CmoCh01G002340 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ACCCATAAACTAAATAATATCAACACATGAACCAATACTCTCCCACTCCACTCATTCCCTTCCCCCGCTTGAAGCCAATTCTTCTGATCACTGCAAGTAGTAGGCCGCGACGGAGAGCAACGAAGCGCCGATGAGAGAGCCGATTGCCGGAAGGCCGGCGGTGGCGCCGCTGGTTGGTCCAGGTGCTGGAGCCGCTGCCTCATCATGAGCAACGACGGCGCTGACGGTTGCGGCAGCGAAGAGAATGGCGCAGGTGATCTTCTTCATCTCCATTGCGATTTTTTGTTGTTTGGTTGCGGCGTTATCCGGTGACGAGGAACTCGAACGATTCAACAATCACCGAAAACGCCTTCGCTTTGGAGATTGCTGCCTGATGAAATGATATGGAATCCATGGAATTTATAGGTGGAAACTCGAGCGATTTTCGGTAGATGGTTAGTTCCTCTATCCTTTGATCTTGAATTGCAGAGCTATAATTAGAAAAACCTTCCTGATTCACAGGGAAACCAGAAGAGGCCGATTCGTGGAGGGAAAATTAGGGAATTTTTGGAAATTGGGTTTGAAATTAAAAATTTTATTCTAAAATTCACAAGCTCTAATTTATATATTATTTATTTGTTGCAACATTCATTTTATATTTTTATGATTTTTTAGATAATTTAAGGCACTCTAAATTTAGGATCTATTATTGTATTTTCTAATTGATAAGGGACTGTATTTAATTACAAGATGTTACAATTATAAATTAGTTTGTGTTAATTTGTGTTTGAGTGATCATAATTTTTTTTTTTTGAATATTAAACTATTGTGTTTGAATGTTGATCTATTAACATGTTACTCTTACTCTTACTTAGTTCAGATGCTATTCTTCAATTCTCGCGAATTAGTCTAGAGAGCTGCCATTTTTTATAATTCATCAACATTACATCAATTAAGTTCGTTTGGATTGGGGGAGAAACATAGAAACAAAGAACAAAGTATCAAACATCAAATTACGAGCAAGATGCCAAGAAATCAGATCAGGAACTAAATTTTCCTATAAAATTTCTGAAATATATATGCATAAGCACAATTAAACTCTCGAACCAAAACACACATCCAAATCCTCAACTACACAGAAGAAGATTGAATTGAAGGAAAGGAACAGAGCATCTCTTAGTCTCTGCACATTTAACTCGAAATACAAGTGATTGAGTGAAGAGGAGAATACAAGTGATTGAGTGAAGGAGAAAGACAACTACTATCCCATTTAGCGAGAGTAAAGAAAAGAGAACAAAGAGACCAATAGCTGAATCACTTCAATCAGTTTCTGCCAAATGGCGTTGGCTAGTCGATTGCGATCCACCATCCCCGTCCTCAGCAAGTTTTTGAGAAATGAATCGTCCTGCACTCCGGTACTGGTACACCTACCACTCCTCGCTTATTTATCTTCTCAGTCGCTCATAGTTATTTCCGGTTTTGGATTGTGAATATGCTTATCCTTGGGTTTTTTTTTTTTGGCCTCATCGATGCCGGATTTGTGGCGAAATGTGGAGGTCTTGTATTCTATATTGTTGATTTAGGATTTTATGAATTTATTATCTATTTGGTCGCCTGGAAAAGAGAATCATGATCGGGGCGAGATAATGCTGATTATCTGAGCTTGTGCACTGTATATGTTGAATTCGCTTGATTTGGAACACATAGGGAATAGGTTTTTTGGTTACTTCTAGTGACAGGTTAGGATAGACGTGGAAGTTGTATAAACTGGTAAAATTAGGGAATAATGTTTTGGCTGGTGTTGCATTCTTAGCAAATAGGAAATGTCAGTTTTTTTTTTTTTTCCATGTTTAATCGAGGACTAAACAAATTTCATGAGGTATTTGCAGATTCTATTATCAGTTTTCCTTCTGAATCGGTTAATGCTGGTGTAAATAAAGCTGGTTTCTTGACCGTTTCTCTGATTTTGTATTGAGTATGGTTTATCACTTCAATAATGTGCTTATCAACTGGCTGCAGCTCTCAAGGACTTATGCCGCTACATCAGGGAAACATGAACAAAAGGTGAAGGTAGGTGAACAATTACTTTGGTTTCCTCATCATATTTTGTTTTCCCGAATAGATTTTCAGAATTACTATTAGATATCCTCTTTTGAACTCATAGTGCATGCGCCAGGTATGTTTCTTTCTGGAATTCTCATTTACAAGCGTGCTTTCTTATTTGCTGCATTTCAGGTGCCTCTTGCTTTGTTTGGAGGGTCTGGAAACTATGCCTCTGCTTTGTATATAGCTGCAATAAAAGCTAATTCTCTAGACAAGGTGGAGTCTGAGCTTTTTAACCTCGTTGAGGCTATTAAGAAAAGTCCTATATTTGCTCAGTTCACAATGGACCTGTCAGTTCCAGCGGAGACTAGAGTTAAAGCTATCAATGAAATTTCTGCTGAAGCAAAATTTTCAGACGTTGTTAAGAACTTTTTGGGTAGGATTGTTTACACTTTTTTAGTTGTGCGGATGAAAAATGTATTTTTCTTTTGGTTTTTGATATCAGTTATTACAATGCCTCCGTCTCACAATTGGGTCCACATCATGCTGAACAGTCTGTCTGTTAATGTGTATTTCTTTTTCTATGCCAATTGTCAAATCTTAATTGCATCATTTCATGTCCTATATAGATTTGGCTTGAGAGGTTTGAGGATTTTTGCCTTTCATGATTGAAGAAGTGAGTTTTATTCTATAGGATTTTTGAGATGGTTGATTCTGTTTTTTTTATTCCCTTGACTCAAGCAGTTACATTTGGTTCTAATGGCTGAAGTACTCATGCTGTGCAATCATTGATACTGGCAATTAAAATGCATCAATTCCAGGCTTACATGCATTCTCTTACCTGGAATTATTCTGATTATTTATTGTAGTTGTGTTGGCTGAGAATGGGAGGCTGAGATATATAGATAGCATAGCAAAGAGATTTTTGGAGTTGACTATGGCTCATAAGGGAGAAGTTAAAGCAGTTGTTACAACTGTTATTGTAAGTTTCTCTTTCACTTTCACTTTCCATTTTGTTTTATTTTATTTTATTTTTAAATCTAGGTAAAAATCAGATTCTTATCTATGAACTTCAGCGTGCAATGTGATCGAATACGTTTAGCATAAACTTATGCAAAAGTGATATTTATGTATAAAAGTATGACCTATTTAAATTCAGCAACTGATTTGTGGATGTCGTGGGATGCCTTTTCTATGTGTCTTGGGAGCCTTGTCAAATTCTTTACTTCCATTTTTATTTCTATTTTTAGCTTACTGATACTGGCAATTCGTTGATCACGGATGAAAATGTCAAGAGACAATACTTGAAGTAAATGTAATGACATTTAAAATTAGAGGGTTTTTATTGAAGTAGTACTCGATGCACATGATAACTGATTGGTTTTTTACCAGCCCATTCCACCACAAGAAGAGAACGAACTGAAGGAGACATTGCAAGATATTATTGGACAAGGCAAGAAGGTTAAGCTCGAGCAAAAGGTACGTCGGTTGGAAATGTTTTAGGTTTTGAATTTTGTGAATGTAGCTGCATGCCTTTTGAGAAATTCTAACCGTGCTTTTGTATTTGCCAGATTGATCCCAGCATACTTGGTGGTCTAATTGTAGAATTCAGCGAGAAAGTATTTGACGTGTCTATTAAAACCCGGGCACGTCAAATGGAGAGGTTCTTGCGCCAACCTGTTACTCTTGATGGCCTCTAGAAGGATGTTTAACTTCTGTGTCACAATGTCATCATCCGAAGCTATTTGACATCTTTTTTTTCTTTTTCCTCGATTATTTTTGTTGCATTTTTACCTCAACTTGATATGATGGTACACCACCATCTAGATGGAAATAAGAGTTTCAGCTTTTTATGTAGATTATAATCTTGTAAGAGTTACTTGGTTTAAGAGTATCTTATTCCTGGATACTAAGTTTACTCCCAAATAACGACCAGTCTAACGTTATCAACAGAGTCTTGGCTTCATATCTTACTGTCCCATTGTTCCTTTGAGTTTGAAATAAAGATTGTTCTGTGATTGCTTCCTTTTGTTATGGAACCATCACTAAAAACAACAAATTCAACATATGGTGCTATTTGAAATTGCTTCCGGA ACCCATAAACTAAATAATATCAACACATGAACCAATACTCTCCCACTCCACTCATTCCCTTCCCCCGCTTGAAGCCAATTCTTCTGATCACTGCAAGTAGTAGGCCGCGACGGAGAGCAACGAAGCGCCGATGAGAGAGCCGATTGCCGGAAGGCCGGCGGTGGCGCCGCTGGTTGGTCCAGGTGCTGGAGCCGCTGCCTCATCATGAGCAACGACGGCGCTGACGGTTGCGGCAGCGAAGAGAATGGCGCAGGTGGAAACTCGAGCGATTTTCGGTAGATGTTCAGATGCTATTCTTCAATTCTCGCGAATTAGTCTAGAGAGCTGCCATTTTTTATAATTCATCAACATTACATCAATTAAGTTCGTTTGGATTGGGGGAGAAACATAGAAACAAAGAACAAAGTATCAAACATCAAATTACGAGCAAGATGCCAAGAAATCAGATCAGGAACTAAATTTTCCTATAAAATTTCTGAAATATATATGCATAAGCACAATTAAACTCTCGAACCAAAACACACATCCAAATCCTCAACTACACAGAAGAAGATTGAATTGAAGGAAAGGAACAGAGCATCTCTTAGTCTCTGCACATTTAACTCGAAATACAAGTGATTGAGTGAAGAGGAGAATACAAGTGATTGAGTGAAGGAGAAAGACAACTACTATCCCATTTAGCGAGAGTAAAGAAAAGAGAACAAAGAGACCAATAGCTGAATCACTTCAATCAGTTTCTGCCAAATGGCGTTGGCTAGTCGATTGCGATCCACCATCCCCGTCCTCAGCAAGTTTTTGAGAAATGAATCGTCCTGCACTCCGGTACTGCTCTCAAGGACTTATGCCGCTACATCAGGGAAACATGAACAAAAGGTGAAGGTGCCTCTTGCTTTGTTTGGAGGGTCTGGAAACTATGCCTCTGCTTTGTATATAGCTGCAATAAAAGCTAATTCTCTAGACAAGGTGGAGTCTGAGCTTTTTAACCTCGTTGAGGCTATTAAGAAAAGTCCTATATTTGCTCAGTTCACAATGGACCTGTCAGTTCCAGCGGAGACTAGAGTTAAAGCTATCAATGAAATTTCTGCTGAAGCAAAATTTTCAGACGTTGTTAAGAACTTTTTGGTTGTGTTGGCTGAGAATGGGAGGCTGAGATATATAGATAGCATAGCAAAGAGATTTTTGGAGTTGACTATGGCTCATAAGGGAGAAGTTAAAGCAGTTGTTACAACTGTTATTCCCATTCCACCACAAGAAGAGAACGAACTGAAGGAGACATTGCAAGATATTATTGGACAAGGCAAGAAGGTTAAGCTCGAGCAAAAGATTGATCCCAGCATACTTGGTGGTCTAATTGTAGAATTCAGCGAGAAAGTATTTGACGTGTCTATTAAAACCCGGGCACGTCAAATGGAGAGGTTCTTGCGCCAACCTGTTACTCTTGATGGCCTCTAGAAGGATGTTTAACTTCTGTGTCACAATGTCATCATCCGAAGCTATTTGACATCTTTTTTTTCTTTTTCCTCGATTATTTTTGTTGCATTTTTACCTCAACTTGATATGATGGTACACCACCATCTAGATGGAAATAAGAGTTTCAGCTTTTTATGTAGATTATAATCTTGTAAGAGTTACTTGGTTTAAGAGTATCTTATTCCTGGATACTAAGTTTACTCCCAAATAACGACCAGTCTAACGTTATCAACAGAGTCTTGGCTTCATATCTTACTGTCCCATTGTTCCTTTGAGTTTGAAATAAAGATTGTTCTGTGATTGCTTCCTTTTGTTATGGAACCATCACTAAAAACAACAAATTCAACATATGGTGCTATTTGAAATTGCTTCCGGA ATGGCGTTGGCTAGTCGATTGCGATCCACCATCCCCGTCCTCAGCAAGTTTTTGAGAAATGAATCGTCCTGCACTCCGGTACTGCTCTCAAGGACTTATGCCGCTACATCAGGGAAACATGAACAAAAGGTGAAGGTGCCTCTTGCTTTGTTTGGAGGGTCTGGAAACTATGCCTCTGCTTTGTATATAGCTGCAATAAAAGCTAATTCTCTAGACAAGGTGGAGTCTGAGCTTTTTAACCTCGTTGAGGCTATTAAGAAAAGTCCTATATTTGCTCAGTTCACAATGGACCTGTCAGTTCCAGCGGAGACTAGAGTTAAAGCTATCAATGAAATTTCTGCTGAAGCAAAATTTTCAGACGTTGTTAAGAACTTTTTGGTTGTGTTGGCTGAGAATGGGAGGCTGAGATATATAGATAGCATAGCAAAGAGATTTTTGGAGTTGACTATGGCTCATAAGGGAGAAGTTAAAGCAGTTGTTACAACTGTTATTCCCATTCCACCACAAGAAGAGAACGAACTGAAGGAGACATTGCAAGATATTATTGGACAAGGCAAGAAGGTTAAGCTCGAGCAAAAGATTGATCCCAGCATACTTGGTGGTCTAATTGTAGAATTCAGCGAGAAAGTATTTGACGTGTCTATTAAAACCCGGGCACGTCAAATGGAGAGGTTCTTGCGCCAACCTGTTACTCTTGATGGCCTCTAG MALASRLRSTIPVLSKFLRNESSCTPVLLSRTYAATSGKHEQKVKVPLALFGGSGNYASALYIAAIKANSLDKVESELFNLVEAIKKSPIFAQFTMDLSVPAETRVKAINEISAEAKFSDVVKNFLVVLAENGRLRYIDSIAKRFLELTMAHKGEVKAVVTTVIPIPPQEENELKETLQDIIGQGKKVKLEQKIDPSILGGLIVEFSEKVFDVSIKTRARQMERFLRQPVTLDGL Homology
BLAST of CmoCh01G002340 vs. ExPASy Swiss-Prot
Match: P22778 (ATP synthase subunit O, mitochondrial OS=Ipomoea batatas OX=4120 PE=1 SV=1) HSP 1 Score: 280.4 bits (716), Expect = 1.9e-74 Identity = 150/242 (61.98%), Postives = 185/242 (76.45%), Query Frame = 0
BLAST of CmoCh01G002340 vs. ExPASy Swiss-Prot
Match: Q96251 (ATP synthase subunit O, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g13450 PE=1 SV=2) HSP 1 Score: 248.4 bits (633), Expect = 7.8e-65 Identity = 133/240 (55.42%), Postives = 175/240 (72.92%), Query Frame = 0
BLAST of CmoCh01G002340 vs. ExPASy Swiss-Prot
Match: Q5RD23 (ATP synthase subunit O, mitochondrial OS=Pongo abelii OX=9601 GN=ATP5PO PE=2 SV=1) HSP 1 Score: 136.3 bits (342), Expect = 4.3e-31 Identity = 74/185 (40.00%), Postives = 114/185 (61.62%), Query Frame = 0
BLAST of CmoCh01G002340 vs. ExPASy Swiss-Prot
Match: P48047 (ATP synthase subunit O, mitochondrial OS=Homo sapiens OX=9606 GN=ATP5PO PE=1 SV=1) HSP 1 Score: 135.6 bits (340), Expect = 7.4e-31 Identity = 74/187 (39.57%), Postives = 114/187 (60.96%), Query Frame = 0
BLAST of CmoCh01G002340 vs. ExPASy Swiss-Prot
Match: Q2EN81 (ATP synthase subunit O, mitochondrial OS=Sus scrofa OX=9823 GN=ATP5PO PE=1 SV=1) HSP 1 Score: 132.1 bits (331), Expect = 8.2e-30 Identity = 72/185 (38.92%), Postives = 112/185 (60.54%), Query Frame = 0
BLAST of CmoCh01G002340 vs. ExPASy TrEMBL
Match: A0A6J1GCR6 (ATP synthase subunit O, mitochondrial-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111452782 PE=3 SV=1) HSP 1 Score: 441.0 bits (1133), Expect = 3.0e-120 Identity = 235/235 (100.00%), Postives = 235/235 (100.00%), Query Frame = 0
BLAST of CmoCh01G002340 vs. ExPASy TrEMBL
Match: A0A6J1GC08 (ATP synthase subunit O, mitochondrial-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111452782 PE=3 SV=1) HSP 1 Score: 433.0 bits (1112), Expect = 8.3e-118 Identity = 233/235 (99.15%), Postives = 233/235 (99.15%), Query Frame = 0
BLAST of CmoCh01G002340 vs. ExPASy TrEMBL
Match: A0A6J1KAB8 (ATP synthase subunit O, mitochondrial-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111493106 PE=3 SV=1) HSP 1 Score: 415.2 bits (1066), Expect = 1.8e-112 Identity = 220/232 (94.83%), Postives = 228/232 (98.28%), Query Frame = 0
BLAST of CmoCh01G002340 vs. ExPASy TrEMBL
Match: A0A6J1K855 (ATP synthase subunit O, mitochondrial-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111493106 PE=3 SV=1) HSP 1 Score: 407.1 bits (1045), Expect = 4.9e-110 Identity = 218/232 (93.97%), Postives = 226/232 (97.41%), Query Frame = 0
BLAST of CmoCh01G002340 vs. ExPASy TrEMBL
Match: A0A6J1J6D8 (ATP synthase subunit O, mitochondrial-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111482174 PE=3 SV=1) HSP 1 Score: 402.1 bits (1032), Expect = 1.6e-108 Identity = 212/235 (90.21%), Postives = 221/235 (94.04%), Query Frame = 0
BLAST of CmoCh01G002340 vs. NCBI nr
Match: XP_022949435.1 (ATP synthase subunit O, mitochondrial-like isoform X1 [Cucurbita moschata]) HSP 1 Score: 441.0 bits (1133), Expect = 6.3e-120 Identity = 235/235 (100.00%), Postives = 235/235 (100.00%), Query Frame = 0
BLAST of CmoCh01G002340 vs. NCBI nr
Match: XP_022949436.1 (ATP synthase subunit O, mitochondrial-like isoform X2 [Cucurbita moschata]) HSP 1 Score: 433.0 bits (1112), Expect = 1.7e-117 Identity = 233/235 (99.15%), Postives = 233/235 (99.15%), Query Frame = 0
BLAST of CmoCh01G002340 vs. NCBI nr
Match: XP_023525826.1 (ATP synthase subunit O, mitochondrial-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023525827.1 ATP synthase subunit O, mitochondrial-like isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 425.2 bits (1092), Expect = 3.6e-115 Identity = 224/235 (95.32%), Postives = 232/235 (98.72%), Query Frame = 0
BLAST of CmoCh01G002340 vs. NCBI nr
Match: XP_023525828.1 (ATP synthase subunit O, mitochondrial-like isoform X3 [Cucurbita pepo subsp. pepo] >XP_023525830.1 ATP synthase subunit O, mitochondrial-like isoform X4 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 417.2 bits (1071), Expect = 9.7e-113 Identity = 222/235 (94.47%), Postives = 230/235 (97.87%), Query Frame = 0
BLAST of CmoCh01G002340 vs. NCBI nr
Match: XP_022998491.1 (ATP synthase subunit O, mitochondrial-like isoform X1 [Cucurbita maxima]) HSP 1 Score: 415.2 bits (1066), Expect = 3.7e-112 Identity = 220/232 (94.83%), Postives = 228/232 (98.28%), Query Frame = 0
BLAST of CmoCh01G002340 vs. TAIR 10
Match: AT5G13450.1 (delta subunit of Mt ATP synthase ) HSP 1 Score: 248.4 bits (633), Expect = 5.5e-66 Identity = 133/240 (55.42%), Postives = 175/240 (72.92%), Query Frame = 0
BLAST of CmoCh01G002340 vs. TAIR 10
Match: AT5G13450.2 (delta subunit of Mt ATP synthase ) HSP 1 Score: 179.1 bits (453), Expect = 4.1e-45 Identity = 88/143 (61.54%), Postives = 115/143 (80.42%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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