CmoCh01G002940 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh01G002940
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	ATP-dependent Clp protease proteolytic subunit
Location	Cmo_Chr01: 1397300 .. 1401193 (+)
RNA-Seq Expression	CmoCh01G002940
Synteny	CmoCh01G002940

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACTGACTTGTCGGGCTCAGTGAGTGTGAAAGCGAAGGGGCTCGAAGCCTCTGATGGAGATATTAACAGAGGTCACTGCCATCGAATTACTTGTTCGACCCATCTTCTTCTTCATCTCTATCTTCGCCGTCGTTCGCTTCTTCCCTCGGATAAGGCCTCTCGGACTTTGCTCCGAATTCTCGGCAGGTTCTTCTTCACCCTATTGCTTTCTGTCCAGTTTTTCCGAAACCTTCAGCTGCAAAAATGGCCCATACTTTCACCTACACATCTGCCTCGTCTTTCAGATTAAACTCCCTCGTTTCTGTTCCAAATTCGAGCTCTTCTTCCGAGTCTCAGAAGCTCTTTCTTCCGTTGGAGAATTTCCATTCGAGGTACCTGTTTTTGGTTGTCTTCGTTTTTTGTGTTTCGATTCAATGTTAGTTTAATTTGGTGTTTGAATGTGTTAGCGTCTTTGAATCAGGTTAGTGAGACGATGATGGATTGTTTGAATTGGTGCATTACTTAGTTTTAAGTTTGAAAATGGAAGGGTTTCGACGTCCAATTGGACTTTGGGTATTTGCAGATTACTGGTACCAATGGCACGCTTTTGGATGCATGATAAGATTGGGAAATTCTGGTTTTTTTTTTTTTTTTAACCTCAATTTTGTTACCGTTCTACTCTTCTGGGGATGAACTTAAATTCAAACCCCTCTATTTTGTACTTTTTTTCTTTTCTGCTGCAGAAGTTGTGTTCTCGTATTTCTCTATTGTTTTAATTGTAGCAGCAACGGGTAATGTCCTATTTGCAGGAAACTAGGAAAATTCGTTGGAGGTGGAAGAAACCTTAAGAATTCTCCTGTCAAAGCCATCTACTCAGGAGAGTTTTCATCATTGGATAAGAGTTCTCGCCGAGGACTTTGGTCTATAAGGTGCATAGATTGATGAACTTGGAATTTCCCCTTTCATTCTTTTGAGGCTAAAGAAGGCTATAATCATTACCATTTATTGAAATACTAAGCATAGACATGGTGAAATTATATTTCTGTATGATTCATAGGGATGATGTGCAAATTCCATCTTCACCATACTTTCCAACGTACGCGCAAGGGCAAGGTCCTCCTCCAATGGTGCAGGAGCGCTTCCAAAGTGTTATCAGCCAGCTATTTCAACATGTAAGGGTGTAGTTCTACGATATTTATTTCCTCGGCCCAGGTTTGGTGTAGCGCGTGTAGGTTGTTATCACTATCTTTTGATAATTTAATTTGCTTTGGACTAGAGAATTGTTCGTTGTGGTGGTGCGGTTGATGATGATATGGCTAATATCATTGTTGCTCAACTTCTATACCTTGATGCTGTTGATCCCAATAAGGTTCCTTTTTTGGTTCTCAATCCATTTTAAGGAAGTATCTCATATACAGTTTGTTATCGTTTCTGCATAATTAATCAATTAACTAAATATTTTTGGTATGTTTAACAGGATATCATTTTGTATGTAAATTCCCCTGGTGGATCTGTTACAGCTGGTAATATTGGAATCAGAAAACTATTTCACCAATCATTTGTTCATTGGAGATTCGGATTAGTGTTATCCTTTAACCACTGATTCACTTGGATCTGTGCAGGTATGGCCATTTTTGACACTATGAGGCATATTCGACCAGATGTCTCTACTGTCTGCGTAGGACTAGCCGCAAGGTACAAGATTAATTGGAGCATCCGTACTTTTATGAGCTGATACATTCTGATTTTTTCCTTTTATTCCCCAAGTGTTATTTGCAATTTGTTGTGGCATTGCTGAATTGTGTTGGGAAGAATTATTATCTAAACTAAAATAGTCGCATATCGCTTCCTCTTGGTTCCAATTATCATCTTTTTCTACTAGTTTTATGGCTTGCATAATATAGATACGTTTATGAAGGCTGCGTCTCTTGTACAGTGTATCAGTAACTTAGGAAAGATAGAAAGAGGAAAGTATGAGTGTAACAGCCCAAGCCCACCGCTAGCAGATATTATCTTCTCTGGGCTTTCCCTTTCGGACTTCCCCTAAAGGTTTTTAAAACGTGTCTACTAGGGAGAGGTTTCCATATCCTTATAAAGAATGTTTCGTTCTCCTCCCCAACCAATGTGAGATCTCATAATCCACCCTCCTTCAGGGCCCAGCGTCGTTGCTGGTAGTGGTTCCCTTCTCCGGCATTGGTTCCCTTCTCTAATCGATATGGGACCCCTGAATCCACCTCCTTTTGGGGCCAAGCGTCCATGCTGGCACACCGCCTCGTGTCCACCCCCCTTCAGGGCTCAACCTCCTTACTAGCACATCGCCCGATGTTTGGCTCTGATACCATTTGTAACAGCCCAAGCCCACCGCTAGCAGATATTGTCTTCTTTGGACTTTCCCTCAAGGTTTTTAAAACACGTCTGCTAGGGAGTGTTTCCACATCCTTATTAGAAAGAATGTTTCGTTCTCCTTCTCGCAATGAGCGAGAAGGAGAAGTTTTCCCACCATAAAGCTATTATCTGTAACCTCACCCTCATTTTTTAAAGTAATATGTTTGTTCTTATATTTGGTTCTCCGTTTGTTGTAATAATTGACAGTATGGGAGCTTTCCTGCTTAGTGCTGGAACTAAAGGTACAAGTTTTTAGTGTCATCAAATTTTGGAATTTTATTTTTGTAGTTCTTTTTAAATGACATATTTCTGTGTATTAAGTATGCACCTTGTTTCTCCTTTATTTGTGAAGGAAAAAGATACAGCTTACCAAATTCAAGGATAATGATCCATCAGCCTCTTGGTGGTGCTCAGGGTGGACAGACTGACATTGATATTCAGGTATACTTATACATCCTCATGGATGATCAATAAAGTATTGATAAAATTCTACATTTGTTTTATGATACTTGTAATACTTCCTTTGGTTGCATTATATTGTCAAGGTACTTCATATATAGGCTTTGAGGATGAGTTTGGAGCTAATTTGTTTTTGTTTAGTAAGCTATCATTCCACAAGTCTTCAAGAACATTAAGAAAATGAAAATTTTCATGTACACCTTGAACAAGTTTTTGGTAGGAGAATTTAGATTGTTTTTAGCAGGAATGTACTATTACCTTAGATTAGTAGATTATTGATTCTCTGATTTCATCCATGTTAATTTTAGACATTTTCAACAAAGCCCCTAAACTGCAACTTGCTTGGCAGGCAAATGAAATGTTGTATCATAAGGCTAATCTTAACGGGTATCTTTCCTACCACACCGGTCAAAGTCTCGAGAAGATTAACGAAGACACTGATCGCGATTTCTTCATGAGCGCCAAAGAAGCCGAAGAGTATGGACTCATAGATGGAGTCATCATGAATCCTCTCAAAGCTTTCCAACCTTTAGCAGCTGCAGCTTCCACCGAAAACGAGCCGGGTTCGTAAATTTCATCCTGCTGAGTAGCAACCGGTTAGATATTCTTCTTCTTGTAGATTTTAATGCAAAAACCATCGTAGTGTATGCAGATTTTGACCATTATAACAACATGGCTTCCATGCTTTCATCTTAGAAAATCTTTAAATGTCCATTGAATTCCTGTTAGTTTCCTTACACCACCAAGATATTTTATTCAAATGCCCCTCAAGTTTTTGGTTGGTTGGGATGACAAGGATAATGTTAGCCTGACACTTGGCAATGTCTGGTTGGGTGTTGGAAAAGATGCCGCCGACCCTATAAAAGACAGCATTATTATGAAGTCACTATCTTGATTGTGGATTAATATGCGTTAGGTTTCAATGAGAATTTCTAATGCATTCAGTAGCTTTCCGTATGCGTTGCGGGGAGGGTTTTATTACCTGTGAAATTGGCTGTTTCTGATATTTTAGTGCTCTTTTTTTCAATGGAGTTGTTGCATTATGGATGTGTTTCTTGACAAACTTGGG

mRNA sequence

ATGACTGACTTGTCGGGCTCAGTGAGTGTGAAAGCGAAGGGGCTCGAAGCCTCTGATGGAGATATTAACAGAGGCCTCTCGGACTTTGCTCCGAATTCTCGGCAGGTTCTTCTTCACCCTATTGCTTTCTGTCCAGTTTTTCCGAAACCTTCAGCTGCAAAAATGGCCCATACTTTCACCTACACATCTGCCTCGTCTTTCAGATTAAACTCCCTCGTTTCTGTTCCAAATTCGAGCTCTTCTTCCGAGTCTCAGAAGCTCTTTCTTCCGTTGGAGAATTTCCATTCGAGGAAACTAGGAAAATTCGTTGGAGGTGGAAGAAACCTTAAGAATTCTCCTGTCAAAGCCATCTACTCAGGAGAGTTTTCATCATTGGATAAGAGTTCTCGCCGAGGACTTTGGTCTATAAGGGATGATGTGCAAATTCCATCTTCACCATACTTTCCAACGTACGCGCAAGGGCAAGGTCCTCCTCCAATGGTGCAGGAGCGCTTCCAAAGTGTTATCAGCCAGCTATTTCAACATAGAATTGTTCGTTGTGGTGGTGCGGTTGATGATGATATGGCTAATATCATTGTTGCTCAACTTCTATACCTTGATGCTGTTGATCCCAATAAGGATATCATTTTGTATGTAAATTCCCCTGGTGGATCTGTTACAGCTGGTATGGCCATTTTTGACACTATGAGGCATATTCGACCAGATGTCTCTACTGTCTGCGTAGGACTAGCCGCAAGTATGGGAGCTTTCCTGCTTAGTGCTGGAACTAAAGGAAAAAGATACAGCTTACCAAATTCAAGGATAATGATCCATCAGCCTCTTGGTGGTGCTCAGGGTGGACAGACTGACATTGATATTCAGGCAAATGAAATGTTGTATCATAAGGCTAATCTTAACGGGTATCTTTCCTACCACACCGGTCAAAGTCTCGAGAAGATTAACGAAGACACTGATCGCGATTTCTTCATGAGCGCCAAAGAAGCCGAAGAGTATGGACTCATAGATGGAGTCATCATGAATCCTCTCAAAGCTTTCCAACCTTTAGCAGCTGCAGCTTCCACCGAAAACGAGCCGGGTTCGTAAATTTCATCCTGCTGAGTAGCAACCGGTTAGATATTCTTCTTCTTGTAGATTTTAATGCAAAAACCATCGTAGTGTATGCAGATTTTGACCATTATAACAACATGGCTTCCATGCTTTCATCTTAGAAAATCTTTAAATGTCCATTGAATTCCTGTTAGTTTCCTTACACCACCAAGATATTTTATTCAAATGCCCCTCAAGTTTTTGGTTGGTTGGGATGACAAGGATAATGTTAGCCTGACACTTGGCAATGTCTGGTTGGGTGTTGGAAAAGATGCCGCCGACCCTATAAAAGACAGCATTATTATGAAGTCACTATCTTGATTGTGGATTAATATGCGTTAGGTTTCAATGAGAATTTCTAATGCATTCAGTAGCTTTCCGTATGCGTTGCGGGGAGGGTTTTATTACCTGTGAAATTGGCTGTTTCTGATATTTTAGTGCTCTTTTTTTCAATGGAGTTGTTGCATTATGGATGTGTTTCTTGACAAACTTGGG

Coding sequence (CDS)

ATGACTGACTTGTCGGGCTCAGTGAGTGTGAAAGCGAAGGGGCTCGAAGCCTCTGATGGAGATATTAACAGAGGCCTCTCGGACTTTGCTCCGAATTCTCGGCAGGTTCTTCTTCACCCTATTGCTTTCTGTCCAGTTTTTCCGAAACCTTCAGCTGCAAAAATGGCCCATACTTTCACCTACACATCTGCCTCGTCTTTCAGATTAAACTCCCTCGTTTCTGTTCCAAATTCGAGCTCTTCTTCCGAGTCTCAGAAGCTCTTTCTTCCGTTGGAGAATTTCCATTCGAGGAAACTAGGAAAATTCGTTGGAGGTGGAAGAAACCTTAAGAATTCTCCTGTCAAAGCCATCTACTCAGGAGAGTTTTCATCATTGGATAAGAGTTCTCGCCGAGGACTTTGGTCTATAAGGGATGATGTGCAAATTCCATCTTCACCATACTTTCCAACGTACGCGCAAGGGCAAGGTCCTCCTCCAATGGTGCAGGAGCGCTTCCAAAGTGTTATCAGCCAGCTATTTCAACATAGAATTGTTCGTTGTGGTGGTGCGGTTGATGATGATATGGCTAATATCATTGTTGCTCAACTTCTATACCTTGATGCTGTTGATCCCAATAAGGATATCATTTTGTATGTAAATTCCCCTGGTGGATCTGTTACAGCTGGTATGGCCATTTTTGACACTATGAGGCATATTCGACCAGATGTCTCTACTGTCTGCGTAGGACTAGCCGCAAGTATGGGAGCTTTCCTGCTTAGTGCTGGAACTAAAGGAAAAAGATACAGCTTACCAAATTCAAGGATAATGATCCATCAGCCTCTTGGTGGTGCTCAGGGTGGACAGACTGACATTGATATTCAGGCAAATGAAATGTTGTATCATAAGGCTAATCTTAACGGGTATCTTTCCTACCACACCGGTCAAAGTCTCGAGAAGATTAACGAAGACACTGATCGCGATTTCTTCATGAGCGCCAAAGAAGCCGAAGAGTATGGACTCATAGATGGAGTCATCATGAATCCTCTCAAAGCTTTCCAACCTTTAGCAGCTGCAGCTTCCACCGAAAACGAGCCGGGTTCGTAA

Protein sequence

MTDLSGSVSVKAKGLEASDGDINRGLSDFAPNSRQVLLHPIAFCPVFPKPSAAKMAHTFTYTSASSFRLNSLVSVPNSSSSSESQKLFLPLENFHSRKLGKFVGGGRNLKNSPVKAIYSGEFSSLDKSSRRGLWSIRDDVQIPSSPYFPTYAQGQGPPPMVQERFQSVISQLFQHRIVRCGGAVDDDMANIIVAQLLYLDAVDPNKDIILYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLYHKANLNGYLSYHTGQSLEKINEDTDRDFFMSAKEAEEYGLIDGVIMNPLKAFQPLAAAASTENEPGS

Homology

[Close]

BLAST of CmoCh01G002940 vs. ExPASy Swiss-Prot
Match: Q9S834 (ATP-dependent Clp protease proteolytic subunit 5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CLPP5 PE=1 SV=1)

HSP 1 Score: 472.6 bits (1215), Expect = 3.9e-132
Identity = 239/298 (80.20%), Postives = 259/298 (86.91%), Query Frame = 0


Query: 55  MAHTFTYTSASSFRLNS-LVSVPNSSSSSESQKLFLPLENFHSRKLGKFVGGGRNLKNSP 114
           MAH    TSASS R  +  VS   + SS +S KL LP E   SRK  K V   +N KNS 
Sbjct: 1   MAHACVSTSASSLRFTAGFVSASPNGSSFDSPKLSLPFEPLRSRKTNKLVSDRKNWKNST 60

Query: 115 VKAIYSGEFSSLDKSSRRGLWSIRDDVQIPSSPYFPTYAQGQGPPPMVQERFQSVISQLF 174
            KA+YSG   + +  S +G+WSIRDD+Q+PSSPYFP YAQGQGPPPMVQERFQS+ISQLF
Sbjct: 61  PKAVYSGNLWTPEIPSPQGVWSIRDDLQVPSSPYFPAYAQGQGPPPMVQERFQSIISQLF 120

Query: 175 QHRIVRCGGAVDDDMANIIVAQLLYLDAVDPNKDIILYVNSPGGSVTAGMAIFDTMRHIR 234
           Q+RI+RCGGAVDDDMANIIVAQLLYLDAVDP KDI++YVNSPGGSVTAGMAIFDTMRHIR
Sbjct: 121 QYRIIRCGGAVDDDMANIIVAQLLYLDAVDPTKDIVMYVNSPGGSVTAGMAIFDTMRHIR 180

Query: 235 PDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLY 294
           PDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEML+
Sbjct: 181 PDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLH 240

Query: 295 HKANLNGYLSYHTGQSLEKINEDTDRDFFMSAKEAEEYGLIDGVIMNPLKAFQPLAAA 352
           HKANLNGYL+YHTGQSLEKIN+DTDRDFFMSAKEA+EYGLIDGVIMNPLKA QPLAAA
Sbjct: 241 HKANLNGYLAYHTGQSLEKINQDTDRDFFMSAKEAKEYGLIDGVIMNPLKALQPLAAA 298

[Close]

BLAST of CmoCh01G002940 vs. ExPASy Swiss-Prot
Match: Q3MFR5 (ATP-dependent Clp protease proteolytic subunit 1 OS=Trichormus variabilis (strain ATCC 29413 / PCC 7937) OX=240292 GN=clpP1 PE=3 SV=1)

HSP 1 Score: 258.1 bits (658), Expect = 1.5e-67
Identity = 128/187 (68.45%), Postives = 149/187 (79.68%), Query Frame = 0


Query: 163 ERFQSVISQLFQHRIVRCGGAVDDDMANIIVAQLLYLDAVDPNKDIILYVNSPGGSVTAG 222
           ER   + S+L + RI+  G  VD ++AN+IVAQLL+LDA DP KDI LY+NSPGGSVTAG
Sbjct: 14  ERAFDIYSRLLRERIIFLGQQVDSNLANLIVAQLLFLDAEDPEKDIYLYINSPGGSVTAG 73

Query: 223 MAIFDTMRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQT 282
           M IFDTM+HIRPDV T+C GLAASMGAFLLSAGTKGKR SLP+SRIMIHQPLGGAQG  T
Sbjct: 74  MGIFDTMKHIRPDVCTICTGLAASMGAFLLSAGTKGKRMSLPHSRIMIHQPLGGAQGQAT 133

Query: 283 DIDIQANEMLYHKANLNGYLSYHTGQSLEKINEDTDRDFFMSAKEAEEYGLIDGVIMNPL 342
           DI+IQA E+LYHK  LN YL+ HTGQ +E+I EDT+RDFFMS  EA +YGLID VI    
Sbjct: 134 DIEIQAREILYHKRRLNDYLAEHTGQPIERIAEDTERDFFMSPDEARDYGLIDQVIDRHA 193

Query: 343 KAFQPLA 350
              +P+A
Sbjct: 194 AGSRPVA 200

[Close]

BLAST of CmoCh01G002940 vs. ExPASy Swiss-Prot
Match: Q8YXH5 (ATP-dependent Clp protease proteolytic subunit 1 OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) OX=103690 GN=clpP1 PE=3 SV=1)

HSP 1 Score: 256.9 bits (655), Expect = 3.4e-67
Identity = 128/187 (68.45%), Postives = 149/187 (79.68%), Query Frame = 0


Query: 163 ERFQSVISQLFQHRIVRCGGAVDDDMANIIVAQLLYLDAVDPNKDIILYVNSPGGSVTAG 222
           ER   + S+L + RIV  G  VD ++AN+IVAQLL+LDA DP KDI LY+NSPGGSVTAG
Sbjct: 14  ERAFDIYSRLLRERIVFLGQQVDSNLANLIVAQLLFLDAEDPEKDIYLYINSPGGSVTAG 73

Query: 223 MAIFDTMRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQT 282
           M IFDTM+HIRPDV T+C GLAASMGAFLLSAG KGKR SLP+SRIMIHQPLGGAQG  T
Sbjct: 74  MGIFDTMKHIRPDVCTICTGLAASMGAFLLSAGAKGKRMSLPHSRIMIHQPLGGAQGQAT 133

Query: 283 DIDIQANEMLYHKANLNGYLSYHTGQSLEKINEDTDRDFFMSAKEAEEYGLIDGVIMNPL 342
           DI+IQA E+LYHK  LN YL+ HTGQ +E+I EDT+RDFFMS  EA++YGLID VI    
Sbjct: 134 DIEIQAREILYHKRRLNDYLAEHTGQPIERIAEDTERDFFMSPDEAKDYGLIDQVIDRHA 193

Query: 343 KAFQPLA 350
              +P+A
Sbjct: 194 AGSRPVA 200

[Close]

BLAST of CmoCh01G002940 vs. ExPASy Swiss-Prot
Match: Q2JIP1 (ATP-dependent Clp protease proteolytic subunit 2 OS=Synechococcus sp. (strain JA-2-3B'a(2-13)) OX=321332 GN=clpP2 PE=3 SV=1)

HSP 1 Score: 246.9 bits (629), Expect = 3.5e-64
Identity = 124/191 (64.92%), Postives = 153/191 (80.10%), Query Frame = 0


Query: 163 ERFQSVISQLFQHRIVRCGGAVDDDMANIIVAQLLYLDAVDPNKDIILYVNSPGGSVTAG 222
           ER   + S+L + RI+  G  VDDD+AN+IVAQ+LYL++ DP KDI LY+NSPGGSV AG
Sbjct: 13  ERAFDIYSRLLRDRIIFLGTQVDDDIANLIVAQMLYLESEDPEKDIYLYINSPGGSVYAG 72

Query: 223 MAIFDTMRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQT 282
           MAI+DTM+HI+PDVST+C+GLAASMGAFLL+ GTKGKR +LP++RIMIHQPLGGAQG  T
Sbjct: 73  MAIYDTMQHIQPDVSTICIGLAASMGAFLLAGGTKGKRIALPHARIMIHQPLGGAQGPAT 132

Query: 283 DIDIQANEMLYHKANLNGYLSYHTGQSLEKINEDTDRDFFMSAKEAEEYGLIDGVIMNPL 342
           DI+IQA E+L+ K +LN  L+YHTGQ LE+I  DTDRD FM+ ++A+EYGLID VI    
Sbjct: 133 DIEIQAKEILFIKNSLNSLLAYHTGQPLERIERDTDRDNFMTPEQAKEYGLIDQVIS--- 192

Query: 343 KAFQPLAAAAS 354
           K  QP  AA S
Sbjct: 193 KRPQPTLAAVS 200

[Close]

BLAST of CmoCh01G002940 vs. ExPASy Swiss-Prot
Match: P54416 (ATP-dependent Clp protease proteolytic subunit 1 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=clpP1 PE=3 SV=1)

HSP 1 Score: 245.0 bits (624), Expect = 1.3e-63
Identity = 123/186 (66.13%), Postives = 148/186 (79.57%), Query Frame = 0


Query: 163 ERFQSVISQLFQHRIVRCGGAVDDDMANIIVAQLLYLDAVDPNKDIILYVNSPGGSVTAG 222
           +R   + S+L + RIV  G  V D+ AN++VAQLL+L+A DP KDI LY+NSPGGSV+AG
Sbjct: 13  DRAFDIYSRLLRERIVFLGQEVRDENANLVVAQLLFLEAEDPEKDIYLYINSPGGSVSAG 72

Query: 223 MAIFDTMRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQT 282
           + IFDTM  IRPDV T+C+GLAASMGAFLLSAG KGKR SLPNSRIMIHQPLGGAQG  T
Sbjct: 73  LGIFDTMNQIRPDVCTICIGLAASMGAFLLSAGAKGKRMSLPNSRIMIHQPLGGAQGQAT 132

Query: 283 DIDIQANEMLYHKANLNGYLSYHTGQSLEKINEDTDRDFFMSAKEAEEYGLIDGVIMNPL 342
           DI+IQA E+LY KA LN +L+ HTG+SLE+I  DT+RDFFMSA+E++EYGLID VI    
Sbjct: 133 DIEIQAKEILYLKALLNQHLANHTGKSLEEITADTERDFFMSAEESKEYGLIDQVINRRP 192

Query: 343 KAFQPL 349
            A  P+
Sbjct: 193 SASDPI 198

[Close]

BLAST of CmoCh01G002940 vs. ExPASy TrEMBL
Match: A0A6J1GAD0 (ATP-dependent Clp protease proteolytic subunit OS=Cucurbita moschata OX=3662 GN=LOC111452367 PE=3 SV=1)

HSP 1 Score: 607.8 bits (1566), Expect = 2.9e-170
Identity = 306/306 (100.00%), Postives = 306/306 (100.00%), Query Frame = 0


Query: 55  MAHTFTYTSASSFRLNSLVSVPNSSSSSESQKLFLPLENFHSRKLGKFVGGGRNLKNSPV 114
           MAHTFTYTSASSFRLNSLVSVPNSSSSSESQKLFLPLENFHSRKLGKFVGGGRNLKNSPV
Sbjct: 1   MAHTFTYTSASSFRLNSLVSVPNSSSSSESQKLFLPLENFHSRKLGKFVGGGRNLKNSPV 60

Query: 115 KAIYSGEFSSLDKSSRRGLWSIRDDVQIPSSPYFPTYAQGQGPPPMVQERFQSVISQLFQ 174
           KAIYSGEFSSLDKSSRRGLWSIRDDVQIPSSPYFPTYAQGQGPPPMVQERFQSVISQLFQ
Sbjct: 61  KAIYSGEFSSLDKSSRRGLWSIRDDVQIPSSPYFPTYAQGQGPPPMVQERFQSVISQLFQ 120

Query: 175 HRIVRCGGAVDDDMANIIVAQLLYLDAVDPNKDIILYVNSPGGSVTAGMAIFDTMRHIRP 234
           HRIVRCGGAVDDDMANIIVAQLLYLDAVDPNKDIILYVNSPGGSVTAGMAIFDTMRHIRP
Sbjct: 121 HRIVRCGGAVDDDMANIIVAQLLYLDAVDPNKDIILYVNSPGGSVTAGMAIFDTMRHIRP 180

Query: 235 DVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLYH 294
           DVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLYH
Sbjct: 181 DVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLYH 240

Query: 295 KANLNGYLSYHTGQSLEKINEDTDRDFFMSAKEAEEYGLIDGVIMNPLKAFQPLAAAAST 354
           KANLNGYLSYHTGQSLEKINEDTDRDFFMSAKEAEEYGLIDGVIMNPLKAFQPLAAAAST
Sbjct: 241 KANLNGYLSYHTGQSLEKINEDTDRDFFMSAKEAEEYGLIDGVIMNPLKAFQPLAAAAST 300

Query: 355 ENEPGS 361
           ENEPGS
Sbjct: 301 ENEPGS 306

[Close]

BLAST of CmoCh01G002940 vs. ExPASy TrEMBL
Match: A0A6J1K7I3 (ATP-dependent Clp protease proteolytic subunit OS=Cucurbita maxima OX=3661 GN=LOC111492965 PE=3 SV=1)

HSP 1 Score: 597.8 bits (1540), Expect = 3.0e-167
Identity = 300/304 (98.68%), Postives = 303/304 (99.67%), Query Frame = 0


Query: 55  MAHTFTYTSASSFRLNSLVSVPNSSSSSESQKLFLPLENFHSRKLGKFVGGGRNLKNSPV 114
           MAHTFTYTSASSFRLNSLVSVPNSSSSS+SQKLFLPLENFHSRKLGK VGGGRNLKNSPV
Sbjct: 1   MAHTFTYTSASSFRLNSLVSVPNSSSSSDSQKLFLPLENFHSRKLGKLVGGGRNLKNSPV 60

Query: 115 KAIYSGEFSSLDKSSRRGLWSIRDDVQIPSSPYFPTYAQGQGPPPMVQERFQSVISQLFQ 174
           KAIYSGEFSSLDKSSR+GLWSIRDDVQIPSSPYFPTYAQGQGPPPMVQERFQSVISQLFQ
Sbjct: 61  KAIYSGEFSSLDKSSRQGLWSIRDDVQIPSSPYFPTYAQGQGPPPMVQERFQSVISQLFQ 120

Query: 175 HRIVRCGGAVDDDMANIIVAQLLYLDAVDPNKDIILYVNSPGGSVTAGMAIFDTMRHIRP 234
           HRIVRCGGAVDDDMANIIVAQLLYLDAVDPNKDIILYVNSPGGSVTAGMAIFDTMRHIRP
Sbjct: 121 HRIVRCGGAVDDDMANIIVAQLLYLDAVDPNKDIILYVNSPGGSVTAGMAIFDTMRHIRP 180

Query: 235 DVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLYH 294
           DVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLYH
Sbjct: 181 DVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLYH 240

Query: 295 KANLNGYLSYHTGQSLEKINEDTDRDFFMSAKEAEEYGLIDGVIMNPLKAFQPLAAAAST 354
           KANLNGYLSYHTGQSLEKINEDTDRDFFMSAKEAEEYGLIDGVIMNPLKAFQPLAAAAST
Sbjct: 241 KANLNGYLSYHTGQSLEKINEDTDRDFFMSAKEAEEYGLIDGVIMNPLKAFQPLAAAAST 300

Query: 355 ENEP 359
           EN+P
Sbjct: 301 ENKP 304

[Close]

BLAST of CmoCh01G002940 vs. ExPASy TrEMBL
Match: A0A6J1DRD0 (ATP-dependent Clp protease proteolytic subunit OS=Momordica charantia OX=3673 GN=LOC111022448 PE=3 SV=1)

HSP 1 Score: 572.0 bits (1473), Expect = 1.7e-159
Identity = 285/306 (93.14%), Postives = 298/306 (97.39%), Query Frame = 0


Query: 55  MAHTFTYTSASSFRLNSLVSVPNSSSSSESQKLFLPLENFHSRKLGKFVGGGRNLKNSPV 114
           MAHTF YTSASSFRLNSLVSVPNSSSSSESQKLFLPL+ F SRKLGK VGGGRNLKN+PV
Sbjct: 1   MAHTFAYTSASSFRLNSLVSVPNSSSSSESQKLFLPLDPFQSRKLGKLVGGGRNLKNTPV 60

Query: 115 KAIYSGEFSSLDKSSRRGLWSIRDDVQIPSSPYFPTYAQGQGPPPMVQERFQSVISQLFQ 174
           KAIYS EFSSLD+SSR+GLWSIRDDVQIPSSPYFPTYAQGQGPPPMVQERF SVISQLFQ
Sbjct: 61  KAIYSSEFSSLDRSSRQGLWSIRDDVQIPSSPYFPTYAQGQGPPPMVQERFHSVISQLFQ 120

Query: 175 HRIVRCGGAVDDDMANIIVAQLLYLDAVDPNKDIILYVNSPGGSVTAGMAIFDTMRHIRP 234
           +RI+RCGGAVDDDMANIIVAQLLYLDAVDPNKDI++YVNSPGGSVTAGMAIFDTMRHIRP
Sbjct: 121 YRIIRCGGAVDDDMANIIVAQLLYLDAVDPNKDIVMYVNSPGGSVTAGMAIFDTMRHIRP 180

Query: 235 DVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLYH 294
           DVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEML+H
Sbjct: 181 DVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLHH 240

Query: 295 KANLNGYLSYHTGQSLEKINEDTDRDFFMSAKEAEEYGLIDGVIMNPLKAFQPLAAAAST 354
           KANLNGYLSYHTGQSLEKIN+DTDRDFFMSAKEA+EYGLIDGVIMNPLKA QPLAAAA+T
Sbjct: 241 KANLNGYLSYHTGQSLEKINQDTDRDFFMSAKEAKEYGLIDGVIMNPLKALQPLAAAAAT 300

Query: 355 ENEPGS 361
           E EPG+
Sbjct: 301 EAEPGA 306

[Close]

BLAST of CmoCh01G002940 vs. ExPASy TrEMBL
Match: A0A5A7TNH0 (ATP-dependent Clp protease proteolytic subunit OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G001490 PE=3 SV=1)

HSP 1 Score: 570.1 bits (1468), Expect = 6.6e-159
Identity = 280/304 (92.11%), Postives = 298/304 (98.03%), Query Frame = 0


Query: 55  MAHTFTYTSASSFRLNSLVSVPNSSSSSESQKLFLPLENFHSRKLGKFVGGGRNLKNSPV 114
           MAHTF YTSASSFRLNSLVSVPNSSSSS+SQK FLPLE FHSRKLGK VGGGRNLKNSPV
Sbjct: 1   MAHTFAYTSASSFRLNSLVSVPNSSSSSDSQKFFLPLEPFHSRKLGKLVGGGRNLKNSPV 60

Query: 115 KAIYSGEFSSLDKSSRRGLWSIRDDVQIPSSPYFPTYAQGQGPPPMVQERFQSVISQLFQ 174
           KA+YSGEFSS+D++SR+G+WSIRDDVQ+PSSPYFP YAQGQGPPPMVQERFQSVISQLFQ
Sbjct: 61  KAMYSGEFSSMDRNSRQGIWSIRDDVQVPSSPYFPVYAQGQGPPPMVQERFQSVISQLFQ 120

Query: 175 HRIVRCGGAVDDDMANIIVAQLLYLDAVDPNKDIILYVNSPGGSVTAGMAIFDTMRHIRP 234
           +RI+RCGGAVDDDMANIIVAQLLYLDAVDPNKDI++YVNSPGGSVTAGMAIFDTMRHIRP
Sbjct: 121 YRIIRCGGAVDDDMANIIVAQLLYLDAVDPNKDIVMYVNSPGGSVTAGMAIFDTMRHIRP 180

Query: 235 DVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLYH 294
           DVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEML+H
Sbjct: 181 DVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLHH 240

Query: 295 KANLNGYLSYHTGQSLEKINEDTDRDFFMSAKEAEEYGLIDGVIMNPLKAFQPLAAAAST 354
           KANLNGYLSYHTGQSLEKIN+DTDRDFFMSAKEA++YGLIDGVIMNPLKA QPLAAAAST
Sbjct: 241 KANLNGYLSYHTGQSLEKINQDTDRDFFMSAKEAKDYGLIDGVIMNPLKALQPLAAAAST 300

Query: 355 ENEP 359
           E++P
Sbjct: 301 EDKP 304

[Close]

BLAST of CmoCh01G002940 vs. ExPASy TrEMBL
Match: A0A1S3BY88 (ATP-dependent Clp protease proteolytic subunit OS=Cucumis melo OX=3656 GN=LOC103494727 PE=3 SV=1)

HSP 1 Score: 570.1 bits (1468), Expect = 6.6e-159
Identity = 280/304 (92.11%), Postives = 298/304 (98.03%), Query Frame = 0


Query: 55  MAHTFTYTSASSFRLNSLVSVPNSSSSSESQKLFLPLENFHSRKLGKFVGGGRNLKNSPV 114
           MAHTF YTSASSFRLNSLVSVPNSSSSS+SQK FLPLE FHSRKLGK VGGGRNLKNSPV
Sbjct: 1   MAHTFAYTSASSFRLNSLVSVPNSSSSSDSQKFFLPLEPFHSRKLGKLVGGGRNLKNSPV 60

Query: 115 KAIYSGEFSSLDKSSRRGLWSIRDDVQIPSSPYFPTYAQGQGPPPMVQERFQSVISQLFQ 174
           KA+YSGEFSS+D++SR+G+WSIRDDVQ+PSSPYFP YAQGQGPPPMVQERFQSVISQLFQ
Sbjct: 61  KAMYSGEFSSMDRNSRQGIWSIRDDVQVPSSPYFPVYAQGQGPPPMVQERFQSVISQLFQ 120

Query: 175 HRIVRCGGAVDDDMANIIVAQLLYLDAVDPNKDIILYVNSPGGSVTAGMAIFDTMRHIRP 234
           +RI+RCGGAVDDDMANIIVAQLLYLDAVDPNKDI++YVNSPGGSVTAGMAIFDTMRHIRP
Sbjct: 121 YRIIRCGGAVDDDMANIIVAQLLYLDAVDPNKDIVMYVNSPGGSVTAGMAIFDTMRHIRP 180

Query: 235 DVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLYH 294
           DVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEML+H
Sbjct: 181 DVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLHH 240

Query: 295 KANLNGYLSYHTGQSLEKINEDTDRDFFMSAKEAEEYGLIDGVIMNPLKAFQPLAAAAST 354
           KANLNGYLSYHTGQSLEKIN+DTDRDFFMSAKEA++YGLIDGVIMNPLKA QPLAAAAST
Sbjct: 241 KANLNGYLSYHTGQSLEKINQDTDRDFFMSAKEAKDYGLIDGVIMNPLKALQPLAAAAST 300

Query: 355 ENEP 359
           E++P
Sbjct: 301 EDKP 304

[Close]

BLAST of CmoCh01G002940 vs. NCBI nr
Match: XP_022948813.1 (ATP-dependent Clp protease proteolytic subunit 5, chloroplastic [Cucurbita moschata])

HSP 1 Score: 607.8 bits (1566), Expect = 5.9e-170
Identity = 306/306 (100.00%), Postives = 306/306 (100.00%), Query Frame = 0


Query: 55  MAHTFTYTSASSFRLNSLVSVPNSSSSSESQKLFLPLENFHSRKLGKFVGGGRNLKNSPV 114
           MAHTFTYTSASSFRLNSLVSVPNSSSSSESQKLFLPLENFHSRKLGKFVGGGRNLKNSPV
Sbjct: 1   MAHTFTYTSASSFRLNSLVSVPNSSSSSESQKLFLPLENFHSRKLGKFVGGGRNLKNSPV 60

Query: 115 KAIYSGEFSSLDKSSRRGLWSIRDDVQIPSSPYFPTYAQGQGPPPMVQERFQSVISQLFQ 174
           KAIYSGEFSSLDKSSRRGLWSIRDDVQIPSSPYFPTYAQGQGPPPMVQERFQSVISQLFQ
Sbjct: 61  KAIYSGEFSSLDKSSRRGLWSIRDDVQIPSSPYFPTYAQGQGPPPMVQERFQSVISQLFQ 120

Query: 175 HRIVRCGGAVDDDMANIIVAQLLYLDAVDPNKDIILYVNSPGGSVTAGMAIFDTMRHIRP 234
           HRIVRCGGAVDDDMANIIVAQLLYLDAVDPNKDIILYVNSPGGSVTAGMAIFDTMRHIRP
Sbjct: 121 HRIVRCGGAVDDDMANIIVAQLLYLDAVDPNKDIILYVNSPGGSVTAGMAIFDTMRHIRP 180

Query: 235 DVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLYH 294
           DVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLYH
Sbjct: 181 DVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLYH 240

Query: 295 KANLNGYLSYHTGQSLEKINEDTDRDFFMSAKEAEEYGLIDGVIMNPLKAFQPLAAAAST 354
           KANLNGYLSYHTGQSLEKINEDTDRDFFMSAKEAEEYGLIDGVIMNPLKAFQPLAAAAST
Sbjct: 241 KANLNGYLSYHTGQSLEKINEDTDRDFFMSAKEAEEYGLIDGVIMNPLKAFQPLAAAAST 300

Query: 355 ENEPGS 361
           ENEPGS
Sbjct: 301 ENEPGS 306

[Close]

BLAST of CmoCh01G002940 vs. NCBI nr
Match: XP_023525499.1 (ATP-dependent Clp protease proteolytic subunit 5, chloroplastic-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 604.7 bits (1558), Expect = 5.0e-169
Identity = 304/306 (99.35%), Postives = 305/306 (99.67%), Query Frame = 0


Query: 55  MAHTFTYTSASSFRLNSLVSVPNSSSSSESQKLFLPLENFHSRKLGKFVGGGRNLKNSPV 114
           MAHTFTYTSASSFRLNSLVSVPN SSSSESQKLFLPLENFHSRKLGKFVGGGRNLKNSPV
Sbjct: 1   MAHTFTYTSASSFRLNSLVSVPNPSSSSESQKLFLPLENFHSRKLGKFVGGGRNLKNSPV 60

Query: 115 KAIYSGEFSSLDKSSRRGLWSIRDDVQIPSSPYFPTYAQGQGPPPMVQERFQSVISQLFQ 174
           KAIYSGEFSSLDKSSRRGLWSIRDDVQIPSSPYFPTYAQGQGPPPMVQERFQSVISQLFQ
Sbjct: 61  KAIYSGEFSSLDKSSRRGLWSIRDDVQIPSSPYFPTYAQGQGPPPMVQERFQSVISQLFQ 120

Query: 175 HRIVRCGGAVDDDMANIIVAQLLYLDAVDPNKDIILYVNSPGGSVTAGMAIFDTMRHIRP 234
           HRIVRCGGAVDDDMANIIVAQLLYLDAVDPNKDIILYVNSPGGSVTAGMAIFDTMRHIRP
Sbjct: 121 HRIVRCGGAVDDDMANIIVAQLLYLDAVDPNKDIILYVNSPGGSVTAGMAIFDTMRHIRP 180

Query: 235 DVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLYH 294
           DVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLYH
Sbjct: 181 DVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLYH 240

Query: 295 KANLNGYLSYHTGQSLEKINEDTDRDFFMSAKEAEEYGLIDGVIMNPLKAFQPLAAAAST 354
           KANLNGYLSYHTGQSLEKINEDTDRDFFMSAKEAEEYGLIDGVIMNPLKAFQPLAAAAST
Sbjct: 241 KANLNGYLSYHTGQSLEKINEDTDRDFFMSAKEAEEYGLIDGVIMNPLKAFQPLAAAAST 300

Query: 355 ENEPGS 361
           ENEPG+
Sbjct: 301 ENEPGA 306

[Close]

BLAST of CmoCh01G002940 vs. NCBI nr
Match: KAG7036637.1 (ATP-dependent Clp protease proteolytic subunit 5, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 602.8 bits (1553), Expect = 1.9e-168
Identity = 303/306 (99.02%), Postives = 305/306 (99.67%), Query Frame = 0


Query: 55  MAHTFTYTSASSFRLNSLVSVPNSSSSSESQKLFLPLENFHSRKLGKFVGGGRNLKNSPV 114
           MAHTFTYTSASSFRLNSLVSVPNSSSSSESQKLFLPLENFHSRKLGK VGGGRNLKNSPV
Sbjct: 1   MAHTFTYTSASSFRLNSLVSVPNSSSSSESQKLFLPLENFHSRKLGKLVGGGRNLKNSPV 60

Query: 115 KAIYSGEFSSLDKSSRRGLWSIRDDVQIPSSPYFPTYAQGQGPPPMVQERFQSVISQLFQ 174
           KAIYSGEFSSLDKSSR+GLWSIRDDVQIPSSPYFPTYAQGQGPPPMVQERFQSVISQLFQ
Sbjct: 61  KAIYSGEFSSLDKSSRQGLWSIRDDVQIPSSPYFPTYAQGQGPPPMVQERFQSVISQLFQ 120

Query: 175 HRIVRCGGAVDDDMANIIVAQLLYLDAVDPNKDIILYVNSPGGSVTAGMAIFDTMRHIRP 234
           HRIVRCGGAVDDDMANIIVAQLLYLDAVDPNKDIILYVNSPGGSVTAGMAIFDTMRHIRP
Sbjct: 121 HRIVRCGGAVDDDMANIIVAQLLYLDAVDPNKDIILYVNSPGGSVTAGMAIFDTMRHIRP 180

Query: 235 DVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLYH 294
           DVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLYH
Sbjct: 181 DVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLYH 240

Query: 295 KANLNGYLSYHTGQSLEKINEDTDRDFFMSAKEAEEYGLIDGVIMNPLKAFQPLAAAAST 354
           KANLNGYLSYHTGQSLEKINEDTDRDFFMSAKEAEEYGLIDGVIMNPLKAFQPLAAAAST
Sbjct: 241 KANLNGYLSYHTGQSLEKINEDTDRDFFMSAKEAEEYGLIDGVIMNPLKAFQPLAAAAST 300

Query: 355 ENEPGS 361
           ENEPG+
Sbjct: 301 ENEPGA 306

[Close]

BLAST of CmoCh01G002940 vs. NCBI nr
Match: XP_023525498.1 (ATP-dependent Clp protease proteolytic subunit 5, chloroplastic-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 602.8 bits (1553), Expect = 1.9e-168
Identity = 303/306 (99.02%), Postives = 304/306 (99.35%), Query Frame = 0


Query: 55  MAHTFTYTSASSFRLNSLVSVPNSSSSSESQKLFLPLENFHSRKLGKFVGGGRNLKNSPV 114
           MAHTFTYTSASSFRLNSLV VPN SSSSESQKLFLPLENFHSRKLGKFVGGGRNLKNSPV
Sbjct: 1   MAHTFTYTSASSFRLNSLVPVPNPSSSSESQKLFLPLENFHSRKLGKFVGGGRNLKNSPV 60

Query: 115 KAIYSGEFSSLDKSSRRGLWSIRDDVQIPSSPYFPTYAQGQGPPPMVQERFQSVISQLFQ 174
           KAIYSGEFSSLDKSSRRGLWSIRDDVQIPSSPYFPTYAQGQGPPPMVQERFQSVISQLFQ
Sbjct: 61  KAIYSGEFSSLDKSSRRGLWSIRDDVQIPSSPYFPTYAQGQGPPPMVQERFQSVISQLFQ 120

Query: 175 HRIVRCGGAVDDDMANIIVAQLLYLDAVDPNKDIILYVNSPGGSVTAGMAIFDTMRHIRP 234
           HRIVRCGGAVDDDMANIIVAQLLYLDAVDPNKDIILYVNSPGGSVTAGMAIFDTMRHIRP
Sbjct: 121 HRIVRCGGAVDDDMANIIVAQLLYLDAVDPNKDIILYVNSPGGSVTAGMAIFDTMRHIRP 180

Query: 235 DVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLYH 294
           DVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLYH
Sbjct: 181 DVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLYH 240

Query: 295 KANLNGYLSYHTGQSLEKINEDTDRDFFMSAKEAEEYGLIDGVIMNPLKAFQPLAAAAST 354
           KANLNGYLSYHTGQSLEKINEDTDRDFFMSAKEAEEYGLIDGVIMNPLKAFQPLAAAAST
Sbjct: 241 KANLNGYLSYHTGQSLEKINEDTDRDFFMSAKEAEEYGLIDGVIMNPLKAFQPLAAAAST 300

Query: 355 ENEPGS 361
           ENEPG+
Sbjct: 301 ENEPGA 306

[Close]

BLAST of CmoCh01G002940 vs. NCBI nr
Match: XP_022998282.1 (ATP-dependent Clp protease proteolytic subunit 5, chloroplastic [Cucurbita maxima])

HSP 1 Score: 597.8 bits (1540), Expect = 6.1e-167
Identity = 300/304 (98.68%), Postives = 303/304 (99.67%), Query Frame = 0


Query: 55  MAHTFTYTSASSFRLNSLVSVPNSSSSSESQKLFLPLENFHSRKLGKFVGGGRNLKNSPV 114
           MAHTFTYTSASSFRLNSLVSVPNSSSSS+SQKLFLPLENFHSRKLGK VGGGRNLKNSPV
Sbjct: 1   MAHTFTYTSASSFRLNSLVSVPNSSSSSDSQKLFLPLENFHSRKLGKLVGGGRNLKNSPV 60

Query: 115 KAIYSGEFSSLDKSSRRGLWSIRDDVQIPSSPYFPTYAQGQGPPPMVQERFQSVISQLFQ 174
           KAIYSGEFSSLDKSSR+GLWSIRDDVQIPSSPYFPTYAQGQGPPPMVQERFQSVISQLFQ
Sbjct: 61  KAIYSGEFSSLDKSSRQGLWSIRDDVQIPSSPYFPTYAQGQGPPPMVQERFQSVISQLFQ 120

Query: 175 HRIVRCGGAVDDDMANIIVAQLLYLDAVDPNKDIILYVNSPGGSVTAGMAIFDTMRHIRP 234
           HRIVRCGGAVDDDMANIIVAQLLYLDAVDPNKDIILYVNSPGGSVTAGMAIFDTMRHIRP
Sbjct: 121 HRIVRCGGAVDDDMANIIVAQLLYLDAVDPNKDIILYVNSPGGSVTAGMAIFDTMRHIRP 180

Query: 235 DVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLYH 294
           DVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLYH
Sbjct: 181 DVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLYH 240

Query: 295 KANLNGYLSYHTGQSLEKINEDTDRDFFMSAKEAEEYGLIDGVIMNPLKAFQPLAAAAST 354
           KANLNGYLSYHTGQSLEKINEDTDRDFFMSAKEAEEYGLIDGVIMNPLKAFQPLAAAAST
Sbjct: 241 KANLNGYLSYHTGQSLEKINEDTDRDFFMSAKEAEEYGLIDGVIMNPLKAFQPLAAAAST 300

Query: 355 ENEP 359
           EN+P
Sbjct: 301 ENKP 304

[Close]

BLAST of CmoCh01G002940 vs. TAIR 10
Match: AT1G02560.1 (nuclear encoded CLP protease 5 )

HSP 1 Score: 472.6 bits (1215), Expect = 2.8e-133
Identity = 239/298 (80.20%), Postives = 259/298 (86.91%), Query Frame = 0


Query: 55  MAHTFTYTSASSFRLNS-LVSVPNSSSSSESQKLFLPLENFHSRKLGKFVGGGRNLKNSP 114
           MAH    TSASS R  +  VS   + SS +S KL LP E   SRK  K V   +N KNS 
Sbjct: 1   MAHACVSTSASSLRFTAGFVSASPNGSSFDSPKLSLPFEPLRSRKTNKLVSDRKNWKNST 60

Query: 115 VKAIYSGEFSSLDKSSRRGLWSIRDDVQIPSSPYFPTYAQGQGPPPMVQERFQSVISQLF 174
            KA+YSG   + +  S +G+WSIRDD+Q+PSSPYFP YAQGQGPPPMVQERFQS+ISQLF
Sbjct: 61  PKAVYSGNLWTPEIPSPQGVWSIRDDLQVPSSPYFPAYAQGQGPPPMVQERFQSIISQLF 120

Query: 175 QHRIVRCGGAVDDDMANIIVAQLLYLDAVDPNKDIILYVNSPGGSVTAGMAIFDTMRHIR 234
           Q+RI+RCGGAVDDDMANIIVAQLLYLDAVDP KDI++YVNSPGGSVTAGMAIFDTMRHIR
Sbjct: 121 QYRIIRCGGAVDDDMANIIVAQLLYLDAVDPTKDIVMYVNSPGGSVTAGMAIFDTMRHIR 180

Query: 235 PDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLY 294
           PDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEML+
Sbjct: 181 PDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLH 240

Query: 295 HKANLNGYLSYHTGQSLEKINEDTDRDFFMSAKEAEEYGLIDGVIMNPLKAFQPLAAA 352
           HKANLNGYL+YHTGQSLEKIN+DTDRDFFMSAKEA+EYGLIDGVIMNPLKA QPLAAA
Sbjct: 241 HKANLNGYLAYHTGQSLEKINQDTDRDFFMSAKEAKEYGLIDGVIMNPLKALQPLAAA 298

[Close]

BLAST of CmoCh01G002940 vs. TAIR 10
Match: AT1G66670.1 (CLP protease proteolytic subunit 3 )

HSP 1 Score: 199.5 bits (506), Expect = 4.5e-51
Identity = 109/215 (50.70%), Postives = 142/215 (66.05%), Query Frame = 0


Query: 124 SLDKSSRRGLWSIRDDVQIPSSPYFPTYAQGQGPPPMVQERFQSVISQLFQHRIVRCGGA 183
           SL K  R+ L S  D     SS    + AQ     P  +E      + L + RIV  G  
Sbjct: 48  SLSKPPRQTLSSNWD----VSSFSIDSVAQSPSRLPSFEE--LDTTNMLLRQRIVFLGSQ 107

Query: 184 VDDDMANIIVAQLLYLDAVDPNKDIILYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGL 243
           VDD  A+++++QLL LDA D  +DI L++NSPGGS+TAGM I+D M+  + DVSTVC+GL
Sbjct: 108 VDDMTADLVISQLLLLDAEDSERDITLFINSPGGSITAGMGIYDAMKQCKADVSTVCLGL 167

Query: 244 AASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLYHKANLNGYLS 303
           AASMGAFLL++G+KGKRY +PNS++MIHQPLG A G  T++ I+  EM+YHK  LN   S
Sbjct: 168 AASMGAFLLASGSKGKRYCMPNSKVMIHQPLGTAGGKATEMSIRIREMMYHKIKLNKIFS 227

Query: 304 YHTGQSLEKINEDTDRDFFMSAKEAEEYGLIDGVI 339
             TG+   +I  DTDRD F++  EA+EYGLID VI
Sbjct: 228 RITGKPESEIESDTDRDNFLNPWEAKEYGLIDAVI 256

[Close]

BLAST of CmoCh01G002940 vs. TAIR 10
Match: AT5G45390.1 (CLP protease P4 )

HSP 1 Score: 188.7 bits (478), Expect = 8.0e-48
Identity = 91/171 (53.22%), Postives = 130/171 (76.02%), Query Frame = 0


Query: 168 VISQLFQHRIVRCGGAVDDDMANIIVAQLLYLDAVDPNKDIILYVNSPGGSVTAGMAIFD 227
           V+  L + RIV  G ++DD +A+ I++QLL LDA DP KDI L++NSPGGS++A MAI+D
Sbjct: 80  VMGLLLRERIVFLGSSIDDFVADAIMSQLLLLDAKDPKKDIKLFINSPGGSLSATMAIYD 139

Query: 228 TMRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQ 287
            ++ +R DVST+ +G+AAS  + +L AGTKGKR+++PN+RIMIHQPLGGA G   D++IQ
Sbjct: 140 VVQLVRADVSTIALGIAASTASIILGAGTKGKRFAMPNTRIMIHQPLGGASGQAIDVEIQ 199

Query: 288 ANEMLYHKANLNGYLSYHTGQSLEKINEDTDRDFFMSAKEAEEYGLIDGVI 339
           A E++++K N+   ++  T +S E++ +D DRD +MS  EA EYGLIDGVI
Sbjct: 200 AKEVMHNKNNVTSIIAGCTSRSFEQVLKDIDRDRYMSPIEAVEYGLIDGVI 250

[Close]

BLAST of CmoCh01G002940 vs. TAIR 10
Match: AT5G23140.1 (nuclear-encoded CLP protease P7 )

HSP 1 Score: 176.8 bits (447), Expect = 3.1e-44
Identity = 85/176 (48.30%), Postives = 124/176 (70.45%), Query Frame = 0


Query: 163 ERFQSVISQLFQHRIVRCGGAVDDDMANIIVAQLLYLDAVDPNKDIILYVNSPGGSVTAG 222
           ER   + S+L + RI+   G ++DD ++++VAQLLYL++ +P+K I +Y+NSPGG VTAG
Sbjct: 44  ERAYDIFSRLLKERIICINGPINDDTSHVVVAQLLYLESENPSKPIHMYLNSPGGHVTAG 103

Query: 223 MAIFDTMRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQT 282
           +AI+DTM++IR  +ST+C+G AASM + LL+AG KG+R SLPN+ +MIHQP GG  G   
Sbjct: 104 LAIYDTMQYIRSPISTICLGQAASMASLLLAAGAKGQRRSLPNATVMIHQPSGGYSGQAK 163

Query: 283 DIDIQANEMLYHKANLNGYLSYHTGQSLEKINEDTDRDFFMSAKEAEEYGLIDGVI 339
           DI I   +++     LN     HTGQ L+ +  + DRD FM+ +EA+ +G+ID VI
Sbjct: 164 DITIHTKQIVRVWDALNELYVKHTGQPLDVVANNMDRDHFMTPEEAKAFGIIDEVI 219

[Close]

BLAST of CmoCh01G002940 vs. TAIR 10
Match: AT1G11750.1 (CLP protease proteolytic subunit 6 )

HSP 1 Score: 158.7 bits (400), Expect = 8.9e-39
Identity = 89/237 (37.55%), Postives = 137/237 (57.81%), Query Frame = 0


Query: 110 KNSPVKAIYSGEFSSLDKSSRRGLWSIRDDVQIP---SSPYFPTYAQGQGPPPMVQERFQ 169
           + +P++ I S   S    S + GL S      I     +P F      +G PP++     
Sbjct: 31  QRNPIRRIVSALQSPYGDSLKAGLSSNVSGSPIKIDNKAPRFGVIEAKKGNPPVMPSVMT 90

Query: 170 -----SVISQLFQHRIVRCGGAVDDDMANIIVAQLLYLDAVDPNKDIILYVNSPGGSVTA 229
                 + S LF++RI+  G  ++  +A  +++QL+ L ++D   DI++Y+N PGGS  +
Sbjct: 91  PGGPLDLSSVLFRNRIIFIGQPINAQVAQRVISQLVTLASIDDKSDILMYLNCPGGSTYS 150

Query: 230 GMAIFDTMRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQ 289
            +AI+D M  I+P V TV  G+AAS GA LL+ G KG RY++PN+R+MIHQP  G  G  
Sbjct: 151 VLAIYDCMSWIKPKVGTVAFGVAASQGALLLAGGEKGMRYAMPNTRVMIHQPQTGCGGHV 210

Query: 290 TDIDIQANEMLYHKANLNGYLSYHTGQSLEKINEDTDRDFFMSAKEAEEYGLIDGVI 339
            D+  Q NE +  +  ++   +  TGQ LEK+ + T+RD F+SA EA E+GLIDG++
Sbjct: 211 EDVRRQVNEAIEARQKIDRMYAAFTGQPLEKVQQYTERDRFLSASEALEFGLIDGLL 267

The following BLAST results are available for this feature:

BLAST of CmoCh01G002940 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9S834	3.9e-132	80.20	ATP-dependent Clp protease proteolytic subunit 5, chloroplastic OS=Arabidopsis t...	[more]
Q3MFR5	1.5e-67	68.45	ATP-dependent Clp protease proteolytic subunit 1 OS=Trichormus variabilis (strai...	[more]
Q8YXH5	3.4e-67	68.45	ATP-dependent Clp protease proteolytic subunit 1 OS=Nostoc sp. (strain PCC 7120 ...	[more]
Q2JIP1	3.5e-64	64.92	ATP-dependent Clp protease proteolytic subunit 2 OS=Synechococcus sp. (strain JA...	[more]
P54416	1.3e-63	66.13	ATP-dependent Clp protease proteolytic subunit 1 OS=Synechocystis sp. (strain PC...	[more]

BLAST of CmoCh01G002940 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GAD0	2.9e-170	100.00	ATP-dependent Clp protease proteolytic subunit OS=Cucurbita moschata OX=3662 GN=...	[more]
A0A6J1K7I3	3.0e-167	98.68	ATP-dependent Clp protease proteolytic subunit OS=Cucurbita maxima OX=3661 GN=LO...	[more]
A0A6J1DRD0	1.7e-159	93.14	ATP-dependent Clp protease proteolytic subunit OS=Momordica charantia OX=3673 GN...	[more]
A0A5A7TNH0	6.6e-159	92.11	ATP-dependent Clp protease proteolytic subunit OS=Cucumis melo var. makuwa OX=11...	[more]
A0A1S3BY88	6.6e-159	92.11	ATP-dependent Clp protease proteolytic subunit OS=Cucumis melo OX=3656 GN=LOC103...	[more]

BLAST of CmoCh01G002940 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022948813.1	5.9e-170	100.00	ATP-dependent Clp protease proteolytic subunit 5, chloroplastic [Cucurbita mosch...	[more]
XP_023525499.1	5.0e-169	99.35	ATP-dependent Clp protease proteolytic subunit 5, chloroplastic-like isoform X2 ...	[more]
KAG7036637.1	1.9e-168	99.02	ATP-dependent Clp protease proteolytic subunit 5, chloroplastic [Cucurbita argyr...	[more]
XP_023525498.1	1.9e-168	99.02	ATP-dependent Clp protease proteolytic subunit 5, chloroplastic-like isoform X1 ...	[more]
XP_022998282.1	6.1e-167	98.68	ATP-dependent Clp protease proteolytic subunit 5, chloroplastic [Cucurbita maxim...	[more]

BLAST of CmoCh01G002940 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G02560.1	2.8e-133	80.20	nuclear encoded CLP protease 5	[more]
AT1G66670.1	4.5e-51	50.70	CLP protease proteolytic subunit 3	[more]
AT5G45390.1	8.0e-48	53.22	CLP protease P4	[more]
AT5G23140.1	3.1e-44	48.30	nuclear-encoded CLP protease P7	[more]
AT1G11750.1	8.9e-39	37.55	CLP protease proteolytic subunit 6	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001907	ATP-dependent Clp protease proteolytic subunit	PRINTS	PR00127	CLPPROTEASEP	coord: 259..278 score: 64.62 coord: 167..182 score: 28.59 coord: 238..255 score: 66.67 coord: 207..227 score: 62.98 coord: 316..335 score: 64.75
IPR001907	ATP-dependent Clp protease proteolytic subunit	HAMAP	MF_00444	ClpP	coord: 144..341 score: 39.366367
IPR001907	ATP-dependent Clp protease proteolytic subunit	CDD	cd07017	S14_ClpP_2	coord: 168..337 e-value: 1.70116E-106 score: 307.831
None	No IPR available	GENE3D	3.90.226.10		coord: 158..341 e-value: 5.8E-80 score: 269.6
None	No IPR available	PANTHER	PTHR10381:SF12	ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT 5, CHLOROPLASTIC	coord: 87..353
IPR023562	Clp protease proteolytic subunit /Translocation-enhancing protein TepA	PFAM	PF00574	CLP_protease	coord: 162..340 e-value: 6.5E-79 score: 264.1
IPR023562	Clp protease proteolytic subunit /Translocation-enhancing protein TepA	PANTHER	PTHR10381	ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT	coord: 87..353
IPR018215	ClpP, Ser active site	PROSITE	PS00381	CLP_PROTEASE_SER	coord: 238..249
IPR033135	ClpP, histidine active site	PROSITE	PS00382	CLP_PROTEASE_HIS	coord: 260..273
IPR029045	ClpP/crotonase-like domain superfamily	SUPERFAMILY	52096	ClpP/crotonase	coord: 163..338

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh01G002940.1	CmoCh01G002940.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006515	protein quality control for misfolded or incompletely synthesized proteins
biological_process	GO:0006508	proteolysis
cellular_component	GO:0009840	chloroplastic endopeptidase Clp complex
cellular_component	GO:0009534	chloroplast thylakoid
cellular_component	GO:0009526	plastid envelope
molecular_function	GO:0051117	ATPase binding
molecular_function	GO:0004176	ATP-dependent peptidase activity
molecular_function	GO:0004252	serine-type endopeptidase activity