CmoCh01G001770 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh01G001770
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Ribonuclease 3-like protein 1
Location	Cmo_Chr01: 775031 .. 776735 (+)
RNA-Seq Expression	CmoCh01G001770
Synteny	CmoCh01G001770

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGGGGGTGGAGACGGAGTATCAGGTGAAGCCAAAGGTGGCTGCTGATAAACTGGAGGAGCTGGCTGCTGATAAACTGGAGGAGCTGGCTGCCGATAAATTGGAGGAGCTGGCTGCCGATAAACTGGAGGAGCTGGCTGCTGATAAACTGGAGGAGGGGAAGAAACTAAGGGGGCCGGTTGCTGCTGATAAACTGGAGGAGGGGAAGAAACTAAAGGGGGCAGAGAAGGCCTTGAGGGTGACAAAAATGGGTTATCTGAAGGGGAGGTTGGGAAAGGCCACTGGCCACAGGCTCCAAACAAGTATCGGTAAAAAGGATCACAGTTGGATCCTCTGCTTCTGGGCTTGCTTCTGCTTCTGCTTCTGGGTTTGCTTCTCTTTTCTTCATCTTTCCACCCTTTTCTTTCATGTTGATTCTGCTTTTGTTCAGTATCTGCTTCTACAGGTACTTGTTGAGAGATCAGCAGCAGAGCTAAAAGTGCTGCTATCACTACAGTAAGCTTCATTTATGTTTCTTCGGTCATAATCTTGTATGCATTTTGGTGATGTTATATGTTCCATGTAGAAAAAGGGGCTTATATAGAACAATAGAATAGACTGGTTTGTTTTGTTTTGTTTTGTTTCGACCATAGCATGCCTTGAAGTTCGCAATTACAACGTTGATTTCTATACCATTTATGTTTTGACTTCTTGAGTTTCAAAGCAGCACAACTCTGATATTTATTAATGCTGCAGCAGCACAGTGAATTAATAGACATGGCTCTCAATAGTCACTGCTTGCTACCTTCAAATTTGCGACTTCCAATGCTAATTTATGGAAGTATTCTCTCTCTGAGTAGTTGAATGTTGCACAGAAAACTATTTCTCTCTCTGAGTAGTTGAATGTTGAAGCCAAAAATTTATGGATAAAATACATTTTTATTTTTGGTGTATTTGAATTTGATTTCTAGTTGTTTCCTACGGTTTGAAATTAGTTTTTAATTGGTCTCTAGAATTTGAAATTGGTTTCTAGTTTATGAAAGATAAAAACCTTCTTTCATTTTCAGTTTACATTGGTCCTTAGAATTAGAATTAGAATTCTAATTTTCTTTCGTTTTCAACTTGAATAAATCACAAACTAACGATTAATCCTATGACAGATCATAGAAAACGACGATACCTTACTTGAAAATCTGTCCTCTAAGAACCTCCTCTGCAAATACTCCATGGCCTCTGCCTTCTCAAGCTGGCTGTGCAGCTATGGCGCCAAGTCTAAGCTCGTCAGAATCGTCCATCCCGGCGGTCACATAGAGCTCCACGACGGTCCCATCCGGGCGGCGGAGATCATGCTCCGAAACCCAGAATTCTCCCTCACTCACTCCCAATCAGCTAATCATCCATGGGCCATCGTCTCGCCGGACACGACGCTCATGCTGGGCTGCAAATACTACCTCTTACCTGAAAACAGCGTGGGAAACCCCCAGAAGATGAAGGAAAATGGAGGGTTGGAATCGGATTGTTTGAATGGCGGAAAGTGTATGATGTGTTTTGTTCCAAAGGAGAAGGGCGAGAGAACTGTGAGGTGGGAAAGTGGTGATGATTTGAAGGGGAATGACAAGAGGGTATTTTTGCAAAATGGGAATATTAGAGGGTCTCCCAAGAGACCATTTGGGTCATCTGATAATTGGGAACCAAATTTGAATAGCATCTCTGAAGAATATTAG

mRNA sequence

ATGAAGGGGGTGGAGACGGAGTATCAGGTGAAGCCAAAGGTGGCTGCTGATAAACTGGAGGAGCTGGCTGCTGATAAACTGGAGGAGCTGGCTGCCGATAAATTGGAGGAGCTGGCTGCCGATAAACTGGAGGAGCTGGCTGCTGATAAACTGGAGGAGGGGAAGAAACTAAGGGGGCCGGTTGCTGCTGATAAACTGGAGGAGGGGAAGAAACTAAAGGGGGCAGAGAAGGCCTTGAGGGTGACAAAAATGGGTTATCTGAAGGGGAGGTTGGGAAAGGCCACTGGCCACAGGCTCCAAACAAGTATCGGTAAAAAGGATCACAGTTGGATCCTCTGCTTCTGGGCTTGCTTCTGCTTCTGCTTCTGGGTTTGCTTCTCTTTTCTTCATCTTTCCACCCTTTTCTTTCATGTTGATTCTGCTTTTGTTCAGTATCTGCTTCTACAGATCATAGAAAACGACGATACCTTACTTGAAAATCTGTCCTCTAAGAACCTCCTCTGCAAATACTCCATGGCCTCTGCCTTCTCAAGCTGGCTGTGCAGCTATGGCGCCAAGTCTAAGCTCGTCAGAATCGTCCATCCCGGCGGTCACATAGAGCTCCACGACGGTCCCATCCGGGCGGCGGAGATCATGCTCCGAAACCCAGAATTCTCCCTCACTCACTCCCAATCAGCTAATCATCCATGGGCCATCGTCTCGCCGGACACGACGCTCATGCTGGGCTGCAAATACTACCTCTTACCTGAAAACAGCGTGGGAAACCCCCAGAAGATGAAGGAAAATGGAGGGTTGGAATCGGATTGTTTGAATGGCGGAAAGTGTATGATGTGTTTTGTTCCAAAGGAGAAGGGCGAGAGAACTGTGAGGTGGGAAAGTGGTGATGATTTGAAGGGGAATGACAAGAGGGTATTTTTGCAAAATGGGAATATTAGAGGGTCTCCCAAGAGACCATTTGGGTCATCTGATAATTGGGAACCAAATTTGAATAGCATCTCTGAAGAATATTAG

Coding sequence (CDS)

ATGAAGGGGGTGGAGACGGAGTATCAGGTGAAGCCAAAGGTGGCTGCTGATAAACTGGAGGAGCTGGCTGCTGATAAACTGGAGGAGCTGGCTGCCGATAAATTGGAGGAGCTGGCTGCCGATAAACTGGAGGAGCTGGCTGCTGATAAACTGGAGGAGGGGAAGAAACTAAGGGGGCCGGTTGCTGCTGATAAACTGGAGGAGGGGAAGAAACTAAAGGGGGCAGAGAAGGCCTTGAGGGTGACAAAAATGGGTTATCTGAAGGGGAGGTTGGGAAAGGCCACTGGCCACAGGCTCCAAACAAGTATCGGTAAAAAGGATCACAGTTGGATCCTCTGCTTCTGGGCTTGCTTCTGCTTCTGCTTCTGGGTTTGCTTCTCTTTTCTTCATCTTTCCACCCTTTTCTTTCATGTTGATTCTGCTTTTGTTCAGTATCTGCTTCTACAGATCATAGAAAACGACGATACCTTACTTGAAAATCTGTCCTCTAAGAACCTCCTCTGCAAATACTCCATGGCCTCTGCCTTCTCAAGCTGGCTGTGCAGCTATGGCGCCAAGTCTAAGCTCGTCAGAATCGTCCATCCCGGCGGTCACATAGAGCTCCACGACGGTCCCATCCGGGCGGCGGAGATCATGCTCCGAAACCCAGAATTCTCCCTCACTCACTCCCAATCAGCTAATCATCCATGGGCCATCGTCTCGCCGGACACGACGCTCATGCTGGGCTGCAAATACTACCTCTTACCTGAAAACAGCGTGGGAAACCCCCAGAAGATGAAGGAAAATGGAGGGTTGGAATCGGATTGTTTGAATGGCGGAAAGTGTATGATGTGTTTTGTTCCAAAGGAGAAGGGCGAGAGAACTGTGAGGTGGGAAAGTGGTGATGATTTGAAGGGGAATGACAAGAGGGTATTTTTGCAAAATGGGAATATTAGAGGGTCTCCCAAGAGACCATTTGGGTCATCTGATAATTGGGAACCAAATTTGAATAGCATCTCTGAAGAATATTAG

Protein sequence

MKGVETEYQVKPKVAADKLEELAADKLEELAADKLEELAADKLEELAADKLEEGKKLRGPVAADKLEEGKKLKGAEKALRVTKMGYLKGRLGKATGHRLQTSIGKKDHSWILCFWACFCFCFWVCFSFLHLSTLFFHVDSAFVQYLLLQIIENDDTLLENLSSKNLLCKYSMASAFSSWLCSYGAKSKLVRIVHPGGHIELHDGPIRAAEIMLRNPEFSLTHSQSANHPWAIVSPDTTLMLGCKYYLLPENSVGNPQKMKENGGLESDCLNGGKCMMCFVPKEKGERTVRWESGDDLKGNDKRVFLQNGNIRGSPKRPFGSSDNWEPNLNSISEEY

Homology

[Close]

BLAST of CmoCh01G001770 vs. ExPASy TrEMBL
Match: A0A6J1G9G0 (uncharacterized protein LOC111452155 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111452155 PE=4 SV=1)

HSP 1 Score: 398.3 bits (1022), Expect = 3.2e-107
Identity = 188/191 (98.43%), Postives = 190/191 (99.48%), Query Frame = 0


Query: 146 LLLQIIENDDTLLENLSSKNLLCKYSMASAFSSWLCSYGAKSKLVRIVHPGGHIELHDGP 205
           +L+ IIENDDTLLENLSSKNLLCKYSMASAFSSWLCSYGAKSKLVRIVHPGGHIELHDGP
Sbjct: 17  MLIYIIENDDTLLENLSSKNLLCKYSMASAFSSWLCSYGAKSKLVRIVHPGGHIELHDGP 76

Query: 206 IRAAEIMLRNPEFSLTHSQSANHPWAIVSPDTTLMLGCKYYLLPENSVGNPQKMKENGGL 265
           IRAAEIMLRNPEFSLTHSQSANHPWAIVSPDTTLMLGCKYYLLPENSVGNPQKMKENGGL
Sbjct: 77  IRAAEIMLRNPEFSLTHSQSANHPWAIVSPDTTLMLGCKYYLLPENSVGNPQKMKENGGL 136

Query: 266 ESDCLNGGKCMMCFVPKEKGERTVRWESGDDLKGNDKRVFLQNGNIRGSPKRPFGSSDNW 325
           ESDCLNGGKCMMCFVPKEKGERTVRWESGDDLKGNDKRVFLQNGNIRGSPKRPFGSSDNW
Sbjct: 137 ESDCLNGGKCMMCFVPKEKGERTVRWESGDDLKGNDKRVFLQNGNIRGSPKRPFGSSDNW 196

Query: 326 EPNLNSISEEY 337
           EPNLNSISEEY
Sbjct: 197 EPNLNSISEEY 207

[Close]

BLAST of CmoCh01G001770 vs. ExPASy TrEMBL
Match: A0A6J1K9X0 (uncharacterized protein LOC111492985 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111492985 PE=4 SV=1)

HSP 1 Score: 371.3 bits (952), Expect = 4.2e-99
Identity = 179/192 (93.23%), Postives = 183/192 (95.31%), Query Frame = 0


Query: 146 LLLQIIENDDTLLENLSSKNLLCKYSMASAFSSWLCSYGAKSKLVRIVHPGGHIELHDGP 205
           +L+ IIENDDTLLENLSSKNLLCKYSM+SAFSSWLCSYGAKSKLVRIVHP GHIELHD P
Sbjct: 17  MLIYIIENDDTLLENLSSKNLLCKYSMSSAFSSWLCSYGAKSKLVRIVHPSGHIELHDSP 76

Query: 206 IRAAEIMLRNPEFSLTHSQSANHPWAIVSPDTTLMLGCKYYLLPENSVGNPQKMKENGGL 265
           I AAEIMLRNPEFSLTHSQSANHPWAIVSPDTTLML CKY LLPENSVGNPQKMKEN GL
Sbjct: 77  IWAAEIMLRNPEFSLTHSQSANHPWAIVSPDTTLMLCCKYDLLPENSVGNPQKMKENEGL 136

Query: 266 ESDCLNGGKCMMCFVPKEKGERTVRWESGDDLKGNDKR-VFLQNGNIRGSPKRPFGSSDN 325
           ESDCLN GKCMMCFVPKEKGERTVRWESGDDLKGNDKR +FLQNGNIRGSPKRPFGSSDN
Sbjct: 137 ESDCLNDGKCMMCFVPKEKGERTVRWESGDDLKGNDKRGIFLQNGNIRGSPKRPFGSSDN 196

Query: 326 WEPNLNSISEEY 337
           WEPNLNSISEEY
Sbjct: 197 WEPNLNSISEEY 208

[Close]

BLAST of CmoCh01G001770 vs. ExPASy TrEMBL
Match: A0A6J1GA04 (uncharacterized protein LOC111452155 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111452155 PE=4 SV=1)

HSP 1 Score: 354.8 bits (909), Expect = 4.1e-94
Identity = 165/165 (100.00%), Postives = 165/165 (100.00%), Query Frame = 0


Query: 172 MASAFSSWLCSYGAKSKLVRIVHPGGHIELHDGPIRAAEIMLRNPEFSLTHSQSANHPWA 231
           MASAFSSWLCSYGAKSKLVRIVHPGGHIELHDGPIRAAEIMLRNPEFSLTHSQSANHPWA
Sbjct: 1   MASAFSSWLCSYGAKSKLVRIVHPGGHIELHDGPIRAAEIMLRNPEFSLTHSQSANHPWA 60

Query: 232 IVSPDTTLMLGCKYYLLPENSVGNPQKMKENGGLESDCLNGGKCMMCFVPKEKGERTVRW 291
           IVSPDTTLMLGCKYYLLPENSVGNPQKMKENGGLESDCLNGGKCMMCFVPKEKGERTVRW
Sbjct: 61  IVSPDTTLMLGCKYYLLPENSVGNPQKMKENGGLESDCLNGGKCMMCFVPKEKGERTVRW 120

Query: 292 ESGDDLKGNDKRVFLQNGNIRGSPKRPFGSSDNWEPNLNSISEEY 337
           ESGDDLKGNDKRVFLQNGNIRGSPKRPFGSSDNWEPNLNSISEEY
Sbjct: 121 ESGDDLKGNDKRVFLQNGNIRGSPKRPFGSSDNWEPNLNSISEEY 165

[Close]

BLAST of CmoCh01G001770 vs. ExPASy TrEMBL
Match: A0A6J1K7L4 (uncharacterized protein LOC111492985 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111492985 PE=4 SV=1)

HSP 1 Score: 327.8 bits (839), Expect = 5.3e-86
Identity = 156/166 (93.98%), Postives = 158/166 (95.18%), Query Frame = 0


Query: 172 MASAFSSWLCSYGAKSKLVRIVHPGGHIELHDGPIRAAEIMLRNPEFSLTHSQSANHPWA 231
           M+SAFSSWLCSYGAKSKLVRIVHP GHIELHD PI AAEIMLRNPEFSLTHSQSANHPWA
Sbjct: 1   MSSAFSSWLCSYGAKSKLVRIVHPSGHIELHDSPIWAAEIMLRNPEFSLTHSQSANHPWA 60

Query: 232 IVSPDTTLMLGCKYYLLPENSVGNPQKMKENGGLESDCLNGGKCMMCFVPKEKGERTVRW 291
           IVSPDTTLML CKY LLPENSVGNPQKMKEN GLESDCLN GKCMMCFVPKEKGERTVRW
Sbjct: 61  IVSPDTTLMLCCKYDLLPENSVGNPQKMKENEGLESDCLNDGKCMMCFVPKEKGERTVRW 120

Query: 292 ESGDDLKGNDKR-VFLQNGNIRGSPKRPFGSSDNWEPNLNSISEEY 337
           ESGDDLKGNDKR +FLQNGNIRGSPKRPFGSSDNWEPNLNSISEEY
Sbjct: 121 ESGDDLKGNDKRGIFLQNGNIRGSPKRPFGSSDNWEPNLNSISEEY 166

[Close]

BLAST of CmoCh01G001770 vs. ExPASy TrEMBL
Match: A0A067E3X2 (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g047773mg PE=4 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 2.6e-24
Identity = 75/202 (37.13%), Postives = 102/202 (50.50%), Query Frame = 0


Query: 175 AFSSWLCSYGAKSKLVRIVHPGGHIELHDGPIRAAEIMLRNPEFSLTHSQSANHPWAIVS 234
           AFSSWLC+   K+ LV+IVHPGGH+ELHD PI A EIMLRNP+  + H      PWAIV+
Sbjct: 2   AFSSWLCTNNTKNLLVKIVHPGGHVELHDRPIMATEIMLRNPKCIVAHPNVFKQPWAIVA 61

Query: 235 PDTTLMLGCKYYLLPE---------NSVGNPQKM--------KENGGLES---------- 294
           PDT L LG K+Y++P          NS  +PQK+        +EN   +S          
Sbjct: 62  PDTVLSLGQKFYVVPVSTIRKLQRLNSAKHPQKVQSSMNKDGEENESRDSRRSWKTADSP 121

Query: 295 ---DCLNGGKCMMCFVPKEKGE------RTVRWESGDDLKGNDKRVFL----QNGNIRGS 337
               C +   C+M  +   K E       + R  S      ++ R            +GS
Sbjct: 122 GKNRCFSDDNCLMSMITGSKVEGSNGDNSSERASSSSSFSSSETRGLTCRKRSKDFTKGS 181

[Close]

BLAST of CmoCh01G001770 vs. NCBI nr
Match: XP_022948492.1 (uncharacterized protein LOC111452155 isoform X1 [Cucurbita moschata] >XP_022948493.1 uncharacterized protein LOC111452155 isoform X1 [Cucurbita moschata] >XP_022948494.1 uncharacterized protein LOC111452155 isoform X1 [Cucurbita moschata])

HSP 1 Score: 398.3 bits (1022), Expect = 6.7e-107
Identity = 188/191 (98.43%), Postives = 190/191 (99.48%), Query Frame = 0


Query: 146 LLLQIIENDDTLLENLSSKNLLCKYSMASAFSSWLCSYGAKSKLVRIVHPGGHIELHDGP 205
           +L+ IIENDDTLLENLSSKNLLCKYSMASAFSSWLCSYGAKSKLVRIVHPGGHIELHDGP
Sbjct: 17  MLIYIIENDDTLLENLSSKNLLCKYSMASAFSSWLCSYGAKSKLVRIVHPGGHIELHDGP 76

Query: 206 IRAAEIMLRNPEFSLTHSQSANHPWAIVSPDTTLMLGCKYYLLPENSVGNPQKMKENGGL 265
           IRAAEIMLRNPEFSLTHSQSANHPWAIVSPDTTLMLGCKYYLLPENSVGNPQKMKENGGL
Sbjct: 77  IRAAEIMLRNPEFSLTHSQSANHPWAIVSPDTTLMLGCKYYLLPENSVGNPQKMKENGGL 136

Query: 266 ESDCLNGGKCMMCFVPKEKGERTVRWESGDDLKGNDKRVFLQNGNIRGSPKRPFGSSDNW 325
           ESDCLNGGKCMMCFVPKEKGERTVRWESGDDLKGNDKRVFLQNGNIRGSPKRPFGSSDNW
Sbjct: 137 ESDCLNGGKCMMCFVPKEKGERTVRWESGDDLKGNDKRVFLQNGNIRGSPKRPFGSSDNW 196

Query: 326 EPNLNSISEEY 337
           EPNLNSISEEY
Sbjct: 197 EPNLNSISEEY 207

[Close]

BLAST of CmoCh01G001770 vs. NCBI nr
Match: XP_023523993.1 (uncharacterized protein LOC111788070 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 396.7 bits (1018), Expect = 1.9e-106
Identity = 187/191 (97.91%), Postives = 190/191 (99.48%), Query Frame = 0


Query: 146 LLLQIIENDDTLLENLSSKNLLCKYSMASAFSSWLCSYGAKSKLVRIVHPGGHIELHDGP 205
           +L+ IIENDDTLLENLSSKNLLCKYSMASAFSSWLCSYGAKSKLVRIVHPGGHIELHDGP
Sbjct: 27  MLIYIIENDDTLLENLSSKNLLCKYSMASAFSSWLCSYGAKSKLVRIVHPGGHIELHDGP 86

Query: 206 IRAAEIMLRNPEFSLTHSQSANHPWAIVSPDTTLMLGCKYYLLPENSVGNPQKMKENGGL 265
           IRAAEIMLRNPEFSLTHSQSANHPWAIVSPDTTLMLGCKYYLLPENSVGNPQKMKENGGL
Sbjct: 87  IRAAEIMLRNPEFSLTHSQSANHPWAIVSPDTTLMLGCKYYLLPENSVGNPQKMKENGGL 146

Query: 266 ESDCLNGGKCMMCFVPKEKGERTVRWESGDDLKGNDKRVFLQNGNIRGSPKRPFGSSDNW 325
           ESDCLNGGKCMMCFVPKEKGER+VRWESGDDLKGNDKRVFLQNGNIRGSPKRPFGSSDNW
Sbjct: 147 ESDCLNGGKCMMCFVPKEKGERSVRWESGDDLKGNDKRVFLQNGNIRGSPKRPFGSSDNW 206

Query: 326 EPNLNSISEEY 337
           EPNLNSISEEY
Sbjct: 207 EPNLNSISEEY 217

[Close]

BLAST of CmoCh01G001770 vs. NCBI nr
Match: XP_023523994.1 (uncharacterized protein LOC111788070 isoform X2 [Cucurbita pepo subsp. pepo] >XP_023523995.1 uncharacterized protein LOC111788070 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 396.7 bits (1018), Expect = 1.9e-106
Identity = 187/191 (97.91%), Postives = 190/191 (99.48%), Query Frame = 0


Query: 146 LLLQIIENDDTLLENLSSKNLLCKYSMASAFSSWLCSYGAKSKLVRIVHPGGHIELHDGP 205
           +L+ IIENDDTLLENLSSKNLLCKYSMASAFSSWLCSYGAKSKLVRIVHPGGHIELHDGP
Sbjct: 17  MLIYIIENDDTLLENLSSKNLLCKYSMASAFSSWLCSYGAKSKLVRIVHPGGHIELHDGP 76

Query: 206 IRAAEIMLRNPEFSLTHSQSANHPWAIVSPDTTLMLGCKYYLLPENSVGNPQKMKENGGL 265
           IRAAEIMLRNPEFSLTHSQSANHPWAIVSPDTTLMLGCKYYLLPENSVGNPQKMKENGGL
Sbjct: 77  IRAAEIMLRNPEFSLTHSQSANHPWAIVSPDTTLMLGCKYYLLPENSVGNPQKMKENGGL 136

Query: 266 ESDCLNGGKCMMCFVPKEKGERTVRWESGDDLKGNDKRVFLQNGNIRGSPKRPFGSSDNW 325
           ESDCLNGGKCMMCFVPKEKGER+VRWESGDDLKGNDKRVFLQNGNIRGSPKRPFGSSDNW
Sbjct: 137 ESDCLNGGKCMMCFVPKEKGERSVRWESGDDLKGNDKRVFLQNGNIRGSPKRPFGSSDNW 196

Query: 326 EPNLNSISEEY 337
           EPNLNSISEEY
Sbjct: 197 EPNLNSISEEY 207

[Close]

BLAST of CmoCh01G001770 vs. NCBI nr
Match: XP_022998311.1 (uncharacterized protein LOC111492985 isoform X1 [Cucurbita maxima])

HSP 1 Score: 371.3 bits (952), Expect = 8.7e-99
Identity = 179/192 (93.23%), Postives = 183/192 (95.31%), Query Frame = 0


Query: 146 LLLQIIENDDTLLENLSSKNLLCKYSMASAFSSWLCSYGAKSKLVRIVHPGGHIELHDGP 205
           +L+ IIENDDTLLENLSSKNLLCKYSM+SAFSSWLCSYGAKSKLVRIVHP GHIELHD P
Sbjct: 17  MLIYIIENDDTLLENLSSKNLLCKYSMSSAFSSWLCSYGAKSKLVRIVHPSGHIELHDSP 76

Query: 206 IRAAEIMLRNPEFSLTHSQSANHPWAIVSPDTTLMLGCKYYLLPENSVGNPQKMKENGGL 265
           I AAEIMLRNPEFSLTHSQSANHPWAIVSPDTTLML CKY LLPENSVGNPQKMKEN GL
Sbjct: 77  IWAAEIMLRNPEFSLTHSQSANHPWAIVSPDTTLMLCCKYDLLPENSVGNPQKMKENEGL 136

Query: 266 ESDCLNGGKCMMCFVPKEKGERTVRWESGDDLKGNDKR-VFLQNGNIRGSPKRPFGSSDN 325
           ESDCLN GKCMMCFVPKEKGERTVRWESGDDLKGNDKR +FLQNGNIRGSPKRPFGSSDN
Sbjct: 137 ESDCLNDGKCMMCFVPKEKGERTVRWESGDDLKGNDKRGIFLQNGNIRGSPKRPFGSSDN 196

Query: 326 WEPNLNSISEEY 337
           WEPNLNSISEEY
Sbjct: 197 WEPNLNSISEEY 208

[Close]

BLAST of CmoCh01G001770 vs. NCBI nr
Match: XP_022948495.1 (uncharacterized protein LOC111452155 isoform X2 [Cucurbita moschata] >KAG6606824.1 hypothetical protein SDJN03_00166, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 354.8 bits (909), Expect = 8.4e-94
Identity = 165/165 (100.00%), Postives = 165/165 (100.00%), Query Frame = 0


Query: 172 MASAFSSWLCSYGAKSKLVRIVHPGGHIELHDGPIRAAEIMLRNPEFSLTHSQSANHPWA 231
           MASAFSSWLCSYGAKSKLVRIVHPGGHIELHDGPIRAAEIMLRNPEFSLTHSQSANHPWA
Sbjct: 1   MASAFSSWLCSYGAKSKLVRIVHPGGHIELHDGPIRAAEIMLRNPEFSLTHSQSANHPWA 60

Query: 232 IVSPDTTLMLGCKYYLLPENSVGNPQKMKENGGLESDCLNGGKCMMCFVPKEKGERTVRW 291
           IVSPDTTLMLGCKYYLLPENSVGNPQKMKENGGLESDCLNGGKCMMCFVPKEKGERTVRW
Sbjct: 61  IVSPDTTLMLGCKYYLLPENSVGNPQKMKENGGLESDCLNGGKCMMCFVPKEKGERTVRW 120

Query: 292 ESGDDLKGNDKRVFLQNGNIRGSPKRPFGSSDNWEPNLNSISEEY 337
           ESGDDLKGNDKRVFLQNGNIRGSPKRPFGSSDNWEPNLNSISEEY
Sbjct: 121 ESGDDLKGNDKRVFLQNGNIRGSPKRPFGSSDNWEPNLNSISEEY 165

[Close]

BLAST of CmoCh01G001770 vs. TAIR 10
Match: AT2G30230.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G06980.1); Has 167 Blast hits to 167 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 167; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 53.1 bits (126), Expect = 4.9e-07
Identity = 45/164 (27.44%), Postives = 71/164 (43.29%), Query Frame = 0


Query: 189 LVRIVHPGGHIELHDGPIRAAEIMLRNPEFSLTH--SQSANHPWAIVSPDTTLMLGCKYY 248
           L+RIVH  GH++    P+ A EI+  NP   L+   SQ       I+SP++ L  G  Y+
Sbjct: 20  LIRIVHLNGHVDEITSPMTAGEILQANPNHVLSKPCSQGVVRKILILSPESELKRGSIYF 79

Query: 249 LLPENSVGNPQKMK------------ENGG-LESDCLNGGKCM--MCFVPKEKGERTVRW 308
           L+P+ S+   +K K            E+G  + SD ++  K +   C    EK    V  
Sbjct: 80  LIPDTSMPEKKKTKKRKELRCRKKPLESGNDINSDHVSTNKDLDGHCLTLCEKYLEDVML 139

Query: 309 ESGDDLKGNDKRVFLQNGNIRGSPKRPFGSSDNWEPNLNSISEE 336
                  G + R   ++            S   W P+L+SI+E+
Sbjct: 140 SEKMSSAGKENRHRRKHSR--------SASVSTWRPHLDSITED 175

[Close]

BLAST of CmoCh01G001770 vs. TAIR 10
Match: AT1G06980.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: sepal, male gametophyte, carpel; EXPRESSED DURING: 4 anthesis; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G30230.1); Has 159 Blast hits to 159 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 159; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 47.4 bits (111), Expect = 2.7e-05
Identity = 25/76 (32.89%), Postives = 43/76 (56.58%), Query Frame = 0


Query: 189 LVRIVHPGGHIELHDGPIRAAEIMLRNPEFSLTH--SQSANHPWAIVSPDTTLMLGCKYY 248
           L+RIVH  G++E     I A EI+  NP   L+   SQ       I+SP++ L  G  Y+
Sbjct: 20  LIRIVHLNGYVEEITRSITAGEILQANPNHVLSKPCSQGVVRKILILSPESELKRGSIYF 79

Query: 249 LLPENSVGNPQKMKEN 263
           L+P++S+   ++ +++
Sbjct: 80  LIPDSSLPEKKRRRKD 95

The following BLAST results are available for this feature:

BLAST of CmoCh01G001770 vs.


Match Name	E-value	Identity	Description

BLAST of CmoCh01G001770 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G9G0	3.2e-107	98.43	uncharacterized protein LOC111452155 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1K9X0	4.2e-99	93.23	uncharacterized protein LOC111492985 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1GA04	4.1e-94	100.00	uncharacterized protein LOC111452155 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1K7L4	5.3e-86	93.98	uncharacterized protein LOC111492985 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A067E3X2	2.6e-24	37.13	Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g047773mg PE=4 SV=1	[more]

BLAST of CmoCh01G001770 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022948492.1	6.7e-107	98.43	uncharacterized protein LOC111452155 isoform X1 [Cucurbita moschata] >XP_0229484...	[more]
XP_023523993.1	1.9e-106	97.91	uncharacterized protein LOC111788070 isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_023523994.1	1.9e-106	97.91	uncharacterized protein LOC111788070 isoform X2 [Cucurbita pepo subsp. pepo] >XP...	[more]
XP_022998311.1	8.7e-99	93.23	uncharacterized protein LOC111492985 isoform X1 [Cucurbita maxima]	[more]
XP_022948495.1	8.4e-94	100.00	uncharacterized protein LOC111452155 isoform X2 [Cucurbita moschata] >KAG6606824...	[more]

BLAST of CmoCh01G001770 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G30230.1	4.9e-07	27.44	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G06980.1	2.7e-05	32.89	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 16..52
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 314..336
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 292..336
None	No IPR available	PANTHER	PTHR33052:SF24	OS06G0568400 PROTEIN	coord: 175..262
None	No IPR available	PANTHER	PTHR33052	DUF4228 DOMAIN PROTEIN-RELATED	coord: 175..262
IPR025322	Protein of unknown function DUF4228, plant	PFAM	PF14009	DUF4228	coord: 183..334 e-value: 3.2E-19 score: 70.1

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh01G001770.1	CmoCh01G001770.1	mRNA