CmoCh01G003810 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh01G003810
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	protein PTST, chloroplastic
Location	Cmo_Chr01: 1855188 .. 1861579 (+)
RNA-Seq Expression	CmoCh01G003810
Synteny	CmoCh01G003810

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTCAGAGGGTGATGTTTTAGACCGTGTTTAAAATCGTGAGGGGAGGAAAGTAAAAAAAAAACTCTATTTTGTAAAGATTTGTCGAGTTTTATTGTTTTTGTGTAGAAGCTATAAAATTGATTCAAATGCAGTTAGAACGGGGTCGAGTTTTGAAGAACAAAGACATAATTTGGCTAAATGCAGAGTCAAAATACATATAATATGTCGTCGCAATTGAGCCTAAATGAAACCTAGGGCTACAAAATTACAAAAAAAATATGCTCGGGATTAAAGTTTAAAGGATATTAATGGAAATTTAAAAAGTTTTAATGTATTTACTATTTTTTAGATTTTTTTTTAAAGTTGAAAAAGGATTTTTATACAATTTTTATTAATTAAACTTTTATTTATTAAGGTCATCCGAAACTCTTGGCGATACAATTCATTTTAGACACGGTGTAGAGCTTCGTTTCCGAAAAGATTACAAGAGCTTCTTGGAAGCCATAGCCACTGGATCATCAAAAGCTTCAATTAGGATTCAATTCCGGCTGTACACCCACGGAACTGCAAGCGTTGGGTGAGTTTGATGATTCCAATTTCTTTTCCCGCTCGTTGCCATTTGTTTCTTTCTGGGAATAGTAAATTTCGTTCGTGGCTCTTAACTTTGCTACACACGGAAATGAAATAAATGAGATGATGACAGAAATGGCGATTAATCAGTGTGTAAACGTATTTGGATGCTTTGGAAATGGGTTTAATCGTCGTTTTGGAGTAGTATAATTTGTGAAAATGCTGGTTTTCTTTTTTCTTTTTAATAATTTGATGAGGATTACTCCGATTATCTTGTATAGGTGAATGCTGATATATTTCTCCAGTTTTCTTTGTGTTCAAGAAACAAAATATTGTGAATACATTTGATTTAGTGAGTGATTAGAAATGGTAGGGCCAGATTATTGATATTTGGATGTTGATCAAGCTTGTTGACCTTAAGTTAGCTTTTAGCTAGTTTAGTTATGTAGTAGTGGTTTAACTAGATAGTTTTAGTCAGTTAAGTGTACTGAACTTGGATTCTTTTACAATTGAATATGGATTAATTGTAATTGGGGTTAAAATTCTTTTACAATTGAAAGGAATTGGAGAATTTTTCAAAGAAAAGTACATTCCTTTGTTTGAACGGTTTGAATCCACAAGAATAAAGGCTTCTTGATGGTGATTCTCTTCAAGTCTTTTGCTGAATTGTCATTATTTTGATTATAAGTTTCATTTCTTGTTAAAAAAACACTAGAGAAGAGGGCTAAATACATATGGCTTCCATTTTTTTTTGACAATGAGTCGAATATTCTTTTGAGGAACTCTGTTTTAGCCTTGCTATTCTTTCTATGGCTAGTGGTATGTTTACATTAGAATTTTCATATTTCCTTTGATAGTTTCTGATCTTCATATTCTATATTGATAGGAGGAGCCTACCGATATGGAGATTTATGCCCCAAGGTACAGATTTTTTTCTATCTAAGAAAATTATTGTTATGAACTTCTTTGTATCTTGTTCGCTTGACCTTCAATTATAGACTGCTGACTCTAATTTTTGTGCACCTTCCACAAAAGGTTTGCTGATTATCTCTATATCTAAAACCTGAAGCATGTTATGTATCAACCCCCCTGCAAATGTTGTTTATATTGGTCTTTGAATATGGATGTGATTAATGAAGTTCTCTGTTATGTCTATAATCATTTGCATTATTTGTTAATTCCAAATCATTATCTTCACTATGTTTGAGACTTTTTGCGAACCTGATGTCATTATTACTTATGTTATGATCTTGGTTAGGAGTTGTCTGGAAAAGCAAGTTTTACTGAGTTTCAAGATAGCAAGAAAGTTAAAGAGGGAAAACTTGAATAGCCCTTCATGCAATATTACAACCCGGAGCTTTAGGATGGGTTCTGGCATGTTGATCCATTCTCGTGAACCTTCTGTGATGACACGCCCTCACAGTTATTGGATTCAAAGAAGACATTCATTGCCTGTCACTTCTGAGGAATCTTCAATGCAATCAAAAGATCTTTCCTTAGATGCAGAGGAGATTGAAAGTGCAGAGGAACTTTTGGCTGAACCCCTTAGCAGCGAGCAGGTAAGAGTAGACTAAGTTCAGAATTTAATGCTTTCATGATTAAGAATGATGGATACTGCATTTATAATCTGCTGAATGACAGAGAATGGAATCAGTTACCACCTATTTCTTATTGTTTCCCCTTTAACTGTTTCCCCAGAATCAAAACTTACAATGCTCCCTTTTTCCATAATTTATTATAGCTTTTAATTAATTCTATCCTTGGTGCTGACTTTCTAATGGGGTTTAATGGTGTTTGGGTATTGATGTATCTTTGCCCATTTGTAAATTTGAAGAGTTAGTGATTCTTGTCAGGCTTACATGATTTCCACAAGTATCTTTAAAAAAAAGTTGGGAATAGTACTTTCATTAATCATACGCATTGGAAAATGGAGGTAAAAGAAAATCAGAAGGGTTGCCATGGCTTAGGAATTTAGATAGTGTTTTTGGCAATGTTTCAAGAATGTTAGTGACAGTAGGATACATATTGGGGAAGGATTTGTATTGCGCAATTTGCTTTATCTCAAGTTTACAGGTCAAGTTTTAATATAGTGTAATAAAATTATGGATGCCGTCCTTAGGATTGGTTTTTTTTAGATTACTCAATTACCACAGCAATTGCTGCCCTCTCGGCTCTTGTGGCTTGATTTCTTCCCTTTTTTATTCAATTTTCAAACTTCTGCCCAATTACACCTTTTTCACACTTTTTTTTTTTCCTTCAAATTCTCTTATTTACTCTTAAATGCTCCATTCCTACAAGTTCAACAAATAAATGCGTGAAAATAGCCAATAAATTCTCATAACAAAGTGAAAGTTCACTGTCAATATGAGATGATGGGTTCAAACTTTTGGCCACCTACCTACATTCTCATTGTAATATTGTAGGGTTGGATAAATTTTCTCATGTTATCCCAAACGGGGGGAGGGGAACCCATTTGTAAACAGAAGAACAAAAAAGAAAAAAAAAAAAAAGAAAAAAGAAAAAAAGAAGCTGCAGTGAAGGAATACAAAGATATACTGATTTTGTCTCAATATGAAAAGAATCTTATAGGATATCAATGTGCTATATTTTTCTAATCACTACTTCATGAATAGGTTGTAGTACTATATAAGTCACGATCCTTGTTTCATATGGTAGATTTCAGATGTAAGTAAAGAGTTGATGAAAACAAAACATAATGCATGATTATGTACAATATGAAAGGTGTGTAATAAAGCAAACAAAATTGCATTGGGCATTTATCTAATGCTGAGGCTATTTTCCTTCCATTCTGTAATGTTTCTTTTCAGAAAGTATGATATCCACTTTTCTATCTGTCCAAGTGCTGAATTGGTCTTAATTGACTACAGCTAAATGCATTGTTGGCTAATTCAGAAAGAGAGAGGCTTGTCAAAAGGCTCAGTCATGCTAATCAACAGAACCGACTTCTCAAACGACAGGTGTAAAGACACATGAAATTTTTTATGTTACAAGTATGTTATAGAAAATTTTTACCTTTCATTACACAGATGCATGATCAATTTTCTATTATTATTTATTTTGGTGATCATTTTTTATGTTGACTATATCTTCTCTTGTACTGGTTTTAGATAGATTGTGCAGATTAACTACAAAACCAGAATCAAAATTCTAAAAGTAAATCTACGACCAAGTTAACGTTTAGTTCCTCATCTATGGACAGTATTTGTCTGATTAATGTCTGCAATAATTTAAGCTTTTCAATCAAGTTCATATTGGTGGCACTTTATATCTCACTAGTAAGATCCTTATGCTTCTTCTTTTTTAAAAAACAGAACAAAATAGGATCCTGAAGAGAGCTACAATATCTATCTATCTTTTGTAGTAATGCTCTCATTCTTTCTAGCCAAATTCCCCAAGCAAATGTGTGAGATCCCATATCGGTTGGAGAGGAGAATGAAACATTCCTTATAAGGGTGTGGAAACCTCTCCCTAAAAGACGCGTTTTAAAATTTTGAGGAGAAGCCTGGAAGGAAAAGCCCAAAGAGGACAATATCTGCTAGGGGTGGACTTGGGTGGTTACAAAATACCTTTTATTATAAAAAAGAATACATATACTTACTGTAAATTTGATGTCGACTCTTGGGGAATTTGAGATAGTTGGGGTTTTCTTATTTCCTTGATTCTTGTAAGATATAGTATTGAGGGATATTGAAATTTTAGTGTAGCTAACATATTGGGTATCAGCGAGGGAACGGAAAGTCTAATAATAGTTTTATCTTCTCAGCTGCGTGTACAGGACAATGATTTAGTTAACTTTAAGACCGAACTTGCTGGCTTGGACCACGAAGTTGAGGTTAGGCTTCTTTCTAACCAATTTATAGCCTCCTAGAATTTGACAATAATCATAGAAGTTGTAATCTTCTTTCATGTATGTATTATTATGAGAAGGGTTTGATCAAACTAGCAGAAGAAATAGCACAATCTGGTATTCCAGAAGGTACGAGAAAGATTAATGGGAAATACATTCAATCTCACCTTCTCACAAAACTAAAAGGTATAATGAAGATTCAAAAAGCTTTAATTTCAGCGTTAATGAGTTTTATTACCTTCTTTCTGCACTTGTGTGTGAAATGACGTGTGCTGCCCTCAATGAAAGTTTTCCATCATTACTCAAAAACATATGTTGACTAGTTATTATTTTTCTGGACTTTAAAAGCTGTTCATAAAAAGATAGAGAATCAAATAAAGGATGTGGATTTGGTGCAATCAAAAGAAGTTCAACTATTCTGGTATGGAATGGCTGAGGTAAGAACAGAAAATTCTCATTTGTTTAAACTTTCTTCCTATCTGAAAGGAAACTTGCTTTCTATATTCTAACATTGATTGTTTCCTTCTAATAAAATGCATCAATTTCATTAGGAAAATGAAATATTAAAAATAAAATGAAAAATGAAAAATGAAAAAGGCCAGGCTAATGAAGGCTAATGAAGGCTAATGAAGGTTACAAGAAAGCCTTCCAATAGTTTTGATAATAAAAGATAAAATAACTACGGTTACTCTATGTGTGATTTGAGGTACTTAGAGTCTCTCTATTGAGTTTACTCCAGTATAAACTGTGAGATCTCACATCGGTTGAGAAGGAGAACGAAACATTCTTTATAAGGGTGTGGAAACCTCTCTCTAGCAGACACATTTTAAAAACCATGAGGGAAAATCCAAAGAGGACAATATTTGCTAGTGATGGGATTAGGCTATTACAAATGGTATCAGAGCCAGGCACCAGATGATACGAGGCACTGGTTGGAGTAGGGCTAGACTCTCTCCATAGTAGATGCGTTTTAAAATTGTGAGACTGACAACAATACGTAACGGACCAAAACAGACAATATTTGTTAGCGGTGGGCTTGAGCTATCATACTAACTAATTGCTAATATATTCTCAATGTCTTGATAATATTCTTATTCGTTGCAATTAAGGAGGACTCAACTAGTTATATTCACCTACCAGAAGTTAGATGTTTAAATCTGTTCTTCCACTTACCATTATTGCCTTCATTCTTATTATCTTATCATCGTCTTTGAATAGAGTGTGCAAGTTATGGGAACTTTTGATGGCTGGAGTGTTGGGGAGGACTTATCGCCTGAATACACCGGTGCTTACTCTAAGTTCTCAACAACTTTAAGGCTTAGACCTGGAAGGTATAGTTCTTCTCCACTGCCTTTCTCACCTCCCTTTCATTATTTTATAGAAAATCTTGTTAATTTATTAATAATTTGATTAGTTTTATGACCAGTATTGATATAAATTGATCGACCACGGGAGTCATCGATTAACGGTTAGATTATAAGTGTACTCTTTGAACTCTTAGGTTTATGTCTAAAAAGTACTTGAAAATTTGTCGAATAGGCTCAAGACTTGTTATGCATGAAATTGAGAATTCTTAACGTTTAGTGACTACACAAACACAACTTTGAAAATTCATAGGCTCGTTGGATACAAAATTGCAAGTTTATAGCTTACGTAACGCTTCTTAAAGCTTGTAATTTTACTTTGAGTAACCCATCATGTGTATTATATTTGAAGGTACGAAATCAAGTTCTTAGTGGATGGAGAGTGGCATCTATCACCAGAATTTCCCACTGTTGGCCAAGGCTTGATGGAAAATAACCTGCTAGTTGTGGAATAGGTCTGACGTTAAAAAGACTCATAAATCAAATAATCATGTACTTAAATAAAGGTTGTTACAACATATCATGCACTTCAATGAAGGTCTTTCTCCTTTAATCAACTTTTTCATGATTATGAAATAAAAAACCATGAGATATTATCGAGAGTTAAA

mRNA sequence

ATGGATTCAATTCCGGCTGTACACCCACGGAACTGCAAGCGTTGGGAGGAGCCTACCGATATGGAGATTTATGCCCCAAGGAGTTGTCTGGAAAAGCAAGTTTTACTGAGTTTCAAGATAGCAAGAAAGTTAAAGAGGGAAAACTTGAATAGCCCTTCATGCAATATTACAACCCGGAGCTTTAGGATGGGTTCTGGCATGTTGATCCATTCTCGTGAACCTTCTGTGATGACACGCCCTCACAGTTATTGGATTCAAAGAAGACATTCATTGCCTGTCACTTCTGAGGAATCTTCAATGCAATCAAAAGATCTTTCCTTAGATGCAGAGGAGATTGAAAGTGCAGAGGAACTTTTGGCTGAACCCCTTAGCAGCGAGCAGCTAAATGCATTGTTGGCTAATTCAGAAAGAGAGAGGCTTGTCAAAAGGCTCAGTCATGCTAATCAACAGAACCGACTTCTCAAACGACAGCTGCGTGTACAGGACAATGATTTAGTTAACTTTAAGACCGAACTTGCTGGCTTGGACCACGAAGTTGAGGGTTTGATCAAACTAGCAGAAGAAATAGCACAATCTGGTATTCCAGAAGGTACGAGAAAGATTAATGGGAAATACATTCAATCTCACCTTCTCACAAAACTAAAAGCTGTTCATAAAAAGATAGAGAATCAAATAAAGGATGTGGATTTGGTGCAATCAAAAGAAGTTCAACTATTCTGGTATGGAATGGCTGAGAGTGTGCAAGTTATGGGAACTTTTGATGGCTGGAGTGTTGGGGAGGACTTATCGCCTGAATACACCGGTGCTTACTCTAAGTTCTCAACAACTTTAAGGCTTAGACCTGGAAGGTACGAAATCAAGTTCTTAGTGGATGGAGAGTGGCATCTATCACCAGAATTTCCCACTGTTGGCCAAGGCTTGATGGAAAATAACCTGCTAGTTGTGGAATAGGTCTGACGTTAAAAAGACTCATAAATCAAATAATCATGTACTTAAATAAAGGTTGTTACAACATATCATGCACTTCAATGAAGGTCTTTCTCCTTTAATCAACTTTTTCATGATTATGAAATAAAAAACCATGAGATATTATCGAGAGTTAAA

Coding sequence (CDS)

ATGGATTCAATTCCGGCTGTACACCCACGGAACTGCAAGCGTTGGGAGGAGCCTACCGATATGGAGATTTATGCCCCAAGGAGTTGTCTGGAAAAGCAAGTTTTACTGAGTTTCAAGATAGCAAGAAAGTTAAAGAGGGAAAACTTGAATAGCCCTTCATGCAATATTACAACCCGGAGCTTTAGGATGGGTTCTGGCATGTTGATCCATTCTCGTGAACCTTCTGTGATGACACGCCCTCACAGTTATTGGATTCAAAGAAGACATTCATTGCCTGTCACTTCTGAGGAATCTTCAATGCAATCAAAAGATCTTTCCTTAGATGCAGAGGAGATTGAAAGTGCAGAGGAACTTTTGGCTGAACCCCTTAGCAGCGAGCAGCTAAATGCATTGTTGGCTAATTCAGAAAGAGAGAGGCTTGTCAAAAGGCTCAGTCATGCTAATCAACAGAACCGACTTCTCAAACGACAGCTGCGTGTACAGGACAATGATTTAGTTAACTTTAAGACCGAACTTGCTGGCTTGGACCACGAAGTTGAGGGTTTGATCAAACTAGCAGAAGAAATAGCACAATCTGGTATTCCAGAAGGTACGAGAAAGATTAATGGGAAATACATTCAATCTCACCTTCTCACAAAACTAAAAGCTGTTCATAAAAAGATAGAGAATCAAATAAAGGATGTGGATTTGGTGCAATCAAAAGAAGTTCAACTATTCTGGTATGGAATGGCTGAGAGTGTGCAAGTTATGGGAACTTTTGATGGCTGGAGTGTTGGGGAGGACTTATCGCCTGAATACACCGGTGCTTACTCTAAGTTCTCAACAACTTTAAGGCTTAGACCTGGAAGGTACGAAATCAAGTTCTTAGTGGATGGAGAGTGGCATCTATCACCAGAATTTCCCACTGTTGGCCAAGGCTTGATGGAAAATAACCTGCTAGTTGTGGAATAG

Protein sequence

MDSIPAVHPRNCKRWEEPTDMEIYAPRSCLEKQVLLSFKIARKLKRENLNSPSCNITTRSFRMGSGMLIHSREPSVMTRPHSYWIQRRHSLPVTSEESSMQSKDLSLDAEEIESAEELLAEPLSSEQLNALLANSERERLVKRLSHANQQNRLLKRQLRVQDNDLVNFKTELAGLDHEVEGLIKLAEEIAQSGIPEGTRKINGKYIQSHLLTKLKAVHKKIENQIKDVDLVQSKEVQLFWYGMAESVQVMGTFDGWSVGEDLSPEYTGAYSKFSTTLRLRPGRYEIKFLVDGEWHLSPEFPTVGQGLMENNLLVVE

Homology

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BLAST of CmoCh01G003810 vs. ExPASy Swiss-Prot
Match: Q94AX2 (Protein PTST, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PTST PE=1 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 1.2e-73
Identity = 147/241 (61.00%), Postives = 190/241 (78.84%), Query Frame = 0


Query: 78  TRPH--SYWIQRRHSLPVTSEESSMQSKDLSLDAEEIESAEELLAEPLSSEQLNALLANS 137
           TR H  +  + +R  + V +EESS+ S+DL          +E L+ PL+S++L +LL ++
Sbjct: 47  TRKHYKNSLLLKRFLVGVGTEESSL-SEDL---------LDESLSRPLTSDELKSLLIDT 106

Query: 138 ERERLVKRLSHANQQNRLLKRQLRVQDNDLVNFKTELAGLDHEVEGLIKLAEEIAQSGIP 197
           ER +LVK+LS ANQQNR LKRQL+ Q++++ N KTELA ++ EV+ L+KLAEEIA  GIP
Sbjct: 107 ERSKLVKKLSEANQQNRFLKRQLKTQEHEITNIKTELALMELEVQALVKLAEEIANLGIP 166

Query: 198 EGTRKINGKYIQSHLLTKLKAVHKKIENQIKDVDLVQSKEVQLFWYGMAESVQVMGTFDG 257
           +G+RKI+GKYIQSHLL++L AV KK++ QIK V+  QSKEV +FW GMAESVQVMG+FDG
Sbjct: 167 QGSRKISGKYIQSHLLSRLDAVQKKMKEQIKGVEAAQSKEVHVFWIGMAESVQVMGSFDG 226

Query: 258 WSVGEDLSPEYTGAYSKFSTTLRLRPGRYEIKFLVDGEWHLSPEFPTVGQGLMENNLLVV 317
           WS  EDLSPEY+  ++KFSTTL LRPGRYE+KFLVDGEW +SPEFPT G+GLMENN+LVV
Sbjct: 227 WSQREDLSPEYSALFTKFSTTLFLRPGRYEMKFLVDGEWQISPEFPTSGEGLMENNVLVV 277

[Close]

BLAST of CmoCh01G003810 vs. ExPASy Swiss-Prot
Match: Q10F03 (Protein FLOURY ENDOSPERM 6, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=FLO6 PE=1 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 3.9e-11
Identity = 47/136 (34.56%), Postives = 64/136 (47.06%), Query Frame = 0


Query: 187 EEIAQSGIPEGTRKINGK--YIQSHLLTKLKAVHKKIENQIKDVD-----LVQSKEVQLF 246
           EE       E  R I  K   ++  +  ++   +K IE + + +D     L + + V + 
Sbjct: 396 EETKVMQAQEELRSIRAKIAVLEGKMALEIIEKNKIIEEKQRRLDEAEKALSELRTVYIV 455

Query: 247 WYGMAESVQVMGTFDGWSVGEDLSPEYTGAYSKFSTTLRLRPGRYEIKFLVDGEWHLSPE 306
           W   A  V + G+FDGW+    +     G    FS  LRL PGRYEIKF+VDG W   P 
Sbjct: 456 WSNPASEVLLTGSFDGWTSQRRMERSERGT---FSLNLRLYPGRYEIKFIVDGVWRNDPL 515

Query: 307 FPTVGQGLMENNLLVV 316
            P V     ENNLL V
Sbjct: 516 RPLVSNNGHENNLLTV 528

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BLAST of CmoCh01G003810 vs. ExPASy Swiss-Prot
Match: Q9LFY0 (Protein PTST homolog 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PTST2 PE=1 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 1.6e-09
Identity = 58/225 (25.78%), Postives = 104/225 (46.22%), Query Frame = 0


Query: 98  SSMQSKDLSLDAEEIESAEELLAEPLSSEQLNALLANSERERLVKRLSHANQQNR----- 157
           + ++  D   D+ +  + ++ +A   SSE +N        ++L   LS      R     
Sbjct: 318 TGVKKDDTKKDSGDSMNGKDRIAS--SSEDVNKTHIKHRLQQLQSELSSVLHSLRSPPDK 377

Query: 158 -LLKRQLRVQDNDLVNFKTELAGLDHE-VEGLIKLAEEIAQSGIPEGTRKINGKYIQSHL 217
            +  +       +L N   +    ++E +    KL    A+  + EG  K+    I +  
Sbjct: 378 VVTSKDSETTAGNLENLSDDWEYKENEIIHAQNKLRSTRAKLAVLEG--KMAMAIIDAQR 437

Query: 218 LTKLKAVHKKIENQIKDVDLVQSKEVQLFWYGMAESVQVMGTFDGWSVGEDLSPEYTGAY 277
           + + K   ++I++  + + L+++    + W   A  V + G+FDGWS    +     G  
Sbjct: 438 IVREK--QRRIDHASRALRLLRT--ASIVWPNSASEVLLTGSFDGWSTQRKMKKAENGV- 497

Query: 278 SKFSTTLRLRPGRYEIKFLVDGEWHLSPEFPTVGQGLMENNLLVV 316
             FS +L+L PG+YEIKF+VDG+W + P  P V  G  ENNLL++
Sbjct: 498 --FSLSLKLYPGKYEIKFIVDGQWKVDPLRPIVTSGGYENNLLII 531

[Close]

BLAST of CmoCh01G003810 vs. ExPASy Swiss-Prot
Match: F4KFB3 (Protein PTST homolog 3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PTST PE=1 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 2.2e-09
Identity = 59/207 (28.50%), Postives = 105/207 (50.72%), Query Frame = 0


Query: 119 LAEPLSSEQLNALLANS-ERERLVKRLSHANQQNRLLKRQLRVQDNDLVNFKTELAGLDH 178
           L E + + ++N+   NS +R+  V   +  + + R  + Q+ +   D + F      LD 
Sbjct: 405 LKEIIHATEVNSSDRNSDQRDGSVGLDTDPHHETRKRENQVEI---DRLRFM-----LDQ 464

Query: 179 EVEGLIKLAEEIAQSGIPEGTRKINGKYIQSHLLTKLKAV-----HKKIENQIKDVDLVQ 238
           +   L +L E+I +        K++   +Q    T+++        K++E Q  +  L  
Sbjct: 465 KELELSRLKEQIEK-------EKLSLSVLQRQAETEIQKAQMLISEKEVELQEAEESLSG 524

Query: 239 SKEVQLFWYGMAESVQVMGTFDGWS--VGEDL-SPEYTGAYSKFSTTLRLRPGRYEIKFL 298
            +EV + + G   +V+V G+F+GW   VG +L + +  G    +ST L L PG YEIKF+
Sbjct: 525 LQEVVIEYCGDGNAVEVTGSFNGWQHRVGMELQASKSIGKQKCWSTLLWLYPGTYEIKFI 584

Query: 299 VDGEWHLSPEFPTVGQGLMENNLLVVE 317
           VDG+W   P+  +V +G + NN+L V+
Sbjct: 585 VDGQWITDPQKDSVTRGHISNNILKVD 596

[Close]

BLAST of CmoCh01G003810 vs. ExPASy Swiss-Prot
Match: P80387 (5'-AMP-activated protein kinase subunit beta-1 (Fragment) OS=Sus scrofa OX=9823 GN=PRKAB1 PE=1 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 9.4e-05
Identity = 28/94 (29.79%), Postives = 45/94 (47.87%), Query Frame = 0


Query: 224 QIKDVDLVQSKEVQLFWYGMAESVQVMGTFDGWSVGEDLSPEYTGAYSKFSTTLRLRPGR 283
           ++ D    Q++     W G  + V + G+F+ WS         T +++ F   L L  G 
Sbjct: 33  EVNDKASAQARPTVFRWTGGGKEVYLSGSFNNWS-----KLPLTRSHNNFVAILDLPEGE 92

Query: 284 YEIKFLVDGEWHLSPEFPTVGQGL-MENNLLVVE 317
           ++ KFLVDG+W   P  P V   L   NN++ V+
Sbjct: 93  HQYKFLVDGQWTHDPSEPVVTSQLGTVNNIIQVK 121

[Close]

BLAST of CmoCh01G003810 vs. ExPASy TrEMBL
Match: A0A6J1G9H0 (protein PTST, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111452163 PE=4 SV=1)

HSP 1 Score: 575.9 bits (1483), Expect = 1.1e-160
Identity = 296/296 (100.00%), Postives = 296/296 (100.00%), Query Frame = 0


Query: 21  MEIYAPRSCLEKQVLLSFKIARKLKRENLNSPSCNITTRSFRMGSGMLIHSREPSVMTRP 80
           MEIYAPRSCLEKQVLLSFKIARKLKRENLNSPSCNITTRSFRMGSGMLIHSREPSVMTRP
Sbjct: 1   MEIYAPRSCLEKQVLLSFKIARKLKRENLNSPSCNITTRSFRMGSGMLIHSREPSVMTRP 60

Query: 81  HSYWIQRRHSLPVTSEESSMQSKDLSLDAEEIESAEELLAEPLSSEQLNALLANSERERL 140
           HSYWIQRRHSLPVTSEESSMQSKDLSLDAEEIESAEELLAEPLSSEQLNALLANSERERL
Sbjct: 61  HSYWIQRRHSLPVTSEESSMQSKDLSLDAEEIESAEELLAEPLSSEQLNALLANSERERL 120

Query: 141 VKRLSHANQQNRLLKRQLRVQDNDLVNFKTELAGLDHEVEGLIKLAEEIAQSGIPEGTRK 200
           VKRLSHANQQNRLLKRQLRVQDNDLVNFKTELAGLDHEVEGLIKLAEEIAQSGIPEGTRK
Sbjct: 121 VKRLSHANQQNRLLKRQLRVQDNDLVNFKTELAGLDHEVEGLIKLAEEIAQSGIPEGTRK 180

Query: 201 INGKYIQSHLLTKLKAVHKKIENQIKDVDLVQSKEVQLFWYGMAESVQVMGTFDGWSVGE 260
           INGKYIQSHLLTKLKAVHKKIENQIKDVDLVQSKEVQLFWYGMAESVQVMGTFDGWSVGE
Sbjct: 181 INGKYIQSHLLTKLKAVHKKIENQIKDVDLVQSKEVQLFWYGMAESVQVMGTFDGWSVGE 240

Query: 261 DLSPEYTGAYSKFSTTLRLRPGRYEIKFLVDGEWHLSPEFPTVGQGLMENNLLVVE 317
           DLSPEYTGAYSKFSTTLRLRPGRYEIKFLVDGEWHLSPEFPTVGQGLMENNLLVVE
Sbjct: 241 DLSPEYTGAYSKFSTTLRLRPGRYEIKFLVDGEWHLSPEFPTVGQGLMENNLLVVE 296

[Close]

BLAST of CmoCh01G003810 vs. ExPASy TrEMBL
Match: A0A6J1K8Q8 (protein PTST, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111493294 PE=4 SV=1)

HSP 1 Score: 562.4 bits (1448), Expect = 1.2e-156
Identity = 291/296 (98.31%), Postives = 291/296 (98.31%), Query Frame = 0


Query: 21  MEIYAPRSCLEKQVLLSFKIARKLKRENLNSPSCNITTRSFRMGSGMLIHSREPSVMTRP 80
           MEIYAP SCLEKQVLLSFKIARKLKRENLNSPSCNITTRSFRMGSGMLIHSREPSVMTRP
Sbjct: 1   MEIYAPWSCLEKQVLLSFKIARKLKRENLNSPSCNITTRSFRMGSGMLIHSREPSVMTRP 60

Query: 81  HSYWIQRRHSLPVTSEESSMQSKDLSLDAEEIESAEELLAEPLSSEQLNALLANSERERL 140
            SYWIQRRHSLPVTSEESSMQSKDLSLD EEIESAEELLAEPLSSEQLNALLANSERERL
Sbjct: 61  QSYWIQRRHSLPVTSEESSMQSKDLSLDVEEIESAEELLAEPLSSEQLNALLANSERERL 120

Query: 141 VKRLSHANQQNRLLKRQLRVQDNDLVNFKTELAGLDHEVEGLIKLAEEIAQSGIPEGTRK 200
           VKRLSHANQQNRLLKRQLRVQDNDLVNFKTELA LDHEVEGLIKLAEEIAQSGIPEGTRK
Sbjct: 121 VKRLSHANQQNRLLKRQLRVQDNDLVNFKTELAVLDHEVEGLIKLAEEIAQSGIPEGTRK 180

Query: 201 INGKYIQSHLLTKLKAVHKKIENQIKDVDLVQSKEVQLFWYGMAESVQVMGTFDGWSVGE 260
           INGKYIQSHLLTKLKAVHKKIENQIKDVDLVQSKEV LFWYGMAESVQVMGTFDGWSVGE
Sbjct: 181 INGKYIQSHLLTKLKAVHKKIENQIKDVDLVQSKEVPLFWYGMAESVQVMGTFDGWSVGE 240

Query: 261 DLSPEYTGAYSKFSTTLRLRPGRYEIKFLVDGEWHLSPEFPTVGQGLMENNLLVVE 317
           DLSPEYTGAYSKFSTTLRLRPGRYEIKFLVDGEWHLSPEFPTVGQGLMENNLLVVE
Sbjct: 241 DLSPEYTGAYSKFSTTLRLRPGRYEIKFLVDGEWHLSPEFPTVGQGLMENNLLVVE 296

[Close]

BLAST of CmoCh01G003810 vs. ExPASy TrEMBL
Match: A0A5D3BTZ2 (Protein PTST OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold451G001330 PE=4 SV=1)

HSP 1 Score: 476.1 bits (1224), Expect = 1.1e-130
Identity = 249/296 (84.12%), Postives = 267/296 (90.20%), Query Frame = 0


Query: 21  MEIYAPRSCLEKQVLLSFKIARKLKRENLNSPSCNITTRSFRMGSGMLIHSREPSVMTRP 80
           MEI APR+CL+  VLLS K ARKLKRENLN+PSCN+ T SFR GS  LIHS EPSV  RP
Sbjct: 1   MEICAPRTCLDNLVLLSSKKARKLKRENLNNPSCNMATWSFRTGSCKLIHSHEPSVTIRP 60

Query: 81  HSYWIQRRHSLPVTSEESSMQSKDLSLDAEEIESAEELLAEPLSSEQLNALLANSERERL 140
            SY I +R+SLPVTSEESSMQS+DLS   EEI S EELLA+PLSSEQLNALLA+SER+RL
Sbjct: 61  QSYQILKRYSLPVTSEESSMQSEDLSTHEEEIVSGEELLAQPLSSEQLNALLADSERDRL 120

Query: 141 VKRLSHANQQNRLLKRQLRVQDNDLVNFKTELAGLDHEVEGLIKLAEEIAQSGIPEGTRK 200
           VK+LSHANQQNRLLKRQL V+D DLVN KTELA LDHE++GLIKLAEEIAQSGIPE TRK
Sbjct: 121 VKKLSHANQQNRLLKRQLHVKDEDLVNCKTELAALDHEIQGLIKLAEEIAQSGIPERTRK 180

Query: 201 INGKYIQSHLLTKLKAVHKKIENQIKDVDLVQSKEVQLFWYGMAESVQVMGTFDGWSVGE 260
           INGKYIQSHLLTKL+AVHKKI +QIKDVDLVQSKEV LFWYGMAE+VQVMGTFDGWSVGE
Sbjct: 181 INGKYIQSHLLTKLEAVHKKIVDQIKDVDLVQSKEVPLFWYGMAENVQVMGTFDGWSVGE 240

Query: 261 DLSPEYTGAYSKFSTTLRLRPGRYEIKFLVDGEWHLSPEFPTVGQGLMENNLLVVE 317
           DLSPEYTGAYSKFSTTLRLRPGRYEIKFLVDGEW LSPEFPTVG+GLMENNLLVVE
Sbjct: 241 DLSPEYTGAYSKFSTTLRLRPGRYEIKFLVDGEWQLSPEFPTVGEGLMENNLLVVE 296

[Close]

BLAST of CmoCh01G003810 vs. ExPASy TrEMBL
Match: A0A1S3C4P6 (protein PTST, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC103496819 PE=4 SV=1)

HSP 1 Score: 476.1 bits (1224), Expect = 1.1e-130
Identity = 249/296 (84.12%), Postives = 267/296 (90.20%), Query Frame = 0


Query: 21  MEIYAPRSCLEKQVLLSFKIARKLKRENLNSPSCNITTRSFRMGSGMLIHSREPSVMTRP 80
           MEI APR+CL+  VLLS K ARKLKRENLN+PSCN+ T SFR GS  LIHS EPSV  RP
Sbjct: 1   MEICAPRTCLDNLVLLSSKKARKLKRENLNNPSCNMATWSFRTGSCKLIHSHEPSVTIRP 60

Query: 81  HSYWIQRRHSLPVTSEESSMQSKDLSLDAEEIESAEELLAEPLSSEQLNALLANSERERL 140
            SY I +R+SLPVTSEESSMQS+DLS   EEI S EELLA+PLSSEQLNALLA+SER+RL
Sbjct: 61  QSYQILKRYSLPVTSEESSMQSEDLSTHEEEIVSGEELLAQPLSSEQLNALLADSERDRL 120

Query: 141 VKRLSHANQQNRLLKRQLRVQDNDLVNFKTELAGLDHEVEGLIKLAEEIAQSGIPEGTRK 200
           VK+LSHANQQNRLLKRQL V+D DLVN KTELA LDHE++GLIKLAEEIAQSGIPE TRK
Sbjct: 121 VKKLSHANQQNRLLKRQLHVKDEDLVNCKTELAALDHEIQGLIKLAEEIAQSGIPERTRK 180

Query: 201 INGKYIQSHLLTKLKAVHKKIENQIKDVDLVQSKEVQLFWYGMAESVQVMGTFDGWSVGE 260
           INGKYIQSHLLTKL+AVHKKI +QIKDVDLVQSKEV LFWYGMAE+VQVMGTFDGWSVGE
Sbjct: 181 INGKYIQSHLLTKLEAVHKKIVDQIKDVDLVQSKEVPLFWYGMAENVQVMGTFDGWSVGE 240

Query: 261 DLSPEYTGAYSKFSTTLRLRPGRYEIKFLVDGEWHLSPEFPTVGQGLMENNLLVVE 317
           DLSPEYTGAYSKFSTTLRLRPGRYEIKFLVDGEW LSPEFPTVG+GLMENNLLVVE
Sbjct: 241 DLSPEYTGAYSKFSTTLRLRPGRYEIKFLVDGEWQLSPEFPTVGEGLMENNLLVVE 296

[Close]

BLAST of CmoCh01G003810 vs. ExPASy TrEMBL
Match: A0A6J1CNQ5 (protein PTST, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111013285 PE=4 SV=1)

HSP 1 Score: 436.4 bits (1121), Expect = 1.0e-118
Identity = 230/297 (77.44%), Postives = 257/297 (86.53%), Query Frame = 0


Query: 21  MEIYAPRSCLEKQVLLSFKIARKLKRENLNSPSCNITTRSFRMGSGMLIHSREPSVMTRP 80
           MEI APR+CL+KQV LS + A KLKREN NS SCN+   SFRM S  L+H   PSVM  P
Sbjct: 1   MEICAPRTCLDKQVSLSSQNAIKLKRENTNSLSCNMAAWSFRMDSFKLVHFYAPSVMRYP 60

Query: 81  HSYWIQRRHSLPVTSEESSMQSKDLSLDA-EEIESAEELLAEPLSSEQLNALLANSERER 140
            +    RR+SLPVTSEESSMQS+D + D  EEI S EELLA+PLSSEQLNALLA+SERE+
Sbjct: 61  QNRRSHRRYSLPVTSEESSMQSEDPATDVEEEIVSTEELLAQPLSSEQLNALLADSEREK 120

Query: 141 LVKRLSHANQQNRLLKRQLRVQDNDLVNFKTELAGLDHEVEGLIKLAEEIAQSGIPEGTR 200
           LVK+LSHANQQNRLLKRQL V+D+DLV  KTELA L+HE + LIKLAEEIAQSGIPEG+R
Sbjct: 121 LVKKLSHANQQNRLLKRQLHVKDDDLVKLKTELAALEHEFQVLIKLAEEIAQSGIPEGSR 180

Query: 201 KINGKYIQSHLLTKLKAVHKKIENQIKDVDLVQSKEVQLFWYGMAESVQVMGTFDGWSVG 260
           KINGKYIQSHLLTKL+ VHKKIE+QIKDV LVQSKE+ LFWYGMAESVQVMG+FDGWS+G
Sbjct: 181 KINGKYIQSHLLTKLEGVHKKIEDQIKDVHLVQSKEISLFWYGMAESVQVMGSFDGWSIG 240

Query: 261 EDLSPEYTGAYSKFSTTLRLRPGRYEIKFLVDGEWHLSPEFPTVGQGLMENNLLVVE 317
           EDLSPEY+GAYSKFSTTL+LRPGRYEIKFLVDGEW LSP+FPT+G GLMENNLLVVE
Sbjct: 241 EDLSPEYSGAYSKFSTTLKLRPGRYEIKFLVDGEWQLSPQFPTIGDGLMENNLLVVE 297

[Close]

BLAST of CmoCh01G003810 vs. NCBI nr
Match: KAG6607014.1 (Protein PTST, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 613.2 bits (1580), Expect = 1.2e-171
Identity = 313/315 (99.37%), Postives = 313/315 (99.37%), Query Frame = 0


Query: 2   DSIPAVHPRNCKRWEEPTDMEIYAPRSCLEKQVLLSFKIARKLKRENLNSPSCNITTRSF 61
           DSIPAVHPRNCKR EEPTDMEIYAPRSCLEKQVLLSFKIARKLKRENLNSPSCNITTRSF
Sbjct: 87  DSIPAVHPRNCKRLEEPTDMEIYAPRSCLEKQVLLSFKIARKLKRENLNSPSCNITTRSF 146

Query: 62  RMGSGMLIHSREPSVMTRPHSYWIQRRHSLPVTSEESSMQSKDLSLDAEEIESAEELLAE 121
           RMGSGMLIHSREPSVMTRPHSYWIQRRHSLPVTSEESSMQ KDLSLDAEEIESAEELLAE
Sbjct: 147 RMGSGMLIHSREPSVMTRPHSYWIQRRHSLPVTSEESSMQPKDLSLDAEEIESAEELLAE 206

Query: 122 PLSSEQLNALLANSERERLVKRLSHANQQNRLLKRQLRVQDNDLVNFKTELAGLDHEVEG 181
           PLSSEQLNALLANSERERLVKRLSHANQQNRLLKRQLRVQDNDLVNFKTELAGLDHEVEG
Sbjct: 207 PLSSEQLNALLANSERERLVKRLSHANQQNRLLKRQLRVQDNDLVNFKTELAGLDHEVEG 266

Query: 182 LIKLAEEIAQSGIPEGTRKINGKYIQSHLLTKLKAVHKKIENQIKDVDLVQSKEVQLFWY 241
           LIKLAEEIAQSGIPEGTRKINGKYIQSHLLTKLKAVHKKIENQIKDVDLVQSKEVQLFWY
Sbjct: 267 LIKLAEEIAQSGIPEGTRKINGKYIQSHLLTKLKAVHKKIENQIKDVDLVQSKEVQLFWY 326

Query: 242 GMAESVQVMGTFDGWSVGEDLSPEYTGAYSKFSTTLRLRPGRYEIKFLVDGEWHLSPEFP 301
           GMAESVQVMGTFDGWSVGEDLSPEYTGAYSKFSTTLRLRPGRYEIKFLVDGEWHLSPEFP
Sbjct: 327 GMAESVQVMGTFDGWSVGEDLSPEYTGAYSKFSTTLRLRPGRYEIKFLVDGEWHLSPEFP 386

Query: 302 TVGQGLMENNLLVVE 317
           TVGQGLMENNLLVVE
Sbjct: 387 TVGQGLMENNLLVVE 401

[Close]

BLAST of CmoCh01G003810 vs. NCBI nr
Match: XP_022948503.1 (protein PTST, chloroplastic [Cucurbita moschata] >XP_022948504.1 protein PTST, chloroplastic [Cucurbita moschata])

HSP 1 Score: 575.9 bits (1483), Expect = 2.2e-160
Identity = 296/296 (100.00%), Postives = 296/296 (100.00%), Query Frame = 0


Query: 21  MEIYAPRSCLEKQVLLSFKIARKLKRENLNSPSCNITTRSFRMGSGMLIHSREPSVMTRP 80
           MEIYAPRSCLEKQVLLSFKIARKLKRENLNSPSCNITTRSFRMGSGMLIHSREPSVMTRP
Sbjct: 1   MEIYAPRSCLEKQVLLSFKIARKLKRENLNSPSCNITTRSFRMGSGMLIHSREPSVMTRP 60

Query: 81  HSYWIQRRHSLPVTSEESSMQSKDLSLDAEEIESAEELLAEPLSSEQLNALLANSERERL 140
           HSYWIQRRHSLPVTSEESSMQSKDLSLDAEEIESAEELLAEPLSSEQLNALLANSERERL
Sbjct: 61  HSYWIQRRHSLPVTSEESSMQSKDLSLDAEEIESAEELLAEPLSSEQLNALLANSERERL 120

Query: 141 VKRLSHANQQNRLLKRQLRVQDNDLVNFKTELAGLDHEVEGLIKLAEEIAQSGIPEGTRK 200
           VKRLSHANQQNRLLKRQLRVQDNDLVNFKTELAGLDHEVEGLIKLAEEIAQSGIPEGTRK
Sbjct: 121 VKRLSHANQQNRLLKRQLRVQDNDLVNFKTELAGLDHEVEGLIKLAEEIAQSGIPEGTRK 180

Query: 201 INGKYIQSHLLTKLKAVHKKIENQIKDVDLVQSKEVQLFWYGMAESVQVMGTFDGWSVGE 260
           INGKYIQSHLLTKLKAVHKKIENQIKDVDLVQSKEVQLFWYGMAESVQVMGTFDGWSVGE
Sbjct: 181 INGKYIQSHLLTKLKAVHKKIENQIKDVDLVQSKEVQLFWYGMAESVQVMGTFDGWSVGE 240

Query: 261 DLSPEYTGAYSKFSTTLRLRPGRYEIKFLVDGEWHLSPEFPTVGQGLMENNLLVVE 317
           DLSPEYTGAYSKFSTTLRLRPGRYEIKFLVDGEWHLSPEFPTVGQGLMENNLLVVE
Sbjct: 241 DLSPEYTGAYSKFSTTLRLRPGRYEIKFLVDGEWHLSPEFPTVGQGLMENNLLVVE 296

[Close]

BLAST of CmoCh01G003810 vs. NCBI nr
Match: KAG7036711.1 (Protein PTST, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 573.9 bits (1478), Expect = 8.3e-160
Identity = 295/296 (99.66%), Postives = 295/296 (99.66%), Query Frame = 0


Query: 21  MEIYAPRSCLEKQVLLSFKIARKLKRENLNSPSCNITTRSFRMGSGMLIHSREPSVMTRP 80
           MEIYAPRSCLEKQVLLSFKIARKLKRENLNSPSCNITTRSFRMGSGMLIHSREPSVMTRP
Sbjct: 1   MEIYAPRSCLEKQVLLSFKIARKLKRENLNSPSCNITTRSFRMGSGMLIHSREPSVMTRP 60

Query: 81  HSYWIQRRHSLPVTSEESSMQSKDLSLDAEEIESAEELLAEPLSSEQLNALLANSERERL 140
           HSYWIQRRHSLPVTSEESSMQ KDLSLDAEEIESAEELLAEPLSSEQLNALLANSERERL
Sbjct: 61  HSYWIQRRHSLPVTSEESSMQPKDLSLDAEEIESAEELLAEPLSSEQLNALLANSERERL 120

Query: 141 VKRLSHANQQNRLLKRQLRVQDNDLVNFKTELAGLDHEVEGLIKLAEEIAQSGIPEGTRK 200
           VKRLSHANQQNRLLKRQLRVQDNDLVNFKTELAGLDHEVEGLIKLAEEIAQSGIPEGTRK
Sbjct: 121 VKRLSHANQQNRLLKRQLRVQDNDLVNFKTELAGLDHEVEGLIKLAEEIAQSGIPEGTRK 180

Query: 201 INGKYIQSHLLTKLKAVHKKIENQIKDVDLVQSKEVQLFWYGMAESVQVMGTFDGWSVGE 260
           INGKYIQSHLLTKLKAVHKKIENQIKDVDLVQSKEVQLFWYGMAESVQVMGTFDGWSVGE
Sbjct: 181 INGKYIQSHLLTKLKAVHKKIENQIKDVDLVQSKEVQLFWYGMAESVQVMGTFDGWSVGE 240

Query: 261 DLSPEYTGAYSKFSTTLRLRPGRYEIKFLVDGEWHLSPEFPTVGQGLMENNLLVVE 317
           DLSPEYTGAYSKFSTTLRLRPGRYEIKFLVDGEWHLSPEFPTVGQGLMENNLLVVE
Sbjct: 241 DLSPEYTGAYSKFSTTLRLRPGRYEIKFLVDGEWHLSPEFPTVGQGLMENNLLVVE 296

[Close]

BLAST of CmoCh01G003810 vs. NCBI nr
Match: XP_022998711.1 (protein PTST, chloroplastic [Cucurbita maxima] >XP_022998712.1 protein PTST, chloroplastic [Cucurbita maxima])

HSP 1 Score: 562.4 bits (1448), Expect = 2.5e-156
Identity = 291/296 (98.31%), Postives = 291/296 (98.31%), Query Frame = 0


Query: 21  MEIYAPRSCLEKQVLLSFKIARKLKRENLNSPSCNITTRSFRMGSGMLIHSREPSVMTRP 80
           MEIYAP SCLEKQVLLSFKIARKLKRENLNSPSCNITTRSFRMGSGMLIHSREPSVMTRP
Sbjct: 1   MEIYAPWSCLEKQVLLSFKIARKLKRENLNSPSCNITTRSFRMGSGMLIHSREPSVMTRP 60

Query: 81  HSYWIQRRHSLPVTSEESSMQSKDLSLDAEEIESAEELLAEPLSSEQLNALLANSERERL 140
            SYWIQRRHSLPVTSEESSMQSKDLSLD EEIESAEELLAEPLSSEQLNALLANSERERL
Sbjct: 61  QSYWIQRRHSLPVTSEESSMQSKDLSLDVEEIESAEELLAEPLSSEQLNALLANSERERL 120

Query: 141 VKRLSHANQQNRLLKRQLRVQDNDLVNFKTELAGLDHEVEGLIKLAEEIAQSGIPEGTRK 200
           VKRLSHANQQNRLLKRQLRVQDNDLVNFKTELA LDHEVEGLIKLAEEIAQSGIPEGTRK
Sbjct: 121 VKRLSHANQQNRLLKRQLRVQDNDLVNFKTELAVLDHEVEGLIKLAEEIAQSGIPEGTRK 180

Query: 201 INGKYIQSHLLTKLKAVHKKIENQIKDVDLVQSKEVQLFWYGMAESVQVMGTFDGWSVGE 260
           INGKYIQSHLLTKLKAVHKKIENQIKDVDLVQSKEV LFWYGMAESVQVMGTFDGWSVGE
Sbjct: 181 INGKYIQSHLLTKLKAVHKKIENQIKDVDLVQSKEVPLFWYGMAESVQVMGTFDGWSVGE 240

Query: 261 DLSPEYTGAYSKFSTTLRLRPGRYEIKFLVDGEWHLSPEFPTVGQGLMENNLLVVE 317
           DLSPEYTGAYSKFSTTLRLRPGRYEIKFLVDGEWHLSPEFPTVGQGLMENNLLVVE
Sbjct: 241 DLSPEYTGAYSKFSTTLRLRPGRYEIKFLVDGEWHLSPEFPTVGQGLMENNLLVVE 296

[Close]

BLAST of CmoCh01G003810 vs. NCBI nr
Match: XP_023524701.1 (protein PTST, chloroplastic [Cucurbita pepo subsp. pepo] >XP_023524702.1 protein PTST, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 561.2 bits (1445), Expect = 5.6e-156
Identity = 290/296 (97.97%), Postives = 291/296 (98.31%), Query Frame = 0


Query: 21  MEIYAPRSCLEKQVLLSFKIARKLKRENLNSPSCNITTRSFRMGSGMLIHSREPSVMTRP 80
           MEIYAPRSCLEKQVLLSFKIARKLKRENLNSPSCNITTRSFRMGSGMLIHS EPSVMTRP
Sbjct: 1   MEIYAPRSCLEKQVLLSFKIARKLKRENLNSPSCNITTRSFRMGSGMLIHSCEPSVMTRP 60

Query: 81  HSYWIQRRHSLPVTSEESSMQSKDLSLDAEEIESAEELLAEPLSSEQLNALLANSERERL 140
            SYWIQRRHSLPVTSEESSMQSKDLSLD EEIESAEELLAEPLSSEQLNALLANSERERL
Sbjct: 61  QSYWIQRRHSLPVTSEESSMQSKDLSLDVEEIESAEELLAEPLSSEQLNALLANSERERL 120

Query: 141 VKRLSHANQQNRLLKRQLRVQDNDLVNFKTELAGLDHEVEGLIKLAEEIAQSGIPEGTRK 200
           VKRLSHANQQNRLLKRQLRVQDNDLVNFKTELA LDHEVEGLIKLAEEIAQSGIPEGTRK
Sbjct: 121 VKRLSHANQQNRLLKRQLRVQDNDLVNFKTELAVLDHEVEGLIKLAEEIAQSGIPEGTRK 180

Query: 201 INGKYIQSHLLTKLKAVHKKIENQIKDVDLVQSKEVQLFWYGMAESVQVMGTFDGWSVGE 260
           INGKYIQSHLLTKLKAVHKKIENQIKDVDLVQSKEV LFWYGMAESVQVMGTFDGWSVGE
Sbjct: 181 INGKYIQSHLLTKLKAVHKKIENQIKDVDLVQSKEVPLFWYGMAESVQVMGTFDGWSVGE 240

Query: 261 DLSPEYTGAYSKFSTTLRLRPGRYEIKFLVDGEWHLSPEFPTVGQGLMENNLLVVE 317
           DLSPEYTGAYSKFSTTLRLRPGRYEIKFLVDGEWHLSPEFPTVG+GLMENNLLVVE
Sbjct: 241 DLSPEYTGAYSKFSTTLRLRPGRYEIKFLVDGEWHLSPEFPTVGEGLMENNLLVVE 296

[Close]

BLAST of CmoCh01G003810 vs. TAIR 10
Match: AT5G39790.1 (5'-AMP-activated protein kinase-related )

HSP 1 Score: 268.5 bits (685), Expect = 7.0e-72
Identity = 145/241 (60.17%), Postives = 187/241 (77.59%), Query Frame = 0


Query: 78  TRPH--SYWIQRRHSLPVTSEESSMQSKDLSLDAEEIESAEELLAEPLSSEQLNALLANS 137
           TR H  +  + +R  + V +EESS+ S+DL          +E L+ PL+S++L +LL ++
Sbjct: 47  TRKHYKNSLLLKRFLVGVGTEESSL-SEDL---------LDESLSRPLTSDELKSLLIDT 106

Query: 138 ERERLVKRLSHANQQNRLLKRQLRVQDNDLVNFKTELAGLDHEVEGLIKLAEEIAQSGIP 197
           ER +LVK+LS ANQQNR LKR    Q++++ N KTELA ++ EV+ L+KLAEEIA  GIP
Sbjct: 107 ERSKLVKKLSEANQQNRFLKR----QEHEITNIKTELALMELEVQALVKLAEEIANLGIP 166

Query: 198 EGTRKINGKYIQSHLLTKLKAVHKKIENQIKDVDLVQSKEVQLFWYGMAESVQVMGTFDG 257
           +G+RKI+GKYIQSHLL++L AV KK++ QIK V+  QSKEV +FW GMAESVQVMG+FDG
Sbjct: 167 QGSRKISGKYIQSHLLSRLDAVQKKMKEQIKGVEAAQSKEVHVFWIGMAESVQVMGSFDG 226

Query: 258 WSVGEDLSPEYTGAYSKFSTTLRLRPGRYEIKFLVDGEWHLSPEFPTVGQGLMENNLLVV 317
           WS  EDLSPEY+  ++KFSTTL LRPGRYE+KFLVDGEW +SPEFPT G+GLMENN+LVV
Sbjct: 227 WSQREDLSPEYSALFTKFSTTLFLRPGRYEMKFLVDGEWQISPEFPTSGEGLMENNVLVV 273

[Close]

BLAST of CmoCh01G003810 vs. TAIR 10
Match: AT1G27070.1 (5'-AMP-activated protein kinase-related )

HSP 1 Score: 65.1 bits (157), Expect = 1.2e-10
Identity = 58/225 (25.78%), Postives = 104/225 (46.22%), Query Frame = 0


Query: 98  SSMQSKDLSLDAEEIESAEELLAEPLSSEQLNALLANSERERLVKRLSHANQQNR----- 157
           + ++  D   D+ +  + ++ +A   SSE +N        ++L   LS      R     
Sbjct: 318 TGVKKDDTKKDSGDSMNGKDRIAS--SSEDVNKTHIKHRLQQLQSELSSVLHSLRSPPDK 377

Query: 158 -LLKRQLRVQDNDLVNFKTELAGLDHE-VEGLIKLAEEIAQSGIPEGTRKINGKYIQSHL 217
            +  +       +L N   +    ++E +    KL    A+  + EG  K+    I +  
Sbjct: 378 VVTSKDSETTAGNLENLSDDWEYKENEIIHAQNKLRSTRAKLAVLEG--KMAMAIIDAQR 437

Query: 218 LTKLKAVHKKIENQIKDVDLVQSKEVQLFWYGMAESVQVMGTFDGWSVGEDLSPEYTGAY 277
           + + K   ++I++  + + L+++    + W   A  V + G+FDGWS    +     G  
Sbjct: 438 IVREK--QRRIDHASRALRLLRT--ASIVWPNSASEVLLTGSFDGWSTQRKMKKAENGV- 497

Query: 278 SKFSTTLRLRPGRYEIKFLVDGEWHLSPEFPTVGQGLMENNLLVV 316
             FS +L+L PG+YEIKF+VDG+W + P  P V  G  ENNLL++
Sbjct: 498 --FSLSLKLYPGKYEIKFIVDGQWKVDPLRPIVTSGGYENNLLII 531

[Close]

BLAST of CmoCh01G003810 vs. TAIR 10
Match: AT5G03420.1 (5'-AMP-activated protein kinase-related )

HSP 1 Score: 64.7 bits (156), Expect = 1.5e-10
Identity = 59/207 (28.50%), Postives = 105/207 (50.72%), Query Frame = 0


Query: 119 LAEPLSSEQLNALLANS-ERERLVKRLSHANQQNRLLKRQLRVQDNDLVNFKTELAGLDH 178
           L E + + ++N+   NS +R+  V   +  + + R  + Q+ +   D + F      LD 
Sbjct: 405 LKEIIHATEVNSSDRNSDQRDGSVGLDTDPHHETRKRENQVEI---DRLRFM-----LDQ 464

Query: 179 EVEGLIKLAEEIAQSGIPEGTRKINGKYIQSHLLTKLKAV-----HKKIENQIKDVDLVQ 238
           +   L +L E+I +        K++   +Q    T+++        K++E Q  +  L  
Sbjct: 465 KELELSRLKEQIEK-------EKLSLSVLQRQAETEIQKAQMLISEKEVELQEAEESLSG 524

Query: 239 SKEVQLFWYGMAESVQVMGTFDGWS--VGEDL-SPEYTGAYSKFSTTLRLRPGRYEIKFL 298
            +EV + + G   +V+V G+F+GW   VG +L + +  G    +ST L L PG YEIKF+
Sbjct: 525 LQEVVIEYCGDGNAVEVTGSFNGWQHRVGMELQASKSIGKQKCWSTLLWLYPGTYEIKFI 584

Query: 299 VDGEWHLSPEFPTVGQGLMENNLLVVE 317
           VDG+W   P+  +V +G + NN+L V+
Sbjct: 585 VDGQWITDPQKDSVTRGHISNNILKVD 596

The following BLAST results are available for this feature:

BLAST of CmoCh01G003810 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94AX2	1.2e-73	61.00	Protein PTST, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PTST PE=1 SV=1	[more]
Q10F03	3.9e-11	34.56	Protein FLOURY ENDOSPERM 6, chloroplastic OS=Oryza sativa subsp. japonica OX=399...	[more]
Q9LFY0	1.6e-09	25.78	Protein PTST homolog 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PTST2 P...	[more]
F4KFB3	2.2e-09	28.50	Protein PTST homolog 3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PTST PE...	[more]
P80387	9.4e-05	29.79	5'-AMP-activated protein kinase subunit beta-1 (Fragment) OS=Sus scrofa OX=9823 ...	[more]

BLAST of CmoCh01G003810 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G9H0	1.1e-160	100.00	protein PTST, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111452163 PE=4 S...	[more]
A0A6J1K8Q8	1.2e-156	98.31	protein PTST, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111493294 PE=4 SV=...	[more]
A0A5D3BTZ2	1.1e-130	84.12	Protein PTST OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold451G001330 ...	[more]
A0A1S3C4P6	1.1e-130	84.12	protein PTST, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC103496819 P...	[more]
A0A6J1CNQ5	1.0e-118	77.44	protein PTST, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111013285 PE=4 ...	[more]

BLAST of CmoCh01G003810 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6607014.1	1.2e-171	99.37	Protein PTST, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022948503.1	2.2e-160	100.00	protein PTST, chloroplastic [Cucurbita moschata] >XP_022948504.1 protein PTST, c...	[more]
KAG7036711.1	8.3e-160	99.66	Protein PTST, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022998711.1	2.5e-156	98.31	protein PTST, chloroplastic [Cucurbita maxima] >XP_022998712.1 protein PTST, chl...	[more]
XP_023524701.1	5.6e-156	97.97	protein PTST, chloroplastic [Cucurbita pepo subsp. pepo] >XP_023524702.1 protein...	[more]

BLAST of CmoCh01G003810 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G39790.1	7.0e-72	60.17	5'-AMP-activated protein kinase-related	[more]
AT1G27070.1	1.2e-10	25.78	5'-AMP-activated protein kinase-related	[more]
AT5G03420.1	1.5e-10	28.50	5'-AMP-activated protein kinase-related	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 137..157
None	No IPR available	PANTHER	PTHR47342	PROTEIN PTST, CHLOROPLASTIC	coord: 27..316
None	No IPR available	CDD	cd02859	E_set_AMPKbeta_like_N	coord: 235..315 e-value: 1.01863E-22 score: 88.0396
IPR013783	Immunoglobulin-like fold	GENE3D	2.60.40.10	Immunoglobulins	coord: 229..316 e-value: 2.8E-18 score: 67.5
IPR032640	AMP-activated protein kinase, glycogen-binding domain	PFAM	PF16561	AMPK1_CBM	coord: 236..305 e-value: 5.5E-15 score: 55.3
IPR014756	Immunoglobulin E-set	SUPERFAMILY	81296	E set domains	coord: 235..315

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh01G003810.1	CmoCh01G003810.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010581	regulation of starch biosynthetic process
cellular_component	GO:0009569	chloroplast starch grain
cellular_component	GO:0009570	chloroplast stroma
molecular_function	GO:2001070	starch binding