CmoCh01G003970 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTGCAGCCGCACTGATGATACCCGCCATGATCATGGTTCTGCTACTCAACCCAACTGGATGTGACACTTCCGGTAAGTTTGGAATCACTTTTCGAAAAACAAATTAATTTATAATAATTTTATGAACTCATTGTATCTTCATCGCGACCCAGATGCAAAGCGAAGCCTGGTTGGAGACGAAGACATCGAGTCGGAGTTTCTTATGTCGTTGCACATCAGCCGGGTGTTGGCGGAATCCCAAGGGTTCGAAACCAGCGCCACTAGCAACGCTACCGAACCTGCCGTCGGGGAATGCGACAGGCCGCCACGCTACGACAGCTGCCTTGGCGAGAAAAGAAGTACTCCGCCGCCGGAAAATTGTGGACCCTTCAATCGTGAACATCCCTGTTAG ATGGCTGCAGCCGCACTGATGATACCCGCCATGATCATGGTTCTGCTACTCAACCCAACTGGATGTGACACTTCCGATGCAAAGCGAAGCCTGGTTGGAGACGAAGACATCGAGTCGGAGTTTCTTATGTCGTTGCACATCAGCCGGGTGTTGGCGGAATCCCAAGGGTTCGAAACCAGCGCCACTAGCAACGCTACCGAACCTGCCGTCGGGGAATGCGACAGGCCGCCACGCTACGACAGCTGCCTTGGCGAGAAAAGAAGTACTCCGCCGCCGGAAAATTGTGGACCCTTCAATCGTGAACATCCCTGTTAG ATGGCTGCAGCCGCACTGATGATACCCGCCATGATCATGGTTCTGCTACTCAACCCAACTGGATGTGACACTTCCGATGCAAAGCGAAGCCTGGTTGGAGACGAAGACATCGAGTCGGAGTTTCTTATGTCGTTGCACATCAGCCGGGTGTTGGCGGAATCCCAAGGGTTCGAAACCAGCGCCACTAGCAACGCTACCGAACCTGCCGTCGGGGAATGCGACAGGCCGCCACGCTACGACAGCTGCCTTGGCGAGAAAAGAAGTACTCCGCCGCCGGAAAATTGTGGACCCTTCAATCGTGAACATCCCTGTTAG MAAAALMIPAMIMVLLLNPTGCDTSDAKRSLVGDEDIESEFLMSLHISRVLAESQGFETSATSNATEPAVGECDRPPRYDSCLGEKRSTPPPENCGPFNREHPC Homology
BLAST of CmoCh01G003970 vs. ExPASy TrEMBL
Match: A0A6J1KBP5 (uncharacterized protein LOC111492854 OS=Cucurbita maxima OX=3661 GN=LOC111492854 PE=4 SV=1) HSP 1 Score: 130.6 bits (327), Expect = 3.9e-27 Identity = 69/117 (58.97%), Postives = 85/117 (72.65%), Query Frame = 0
BLAST of CmoCh01G003970 vs. ExPASy TrEMBL
Match: A0A6J1G927 (uncharacterized protein LOC111452044 OS=Cucurbita moschata OX=3662 GN=LOC111452044 PE=4 SV=1) HSP 1 Score: 126.7 bits (317), Expect = 5.6e-26 Identity = 67/117 (57.26%), Postives = 84/117 (71.79%), Query Frame = 0
BLAST of CmoCh01G003970 vs. ExPASy TrEMBL
Match: A0A0A0L711 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G298570 PE=4 SV=1) HSP 1 Score: 124.4 bits (311), Expect = 2.8e-25 Identity = 64/117 (54.70%), Postives = 82/117 (70.09%), Query Frame = 0
BLAST of CmoCh01G003970 vs. ExPASy TrEMBL
Match: A0A6J1CP71 (uncharacterized protein LOC111013278 OS=Momordica charantia OX=3673 GN=LOC111013278 PE=4 SV=1) HSP 1 Score: 121.3 bits (303), Expect = 2.4e-24 Identity = 65/118 (55.08%), Postives = 79/118 (66.95%), Query Frame = 0
BLAST of CmoCh01G003970 vs. ExPASy TrEMBL
Match: A0A0A0LCJ4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G298580 PE=4 SV=1) HSP 1 Score: 116.7 bits (291), Expect = 5.8e-23 Identity = 60/119 (50.42%), Postives = 84/119 (70.59%), Query Frame = 0
BLAST of CmoCh01G003970 vs. NCBI nr
Match: KAG6607028.1 (hypothetical protein SDJN03_00370, partial [Cucurbita argyrosperma subsp. sororia] >KAG7036724.1 hypothetical protein SDJN02_00344 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 203.0 bits (515), Expect = 1.3e-48 Identity = 100/104 (96.15%), Postives = 103/104 (99.04%), Query Frame = 0
BLAST of CmoCh01G003970 vs. NCBI nr
Match: XP_022998105.1 (uncharacterized protein LOC111492854 [Cucurbita maxima]) HSP 1 Score: 130.6 bits (327), Expect = 8.0e-27 Identity = 69/117 (58.97%), Postives = 85/117 (72.65%), Query Frame = 0
BLAST of CmoCh01G003970 vs. NCBI nr
Match: KAG6607029.1 (hypothetical protein SDJN03_00371, partial [Cucurbita argyrosperma subsp. sororia] >KAG7036725.1 hypothetical protein SDJN02_00345, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 127.5 bits (319), Expect = 6.8e-26 Identity = 68/117 (58.12%), Postives = 84/117 (71.79%), Query Frame = 0
BLAST of CmoCh01G003970 vs. NCBI nr
Match: XP_022948338.1 (uncharacterized protein LOC111452044 [Cucurbita moschata]) HSP 1 Score: 126.7 bits (317), Expect = 1.2e-25 Identity = 67/117 (57.26%), Postives = 84/117 (71.79%), Query Frame = 0
BLAST of CmoCh01G003970 vs. NCBI nr
Match: XP_023523220.1 (uncharacterized protein LOC111787479 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 124.8 bits (312), Expect = 4.4e-25 Identity = 67/117 (57.26%), Postives = 81/117 (69.23%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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