CmoCh01G002280 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh01G002280
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Ras-related protein
Location	Cmo_Chr01: 1020568 .. 1023471 (-)
RNA-Seq Expression	CmoCh01G002280
Synteny	CmoCh01G002280

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTGGTCCATGTCAACGTTGACCATTGGTAAGGGAACAACGGAAGGAAGAAGAAGAAAAATCGTGGCTGCTCCGTCTCTCTTCTTCCCTCTGCTTTCGTCCATGTCAAAAACATTTTCGCTTCTTCTTTTCAACTCTTCGCTAAACCCTATTTTCCCTTGATTTTCCTTCTCTCCAAACACAATCCTTCCTCCATTTCCCTTTGTGTTCTACTCAACTGCAAACTAGTAGCATCAAAATCCCCTCGCAATCGCATCAAGCGATCGTTTGGTGTTCGAGTTTAACCTCTTTTTACGTTTTTTGTTTTTGACGATTGGATTAGATTTTGATTCTTTCGTTTGAGATATGTCTAATTTGCAATCGAATTTCAATCAGAAGATTGATTATGTTTTCAAGGTCGTGTTGATCGGAGATTCTGCGGTGGGGAAATCGCAACTTCTCTCCCGTTTTACTAGGAATGAGTTTAGTTTGGATTCGAAGGCGACTATCGGGGTTGAGTTTCAGACGAAGACGCTTGTTATTGACCAGAAGGCTATCAAGGCGCAGATATGGGATACTGCTGGTCAGGAGAGGTACTCAAACAAACTTCCATGTTTTTCTTAAGGATTTCTTTCCTGTTTCAACGATTCTCAATTAGGCTTTTGAATATGAACATCTTTGCTATAAATTATACTAGTTATTCCAGAATTTATATGTTTAAGATTGATATCAGCATGATAGTTGTTCTTTAATGGTAATGAAGATTTATTTCGATGATCTGTTAGTTACACAACTTTCATTAATGGTAATTGTGGGTTTGCTAAATTTCATTTCAGATGGTTACAATGCCCCTAATTTTAGTTACCTTTTTTTTCATGTGAAAATTTTCATATTGTTATGTTTATGTTTATGTTTATACGTAATGAACTTCATCTTGTGGAGTATTTGTTTTGAATAAAGAAACTGCACCAAGCCCTCAAGGGCGGGGCCTCGTTGGCTAAGGCTTGCACTCTTTGAGGAACATCTACCCAAATGTGGCATGTTCAATTCTTCCAGTAAGCTTAATAAGGAAAACTCTTGATTTGTCCAAAGTTTAAAAGAGGGTGTGGACATTTTTTTTAGCATAATAAAACTGCTCTGATATATATATATTAAGCTTTTGATACGTGAGATCCCACATCGGTTGAGGAGAGGAATGAAGCATTCTTTATAAAGGTGTGGAAACCTCTCCCTAGTAGACGCGTTTTAAAACTGTTACGTAACGGGCCAAAGCGGATAACATTTGCGAGCAGTGGGCTCTGACCGTTACATAATATGGCATTTTGTACAACCTTTTTTGATGTACTATGTAAGAAATCAAATTAATGATGCCTTTTTAACTATGGTAACAATCTGTTAGTAACATCCTGTTTTGTCTCTTGCTATGAAGGATATAATCACTTAGTTAAGTGTCTCTATCTCACCATGTTCAATCCCTTGGGGAGAGTTCATGTTGTTGATGTTTGACTTTGATATGTTACTTTGCCATAGCTGTACCTACAGATATTAAACCTGATCAGTATATTGTGAATTGAATTGAAGAATTGTTCCTGGGACTAGATAAATATGAGTTTTGAATGAGGTCTGGCCATGGTCTTGTACTGTGATTAATGATTACAGTTTGACAAATTACCCATCTCACATAATGTTCGAGACCCGTTAAAAGGGCCTGAATGCCGATGATTGACATCAAGCTATCGACTTTAGAAAGTGGAAAAACTTTTAGCATGAATAGATGTTAAGAACAATCAAGCTGTGATATTGTCTTGAAACGTGATATCCCAAGCATGTTAAATTCAGATGGGAGTGATTTTGTGAGATCCATATCGGTTGGAGAGGAGAACAAAGCATTTCTTATAAGGGTATAGAAACTTCTCCCTAACAAACACTTTTTAGAACCTTGAGAGGAAGCCCAAAAAAGACGATGTCTATTAGCGGTAGGCTTGGGCTGTTACAGATTTATAATTTTGTCATAAAGTTATATCGGGACATATGGTAAAATTTTATTCTCTGGTTGCTCTGATTATGTAGAACAGCTCCTTAAAAAGCTATAGATTTTCTTTATTCTTCTCTTAACAGGGATGATTTTCAGGTATCGTGCAGTGACAAGTGCATATTACAGAGGTGCTGTGGGTGCAATGCTGGTCTACGACATGACAAAGCGTCAAACGTTTGATCATATAGCTAGGTGGTTGGAAGAATTGCGTGCCCATGCAGACAAGAATATCGTTATAATGCTTATAGGGAACAAGTCCGATCTAGGCTCTCTTCGCGTCGTGCCTACAGAAGATGCAAAAGAGTTTGCTCAAATGGAGAATCTGTTTTTCATGGAAACATCCGCGCTCGAGGCAACTAATGTAGAGGCAGCATTCAATACTATCCTAACAGAAATTTACCGAGTTATCAGCAGGAAGGCGCTGATCGCAAACGAGGAAACTGATTCGGGAGGAAACTCATCACTGCTCAAAGGAACAAAGATTGTTGTCCCTGGACAAGAGCCTCAGTCTGCAACTTCTGGCTGTTGCAGGAGTTAACAGAGTAGTATTCTTGTTTGACTTTACCATATTCTCACATGAATTGCTTCTTTTTACAGCCTACACAAACACAATACCGCTGGTCTCCAAAAGAGTACAAGACTATTGTATTTCATACTTTTGATGTTACAAGGTAAAATAGTACTGATGTTCTAAGCTTTTTGTTTAGAGGCTCTGTCAACAACATAATGTACATTTTAGTCGAGCAAAAGCTTAATGTTGTCGTTCTTGTATTCTGATTCTTGTTTCAGTCATTCACGTTTATTGTTTTCTAAAATTATAATGACCAAATTGTTGGAGGCACATAATAATGTGGTCATAGTTGTTGATCTAATGGATTGGTTGAATGAAAG

mRNA sequence

GTTGGTCCATGTCAACGTTGACCATTGGTAAGGGAACAACGGAAGGAAGAAGAAGAAAAATCGTGGCTGCTCCGTCTCTCTTCTTCCCTCTGCTTTCGTCCATGTCAAAAACATTTTCGCTTCTTCTTTTCAACTCTTCGCTAAACCCTATTTTCCCTTGATTTTCCTTCTCTCCAAACACAATCCTTCCTCCATTTCCCTTTGTGTTCTACTCAACTGCAAACTAGTAGCATCAAAATCCCCTCGCAATCGCATCAAGCGATCGTTTGGTGTTCGAGTTTAACCTCTTTTTACGTTTTTTGTTTTTGACGATTGGATTAGATTTTGATTCTTTCGTTTGAGATATGTCTAATTTGCAATCGAATTTCAATCAGAAGATTGATTATGTTTTCAAGGTCGTGTTGATCGGAGATTCTGCGGTGGGGAAATCGCAACTTCTCTCCCGTTTTACTAGGAATGAGTTTAGTTTGGATTCGAAGGCGACTATCGGGGTTGAGTTTCAGACGAAGACGCTTGTTATTGACCAGAAGGCTATCAAGGCGCAGATATGGGATACTGCTGGTCAGGAGAGGTATCGTGCAGTGACAAGTGCATATTACAGAGGTGCTGTGGGTGCAATGCTGGTCTACGACATGACAAAGCGTCAAACGTTTGATCATATAGCTAGGTGGTTGGAAGAATTGCGTGCCCATGCAGACAAGAATATCGTTATAATGCTTATAGGGAACAAGTCCGATCTAGGCTCTCTTCGCGTCGTGCCTACAGAAGATGCAAAAGAGTTTGCTCAAATGGAGAATCTGTTTTTCATGGAAACATCCGCGCTCGAGGCAACTAATGTAGAGGCAGCATTCAATACTATCCTAACAGAAATTTACCGAGTTATCAGCAGGAAGGCGCTGATCGCAAACGAGGAAACTGATTCGGGAGGAAACTCATCACTGCTCAAAGGAACAAAGATTGTTGTCCCTGGACAAGAGCCTCAGTCTGCAACTTCTGGCTGTTGCAGGAGTTAACAGAGTAGTATTCTTGTTTGACTTTACCATATTCTCACATGAATTGCTTCTTTTTACAGCCTACACAAACACAATACCGCTGGTCTCCAAAAGAGTACAAGACTATTGTATTTCATACTTTTGATGTTACAAGGTAAAATAGTACTGATGTTCTAAGCTTTTTGTTTAGAGGCTCTGTCAACAACATAATGTACATTTTAGTCGAGCAAAAGCTTAATGTTGTCGTTCTTGTATTCTGATTCTTGTTTCAGTCATTCACGTTTATTGTTTTCTAAAATTATAATGACCAAATTGTTGGAGGCACATAATAATGTGGTCATAGTTGTTGATCTAATGGATTGGTTGAATGAAAG

Coding sequence (CDS)

ATGTCTAATTTGCAATCGAATTTCAATCAGAAGATTGATTATGTTTTCAAGGTCGTGTTGATCGGAGATTCTGCGGTGGGGAAATCGCAACTTCTCTCCCGTTTTACTAGGAATGAGTTTAGTTTGGATTCGAAGGCGACTATCGGGGTTGAGTTTCAGACGAAGACGCTTGTTATTGACCAGAAGGCTATCAAGGCGCAGATATGGGATACTGCTGGTCAGGAGAGGTATCGTGCAGTGACAAGTGCATATTACAGAGGTGCTGTGGGTGCAATGCTGGTCTACGACATGACAAAGCGTCAAACGTTTGATCATATAGCTAGGTGGTTGGAAGAATTGCGTGCCCATGCAGACAAGAATATCGTTATAATGCTTATAGGGAACAAGTCCGATCTAGGCTCTCTTCGCGTCGTGCCTACAGAAGATGCAAAAGAGTTTGCTCAAATGGAGAATCTGTTTTTCATGGAAACATCCGCGCTCGAGGCAACTAATGTAGAGGCAGCATTCAATACTATCCTAACAGAAATTTACCGAGTTATCAGCAGGAAGGCGCTGATCGCAAACGAGGAAACTGATTCGGGAGGAAACTCATCACTGCTCAAAGGAACAAAGATTGTTGTCCCTGGACAAGAGCCTCAGTCTGCAACTTCTGGCTGTTGCAGGAGTTAA

Protein sequence

MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFTRNEFSLDSKATIGVEFQTKTLVIDQKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQTFDHIARWLEELRAHADKNIVIMLIGNKSDLGSLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVISRKALIANEETDSGGNSSLLKGTKIVVPGQEPQSATSGCCRS

Homology

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BLAST of CmoCh01G002280 vs. ExPASy Swiss-Prot
Match: Q9FE79 (Ras-related protein RABA4c OS=Arabidopsis thaliana OX=3702 GN=RABA4C PE=2 SV=1)

HSP 1 Score: 363.2 bits (931), Expect = 2.1e-99
Identity = 179/220 (81.36%), Postives = 203/220 (92.27%), Query Frame = 0


Query: 1   MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFTRNEFSLDSKATIGVEFQTKTLVID 60
           MS  QSNFNQKIDYVFKVVLIGDSAVGKSQLL+RF+RNEFS++SKATIGVEFQT+TL ID
Sbjct: 1   MSKFQSNFNQKIDYVFKVVLIGDSAVGKSQLLARFSRNEFSIESKATIGVEFQTRTLEID 60

Query: 61  QKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQTFDHIARWLEELRAHADKN 120
           +K IKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYD+TKRQ+FDH+ARWLEELR HADKN
Sbjct: 61  RKTIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKN 120

Query: 121 IVIMLIGNKSDLGSLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVI 180
           IVIMLIGNK+DLG+LR VPTEDAKEFAQ ENLFFMETSAL++ NVE +F T+LTEIYR++
Sbjct: 121 IVIMLIGNKTDLGTLRAVPTEDAKEFAQRENLFFMETSALDSNNVEPSFLTVLTEIYRIV 180

Query: 181 SRKALIANEETDSGGNSSLLKGTKIVVPGQEPQSATSGCC 221
           S+K L+ANEE +SGG+SSLL+GTKIVV G+E +S   GCC
Sbjct: 181 SKKNLVANEEGESGGDSSLLQGTKIVVAGEETESKGKGCC 220

[Close]

BLAST of CmoCh01G002280 vs. ExPASy Swiss-Prot
Match: P25766 (Ras-related protein RGP1 OS=Oryza sativa subsp. japonica OX=39947 GN=RGP1 PE=2 SV=2)

HSP 1 Score: 358.2 bits (918), Expect = 6.6e-98
Identity = 180/214 (84.11%), Postives = 197/214 (92.06%), Query Frame = 0


Query: 10  QKIDYVFKVVLIGDSAVGKSQLLSRFTRNEFSLDSKATIGVEFQTKTLVIDQKAIKAQIW 69
           QKIDYVFKVVLIGDSAVGKSQLL+RF RNEF+LDSKATIGVEFQT+TL ID + +KAQIW
Sbjct: 13  QKIDYVFKVVLIGDSAVGKSQLLARFARNEFNLDSKATIGVEFQTRTLHIDARTVKAQIW 72

Query: 70  DTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQTFDHIARWLEELRAHADKNIVIMLIGNK 129
           DTAGQERYRAVTSAYYRGAVGAMLVYD+TKRQ+FDH+ARWLEELR HADKNIVIMLIGNK
Sbjct: 73  DTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKNIVIMLIGNK 132

Query: 130 SDLGSLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVISRKALIANE 189
           SDLG+LRVVPTEDAKEFA+ ENLFFMETSALE+TNVE AF T+LTEIYR++S+K L+ANE
Sbjct: 133 SDLGTLRVVPTEDAKEFAERENLFFMETSALESTNVENAFMTVLTEIYRIVSKKNLVANE 192

Query: 190 ETDSGGNSSLLKGTKIVVPGQEPQSAT-SGCCRS 223
           E DS GNSSLLKGTKIVVPGQEP   T + CC S
Sbjct: 193 EVDSSGNSSLLKGTKIVVPGQEPAPPTKASCCMS 226

[Close]

BLAST of CmoCh01G002280 vs. ExPASy Swiss-Prot
Match: Q9LH50 (Ras-related protein RABA4d OS=Arabidopsis thaliana OX=3702 GN=RABA4D PE=1 SV=1)

HSP 1 Score: 355.9 bits (912), Expect = 3.3e-97
Identity = 177/220 (80.45%), Postives = 199/220 (90.45%), Query Frame = 0


Query: 1   MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFTRNEFSLDSKATIGVEFQTKTLVID 60
           MSNL  ++NQKIDYVFKVVLIGDSAVGK+QLL+RF RNEFS+DSKATIGVEFQTKTLVID
Sbjct: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFARNEFSVDSKATIGVEFQTKTLVID 60

Query: 61  QKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQTFDHIARWLEELRAHADKN 120
            K +KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQ+FDH+A+WLEELR HADKN
Sbjct: 61  NKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMAKWLEELRGHADKN 120

Query: 121 IVIMLIGNKSDLGSLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVI 180
           IVIMLIGNK DLGSLR VPTEDA+EFAQ ENLFFMETSALEATNVE AF TILTEIYR+I
Sbjct: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTILTEIYRII 180

Query: 181 SRKALIANEETDSGGNSSLLKGTKIVVPGQEPQSATSGCC 221
           S+K+L A+++ D+ GNSSLLKGT+I++P ++      GCC
Sbjct: 181 SKKSLTADDD-DADGNSSLLKGTRIIIPSEQESGKRGGCC 219

[Close]

BLAST of CmoCh01G002280 vs. ExPASy Swiss-Prot
Match: Q40191 (Ras-related protein Rab11A OS=Lotus japonicus OX=34305 GN=RAB11A PE=2 SV=1)

HSP 1 Score: 317.8 bits (813), Expect = 9.9e-86
Identity = 161/216 (74.54%), Postives = 187/216 (86.57%), Query Frame = 0


Query: 9   NQKIDYVFKVVLIGDSAVGKSQLLSRFTRNEFSLDSKATIGVEFQTKTLVIDQKAIKAQI 68
           N KIDYVFKVVLIGDSAVGKSQ+L+RF RNEFSLDSK+TIGVEFQT+TLVID K +KAQI
Sbjct: 11  NAKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKSTIGVEFQTRTLVIDHKTVKAQI 70

Query: 69  WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQTFDHIARWLEELRAHADKNIVIMLIGN 128
           WDTAGQERYRAVTSAYYRGAVGAMLVYD+TKRQTFDHI RWLEELR HADKNIVI+LIGN
Sbjct: 71  WDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRNHADKNIVIILIGN 130

Query: 129 KSDLGSLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVISRKALIAN 188
           K DL + R VPTEDAKEFA+ E LFF+ETSALEATNVE+AF T+LTEIY ++++K+L A 
Sbjct: 131 KCDLVNQRDVPTEDAKEFAEKEGLFFLETSALEATNVESAFTTVLTEIYNIVNKKSLAA- 190

Query: 189 EETDSGGNSSLLKGTKIVVPG--QEPQSATSGCCRS 223
           +E+   GNS+ L G KI++PG  QE  +  + CC++
Sbjct: 191 DESQGNGNSASLSGQKIIIPGPAQEIPAKRNMCCQA 225

[Close]

BLAST of CmoCh01G002280 vs. ExPASy Swiss-Prot
Match: Q9FJN8 (Ras-related protein RABA4a OS=Arabidopsis thaliana OX=3702 GN=RABA4A PE=1 SV=1)

HSP 1 Score: 309.7 bits (792), Expect = 2.7e-83
Identity = 156/217 (71.89%), Postives = 187/217 (86.18%), Query Frame = 0


Query: 9   NQKIDYVFKVVLIGDSAVGKSQLLSRFTRNEFSLDSKATIGVEFQTKTLVIDQKAIKAQI 68
           +QKIDYVFKVVLIGDSAVGKSQ+L+R+ R+EFSLDSKATIGVEFQT+TLVID K++KAQI
Sbjct: 11  SQKIDYVFKVVLIGDSAVGKSQILARYARDEFSLDSKATIGVEFQTRTLVIDHKSVKAQI 70

Query: 69  WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQTFDHIARWLEELRAHADKNIVIMLIGN 128
           WDTAGQERYRAVTSAYYRGAVGAMLVYD+T+RQTFDHI RWLEELRAHADKNIVI+LIGN
Sbjct: 71  WDTAGQERYRAVTSAYYRGAVGAMLVYDITRRQTFDHIPRWLEELRAHADKNIVIILIGN 130

Query: 129 KSDLGSLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVISRKALIAN 188
           KSDL   R +PTEDAKEFA+ E LFF+ETSA  ATNVE+AF+T+LTEI+ ++++K+L A+
Sbjct: 131 KSDLVDQRAIPTEDAKEFAEKEGLFFLETSAFNATNVESAFSTVLTEIFNIVNKKSLAAS 190

Query: 189 EETDSGGNSSLLKGTKIVV---PGQEPQSATSGCCRS 223
           E+ ++ GN   L G KI +   PGQ   + ++ CC S
Sbjct: 191 EDQEN-GNPGSLAGKKIDIVPGPGQVIPNKSNMCCNS 226

[Close]

BLAST of CmoCh01G002280 vs. ExPASy TrEMBL
Match: A0A6J1GBR1 (ras-related protein RABA4c-like OS=Cucurbita moschata OX=3662 GN=LOC111452722 PE=4 SV=1)

HSP 1 Score: 431.0 bits (1107), Expect = 3.0e-117
Identity = 222/222 (100.00%), Postives = 222/222 (100.00%), Query Frame = 0


Query: 1   MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFTRNEFSLDSKATIGVEFQTKTLVID 60
           MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFTRNEFSLDSKATIGVEFQTKTLVID
Sbjct: 1   MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFTRNEFSLDSKATIGVEFQTKTLVID 60

Query: 61  QKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQTFDHIARWLEELRAHADKN 120
           QKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQTFDHIARWLEELRAHADKN
Sbjct: 61  QKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQTFDHIARWLEELRAHADKN 120

Query: 121 IVIMLIGNKSDLGSLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVI 180
           IVIMLIGNKSDLGSLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVI
Sbjct: 121 IVIMLIGNKSDLGSLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVI 180

Query: 181 SRKALIANEETDSGGNSSLLKGTKIVVPGQEPQSATSGCCRS 223
           SRKALIANEETDSGGNSSLLKGTKIVVPGQEPQSATSGCCRS
Sbjct: 181 SRKALIANEETDSGGNSSLLKGTKIVVPGQEPQSATSGCCRS 222

[Close]

BLAST of CmoCh01G002280 vs. ExPASy TrEMBL
Match: A0A6J1KGX4 (ras-related protein RABA4c-like OS=Cucurbita maxima OX=3661 GN=LOC111493112 PE=4 SV=1)

HSP 1 Score: 425.6 bits (1093), Expect = 1.2e-115
Identity = 219/222 (98.65%), Postives = 220/222 (99.10%), Query Frame = 0


Query: 1   MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFTRNEFSLDSKATIGVEFQTKTLVID 60
           MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFTRNEFSLDSKATIGVEFQTKTLVID
Sbjct: 1   MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFTRNEFSLDSKATIGVEFQTKTLVID 60

Query: 61  QKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQTFDHIARWLEELRAHADKN 120
           QKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQTFDHI RWLEELRAHADKN
Sbjct: 61  QKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQTFDHITRWLEELRAHADKN 120

Query: 121 IVIMLIGNKSDLGSLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVI 180
           IVIMLIGNKSDLGSLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVI
Sbjct: 121 IVIMLIGNKSDLGSLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVI 180

Query: 181 SRKALIANEETDSGGNSSLLKGTKIVVPGQEPQSATSGCCRS 223
           SRKALIANEETDSGG+SSLLKGTKIVVPGQEPQ ATSGCCRS
Sbjct: 181 SRKALIANEETDSGGSSSLLKGTKIVVPGQEPQPATSGCCRS 222

[Close]

BLAST of CmoCh01G002280 vs. ExPASy TrEMBL
Match: A0A1S3CFD0 (ras-related protein RABA4c isoform X1 OS=Cucumis melo OX=3656 GN=LOC103500306 PE=4 SV=1)

HSP 1 Score: 416.0 bits (1068), Expect = 9.9e-113
Identity = 212/222 (95.50%), Postives = 219/222 (98.65%), Query Frame = 0


Query: 1   MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFTRNEFSLDSKATIGVEFQTKTLVID 60
           MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRF RNEFSLDSKATIGVEFQTKTL ID
Sbjct: 1   MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLNID 60

Query: 61  QKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQTFDHIARWLEELRAHADKN 120
           QKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQ+FDHIARWLEELR HADKN
Sbjct: 61  QKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHIARWLEELRGHADKN 120

Query: 121 IVIMLIGNKSDLGSLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVI 180
           IVIMLIGNKSDLGSLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVI
Sbjct: 121 IVIMLIGNKSDLGSLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVI 180

Query: 181 SRKALIANEETDSGGNSSLLKGTKIVVPGQEPQSATSGCCRS 223
           S+KAL+AN+ETDSGG+SSLLKGTKIVVPGQEPQ+A+SGCCRS
Sbjct: 181 SKKALVANDETDSGGSSSLLKGTKIVVPGQEPQAASSGCCRS 222

[Close]

BLAST of CmoCh01G002280 vs. ExPASy TrEMBL
Match: A0A0A0LEW7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G698470 PE=4 SV=1)

HSP 1 Score: 414.8 bits (1065), Expect = 2.2e-112
Identity = 213/222 (95.95%), Postives = 218/222 (98.20%), Query Frame = 0


Query: 1   MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFTRNEFSLDSKATIGVEFQTKTLVID 60
           MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRF RNEFSLDSKATIGVEFQTKTL ID
Sbjct: 1   MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLNID 60

Query: 61  QKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQTFDHIARWLEELRAHADKN 120
           QKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQTFDHIARWLEELR HADKN
Sbjct: 61  QKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQTFDHIARWLEELRGHADKN 120

Query: 121 IVIMLIGNKSDLGSLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVI 180
           IVIMLIGNKSDLGSLRVVPTEDAKEFAQMENL FMETSALEATNVEAAFNTILTEIYRVI
Sbjct: 121 IVIMLIGNKSDLGSLRVVPTEDAKEFAQMENLSFMETSALEATNVEAAFNTILTEIYRVI 180

Query: 181 SRKALIANEETDSGGNSSLLKGTKIVVPGQEPQSATSGCCRS 223
           S+KALIAN+ETDSGG+SSLLKGTKIVVPGQEPQ+A+SGCCRS
Sbjct: 181 SKKALIANDETDSGGSSSLLKGTKIVVPGQEPQAASSGCCRS 222

[Close]

BLAST of CmoCh01G002280 vs. ExPASy TrEMBL
Match: A0A6J1DGV8 (ras-related protein RABA4d-like OS=Momordica charantia OX=3673 GN=LOC111020375 PE=4 SV=1)

HSP 1 Score: 404.4 bits (1038), Expect = 3.0e-109
Identity = 204/222 (91.89%), Postives = 215/222 (96.85%), Query Frame = 0


Query: 1   MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFTRNEFSLDSKATIGVEFQTKTLVID 60
           MSNL SNFNQKIDYVFKVVLIGDSAVGKSQLL+RF+RNEFSLDSKATIGVEFQTKTLVID
Sbjct: 1   MSNLNSNFNQKIDYVFKVVLIGDSAVGKSQLLARFSRNEFSLDSKATIGVEFQTKTLVID 60

Query: 61  QKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQTFDHIARWLEELRAHADKN 120
           QK IKAQIWDTAGQERYRAVTSAYYRGAVGAML+YDMTKRQ+FDHIARWLEELR HADKN
Sbjct: 61  QKTIKAQIWDTAGQERYRAVTSAYYRGAVGAMLIYDMTKRQSFDHIARWLEELRGHADKN 120

Query: 121 IVIMLIGNKSDLGSLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVI 180
           IVIMLIGNKSDLGSLRVVPT+DA+EFAQMENLFFMETSALEATNVE AFNTILTEIY+VI
Sbjct: 121 IVIMLIGNKSDLGSLRVVPTDDAREFAQMENLFFMETSALEATNVETAFNTILTEIYQVI 180

Query: 181 SRKALIANEETDSGGNSSLLKGTKIVVPGQEPQSATSGCCRS 223
           SRKAL+ANE+ DSGGNSSLLKGTKIVVPGQE  +A+SGCCRS
Sbjct: 181 SRKALVANEDADSGGNSSLLKGTKIVVPGQERSAASSGCCRS 222

[Close]

BLAST of CmoCh01G002280 vs. NCBI nr
Match: XP_022949337.1 (ras-related protein RABA4c-like [Cucurbita moschata] >KAG6606869.1 Ras-related protein RABA4c, partial [Cucurbita argyrosperma subsp. sororia] >KAG7036575.1 Ras-related protein RABA4c [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 431.0 bits (1107), Expect = 6.1e-117
Identity = 222/222 (100.00%), Postives = 222/222 (100.00%), Query Frame = 0


Query: 1   MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFTRNEFSLDSKATIGVEFQTKTLVID 60
           MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFTRNEFSLDSKATIGVEFQTKTLVID
Sbjct: 1   MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFTRNEFSLDSKATIGVEFQTKTLVID 60

Query: 61  QKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQTFDHIARWLEELRAHADKN 120
           QKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQTFDHIARWLEELRAHADKN
Sbjct: 61  QKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQTFDHIARWLEELRAHADKN 120

Query: 121 IVIMLIGNKSDLGSLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVI 180
           IVIMLIGNKSDLGSLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVI
Sbjct: 121 IVIMLIGNKSDLGSLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVI 180

Query: 181 SRKALIANEETDSGGNSSLLKGTKIVVPGQEPQSATSGCCRS 223
           SRKALIANEETDSGGNSSLLKGTKIVVPGQEPQSATSGCCRS
Sbjct: 181 SRKALIANEETDSGGNSSLLKGTKIVVPGQEPQSATSGCCRS 222

[Close]

BLAST of CmoCh01G002280 vs. NCBI nr
Match: XP_023525670.1 (ras-related protein RABA4c-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 427.9 bits (1099), Expect = 5.2e-116
Identity = 220/222 (99.10%), Postives = 222/222 (100.00%), Query Frame = 0


Query: 1   MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFTRNEFSLDSKATIGVEFQTKTLVID 60
           MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFTRNEFSLDSKATIGVEFQTKTLVID
Sbjct: 1   MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFTRNEFSLDSKATIGVEFQTKTLVID 60

Query: 61  QKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQTFDHIARWLEELRAHADKN 120
           QKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQTFDHIARWLEELRAHADKN
Sbjct: 61  QKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQTFDHIARWLEELRAHADKN 120

Query: 121 IVIMLIGNKSDLGSLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVI 180
           IVIMLIGNKSDLGSLRVVPTEDAKEF+QMENLFFMETSALEATNVEAAFNTILTEIYRVI
Sbjct: 121 IVIMLIGNKSDLGSLRVVPTEDAKEFSQMENLFFMETSALEATNVEAAFNTILTEIYRVI 180

Query: 181 SRKALIANEETDSGGNSSLLKGTKIVVPGQEPQSATSGCCRS 223
           SRKALIANEETDSGG+SSLLKGTKIVVPGQEPQSATSGCCRS
Sbjct: 181 SRKALIANEETDSGGSSSLLKGTKIVVPGQEPQSATSGCCRS 222

[Close]

BLAST of CmoCh01G002280 vs. NCBI nr
Match: XP_022998498.1 (ras-related protein RABA4c-like [Cucurbita maxima])

HSP 1 Score: 425.6 bits (1093), Expect = 2.6e-115
Identity = 219/222 (98.65%), Postives = 220/222 (99.10%), Query Frame = 0


Query: 1   MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFTRNEFSLDSKATIGVEFQTKTLVID 60
           MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFTRNEFSLDSKATIGVEFQTKTLVID
Sbjct: 1   MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFTRNEFSLDSKATIGVEFQTKTLVID 60

Query: 61  QKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQTFDHIARWLEELRAHADKN 120
           QKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQTFDHI RWLEELRAHADKN
Sbjct: 61  QKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQTFDHITRWLEELRAHADKN 120

Query: 121 IVIMLIGNKSDLGSLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVI 180
           IVIMLIGNKSDLGSLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVI
Sbjct: 121 IVIMLIGNKSDLGSLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVI 180

Query: 181 SRKALIANEETDSGGNSSLLKGTKIVVPGQEPQSATSGCCRS 223
           SRKALIANEETDSGG+SSLLKGTKIVVPGQEPQ ATSGCCRS
Sbjct: 181 SRKALIANEETDSGGSSSLLKGTKIVVPGQEPQPATSGCCRS 222

[Close]

BLAST of CmoCh01G002280 vs. NCBI nr
Match: XP_008461787.1 (PREDICTED: ras-related protein RABA4c isoform X1 [Cucumis melo])

HSP 1 Score: 416.0 bits (1068), Expect = 2.0e-112
Identity = 212/222 (95.50%), Postives = 219/222 (98.65%), Query Frame = 0


Query: 1   MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFTRNEFSLDSKATIGVEFQTKTLVID 60
           MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRF RNEFSLDSKATIGVEFQTKTL ID
Sbjct: 1   MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLNID 60

Query: 61  QKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQTFDHIARWLEELRAHADKN 120
           QKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQ+FDHIARWLEELR HADKN
Sbjct: 61  QKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHIARWLEELRGHADKN 120

Query: 121 IVIMLIGNKSDLGSLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVI 180
           IVIMLIGNKSDLGSLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVI
Sbjct: 121 IVIMLIGNKSDLGSLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVI 180

Query: 181 SRKALIANEETDSGGNSSLLKGTKIVVPGQEPQSATSGCCRS 223
           S+KAL+AN+ETDSGG+SSLLKGTKIVVPGQEPQ+A+SGCCRS
Sbjct: 181 SKKALVANDETDSGGSSSLLKGTKIVVPGQEPQAASSGCCRS 222

[Close]

BLAST of CmoCh01G002280 vs. NCBI nr
Match: XP_004149604.1 (ras-related protein RABA4c isoform X1 [Cucumis sativus] >KGN58606.1 hypothetical protein Csa_002054 [Cucumis sativus])

HSP 1 Score: 414.8 bits (1065), Expect = 4.5e-112
Identity = 213/222 (95.95%), Postives = 218/222 (98.20%), Query Frame = 0


Query: 1   MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFTRNEFSLDSKATIGVEFQTKTLVID 60
           MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRF RNEFSLDSKATIGVEFQTKTL ID
Sbjct: 1   MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLNID 60

Query: 61  QKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQTFDHIARWLEELRAHADKN 120
           QKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQTFDHIARWLEELR HADKN
Sbjct: 61  QKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQTFDHIARWLEELRGHADKN 120

Query: 121 IVIMLIGNKSDLGSLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVI 180
           IVIMLIGNKSDLGSLRVVPTEDAKEFAQMENL FMETSALEATNVEAAFNTILTEIYRVI
Sbjct: 121 IVIMLIGNKSDLGSLRVVPTEDAKEFAQMENLSFMETSALEATNVEAAFNTILTEIYRVI 180

Query: 181 SRKALIANEETDSGGNSSLLKGTKIVVPGQEPQSATSGCCRS 223
           S+KALIAN+ETDSGG+SSLLKGTKIVVPGQEPQ+A+SGCCRS
Sbjct: 181 SKKALIANDETDSGGSSSLLKGTKIVVPGQEPQAASSGCCRS 222

[Close]

BLAST of CmoCh01G002280 vs. TAIR 10
Match: AT5G47960.1 (RAB GTPase homolog A4C )

HSP 1 Score: 363.2 bits (931), Expect = 1.5e-100
Identity = 179/220 (81.36%), Postives = 203/220 (92.27%), Query Frame = 0


Query: 1   MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFTRNEFSLDSKATIGVEFQTKTLVID 60
           MS  QSNFNQKIDYVFKVVLIGDSAVGKSQLL+RF+RNEFS++SKATIGVEFQT+TL ID
Sbjct: 1   MSKFQSNFNQKIDYVFKVVLIGDSAVGKSQLLARFSRNEFSIESKATIGVEFQTRTLEID 60

Query: 61  QKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQTFDHIARWLEELRAHADKN 120
           +K IKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYD+TKRQ+FDH+ARWLEELR HADKN
Sbjct: 61  RKTIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKN 120

Query: 121 IVIMLIGNKSDLGSLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVI 180
           IVIMLIGNK+DLG+LR VPTEDAKEFAQ ENLFFMETSAL++ NVE +F T+LTEIYR++
Sbjct: 121 IVIMLIGNKTDLGTLRAVPTEDAKEFAQRENLFFMETSALDSNNVEPSFLTVLTEIYRIV 180

Query: 181 SRKALIANEETDSGGNSSLLKGTKIVVPGQEPQSATSGCC 221
           S+K L+ANEE +SGG+SSLL+GTKIVV G+E +S   GCC
Sbjct: 181 SKKNLVANEEGESGGDSSLLQGTKIVVAGEETESKGKGCC 220

[Close]

BLAST of CmoCh01G002280 vs. TAIR 10
Match: AT3G12160.1 (RAB GTPase homolog A4D )

HSP 1 Score: 355.9 bits (912), Expect = 2.3e-98
Identity = 177/220 (80.45%), Postives = 199/220 (90.45%), Query Frame = 0


Query: 1   MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFTRNEFSLDSKATIGVEFQTKTLVID 60
           MSNL  ++NQKIDYVFKVVLIGDSAVGK+QLL+RF RNEFS+DSKATIGVEFQTKTLVID
Sbjct: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFARNEFSVDSKATIGVEFQTKTLVID 60

Query: 61  QKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQTFDHIARWLEELRAHADKN 120
            K +KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQ+FDH+A+WLEELR HADKN
Sbjct: 61  NKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMAKWLEELRGHADKN 120

Query: 121 IVIMLIGNKSDLGSLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVI 180
           IVIMLIGNK DLGSLR VPTEDA+EFAQ ENLFFMETSALEATNVE AF TILTEIYR+I
Sbjct: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTILTEIYRII 180

Query: 181 SRKALIANEETDSGGNSSLLKGTKIVVPGQEPQSATSGCC 221
           S+K+L A+++ D+ GNSSLLKGT+I++P ++      GCC
Sbjct: 181 SKKSLTADDD-DADGNSSLLKGTRIIIPSEQESGKRGGCC 219

[Close]

BLAST of CmoCh01G002280 vs. TAIR 10
Match: AT5G65270.1 (RAB GTPase homolog A4A )

HSP 1 Score: 309.7 bits (792), Expect = 1.9e-84
Identity = 156/217 (71.89%), Postives = 187/217 (86.18%), Query Frame = 0


Query: 9   NQKIDYVFKVVLIGDSAVGKSQLLSRFTRNEFSLDSKATIGVEFQTKTLVIDQKAIKAQI 68
           +QKIDYVFKVVLIGDSAVGKSQ+L+R+ R+EFSLDSKATIGVEFQT+TLVID K++KAQI
Sbjct: 11  SQKIDYVFKVVLIGDSAVGKSQILARYARDEFSLDSKATIGVEFQTRTLVIDHKSVKAQI 70

Query: 69  WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQTFDHIARWLEELRAHADKNIVIMLIGN 128
           WDTAGQERYRAVTSAYYRGAVGAMLVYD+T+RQTFDHI RWLEELRAHADKNIVI+LIGN
Sbjct: 71  WDTAGQERYRAVTSAYYRGAVGAMLVYDITRRQTFDHIPRWLEELRAHADKNIVIILIGN 130

Query: 129 KSDLGSLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVISRKALIAN 188
           KSDL   R +PTEDAKEFA+ E LFF+ETSA  ATNVE+AF+T+LTEI+ ++++K+L A+
Sbjct: 131 KSDLVDQRAIPTEDAKEFAEKEGLFFLETSAFNATNVESAFSTVLTEIFNIVNKKSLAAS 190

Query: 189 EETDSGGNSSLLKGTKIVV---PGQEPQSATSGCCRS 223
           E+ ++ GN   L G KI +   PGQ   + ++ CC S
Sbjct: 191 EDQEN-GNPGSLAGKKIDIVPGPGQVIPNKSNMCCNS 226

[Close]

BLAST of CmoCh01G002280 vs. TAIR 10
Match: AT4G39990.1 (RAB GTPase homolog A4B )

HSP 1 Score: 306.6 bits (784), Expect = 1.6e-83
Identity = 156/214 (72.90%), Postives = 184/214 (85.98%), Query Frame = 0


Query: 11  KIDYVFKVVLIGDSAVGKSQLLSRFTRNEFSLDSKATIGVEFQTKTLVIDQKAIKAQIWD 70
           K+DYVFKVVLIGDSAVGKSQLL+RF R+EFS+DSKATIGVEFQT+TL I+QK+IKAQIWD
Sbjct: 13  KVDYVFKVVLIGDSAVGKSQLLARFARDEFSMDSKATIGVEFQTRTLSIEQKSIKAQIWD 72

Query: 71  TAGQERYRAVTSAYYRGAVGAMLVYDMTKRQTFDHIARWLEELRAHADKNIVIMLIGNKS 130
           TAGQERYRAVTSAYYRGAVGAMLVYDMTKR+TF+HI RWLEELRAHADKNIVI+LIGNKS
Sbjct: 73  TAGQERYRAVTSAYYRGAVGAMLVYDMTKRETFEHIPRWLEELRAHADKNIVIILIGNKS 132

Query: 131 DLGSLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVISRKALIANEE 190
           DL   R VPTEDAKEFA+ E LFF+ETSAL ATNVE +FNT++T+IY  +++K L +  +
Sbjct: 133 DLEDQRAVPTEDAKEFAEKEGLFFLETSALNATNVENSFNTLMTQIYNTVNKKNLASEGD 192

Query: 191 TDSGGNSSLLKGTKIVVP--GQEPQSATSGCCRS 223
           +++ G+   L G KI++P  GQE  + TS CC S
Sbjct: 193 SNNPGS---LAGKKILIPGSGQEIPAKTSTCCTS 223

[Close]

BLAST of CmoCh01G002280 vs. TAIR 10
Match: AT1G16920.1 (RAB GTPase homolog A1B )

HSP 1 Score: 269.6 bits (688), Expect = 2.2e-72
Identity = 135/208 (64.90%), Postives = 165/208 (79.33%), Query Frame = 0


Query: 13  DYVFKVVLIGDSAVGKSQLLSRFTRNEFSLDSKATIGVEFQTKTLVIDQKAIKAQIWDTA 72
           DY+FKVVLIGDS VGKS LLSRFT+NEF+L+SK+TIGVEF T+TL +D K +KAQIWDTA
Sbjct: 11  DYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLKVDGKVVKAQIWDTA 70

Query: 73  GQERYRAVTSAYYRGAVGAMLVYDMTKRQTFDHIARWLEELRAHADKNIVIMLIGNKSDL 132
           GQERYRA+TSAYYRGAVGA+LVYD+T+R TF+++ RWL+EL+ H D NIV+ML+GNKSDL
Sbjct: 71  GQERYRAITSAYYRGAVGALLVYDVTRRATFENVDRWLKELKNHTDPNIVVMLVGNKSDL 130

Query: 133 GSLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVISRKALIANEETD 192
             L  VPTED K +A+ E+L FMETSALEATNVE AF  +LT+IYR+ S+K + A E+  
Sbjct: 131 RHLLAVPTEDGKSYAEQESLCFMETSALEATNVEDAFAEVLTQIYRITSKKQVEAGED-- 190

Query: 193 SGGNSSLLKGTKIVVPGQEPQSATSGCC 221
             GN+S+ KG KI V          GCC
Sbjct: 191 --GNASVPKGEKIEVKNDVSALKKLGCC 214

The following BLAST results are available for this feature:

BLAST of CmoCh01G002280 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FE79	2.1e-99	81.36	Ras-related protein RABA4c OS=Arabidopsis thaliana OX=3702 GN=RABA4C PE=2 SV=1	[more]
P25766	6.6e-98	84.11	Ras-related protein RGP1 OS=Oryza sativa subsp. japonica OX=39947 GN=RGP1 PE=2 S...	[more]
Q9LH50	3.3e-97	80.45	Ras-related protein RABA4d OS=Arabidopsis thaliana OX=3702 GN=RABA4D PE=1 SV=1	[more]
Q40191	9.9e-86	74.54	Ras-related protein Rab11A OS=Lotus japonicus OX=34305 GN=RAB11A PE=2 SV=1	[more]
Q9FJN8	2.7e-83	71.89	Ras-related protein RABA4a OS=Arabidopsis thaliana OX=3702 GN=RABA4A PE=1 SV=1	[more]

BLAST of CmoCh01G002280 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GBR1	3.0e-117	100.00	ras-related protein RABA4c-like OS=Cucurbita moschata OX=3662 GN=LOC111452722 PE...	[more]
A0A6J1KGX4	1.2e-115	98.65	ras-related protein RABA4c-like OS=Cucurbita maxima OX=3661 GN=LOC111493112 PE=4...	[more]
A0A1S3CFD0	9.9e-113	95.50	ras-related protein RABA4c isoform X1 OS=Cucumis melo OX=3656 GN=LOC103500306 PE...	[more]
A0A0A0LEW7	2.2e-112	95.95	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G698470 PE=4 SV=1	[more]
A0A6J1DGV8	3.0e-109	91.89	ras-related protein RABA4d-like OS=Momordica charantia OX=3673 GN=LOC111020375 P...	[more]

BLAST of CmoCh01G002280 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022949337.1	6.1e-117	100.00	ras-related protein RABA4c-like [Cucurbita moschata] >KAG6606869.1 Ras-related p...	[more]
XP_023525670.1	5.2e-116	99.10	ras-related protein RABA4c-like [Cucurbita pepo subsp. pepo]	[more]
XP_022998498.1	2.6e-115	98.65	ras-related protein RABA4c-like [Cucurbita maxima]	[more]
XP_008461787.1	2.0e-112	95.50	PREDICTED: ras-related protein RABA4c isoform X1 [Cucumis melo]	[more]
XP_004149604.1	4.5e-112	95.95	ras-related protein RABA4c isoform X1 [Cucumis sativus] >KGN58606.1 hypothetical...	[more]

BLAST of CmoCh01G002280 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G47960.1	1.5e-100	81.36	RAB GTPase homolog A4C	[more]
AT3G12160.1	2.3e-98	80.45	RAB GTPase homolog A4D	[more]
AT5G65270.1	1.9e-84	71.89	RAB GTPase homolog A4A	[more]
AT4G39990.1	1.6e-83	72.90	RAB GTPase homolog A4B	[more]
AT1G16920.1	2.2e-72	64.90	RAB GTPase homolog A1B	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 39..55 score: 34.83 coord: 119..132 score: 51.17 coord: 16..37 score: 52.86 coord: 57..79 score: 52.46 coord: 154..176 score: 43.38
None	No IPR available	SMART	SM00177	arf_sub_2	coord: 1..181 e-value: 0.006 score: -1.6
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 21..215 e-value: 1.5E-5 score: 29.4
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 13..179 e-value: 9.2E-27 score: 104.9
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 16..179 e-value: 1.7E-104 score: 363.1
None	No IPR available	PANTHER	PTHR47978:SF13	RAS-RELATED PROTEIN RABA4C	coord: 1..221
None	No IPR available	PANTHER	PTHR47978	FAMILY NOT NAMED	coord: 1..221
None	No IPR available	PROSITE	PS51420	RHO	coord: 9..184 score: 9.079401
None	No IPR available	PROSITE	PS51419	RAB	coord: 11..220 score: 35.274509
None	No IPR available	CDD	cd01868	Rab11_like	coord: 13..177 e-value: 9.98753E-126 score: 350.322
IPR001806	Small GTPase	SMART	SM00174	rho_sub_3	coord: 18..175 e-value: 2.0E-10 score: 14.3
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 17..177 e-value: 1.6E-60 score: 203.4
IPR001806	Small GTPase	PROSITE	PS51421	RAS	coord: 10..222 score: 16.318171
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 8..220 e-value: 9.0E-70 score: 236.0
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 11..182
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 15..172 e-value: 1.3E-35 score: 120.5

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh01G002280.1	CmoCh01G002280.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005768	endosome
cellular_component	GO:0005794	Golgi apparatus
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding