAGGACCGCCAGCGCTGGCAGCCGGAAGAAGACGCACTCCTACGAGCCTACGTCAAGCAATATGGCCCTAAAGAATGGAATCTCATCTCTCAGCGTATGGGGAAGCCTCTCTATCGCGATCCTAAATCCTGTCTGGAGCGCTGGAAGAATTACCTTAAACCTGGCTTGAAGAAAGGCTCCCTCTCTCCCGAGGAGCAGACTCTCGTCATCTCTCTTCAAGCTAAGTACGGCAATAAGTGGAAGAAGATCGCTGCCGAGGTTCCCGGCCGTACGGCCAAGCGCCTCGGCAAGTGGTGGGAGGTTTTTAAAGAGAAGCAACTTAAGAAGTTGCAGAAGGCGCAGAACCTAACGCAGAGGCGCGATTACCAAAATTCCGACGGGAATCTTTCGATCTCCGGTGTTTCCTCGCCGGAGAAGGCGCTACAAGGTCCGTACGATCATATTTTGGAAACCTTCGCTGAGAAGTACGTCCAGCCGAAGCTTTACTCCGCCGCGTTTCAATCTCCTCCTCCTCCCCCGCCGTTGGCCAACGTGATGCCTCGCCTTCCCGTCCCCGACGCTGATCCGGTCCTCTCGCTCGGATCCGTGAACTCTACGACGTCGTCTTCCACCGTCCTTCCTCTGTGGATGAACGTCAACTCCACCAGCACCGCTTCGTCTTCCACCTCGTCGACCACGCCGTCGCCATCGGTGAGTCTCACGCTATCTCCCTCCGAACCGGTCGTTCTCGACTCGGAAATGAACCGATTGTTACCGGTTCAGCAGATGGGAGCCTTAGTCCTATACTGTAAGGAGTTGGAAGAAGGGCGCCAGATTTGGCTTCAACACAAGAAGGAGGCGACATGGCGACTGACTCGATTAGAGCAACAGCTGGAATCGGAGAAAGCGAGAAAGAAGCGAGAGAAAATGGAGGAGATGGAAGCGAAGATACGTAGGTTGAGGGAGGAAGAAATGGCGTATTTGGGAAGAATCGAAAGCGATTACAGAGAGCAAGTAAGTGCTATGCGAAGAGACGCAGAGAACAAAGAGGCAAAGCTGCTGGAAGCCTGGTGCAGCAAGCATACGAAATTAACGAAGCTTGTGGAGCAAATTGGAAATCAGGGGCAAGGGTTGGTTGTTGTAGCAGCAGGGAATTCGAAGGATATGATCCATTGA

Protein sequence

MKDRQRWQPEEDALLRAYVKQYGPKEWNLISQRMGKPLYRDPKSCLERWKNYLKPGLKKGSLSPEEQTLVISLQAKYGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQLKKLQKAQNLTQRRDYQNSDGNLSISGVSSPEKALQGPYDHILETFAEKYVQPKLYSAAFQSPPPPPPLANVMPRLPVPDADPVLSLGSVNSTTSSSTVLPLWMNVNSTSTASSSTSSTTPSPSVSLTLSPSEPVVLDSEMNRLLPVQQMGALVLYCKELEEGRQIWLQHKKEATWRLTRLEQQLESEKARKKREKMEEMEAKIRRLREEEMAYLGRIESDYREQVSAMRRDAENKEAKLLEAWCSKHTKLTKLVEQIGNQGQGLVVVAAGNSKDMIH

Homology

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BLAST of CmoCh01G004180 vs. ExPASy Swiss-Prot
Match: O80931 (Transcription factor AS1 OS=Arabidopsis thaliana OX=3702 GN=AS1 PE=1 SV=1)

HSP 1 Score: 289.7 bits (740), Expect = 5.0e-77
Identity = 185/399 (46.37%), Postives = 240/399 (60.15%), Query Frame = 0


Query: 1   MKDRQRWQPEEDALLRAYVKQYGPKEWNLISQRMGKPLYRDPKSCLERWKNYLKPGLKKG 60
           MK+RQRW  EEDALLRAYV+Q+GP+EW+L+S+RM KPL RD KSCLERWKNYLKPG+KKG
Sbjct: 1   MKERQRWSGEEDALLRAYVRQFGPREWHLVSERMNKPLNRDAKSCLERWKNYLKPGIKKG 60

Query: 61  SLSPEEQTLVISLQAKYGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQLKKLQKAQNLTQR 120
           SL+ EEQ LVI LQ K+GNKWKKIAAEVPGRTAKRLGKWWEVFKEKQ ++ +++    + 
Sbjct: 61  SLTEEEQRLVIRLQEKHGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQQREEKESNKRVEP 120

Query: 121 RDYQNSDGNLSISGVSSPEKALQGPYDHILETFAEKYVQPKLYSAAFQSPPPPPPLANVM 180
            D                    +  YD ILE+FAEK V+ +               +NV+
Sbjct: 121 ID--------------------ESKYDRILESFAEKLVKER---------------SNVV 180

Query: 181 PRLPVPDADPVLS------LGSVNSTTSSSTVLPLWMNVNSTSTASSSTSSTTPSPSVSL 240
           P      A  V++      L S       + V+P W+     +T+++  +     PSV+L
Sbjct: 181 PAAAAA-ATVVMANSNGGFLHSEQQVQPPNPVIPPWL-----ATSNNGNNVVARPPSVTL 240

Query: 241 TLSPS-----------------EP---------VVLDSEMNRLLPVQQ---MGALVLYCK 300
           TLSPS                 +P         +VL S M       +   +  LV  C+
Sbjct: 241 TLSPSTVAAAAPQPPIPWLQQQQPERAENGPGGLVLGSMMPSCSGSSESVFLSELVECCR 300

Query: 301 ELEEGRQIWLQHKKEATWRLTRLEQQLESEKARKKREKMEEMEAKIRRLREEEMAYLGRI 360
           ELEEG + W  HKKEA WRL RLE QLESEK  ++REKMEE+EAK++ LREE+   + +I
Sbjct: 301 ELEEGHRAWADHKKEAAWRLRRLELQLESEKTCRQREKMEEIEAKMKALREEQKNAMEKI 358

Query: 361 ESDYREQVSAMRRDAENKEAKLLEAWCSKHTKLTKLVEQ 365
           E +YREQ+  +RRDAE K+ KL + W S+H +LTK +EQ
Sbjct: 361 EGEYREQLVGLRRDAEAKDQKLADQWTSRHIRLTKFLEQ 358

[Close]

BLAST of CmoCh01G004180 vs. ExPASy Swiss-Prot
Match: Q9S7B2 (Protein rough sheath 2 OS=Zea mays OX=4577 GN=RS2 PE=1 SV=1)

HSP 1 Score: 283.1 bits (723), Expect = 4.7e-75
Identity = 180/385 (46.75%), Postives = 236/385 (61.30%), Query Frame = 0


Query: 1   MKDRQRWQPEEDALLRAYVKQYGPKEWNLISQRMGKPLYRDPKSCLERWKNYLKPGLKKG 60
           MK+RQRW+PEEDA+LRAYV+QYGP+EW+L+SQRM   L RD KSCLERWKNYL+PG+KKG
Sbjct: 1   MKERQRWRPEEDAVLRAYVRQYGPREWHLVSQRMNVALDRDAKSCLERWKNYLRPGIKKG 60

Query: 61  SLSPEEQTLVISLQAKYGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQLKKLQKAQNLTQR 120
           SL+ EEQ LVI LQAK+GNKWKKIAAEVPGRTAKRLGKWWEVFKEKQ ++L+ ++     
Sbjct: 61  SLTEEEQRLVIRLQAKHGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQQRELRDSRRPPPE 120

Query: 121 RDYQNSDGNLSISGVSSPEKALQGPYDHILETFAEKYVQPKLYSAAFQSPPPPPPLANVM 180
                           SP++  +G Y+ +LE FAEK V  +   AA  +P P    A V+
Sbjct: 121 ---------------PSPDE--RGRYEWLLENFAEKLVGERPQQAA-AAPSPLLMAAPVL 180

Query: 181 PRLPVPDADPVLSLG-------------SVNSTTSSSTVLP------LWMNVNSTSTASS 240
           P     +A P  +               SV  + +S+ V P       WM       A+ 
Sbjct: 181 PPWLSSNAGPAAAAAAAVAHPPPRPPSPSVTLSLASAAVAPGPPAPAPWM---PDRAAAD 240

Query: 241 STSSTTPSPSVSLTLSPSEPVVLDSEMNRLLPVQQMGALVLYCKELEEGRQIWLQHKKEA 300
           +     PSPS     +P    V+D         Q +  L   C+ELEEGR+ W  H++EA
Sbjct: 241 AAPYGFPSPSQHGGAAPPGMAVVDG--------QALAELAECCRELEEGRRAWAAHRREA 300

Query: 301 TWRLTRLEQQLESEKARKKREKMEEMEAKIRRLREEEMAYLGRIESDYREQVSAMRRDAE 360
            WRL R+EQQLE E+  ++RE  EE EAK+R +R E+ A   R+E D+RE+V+ +RRDA+
Sbjct: 301 AWRLKRVEQQLEMEREMRRREVWEEFEAKMRTMRLEQAAAAERVERDHREKVAELRRDAQ 356

Query: 361 NKEAKLLEAWCSKHTKLTKLVEQIG 367
            KE K+ E W +KH ++ K VEQ+G
Sbjct: 361 VKEEKMAEQWAAKHARVAKFVEQMG 356

[Close]

BLAST of CmoCh01G004180 vs. ExPASy Swiss-Prot
Match: Q94IB1 (Protein rough sheath 2 homolog OS=Oryza sativa subsp. japonica OX=39947 GN=RS2 PE=2 SV=1)

HSP 1 Score: 282.0 bits (720), Expect = 1.0e-74
Identity = 163/365 (44.66%), Postives = 230/365 (63.01%), Query Frame = 0


Query: 1   MKDRQRWQPEEDALLRAYVKQYGPKEWNLISQRMGKPLYRDPKSCLERWKNYLKPGLKKG 60
           M++RQRW+PEEDA+L AYV+QYGP+EW+L+SQRM +PL+RD KSCLERWKNYL+PG+KKG
Sbjct: 6   MRERQRWRPEEDAILLAYVRQYGPREWSLVSQRMNRPLHRDAKSCLERWKNYLRPGIKKG 65

Query: 61  SLSPEEQTLVISLQAKYGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQLKKLQKAQNLTQR 120
           SL+ +EQ LVI LQAK+GNKWKKIAAEVPGRTAKRLGKWWEVFKEKQ ++L   ++  +R
Sbjct: 66  SLTDDEQRLVIRLQAKHGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQQREL---RDRDRR 125

Query: 121 RDYQNSDGNLSISGVSSPEKALQGPYDHILETFAEKYVQPKLYSAAFQSPPPPPPLANVM 180
           R     DG+              G YD +LE FA+K V                      
Sbjct: 126 RLPPPLDGD--------ERGCAGGRYDWLLEDFADKLVNDH------------------- 185

Query: 181 PRLPVPDADPVLSLGSVNSTTSSSTVLPLWMNVNSTSTASSSTSSTTPSPSVSLTLSPSE 240
                            +    ++ +LP WM+ + +S++S S + +  S +V+   +   
Sbjct: 186 -----------------HRRMMAAPILPPWMSSSPSSSSSPSVTLSLASAAVAPAPAAPP 245

Query: 241 PVVLDSEMNRLLPVQQMGALVLYCKELEEGRQIWLQHKKEATWRLTRLEQQLESEKARKK 300
           P         ++  + M      C+E+EEG++ W  H+KEA WR+ R+E QLE+E+A ++
Sbjct: 246 PTWGGGGGGEVVVAELMEC----CREMEEGQRAWAAHRKEAAWRMKRVEMQLETERACRR 305

Query: 301 REKMEEMEAKIRRLREEEMAYLGRIESDYREQVSAMRRDAENKEAKLLEAWCSKHTKLTK 360
           RE  EE EAK+R LREE+ A + R+E++YRE+++ +RRDAE KE K+ E W +KH +L K
Sbjct: 306 REATEEFEAKMRALREEQAAAVERVEAEYREKMAGLRRDAEAKEQKMAEQWAAKHARLAK 319

Query: 361 LVEQI 366
            ++Q+
Sbjct: 366 FLDQV 319

[Close]

BLAST of CmoCh01G004180 vs. ExPASy Swiss-Prot
Match: P81392 (Myb-related protein 306 OS=Antirrhinum majus OX=4151 GN=MYB306 PE=2 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 3.9e-21
Identity = 85/248 (34.27%), Postives = 126/248 (50.81%), Query Frame = 0


Query: 7   WQPEEDALLRAYVKQYGPKEWNLISQRMGKPLYRDPKSCLERWKNYLKPGLKKGSLSPEE 66
           W PEED +L +Y++++GP  W  I    G  L R  KSC  RW NYL+PG+K+G  +  E
Sbjct: 17  WTPEEDIILVSYIQEHGPGNWRAIPSNTG--LLRCSKSCRLRWTNYLRPGIKRGDFTEHE 76

Query: 67  QTLVISLQAKYGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQLKKLQKAQNLTQRRDYQNS 126
           + ++I LQA  GN+W  IA+ +P RT   +  +W    +K+L+KLQ  +N       +  
Sbjct: 77  EKMIIHLQALLGNRWAAIASYLPHRTDNDIKNYWNTHLKKKLEKLQSPEN------GKCQ 136

Query: 127 DGNLSISGVSSPEKALQGPYDHILET---FAEKYVQPKLYSAAFQSPPPPPPLANVMPRL 186
           DGN   S V S +   +G ++  L+T    A++ +   L      S    P L+ V    
Sbjct: 137 DGN---SSVDSDKSVSKGQWERRLQTDIHMAKQALCDALSLDKTSSSTDDPKLSTVQTTQ 196

Query: 187 PVPDADPVLSLGSVNSTTSSSTVLPLW-----MNVNSTSTASSSTSSTTP--SPSVSL-T 244
           P P         + +S  + + +L  W     +N +STS A SS S+TT    PSV L T
Sbjct: 197 PRP-----FQASTYSSAENIARLLENWKKKSPVNASSTSQAGSSESTTTSFNYPSVCLST 248

[Close]

BLAST of CmoCh01G004180 vs. ExPASy Swiss-Prot
Match: Q10MB4 (Transcription factor MYB2 OS=Oryza sativa subsp. japonica OX=39947 GN=MYB2 PE=2 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 3.6e-19
Identity = 47/119 (39.50%), Postives = 72/119 (60.50%), Query Frame = 0


Query: 4   RQRWQPEEDALLRAYVKQYGPKEWNLISQRMGKPLYRDPKSCLERWKNYLKPGLKKGSLS 63
           R  W  EED LL  Y+  +G   WN +++  G  L R  KSC  RW NYL+P L++G+++
Sbjct: 22  RGPWTVEEDLLLVNYIAAHGEGRWNSLARSAG--LKRTGKSCRLRWLNYLRPDLRRGNIT 81

Query: 64  PEEQTLVISLQAKYGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQLKKLQKAQNLTQRRD 123
           P+EQ L++ L +++GN+W KIA  +PGRT   +  +W    +K  K+L+   N  Q +D
Sbjct: 82  PQEQLLILELHSRWGNRWSKIAQHLPGRTDNEIKNYWRTRVQKHAKQLKCDVNSQQFKD 138

[Close]

BLAST of CmoCh01G004180 vs. ExPASy TrEMBL
Match: A0A6J1GCE3 (protein rough sheath 2 homolog OS=Cucurbita moschata OX=3662 GN=LOC111452685 PE=4 SV=1)

HSP 1 Score: 739.2 bits (1907), Expect = 8.8e-210
Identity = 385/385 (100.00%), Postives = 385/385 (100.00%), Query Frame = 0


Query: 1   MKDRQRWQPEEDALLRAYVKQYGPKEWNLISQRMGKPLYRDPKSCLERWKNYLKPGLKKG 60
           MKDRQRWQPEEDALLRAYVKQYGPKEWNLISQRMGKPLYRDPKSCLERWKNYLKPGLKKG
Sbjct: 1   MKDRQRWQPEEDALLRAYVKQYGPKEWNLISQRMGKPLYRDPKSCLERWKNYLKPGLKKG 60

Query: 61  SLSPEEQTLVISLQAKYGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQLKKLQKAQNLTQR 120
           SLSPEEQTLVISLQAKYGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQLKKLQKAQNLTQR
Sbjct: 61  SLSPEEQTLVISLQAKYGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQLKKLQKAQNLTQR 120

Query: 121 RDYQNSDGNLSISGVSSPEKALQGPYDHILETFAEKYVQPKLYSAAFQSPPPPPPLANVM 180
           RDYQNSDGNLSISGVSSPEKALQGPYDHILETFAEKYVQPKLYSAAFQSPPPPPPLANVM
Sbjct: 121 RDYQNSDGNLSISGVSSPEKALQGPYDHILETFAEKYVQPKLYSAAFQSPPPPPPLANVM 180

Query: 181 PRLPVPDADPVLSLGSVNSTTSSSTVLPLWMNVNSTSTASSSTSSTTPSPSVSLTLSPSE 240
           PRLPVPDADPVLSLGSVNSTTSSSTVLPLWMNVNSTSTASSSTSSTTPSPSVSLTLSPSE
Sbjct: 181 PRLPVPDADPVLSLGSVNSTTSSSTVLPLWMNVNSTSTASSSTSSTTPSPSVSLTLSPSE 240

Query: 241 PVVLDSEMNRLLPVQQMGALVLYCKELEEGRQIWLQHKKEATWRLTRLEQQLESEKARKK 300
           PVVLDSEMNRLLPVQQMGALVLYCKELEEGRQIWLQHKKEATWRLTRLEQQLESEKARKK
Sbjct: 241 PVVLDSEMNRLLPVQQMGALVLYCKELEEGRQIWLQHKKEATWRLTRLEQQLESEKARKK 300

Query: 301 REKMEEMEAKIRRLREEEMAYLGRIESDYREQVSAMRRDAENKEAKLLEAWCSKHTKLTK 360
           REKMEEMEAKIRRLREEEMAYLGRIESDYREQVSAMRRDAENKEAKLLEAWCSKHTKLTK
Sbjct: 301 REKMEEMEAKIRRLREEEMAYLGRIESDYREQVSAMRRDAENKEAKLLEAWCSKHTKLTK 360

Query: 361 LVEQIGNQGQGLVVVAAGNSKDMIH 386
           LVEQIGNQGQGLVVVAAGNSKDMIH
Sbjct: 361 LVEQIGNQGQGLVVVAAGNSKDMIH 385

[Close]

BLAST of CmoCh01G004180 vs. ExPASy TrEMBL
Match: A0A6J1KCH4 (protein rough sheath 2 homolog OS=Cucurbita maxima OX=3661 GN=LOC111492624 PE=4 SV=1)

HSP 1 Score: 724.5 bits (1869), Expect = 2.2e-205
Identity = 379/385 (98.44%), Postives = 381/385 (98.96%), Query Frame = 0


Query: 1   MKDRQRWQPEEDALLRAYVKQYGPKEWNLISQRMGKPLYRDPKSCLERWKNYLKPGLKKG 60
           MKDRQRWQPEEDALLRAYVKQYGPKEWNLISQRMGKPL+RDPKSCLERWKNYLKPGLKKG
Sbjct: 1   MKDRQRWQPEEDALLRAYVKQYGPKEWNLISQRMGKPLHRDPKSCLERWKNYLKPGLKKG 60

Query: 61  SLSPEEQTLVISLQAKYGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQLKKLQKAQNLTQR 120
           SLSPEEQTLVISLQAKYGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQLKKLQKAQNLTQR
Sbjct: 61  SLSPEEQTLVISLQAKYGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQLKKLQKAQNLTQR 120

Query: 121 RDYQNSDGNLSISGVSSPEKALQGPYDHILETFAEKYVQPKLYSAAFQSPPPPPPLANVM 180
           RDYQNSDGNLSISGVSSPEKALQGPYDHILETFAEKYVQPKLYS AFQSPPPPPPLAN+M
Sbjct: 121 RDYQNSDGNLSISGVSSPEKALQGPYDHILETFAEKYVQPKLYSTAFQSPPPPPPLANLM 180

Query: 181 PRLPVPDADPVLSLGSVNSTTSSSTVLPLWMNVNSTSTASSSTSSTTPSPSVSLTLSPSE 240
           PRLPVPDADPVLSLGSVNSTTSSS VLPLWMNVNSTSTASSSTSSTTPSPSVSLTLSPSE
Sbjct: 181 PRLPVPDADPVLSLGSVNSTTSSSNVLPLWMNVNSTSTASSSTSSTTPSPSVSLTLSPSE 240

Query: 241 PVVLDSEMNRLLPVQQMGALVLYCKELEEGRQIWLQHKKEATWRLTRLEQQLESEKARKK 300
           PVVLDSEMNRLLPVQQMGALVLYCKELEEGRQIWLQHKKEATWRL RLEQQLESEKARKK
Sbjct: 241 PVVLDSEMNRLLPVQQMGALVLYCKELEEGRQIWLQHKKEATWRLNRLEQQLESEKARKK 300

Query: 301 REKMEEMEAKIRRLREEEMAYLGRIESDYREQVSAMRRDAENKEAKLLEAWCSKHTKLTK 360
           REKMEEMEAKIRRLREEEMAYLGRIESDYREQVSAMRRDAENKEAKLLEAWCSKHTKLTK
Sbjct: 301 REKMEEMEAKIRRLREEEMAYLGRIESDYREQVSAMRRDAENKEAKLLEAWCSKHTKLTK 360

Query: 361 LVEQIGNQGQGLVVVAAGNSKDMIH 386
           LVEQIGNQGQGLVVV AGNSKDMIH
Sbjct: 361 LVEQIGNQGQGLVVV-AGNSKDMIH 384

[Close]

BLAST of CmoCh01G004180 vs. ExPASy TrEMBL
Match: A0A6J1FAF4 (protein rough sheath 2 homolog OS=Cucurbita moschata OX=3662 GN=LOC111442290 PE=4 SV=1)

HSP 1 Score: 639.8 bits (1649), Expect = 7.3e-180
Identity = 330/385 (85.71%), Postives = 360/385 (93.51%), Query Frame = 0


Query: 1   MKDRQRWQPEEDALLRAYVKQYGPKEWNLISQRMGKPLYRDPKSCLERWKNYLKPGLKKG 60
           MKDRQRWQPEEDALLRAYVKQYGPKEWNLISQRMGKPL+RDPKSCLERWKNYLKP LKKG
Sbjct: 1   MKDRQRWQPEEDALLRAYVKQYGPKEWNLISQRMGKPLHRDPKSCLERWKNYLKPDLKKG 60

Query: 61  SLSPEEQTLVISLQAKYGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQLKKLQKAQNLTQR 120
           SLSP+EQTLVISLQAKYGNKWKKIAAEVPGRTAKRLGKWWEVF+EKQLK+LQK QNLTQR
Sbjct: 61  SLSPDEQTLVISLQAKYGNKWKKIAAEVPGRTAKRLGKWWEVFREKQLKQLQKTQNLTQR 120

Query: 121 RDYQNSDGNLSISGVSSPEKALQGPYDHILETFAEKYVQPKLYSAAFQSPPPPPPLANVM 180
           RDYQNSDGN+ + GVSSPEKA+QGPYDHILETFAEKYVQPK+Y+AAFQSPPPP       
Sbjct: 121 RDYQNSDGNIPVVGVSSPEKAVQGPYDHILETFAEKYVQPKIYAAAFQSPPPP------- 180

Query: 181 PRLPVPDADPVLSLGSVNSTTSSSTVLPLWMNVNSTSTASSSTSSTTPSPSVSLTLSPSE 240
           PRL VP+ADPVLSLGSV+STTSS TVLPLWMNVNSTSTASSST+STTPSPSVSLTLSPSE
Sbjct: 181 PRLSVPEADPVLSLGSVSSTTSSPTVLPLWMNVNSTSTASSSTASTTPSPSVSLTLSPSE 240

Query: 241 PVVLDSEMNRLLPVQQMGALVLYCKELEEGRQIWLQHKKEATWRLTRLEQQLESEKARKK 300
           P +L+SE+NR+LPVQQMGALV YCK+LEEGRQ W+QHKKEATWRL RLEQQLESEKARKK
Sbjct: 241 PAILESEVNRILPVQQMGALVQYCKDLEEGRQNWVQHKKEATWRLNRLEQQLESEKARKK 300

Query: 301 REKMEEMEAKIRRLREEEMAYLGRIESDYREQVSAMRRDAENKEAKLLEAWCSKHTKLTK 360
           REKMEEMEAKI+RLREEEMAYLGRIESDYREQ+SA++RDA++KEAKL+E+WCSKH KL K
Sbjct: 301 REKMEEMEAKIQRLREEEMAYLGRIESDYREQLSALQRDADSKEAKLVESWCSKHAKLAK 360

Query: 361 LVEQIGNQGQGLVVVAAGNSKDMIH 386
           LVE+ G QG GLV+V  GNS D++H
Sbjct: 361 LVEKYGVQGHGLVMV-TGNSNDIVH 377

[Close]

BLAST of CmoCh01G004180 vs. ExPASy TrEMBL
Match: A0A6J1IZB3 (protein rough sheath 2 homolog OS=Cucurbita maxima OX=3661 GN=LOC111482044 PE=4 SV=1)

HSP 1 Score: 638.3 bits (1645), Expect = 2.1e-179
Identity = 330/385 (85.71%), Postives = 359/385 (93.25%), Query Frame = 0


Query: 1   MKDRQRWQPEEDALLRAYVKQYGPKEWNLISQRMGKPLYRDPKSCLERWKNYLKPGLKKG 60
           MKDRQRWQPEEDALLRAYVKQYGPKEWNLISQRMGKPL+RDPKSCLERWKNYLKPGLKKG
Sbjct: 1   MKDRQRWQPEEDALLRAYVKQYGPKEWNLISQRMGKPLHRDPKSCLERWKNYLKPGLKKG 60

Query: 61  SLSPEEQTLVISLQAKYGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQLKKLQKAQNLTQR 120
           SLSP+EQTLVISLQAKYGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQLK+LQK QNLTQR
Sbjct: 61  SLSPDEQTLVISLQAKYGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQLKQLQKTQNLTQR 120

Query: 121 RDYQNSDGNLSISGVSSPEKALQGPYDHILETFAEKYVQPKLYSAAFQSPPPPPPLANVM 180
            DYQNSDGN+ I GVSSPEKA+QGPYDHILETFAEKYVQPK+Y+AAFQSPPPPPP     
Sbjct: 121 HDYQNSDGNIPIVGVSSPEKAVQGPYDHILETFAEKYVQPKIYAAAFQSPPPPPP----P 180

Query: 181 PRLPVPDADPVLSLGSVNSTTSSSTVLPLWMNVNSTSTASSSTSSTTPSPSVSLTLSPSE 240
           PRL VP+ADPVLSLGSV+STTSS TVLPLWMN NSTSTASSST STTPSPSVSLTLSPSE
Sbjct: 181 PRLSVPEADPVLSLGSVSSTTSSPTVLPLWMNANSTSTASSSTVSTTPSPSVSLTLSPSE 240

Query: 241 PVVLDSEMNRLLPVQQMGALVLYCKELEEGRQIWLQHKKEATWRLTRLEQQLESEKARKK 300
           P + ++E+NR+LPVQQMGALV YCK+LEEGRQ W+QHKKEATWRL RLE+QLESEKARKK
Sbjct: 241 PAINETEVNRILPVQQMGALVQYCKDLEEGRQSWVQHKKEATWRLNRLEKQLESEKARKK 300

Query: 301 REKMEEMEAKIRRLREEEMAYLGRIESDYREQVSAMRRDAENKEAKLLEAWCSKHTKLTK 360
           REKMEEMEAKI+RLREEE AYLGRIESDYREQ+SA++RDA++KEAKL+E+WCSKH KL K
Sbjct: 301 REKMEEMEAKIQRLREEESAYLGRIESDYREQLSALQRDADSKEAKLVESWCSKHAKLAK 360

Query: 361 LVEQIGNQGQGLVVVAAGNSKDMIH 386
           LVE+ G QG GLV+V  GNSKD++H
Sbjct: 361 LVEKYGVQGHGLVMV-TGNSKDIVH 380

[Close]

BLAST of CmoCh01G004180 vs. ExPASy TrEMBL
Match: A0A5D3CNU9 (Transcription factor AS1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold90G00170 PE=4 SV=1)

HSP 1 Score: 533.1 bits (1372), Expect = 9.6e-148
Identity = 295/386 (76.42%), Postives = 324/386 (83.94%), Query Frame = 0


Query: 1   MKDRQRWQPEEDALLRAYVKQYGPKEWNLISQRMGKPLYRDPKSCLERWKNYLKPGLKKG 60
           MKDRQRWQPEEDALLRAYVKQYGPKEWNLIS RM  PL+RDPKSCLERWKNYLKPGLKKG
Sbjct: 1   MKDRQRWQPEEDALLRAYVKQYGPKEWNLISHRMPNPLHRDPKSCLERWKNYLKPGLKKG 60

Query: 61  SLSPEEQTLVISLQAKYGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQLKKLQKAQNLTQR 120
           SLSPEEQ+LVISLQAKYGNKWKKIAAEVPGRT KRLGKWWEVFKEKQLK+L KA NLTQ 
Sbjct: 61  SLSPEEQSLVISLQAKYGNKWKKIAAEVPGRTPKRLGKWWEVFKEKQLKQLHKANNLTQ- 120

Query: 121 RDYQNSDGNLSIS-GVSSPEKALQGPYDHILETFAEKYVQPKLYSAAFQSPPPPPPLANV 180
               + D NL IS  VSSPEKALQGPYDHILETFAEKYVQPKLY         P P    
Sbjct: 121 ---SSLDPNLPISLAVSSPEKALQGPYDHILETFAEKYVQPKLY---------PHP---- 180

Query: 181 MPRLPVPDADPVLSLGSVNSTTSSSTVLPLWMNVNSTSTASSSTSSTTPSPSVSLTLSPS 240
              +P+PDADP+LSLGSV STTSSST+LPLWMNVNSTSTASSST STTPSPSVSLTLSPS
Sbjct: 181 ---IPIPDADPLLSLGSVTSTTSSSTLLPLWMNVNSTSTASSSTCSTTPSPSVSLTLSPS 240

Query: 241 EPVVLDSEMNRLLPVQQMGALVLYCKELEEGRQIWLQHKKEATWRLTRLEQQLESEKARK 300
           EP  L+SE+NR+      GALV YCKE+EEGRQ W+QHKKEA+WRL RLEQQLESEKARK
Sbjct: 241 EPGCLESEVNRI------GALVQYCKEVEEGRQSWVQHKKEASWRLNRLEQQLESEKARK 300

Query: 301 KREKMEEMEAKIRRLREEEMAYLGRIESDYREQVSAMRRDAENKEAKLLEAWCSKHTKLT 360
           KREKMEEMEAKI+RLREEE  YLG IE DY+EQ++A++R+A+ KEAKL+E WC+KH+KL 
Sbjct: 301 KREKMEEMEAKIQRLREEERVYLGGIERDYKEQLNALQREADCKEAKLVEDWCNKHSKLV 354

Query: 361 KLVEQIGNQGQGLVVVAAGNSKDMIH 386
           KLVE+ G  G GL+    G SKD++H
Sbjct: 361 KLVEKFG--GHGLL----GVSKDIVH 354

[Close]

BLAST of CmoCh01G004180 vs. NCBI nr
Match: XP_022949284.1 (protein rough sheath 2 homolog [Cucurbita moschata])

HSP 1 Score: 739.2 bits (1907), Expect = 1.8e-209
Identity = 385/385 (100.00%), Postives = 385/385 (100.00%), Query Frame = 0


Query: 1   MKDRQRWQPEEDALLRAYVKQYGPKEWNLISQRMGKPLYRDPKSCLERWKNYLKPGLKKG 60
           MKDRQRWQPEEDALLRAYVKQYGPKEWNLISQRMGKPLYRDPKSCLERWKNYLKPGLKKG
Sbjct: 1   MKDRQRWQPEEDALLRAYVKQYGPKEWNLISQRMGKPLYRDPKSCLERWKNYLKPGLKKG 60

Query: 61  SLSPEEQTLVISLQAKYGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQLKKLQKAQNLTQR 120
           SLSPEEQTLVISLQAKYGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQLKKLQKAQNLTQR
Sbjct: 61  SLSPEEQTLVISLQAKYGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQLKKLQKAQNLTQR 120

Query: 121 RDYQNSDGNLSISGVSSPEKALQGPYDHILETFAEKYVQPKLYSAAFQSPPPPPPLANVM 180
           RDYQNSDGNLSISGVSSPEKALQGPYDHILETFAEKYVQPKLYSAAFQSPPPPPPLANVM
Sbjct: 121 RDYQNSDGNLSISGVSSPEKALQGPYDHILETFAEKYVQPKLYSAAFQSPPPPPPLANVM 180

Query: 181 PRLPVPDADPVLSLGSVNSTTSSSTVLPLWMNVNSTSTASSSTSSTTPSPSVSLTLSPSE 240
           PRLPVPDADPVLSLGSVNSTTSSSTVLPLWMNVNSTSTASSSTSSTTPSPSVSLTLSPSE
Sbjct: 181 PRLPVPDADPVLSLGSVNSTTSSSTVLPLWMNVNSTSTASSSTSSTTPSPSVSLTLSPSE 240

Query: 241 PVVLDSEMNRLLPVQQMGALVLYCKELEEGRQIWLQHKKEATWRLTRLEQQLESEKARKK 300
           PVVLDSEMNRLLPVQQMGALVLYCKELEEGRQIWLQHKKEATWRLTRLEQQLESEKARKK
Sbjct: 241 PVVLDSEMNRLLPVQQMGALVLYCKELEEGRQIWLQHKKEATWRLTRLEQQLESEKARKK 300

Query: 301 REKMEEMEAKIRRLREEEMAYLGRIESDYREQVSAMRRDAENKEAKLLEAWCSKHTKLTK 360
           REKMEEMEAKIRRLREEEMAYLGRIESDYREQVSAMRRDAENKEAKLLEAWCSKHTKLTK
Sbjct: 301 REKMEEMEAKIRRLREEEMAYLGRIESDYREQVSAMRRDAENKEAKLLEAWCSKHTKLTK 360

Query: 361 LVEQIGNQGQGLVVVAAGNSKDMIH 386
           LVEQIGNQGQGLVVVAAGNSKDMIH
Sbjct: 361 LVEQIGNQGQGLVVVAAGNSKDMIH 385

[Close]

BLAST of CmoCh01G004180 vs. NCBI nr
Match: KAG7036747.1 (Transcription factor AS1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 735.3 bits (1897), Expect = 2.6e-208
Identity = 383/385 (99.48%), Postives = 384/385 (99.74%), Query Frame = 0


Query: 1   MKDRQRWQPEEDALLRAYVKQYGPKEWNLISQRMGKPLYRDPKSCLERWKNYLKPGLKKG 60
           MKDRQRWQPEEDALLRAYVKQYGPKEWNLISQRMGKPL+RDPKSCLERWKNYLKPGLKKG
Sbjct: 1   MKDRQRWQPEEDALLRAYVKQYGPKEWNLISQRMGKPLHRDPKSCLERWKNYLKPGLKKG 60

Query: 61  SLSPEEQTLVISLQAKYGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQLKKLQKAQNLTQR 120
           SLSPEEQTLVISLQAKYGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQLKKLQKAQNLTQR
Sbjct: 61  SLSPEEQTLVISLQAKYGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQLKKLQKAQNLTQR 120

Query: 121 RDYQNSDGNLSISGVSSPEKALQGPYDHILETFAEKYVQPKLYSAAFQSPPPPPPLANVM 180
           RDYQNSDGNLSISGVSSPEKALQGPYDHILETFAEKYVQPKLYSAAFQSPPPPPPLANVM
Sbjct: 121 RDYQNSDGNLSISGVSSPEKALQGPYDHILETFAEKYVQPKLYSAAFQSPPPPPPLANVM 180

Query: 181 PRLPVPDADPVLSLGSVNSTTSSSTVLPLWMNVNSTSTASSSTSSTTPSPSVSLTLSPSE 240
           PRLPVPDADPVLSLGSVNSTTSSSTVLPLWMNVNSTSTASSSTSSTTPSPSVSLTLSPSE
Sbjct: 181 PRLPVPDADPVLSLGSVNSTTSSSTVLPLWMNVNSTSTASSSTSSTTPSPSVSLTLSPSE 240

Query: 241 PVVLDSEMNRLLPVQQMGALVLYCKELEEGRQIWLQHKKEATWRLTRLEQQLESEKARKK 300
           PVVLDSEMNRLLPVQQMGALVLYCKELEEGRQIWLQHKKEATWRL RLEQQLESEKARKK
Sbjct: 241 PVVLDSEMNRLLPVQQMGALVLYCKELEEGRQIWLQHKKEATWRLNRLEQQLESEKARKK 300

Query: 301 REKMEEMEAKIRRLREEEMAYLGRIESDYREQVSAMRRDAENKEAKLLEAWCSKHTKLTK 360
           REKMEEMEAKIRRLREEEMAYLGRIESDYREQVSAMRRDAENKEAKLLEAWCSKHTKLTK
Sbjct: 301 REKMEEMEAKIRRLREEEMAYLGRIESDYREQVSAMRRDAENKEAKLLEAWCSKHTKLTK 360

Query: 361 LVEQIGNQGQGLVVVAAGNSKDMIH 386
           LVEQIGNQGQGLVVVAAGNSKDMIH
Sbjct: 361 LVEQIGNQGQGLVVVAAGNSKDMIH 385

[Close]

BLAST of CmoCh01G004180 vs. NCBI nr
Match: XP_023525837.1 (protein rough sheath 2 homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 725.3 bits (1871), Expect = 2.7e-205
Identity = 381/386 (98.70%), Postives = 382/386 (98.96%), Query Frame = 0


Query: 1   MKDRQRWQPEEDALLRAYVKQYGPKEWNLISQRMGKPLYRDPKSCLERWKNYLKPGLKKG 60
           MKDRQRWQPEEDALLRAYVKQYGPKEWNLISQRMGKPL+RDPKSCLERWKNYLKPGLKKG
Sbjct: 1   MKDRQRWQPEEDALLRAYVKQYGPKEWNLISQRMGKPLHRDPKSCLERWKNYLKPGLKKG 60

Query: 61  SLSPEEQTLVISLQAKYGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQLKKLQKAQNLTQR 120
           SLS EEQTLVISLQAKYGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQLKKLQKAQNLTQR
Sbjct: 61  SLSAEEQTLVISLQAKYGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQLKKLQKAQNLTQR 120

Query: 121 RDYQNSDGNLSISGVSSPEKALQGPYDHILETFAEKYVQPKLYSAAFQS-PPPPPPLANV 180
           RDYQNSDGNLSISGVSSPEKALQGPYDHILETFAEKYVQPKLYSAAFQS PPPPPPLANV
Sbjct: 121 RDYQNSDGNLSISGVSSPEKALQGPYDHILETFAEKYVQPKLYSAAFQSPPPPPPPLANV 180

Query: 181 MPRLPVPDADPVLSLGSVNSTTSSSTVLPLWMNVNSTSTASSSTSSTTPSPSVSLTLSPS 240
           MPRLPVPDADPVLSLGSVNSTTSSSTVLPLWMNVNSTSTASSSTSSTTPSPSVSLTLSPS
Sbjct: 181 MPRLPVPDADPVLSLGSVNSTTSSSTVLPLWMNVNSTSTASSSTSSTTPSPSVSLTLSPS 240

Query: 241 EPVVLDSEMNRLLPVQQMGALVLYCKELEEGRQIWLQHKKEATWRLTRLEQQLESEKARK 300
           EPVVLDSEMNRLLPVQQMGALVLYCKELEEGRQ WLQHKKEATWRL RLEQQLESEKARK
Sbjct: 241 EPVVLDSEMNRLLPVQQMGALVLYCKELEEGRQSWLQHKKEATWRLNRLEQQLESEKARK 300

Query: 301 KREKMEEMEAKIRRLREEEMAYLGRIESDYREQVSAMRRDAENKEAKLLEAWCSKHTKLT 360
           KREKMEEMEAKIRRLREEEMAYLGRIESDYREQVSAMRRDAENKEAKLLEAWCSKHTKLT
Sbjct: 301 KREKMEEMEAKIRRLREEEMAYLGRIESDYREQVSAMRRDAENKEAKLLEAWCSKHTKLT 360

Query: 361 KLVEQIGNQGQGLVVVAAGNSKDMIH 386
           KLVEQIGNQGQGLVVVAAGNSKDMIH
Sbjct: 361 KLVEQIGNQGQGLVVVAAGNSKDMIH 386

[Close]

BLAST of CmoCh01G004180 vs. NCBI nr
Match: XP_022997764.1 (protein rough sheath 2 homolog [Cucurbita maxima])

HSP 1 Score: 724.5 bits (1869), Expect = 4.6e-205
Identity = 379/385 (98.44%), Postives = 381/385 (98.96%), Query Frame = 0


Query: 1   MKDRQRWQPEEDALLRAYVKQYGPKEWNLISQRMGKPLYRDPKSCLERWKNYLKPGLKKG 60
           MKDRQRWQPEEDALLRAYVKQYGPKEWNLISQRMGKPL+RDPKSCLERWKNYLKPGLKKG
Sbjct: 1   MKDRQRWQPEEDALLRAYVKQYGPKEWNLISQRMGKPLHRDPKSCLERWKNYLKPGLKKG 60

Query: 61  SLSPEEQTLVISLQAKYGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQLKKLQKAQNLTQR 120
           SLSPEEQTLVISLQAKYGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQLKKLQKAQNLTQR
Sbjct: 61  SLSPEEQTLVISLQAKYGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQLKKLQKAQNLTQR 120

Query: 121 RDYQNSDGNLSISGVSSPEKALQGPYDHILETFAEKYVQPKLYSAAFQSPPPPPPLANVM 180
           RDYQNSDGNLSISGVSSPEKALQGPYDHILETFAEKYVQPKLYS AFQSPPPPPPLAN+M
Sbjct: 121 RDYQNSDGNLSISGVSSPEKALQGPYDHILETFAEKYVQPKLYSTAFQSPPPPPPLANLM 180

Query: 181 PRLPVPDADPVLSLGSVNSTTSSSTVLPLWMNVNSTSTASSSTSSTTPSPSVSLTLSPSE 240
           PRLPVPDADPVLSLGSVNSTTSSS VLPLWMNVNSTSTASSSTSSTTPSPSVSLTLSPSE
Sbjct: 181 PRLPVPDADPVLSLGSVNSTTSSSNVLPLWMNVNSTSTASSSTSSTTPSPSVSLTLSPSE 240

Query: 241 PVVLDSEMNRLLPVQQMGALVLYCKELEEGRQIWLQHKKEATWRLTRLEQQLESEKARKK 300
           PVVLDSEMNRLLPVQQMGALVLYCKELEEGRQIWLQHKKEATWRL RLEQQLESEKARKK
Sbjct: 241 PVVLDSEMNRLLPVQQMGALVLYCKELEEGRQIWLQHKKEATWRLNRLEQQLESEKARKK 300

Query: 301 REKMEEMEAKIRRLREEEMAYLGRIESDYREQVSAMRRDAENKEAKLLEAWCSKHTKLTK 360
           REKMEEMEAKIRRLREEEMAYLGRIESDYREQVSAMRRDAENKEAKLLEAWCSKHTKLTK
Sbjct: 301 REKMEEMEAKIRRLREEEMAYLGRIESDYREQVSAMRRDAENKEAKLLEAWCSKHTKLTK 360

Query: 361 LVEQIGNQGQGLVVVAAGNSKDMIH 386
           LVEQIGNQGQGLVVV AGNSKDMIH
Sbjct: 361 LVEQIGNQGQGLVVV-AGNSKDMIH 384

[Close]

BLAST of CmoCh01G004180 vs. NCBI nr
Match: KAG6607046.1 (Transcription factor AS1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 677.9 bits (1748), Expect = 5.0e-191
Identity = 358/385 (92.99%), Postives = 359/385 (93.25%), Query Frame = 0


Query: 1   MKDRQRWQPEEDALLRAYVKQYGPKEWNLISQRMGKPLYRDPKSCLERWKNYLKPGLKKG 60
           MKDRQRWQPEEDALLRAYVKQYGPKEWNLISQRMGKPL+RDPKSCLERWKNYLKPGLKKG
Sbjct: 1   MKDRQRWQPEEDALLRAYVKQYGPKEWNLISQRMGKPLHRDPKSCLERWKNYLKPGLKKG 60

Query: 61  SLSPEEQTLVISLQAKYGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQLKKLQKAQNLTQR 120
           SLSPEEQTLVISLQAKYGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQLKKLQKAQNLTQR
Sbjct: 61  SLSPEEQTLVISLQAKYGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQLKKLQKAQNLTQR 120

Query: 121 RDYQNSDGNLSISGVSSPEKALQGPYDHILETFAEKYVQPKLYSAAFQSPPPPPPLANVM 180
           RDYQNSDGNLSISGVSSPEKALQGPYDHILETFAEKYVQPKLYSAAFQSPPPPPPLANVM
Sbjct: 121 RDYQNSDGNLSISGVSSPEKALQGPYDHILETFAEKYVQPKLYSAAFQSPPPPPPLANVM 180

Query: 181 PRLPVPDADPVLSLGSVNSTTSSSTVLPLWMNVNSTSTASSSTSSTTPSPSVSLTLSPSE 240
           PRLPVPDADPVLSLGSVNSTTSSSTVLPLWMNVNSTSTASSSTSSTTPSPS         
Sbjct: 181 PRLPVPDADPVLSLGSVNSTTSSSTVLPLWMNVNSTSTASSSTSSTTPSPS--------- 240

Query: 241 PVVLDSEMNRLLPVQQMGALVLYCKELEEGRQIWLQHKKEATWRLTRLEQQLESEKARKK 300
                           MGALVLYCKELEEGRQIWLQHKKEATWRL RLEQQLESEKARKK
Sbjct: 241 ----------------MGALVLYCKELEEGRQIWLQHKKEATWRLNRLEQQLESEKARKK 300

Query: 301 REKMEEMEAKIRRLREEEMAYLGRIESDYREQVSAMRRDAENKEAKLLEAWCSKHTKLTK 360
           REKMEEMEAKIRRLREEEMAYLGRIESDYREQVSAMRRDAENKEAKLLEAWCSKHTKLTK
Sbjct: 301 REKMEEMEAKIRRLREEEMAYLGRIESDYREQVSAMRRDAENKEAKLLEAWCSKHTKLTK 360

Query: 361 LVEQIGNQGQGLVVVAAGNSKDMIH 386
           LVEQIGNQGQGLVVVAAGNSKDMIH
Sbjct: 361 LVEQIGNQGQGLVVVAAGNSKDMIH 360

[Close]

BLAST of CmoCh01G004180 vs. TAIR 10
Match: AT2G37630.1 (myb-like HTH transcriptional regulator family protein )

HSP 1 Score: 289.7 bits (740), Expect = 3.6e-78
Identity = 185/399 (46.37%), Postives = 240/399 (60.15%), Query Frame = 0


Query: 1   MKDRQRWQPEEDALLRAYVKQYGPKEWNLISQRMGKPLYRDPKSCLERWKNYLKPGLKKG 60
           MK+RQRW  EEDALLRAYV+Q+GP+EW+L+S+RM KPL RD KSCLERWKNYLKPG+KKG
Sbjct: 1   MKERQRWSGEEDALLRAYVRQFGPREWHLVSERMNKPLNRDAKSCLERWKNYLKPGIKKG 60

Query: 61  SLSPEEQTLVISLQAKYGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQLKKLQKAQNLTQR 120
           SL+ EEQ LVI LQ K+GNKWKKIAAEVPGRTAKRLGKWWEVFKEKQ ++ +++    + 
Sbjct: 61  SLTEEEQRLVIRLQEKHGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQQREEKESNKRVEP 120

Query: 121 RDYQNSDGNLSISGVSSPEKALQGPYDHILETFAEKYVQPKLYSAAFQSPPPPPPLANVM 180
            D                    +  YD ILE+FAEK V+ +               +NV+
Sbjct: 121 ID--------------------ESKYDRILESFAEKLVKER---------------SNVV 180

Query: 181 PRLPVPDADPVLS------LGSVNSTTSSSTVLPLWMNVNSTSTASSSTSSTTPSPSVSL 240
           P      A  V++      L S       + V+P W+     +T+++  +     PSV+L
Sbjct: 181 PAAAAA-ATVVMANSNGGFLHSEQQVQPPNPVIPPWL-----ATSNNGNNVVARPPSVTL 240

Query: 241 TLSPS-----------------EP---------VVLDSEMNRLLPVQQ---MGALVLYCK 300
           TLSPS                 +P         +VL S M       +   +  LV  C+
Sbjct: 241 TLSPSTVAAAAPQPPIPWLQQQQPERAENGPGGLVLGSMMPSCSGSSESVFLSELVECCR 300

Query: 301 ELEEGRQIWLQHKKEATWRLTRLEQQLESEKARKKREKMEEMEAKIRRLREEEMAYLGRI 360
           ELEEG + W  HKKEA WRL RLE QLESEK  ++REKMEE+EAK++ LREE+   + +I
Sbjct: 301 ELEEGHRAWADHKKEAAWRLRRLELQLESEKTCRQREKMEEIEAKMKALREEQKNAMEKI 358

Query: 361 ESDYREQVSAMRRDAENKEAKLLEAWCSKHTKLTKLVEQ 365
           E +YREQ+  +RRDAE K+ KL + W S+H +LTK +EQ
Sbjct: 361 EGEYREQLVGLRRDAEAKDQKLADQWTSRHIRLTKFLEQ 358

[Close]

BLAST of CmoCh01G004180 vs. TAIR 10
Match: AT5G52600.1 (myb domain protein 82 )

HSP 1 Score: 100.5 bits (249), Expect = 3.1e-21
Identity = 47/104 (45.19%), Postives = 66/104 (63.46%), Query Frame = 0


Query: 4   RQRWQPEEDALLRAYVKQYGPKEWNLISQRMGKPLYRDPKSCLERWKNYLKPGLKKGSLS 63
           R  W+PEED +L++YV+ +G   W  IS+R G  L R  KSC  RWKNYL+P +K+GS+S
Sbjct: 14  RGLWKPEEDMILKSYVETHGEGNWADISRRSG--LKRGGKSCRLRWKNYLRPNIKRGSMS 73

Query: 64  PEEQTLVISLQAKYGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQ 108
           P+EQ L+I +    GN+W  IA  +PGRT   +  +W     K+
Sbjct: 74  PQEQDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNKK 115

[Close]

BLAST of CmoCh01G004180 vs. TAIR 10
Match: AT1G25340.1 (myb domain protein 116 )

HSP 1 Score: 99.4 bits (246), Expect = 6.8e-21
Identity = 47/110 (42.73%), Postives = 68/110 (61.82%), Query Frame = 0


Query: 7   WQPEEDALLRAYVKQYGPKEWNLISQRMGKPLYRDPKSCLERWKNYLKPGLKKGSLSPEE 66
           W  EED LL  Y+   G   WNL+++  G  L R  KSC  RW NYLKP +K+G+L+P+E
Sbjct: 23  WTLEEDTLLTNYISHNGEGRWNLLAKSSG--LKRAGKSCRLRWLNYLKPDIKRGNLTPQE 82

Query: 67  QTLVISLQAKYGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQLKKLQKAQN 117
           Q L++ L +K+GN+W KI+  +PGRT   +  +W    +KQ ++L    N
Sbjct: 83  QLLILELHSKWGNRWSKISKYLPGRTDNDIKNYWRTRVQKQARQLNIDSN 130

[Close]

BLAST of CmoCh01G004180 vs. TAIR 10
Match: AT1G08810.1 (myb domain protein 60 )

HSP 1 Score: 98.2 bits (243), Expect = 1.5e-20
Identity = 44/104 (42.31%), Postives = 65/104 (62.50%), Query Frame = 0


Query: 7   WQPEEDALLRAYVKQYGPKEWNLISQRMGKPLYRDPKSCLERWKNYLKPGLKKGSLSPEE 66
           W PEED +L +Y++++GP  W  +    G  L R  KSC  RW NYL+PG+K+G+ +P E
Sbjct: 17  WTPEEDIILVSYIQEHGPGNWRSVPTNTG--LLRCSKSCRLRWTNYLRPGIKRGNFTPHE 76

Query: 67  QTLVISLQAKYGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQLKK 111
           + ++I LQA  GNKW  IA+ +P RT   +  +W    +K+L K
Sbjct: 77  EGMIIHLQALLGNKWASIASYLPQRTDNDIKNYWNTHLKKKLNK 118

[Close]

BLAST of CmoCh01G004180 vs. TAIR 10
Match: AT2G26950.1 (myb domain protein 104 )

HSP 1 Score: 98.2 bits (243), Expect = 1.5e-20
Identity = 44/97 (45.36%), Postives = 61/97 (62.89%), Query Frame = 0


Query: 4   RQRWQPEEDALLRAYVKQYGPKEWNLISQRMGKPLYRDPKSCLERWKNYLKPGLKKGSLS 63
           + +W+PEED +L+ YV QYG + W  + +R G P   +P SC  RW N+LKP LKKG  +
Sbjct: 18  KSKWKPEEDRILKDYVIQYGDRTWTHVPKRTGLP--HNPASCRFRWMNHLKPSLKKGPFT 77

Query: 64  PEEQTLVISLQAKYGNKWKKIAAEVPGRTAKRLGKWW 101
            EE+  V+ L A  GNKW ++A E PGRT   +  +W
Sbjct: 78  DEEEKRVLQLHAVLGNKWSQMAREFPGRTDNEIKNFW 112

The following BLAST results are available for this feature:

BLAST of CmoCh01G004180 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O80931	5.0e-77	46.37	Transcription factor AS1 OS=Arabidopsis thaliana OX=3702 GN=AS1 PE=1 SV=1	[more]
Q9S7B2	4.7e-75	46.75	Protein rough sheath 2 OS=Zea mays OX=4577 GN=RS2 PE=1 SV=1	[more]
Q94IB1	1.0e-74	44.66	Protein rough sheath 2 homolog OS=Oryza sativa subsp. japonica OX=39947 GN=RS2 P...	[more]
P81392	3.9e-21	34.27	Myb-related protein 306 OS=Antirrhinum majus OX=4151 GN=MYB306 PE=2 SV=1	[more]
Q10MB4	3.6e-19	39.50	Transcription factor MYB2 OS=Oryza sativa subsp. japonica OX=39947 GN=MYB2 PE=2 ...	[more]

BLAST of CmoCh01G004180 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GCE3	8.8e-210	100.00	protein rough sheath 2 homolog OS=Cucurbita moschata OX=3662 GN=LOC111452685 PE=...	[more]
A0A6J1KCH4	2.2e-205	98.44	protein rough sheath 2 homolog OS=Cucurbita maxima OX=3661 GN=LOC111492624 PE=4 ...	[more]
A0A6J1FAF4	7.3e-180	85.71	protein rough sheath 2 homolog OS=Cucurbita moschata OX=3662 GN=LOC111442290 PE=...	[more]
A0A6J1IZB3	2.1e-179	85.71	protein rough sheath 2 homolog OS=Cucurbita maxima OX=3661 GN=LOC111482044 PE=4 ...	[more]
A0A5D3CNU9	9.6e-148	76.42	Transcription factor AS1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]

BLAST of CmoCh01G004180 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022949284.1	1.8e-209	100.00	protein rough sheath 2 homolog [Cucurbita moschata]	[more]
KAG7036747.1	2.6e-208	99.48	Transcription factor AS1, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023525837.1	2.7e-205	98.70	protein rough sheath 2 homolog [Cucurbita pepo subsp. pepo]	[more]
XP_022997764.1	4.6e-205	98.44	protein rough sheath 2 homolog [Cucurbita maxima]	[more]
KAG6607046.1	5.0e-191	92.99	Transcription factor AS1, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of CmoCh01G004180 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G37630.1	3.6e-78	46.37	myb-like HTH transcriptional regulator family protein	[more]
AT5G52600.1	3.1e-21	45.19	myb domain protein 82	[more]
AT1G25340.1	6.8e-21	42.73	myb domain protein 116	[more]
AT1G08810.1	1.5e-20	42.31	myb domain protein 60	[more]
AT2G26950.1	1.5e-20	45.36	myb domain protein 104	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 278..324
None	No IPR available	COILS	Coil	Coil	coord: 326..346
None	No IPR available	GENE3D	1.10.10.60		coord: 4..58 e-value: 7.5E-18 score: 66.3
None	No IPR available	PFAM	PF13921	Myb_DNA-bind_6	coord: 7..67 e-value: 1.7E-14 score: 53.8
None	No IPR available	GENE3D	1.10.10.60		coord: 62..124 e-value: 8.4E-11 score: 43.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 215..235
None	No IPR available	PANTHER	PTHR47214:SF1	PROTEIN ROUGH SHEATH 2 HOMOLOG	coord: 1..371
None	No IPR available	PANTHER	PTHR47214	PROTEIN ROUGH SHEATH 2 HOMOLOG	coord: 1..371
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 3..55 e-value: 2.4E-14 score: 63.7 coord: 58..106 e-value: 1.8E-9 score: 47.5
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 54..104 score: 7.584305
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 1..53 score: 10.139033
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 63..100 e-value: 3.80909E-6 score: 41.407
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 6..53 e-value: 4.0924E-10 score: 52.963
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 58..108 score: 19.265722
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 1..57 score: 23.083891
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 4..98

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh01G004180.1	CmoCh01G004180.1	mRNA