CmoCh01G001670 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh01G001670
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Protein FAR1-RELATED SEQUENCE
Location	Cmo_Chr01: 721064 .. 724194 (-)
RNA-Seq Expression	CmoCh01G001670
Synteny	CmoCh01G001670

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGCTACGAAGACGAGTTACGGCTGTGGAGAAGCCAACAGATAGGCTACGAGTTCGCTCCTCAAAAGTAAGGCGCTTTCTAGGTTTCTTTTTCTTTGGCTGAGTCGATGGAATCGATGAGTTACACTTTCAATCTCGTGTTGTTTTACACTTCCCCCCCCCCCCCCCCCCCCCCCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCCCCCCCCCCCTTTTACTCTTCTTATCGAAATGGAATTCAACTAAGCTGCGATTTGGATATAGAAGCCGAAATCCGGATCGGAACTTTCGAAATTCTGTGGATCCATACCTAACGACGAATGATTCCAACAATTGGAGTTTGTTCTTCTGAATCTTTTTCTTTACGTAGAAATAGTTGATTGTTTCATCTCGAGTAGATGGATGGAGTTTCTCTCAACACTGATCCTGTGGGCGATGAGGAGGCAGATTATTTTGAGATCGAAGGGGATTCTGTACTTGCAGATTATGTTGATCAAACTGGTATGTTTCAAGGAGAAAATCCCCTTCCTCCTGCTGTGGGTATGGAGTTTGAGTCTTATGAGGATGTGTACTACTTTTACAGTTGCTATGCAAAAGAACAGGGATTCGGAGTCCGAGTTAGTAACACTTGGTATAGGAAGAGTAAGGAAAGGTACAGAGGAAAACTTAGCTGTAGCAGTGCAGGTTTCAAGAAGAAGAGTGAAGCGAACCGACCGAGACCAGAAACAAGAACTGGCTGCCCTGCTATGATAAAATTTAGGTTAATGGACACCAGAAGGTGGAGAATAATTGAAGTTGAGCTTGATCACAATCACTTAATCAACCCAACTAGTGGGAAGTTTTATAAATCTCATAAGAACTTGGGTGTTGGAACCAAAAGATTGTTGCAGTTAGATAGTGCTGAAGAAGTGCAAAAAGTTAGACTATTTCGAACGGTTGTAGTTGATGCTGATCACAATGGATTCTTGGATGTTGATGAAGGAGAATTTGGAAATAGTGTTGATGATTCCAATCAATTGAAATTTAACGAAGGTGATGCTGTAGCTGTTGAAGATTTTTTATGTCAAGCACAACTGACAGATTCAAATTTTTTCTATGTTGTGGATCTCAATGAGAAAGGATCTCTGATGAATTTGTTTTGGGTTTCTTCAAGGTCGAAGGCTGCGTATAATTATTTTGGTGATGTTGTGTACATTGACACATCATGTTTAGCAAACAAATATGAAGTCCCATTGGTTTCAATTATTGGAATAAACCATCATGGGCAGTCTGTATTATTTGGTTGTGGTTTACTTGCCATGGAGGCAGCAGAATCATATATATGGTTGTTTAGAGCATGGCTTACCTCTATTCTAGGACGACCTCCACAAGTAATCATTGCAGATCAATGTGTAGCGCTGCAAATTGCTCTTGCTGATGTCTTTCCCAGAGCTTATCATTGCATTTCTTTATCTGATATTATGAGAAAAGTTCCACAGAAGCTAGGAAGCCTGATCGAATACGAAGAAATCGAAACTGCTATCTGTAAAGCAGTTTACCACTCCTCAAAGCCAGAACAATTTGAGGCAGTCTGGGAGGGTATGATCCAGCAGCACATGCTTGGAGATCATAAATGGCTCCAAGCGATTTACGAGGATCGGAGACGGTGGGTTCCAGTTTTCGTGAAGGATGTGTTCTTGGCTGGAGTGTTGTCAATACAATCCAGTGATACAGTTTCATGTTTCTTTCAAGAATATTTGGGTGTGCATACTTCTTTAAGAGAATTCCTTGCGAAGTATGATCGAGCTTTACAATCACGTTATCAGCTTGAAGCTTTGGCTGATGCAGATTCAAAAAGTTCAAGTTTCATGCTTAGATCAAGATGCTATTTTGAACTGCAGATTAGTAAATTGTATACCAATGAGATACTTAAAAAGTTCGAGAGGGAGGTGGAGGGAATGTATTCTTGTTTTAGCACCAGAAAGTTGAATGCTGAGGGGTCACTAGTGACGTATATTGTGAAGGAACATGTAGAAATGGAGGGAAGTAGGAGGGATGCAAGAGACTTTGAAGTTTTATATAATGAATCTGAGATGGAGGTCCAGTGCAATTGTGGCCTGTTCAACTCGAAAGGATATTTATGCAGACATACATTATCCGTTCTTAACCAGAACGGTATCGAGGAAATCCCGCCTCAGTATATCCTTCCACGATGGAGAAAAGACGTGAAAAGAAGCTACGTTCTCGATTATAGTTACAGTGGTATTGATATTAACAGCCAAATCCACAGGTATGACAACTTATACAGATCCATTGTGCAAGTCATTGAAGAAGGGAGAAAATCGAAAGAGCGATACGATATCGCAATACAGGGAATCAATGATATACTGAGCAAGCTTCGCCTTGGAACAAATCCTTCCAGTTAG

mRNA sequence

ATGGCGCTACGAAGACGAGTTACGGCTGTGGAGAAGCCAACAGATAGGCTACGAGTTCGCTCCTCAAAAATGGATGGAGTTTCTCTCAACACTGATCCTGTGGGCGATGAGGAGGCAGATTATTTTGAGATCGAAGGGGATTCTGTACTTGCAGATTATGTTGATCAAACTGTTGCTATGCAAAAGAACAGGGATTCGGAGTCCGAGTTAGTAACACTTGGTATAGGAAGAGTAAGGAAAGGTTTCAAGAAGAAGAGTGAAGCGAACCGACCGAGACCAGAAACAAGAACTGGCTGCCCTGCTATGATAAAATTTAGATCCATTGTGCAAGTCATTGAAGAAGGGAGAAAATCGAAAGAGCGATACGATATCGCAATACAGGGAATCAATGATATACTGAGCAAGCTTCGCCTTGGAACAAATCCTTCCAGTTAG

Coding sequence (CDS)

ATGGCGCTACGAAGACGAGTTACGGCTGTGGAGAAGCCAACAGATAGGCTACGAGTTCGCTCCTCAAAAATGGATGGAGTTTCTCTCAACACTGATCCTGTGGGCGATGAGGAGGCAGATTATTTTGAGATCGAAGGGGATTCTGTACTTGCAGATTATGTTGATCAAACTGTTGCTATGCAAAAGAACAGGGATTCGGAGTCCGAGTTAGTAACACTTGGTATAGGAAGAGTAAGGAAAGGTTTCAAGAAGAAGAGTGAAGCGAACCGACCGAGACCAGAAACAAGAACTGGCTGCCCTGCTATGATAAAATTTAGATCCATTGTGCAAGTCATTGAAGAAGGGAGAAAATCGAAAGAGCGATACGATATCGCAATACAGGGAATCAATGATATACTGAGCAAGCTTCGCCTTGGAACAAATCCTTCCAGTTAG

Protein sequence

MALRRRVTAVEKPTDRLRVRSSKMDGVSLNTDPVGDEEADYFEIEGDSVLADYVDQTVAMQKNRDSESELVTLGIGRVRKGFKKKSEANRPRPETRTGCPAMIKFRSIVQVIEEGRKSKERYDIAIQGINDILSKLRLGTNPSS

Homology

[Close]

BLAST of CmoCh01G001670 vs. ExPASy TrEMBL
Match: A0A6J1KFY1 (Protein FAR1-RELATED SEQUENCE OS=Cucurbita maxima OX=3661 GN=LOC111492869 PE=3 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 1.6e-18
Identity = 66/121 (54.55%), Postives = 69/121 (57.02%), Query Frame = 0


Query: 24  MDGVSLNTDPVGDEEADYFEIEGDSVLADYVDQTVAMQKNR----------DSESELVTL 83
           MDGVSLNTDPVGDEEADYFEIEGDSVLADYVDQT   Q             +S  ++   
Sbjct: 1   MDGVSLNTDPVGDEEADYFEIEGDSVLADYVDQTGMFQGENPLPPAVGMEFESYEDVYYF 60

Query: 84  --------GIG-------------RVR-------KGFKKKSEANRPRPETRTGCPAMIKF 107
                   G G             R R        GFKKKSEANRPRPETRTGCPAMIKF
Sbjct: 61  YSCYAKEQGFGVRVSNTWYRKSKERYRGKLSCSSAGFKKKSEANRPRPETRTGCPAMIKF 120

[Close]

BLAST of CmoCh01G001670 vs. ExPASy TrEMBL
Match: A0A6J1KFY1 (Protein FAR1-RELATED SEQUENCE OS=Cucurbita maxima OX=3661 GN=LOC111492869 PE=3 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 1.2e-10
Identity = 37/40 (92.50%), Postives = 40/40 (100.00%), Query Frame = 0


Query: 105 FRSIVQVIEEGRKSKERYDIAIQGINDILSKLRLGTNPSS 145
           +RSIVQVIEEGRKSKE+Y+IAIQGINDILSKLRLGTNPSS
Sbjct: 629 YRSIVQVIEEGRKSKEQYNIAIQGINDILSKLRLGTNPSS 668

HSP 2 Score: 102.4 bits (254), Expect = 1.6e-18
Identity = 66/121 (54.55%), Postives = 69/121 (57.02%), Query Frame = 0


Query: 24  MDGVSLNTDPVGDEEADYFEIEGDSVLADYVDQTVAMQKNR----------DSESELVTL 83
           MDGVSLNTDPVGDEEADYFEIEGDSVLADYVDQT   Q             +S  ++   
Sbjct: 1   MDGVSLNTDPVGDEEADYFEIEGDSVLADYVDQTGMFQGENPLPPAVGMEFESYEDVYYF 60

Query: 84  --------GIG-------------RVR-------KGFKKKSEANRPRPETRTGCPAMIKF 107
                   G G             R R        GFKKKSEANRPRPETRTGCPAMIKF
Sbjct: 61  YSCYAKEQGFGVRVSNTWYRKSKERYRGKLSCSSAGFKKKSEANRPRPETRTGCPAMIKF 120

[Close]

BLAST of CmoCh01G001670 vs. ExPASy TrEMBL
Match: A0A6J1G944 (Protein FAR1-RELATED SEQUENCE OS=Cucurbita moschata OX=3662 GN=LOC111452090 PE=3 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 1.1e-11
Identity = 39/40 (97.50%), Postives = 40/40 (100.00%), Query Frame = 0


Query: 105 FRSIVQVIEEGRKSKERYDIAIQGINDILSKLRLGTNPSS 145
           +RSIVQVIEEGRKSKERYDIAIQGINDILSKLRLGTNPSS
Sbjct: 629 YRSIVQVIEEGRKSKERYDIAIQGINDILSKLRLGTNPSS 668

HSP 2 Score: 96.3 bits (238), Expect = 1.1e-16
Identity = 64/121 (52.89%), Postives = 71/121 (58.68%), Query Frame = 0


Query: 24  MDGVSLNTDPVGDEEADYFEIEGDSVLADYVDQT----------VAMQKNRDSESELVTL 83
           MDGVSLNT+PVGDEE DYFEIEGDSV+ADYVDQ+           A+    +S  ++   
Sbjct: 1   MDGVSLNTEPVGDEEGDYFEIEGDSVIADYVDQSGIFEGENPLPPAVGMEFESYEDVYYF 60

Query: 84  --------GIG-RV-----RK--------------GFKKKSEANRPRPETRTGCPAMIKF 107
                   G G RV     RK              GFKKKSEANRPRPETRTGCPAMIKF
Sbjct: 61  YSCYAKEQGFGVRVSNTWYRKSKEKYRGKLSCSSAGFKKKSEANRPRPETRTGCPAMIKF 120

[Close]

BLAST of CmoCh01G001670 vs. ExPASy TrEMBL
Match: A0A0A0KVM3 (Protein FAR1-RELATED SEQUENCE OS=Cucumis sativus OX=3659 GN=Csa_4G006410 PE=3 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 3.3e-08
Identity = 33/40 (82.50%), Postives = 37/40 (92.50%), Query Frame = 0


Query: 105 FRSIVQVIEEGRKSKERYDIAIQGINDILSKLRLGTNPSS 145
           +RSIVQVIEEGRKSKE+Y IA+QGI DILSKLRLGT+ SS
Sbjct: 630 YRSIVQVIEEGRKSKEKYGIAVQGIKDILSKLRLGTDTSS 669

HSP 2 Score: 93.2 bits (230), Expect = 9.5e-16
Identity = 59/121 (48.76%), Postives = 68/121 (56.20%), Query Frame = 0


Query: 24  MDGVSLNTDPVGDEEADYFEIEGDSVLADYVDQTVAMQKNR----------DSESELVTL 83
           MDGVSLNT+PVGD++ADYFEIEGDSV+A+YVDQ    Q             +S  ++   
Sbjct: 1   MDGVSLNTEPVGDDDADYFEIEGDSVIAEYVDQAGIFQGENPLPPAVGMEFESYEDVYYF 60

Query: 84  --------GIG-------------RVR-------KGFKKKSEANRPRPETRTGCPAMIKF 107
                   G G             R R        GFKK+SEANRPRPETRTGCPAMIKF
Sbjct: 61  YSCYAKEQGFGVRVSNTWYRKSKERYRGKLSCSSAGFKKRSEANRPRPETRTGCPAMIKF 120

[Close]

BLAST of CmoCh01G001670 vs. ExPASy TrEMBL
Match: A0A6J1DHG7 (uncharacterized protein LOC111020950 OS=Momordica charantia OX=3673 GN=LOC111020950 PE=3 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 1.2e-10
Identity = 36/40 (90.00%), Postives = 40/40 (100.00%), Query Frame = 0


Query: 105 FRSIVQVIEEGRKSKERYDIAIQGINDILSKLRLGTNPSS 145
           ++SIVQVIEEGRKSK+RYDIAIQGINDILSKLRLGTNPS+
Sbjct: 629 YKSIVQVIEEGRKSKDRYDIAIQGINDILSKLRLGTNPSN 668

HSP 2 Score: 92.0 bits (227), Expect = 2.1e-15
Identity = 62/121 (51.24%), Postives = 69/121 (57.02%), Query Frame = 0


Query: 24  MDGVSLNTDPVGDEEADYFEIEGDSVLADYVDQT----------VAMQKNRDSESELVTL 83
           MDGVSLNT+PVG+EE DYFEIEGDS +ADYVDQ            A+    +S  ++   
Sbjct: 1   MDGVSLNTEPVGEEEGDYFEIEGDSEIADYVDQNGIFEGENPLPPAVGMEFESYEDVYYF 60

Query: 84  --------GIG-RV-----RK--------------GFKKKSEANRPRPETRTGCPAMIKF 107
                   G G RV     RK              GFKKKSEANRPRPETRTGCPAMIKF
Sbjct: 61  YSCYAKEQGFGVRVSNTWYRKSKEKYRGKLSCSSAGFKKKSEANRPRPETRTGCPAMIKF 120

[Close]

BLAST of CmoCh01G001670 vs. NCBI nr
Match: KAG7036521.1 (Protein FAR1-RELATED SEQUENCE 6, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 140.2 bits (352), Expect = 1.4e-29
Identity = 88/144 (61.11%), Postives = 91/144 (63.19%), Query Frame = 0


Query: 1   MALRRRVTAVEKPTDRLRVRSSKMDGVSLNTDPVGDEEADYFEIEGDSVLADYVDQTVAM 60
           MALRRRVTAVEKPTDR RVRSSKMDGVSLNTDPVGDEEADYFEIEGDSVLADYVDQT   
Sbjct: 1   MALRRRVTAVEKPTDRQRVRSSKMDGVSLNTDPVGDEEADYFEIEGDSVLADYVDQTGMF 60

Query: 61  QKNR----------DSESELVTL--------GIG-------------RVR-------KGF 107
           Q             +S  ++           G G             R R        GF
Sbjct: 61  QGENPLPPAVGMEFESYEDVYYFYSCYAKEQGFGVRVSNTWYRKSKERYRGKLSCSSAGF 120

[Close]

BLAST of CmoCh01G001670 vs. NCBI nr
Match: KAG7036521.1 (Protein FAR1-RELATED SEQUENCE 6, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 79.7 bits (195), Expect = 2.2e-11
Identity = 39/40 (97.50%), Postives = 40/40 (100.00%), Query Frame = 0


Query: 105 FRSIVQVIEEGRKSKERYDIAIQGINDILSKLRLGTNPSS 145
           +RSIVQVIEEGRKSKERYDIAIQGINDILSKLRLGTNPSS
Sbjct: 652 YRSIVQVIEEGRKSKERYDIAIQGINDILSKLRLGTNPSS 691

HSP 2 Score: 102.4 bits (254), Expect = 3.2e-18
Identity = 66/121 (54.55%), Postives = 69/121 (57.02%), Query Frame = 0


Query: 24  MDGVSLNTDPVGDEEADYFEIEGDSVLADYVDQTVAMQKNR----------DSESELVTL 83
           MDGVSLNTDPVGDEEADYFEIEGDSVLADYVDQT   Q             +S  ++   
Sbjct: 1   MDGVSLNTDPVGDEEADYFEIEGDSVLADYVDQTGMFQGENPLPPAVGMEFESYEDVYYF 60

Query: 84  --------GIG-------------RVR-------KGFKKKSEANRPRPETRTGCPAMIKF 107
                   G G             R R        GFKKKSEANRPRPETRTGCPAMIKF
Sbjct: 61  YSCYAKEQGFGVRVSNTWYRKSKERYRGKLSCSSAGFKKKSEANRPRPETRTGCPAMIKF 120

[Close]

BLAST of CmoCh01G001670 vs. NCBI nr
Match: XP_022948397.1 (protein FAR1-RELATED SEQUENCE 6-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 79.7 bits (195), Expect = 2.2e-11
Identity = 39/40 (97.50%), Postives = 40/40 (100.00%), Query Frame = 0


Query: 105 FRSIVQVIEEGRKSKERYDIAIQGINDILSKLRLGTNPSS 145
           +RSIVQVIEEGRKSKERYDIAIQGINDILSKLRLGTNPSS
Sbjct: 629 YRSIVQVIEEGRKSKERYDIAIQGINDILSKLRLGTNPSS 668

HSP 2 Score: 102.4 bits (254), Expect = 3.2e-18
Identity = 66/121 (54.55%), Postives = 69/121 (57.02%), Query Frame = 0


Query: 24  MDGVSLNTDPVGDEEADYFEIEGDSVLADYVDQTVAMQKNR----------DSESELVTL 83
           MDGVSLNTDPVGDEEADYFEIEGDSVLADYVDQT   Q             +S  ++   
Sbjct: 1   MDGVSLNTDPVGDEEADYFEIEGDSVLADYVDQTGMFQGENPLPPAVGMEFESYEDVYYF 60

Query: 84  --------GIG-------------RVR-------KGFKKKSEANRPRPETRTGCPAMIKF 107
                   G G             R R        GFKKKSEANRPRPETRTGCPAMIKF
Sbjct: 61  YSCYAKEQGFGVRVSNTWYRKSKERYRGKLSCSSAGFKKKSEANRPRPETRTGCPAMIKF 120

[Close]

BLAST of CmoCh01G001670 vs. NCBI nr
Match: XP_022998133.1 (protein FAR1-RELATED SEQUENCE 6-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 76.3 bits (186), Expect = 2.5e-10
Identity = 37/40 (92.50%), Postives = 40/40 (100.00%), Query Frame = 0


Query: 105 FRSIVQVIEEGRKSKERYDIAIQGINDILSKLRLGTNPSS 145
           +RSIVQVIEEGRKSKE+Y+IAIQGINDILSKLRLGTNPSS
Sbjct: 629 YRSIVQVIEEGRKSKEQYNIAIQGINDILSKLRLGTNPSS 668

HSP 2 Score: 102.4 bits (254), Expect = 3.2e-18
Identity = 66/121 (54.55%), Postives = 69/121 (57.02%), Query Frame = 0


Query: 24  MDGVSLNTDPVGDEEADYFEIEGDSVLADYVDQTVAMQKNR----------DSESELVTL 83
           MDGVSLNTDPVGDEEADYFEIEGDSVLADYVDQT   Q             +S  ++   
Sbjct: 1   MDGVSLNTDPVGDEEADYFEIEGDSVLADYVDQTGMFQGENPLPPAVGMEFESYEDVYYF 60

Query: 84  --------GIG-------------RVR-------KGFKKKSEANRPRPETRTGCPAMIKF 107
                   G G             R R        GFKKKSEANRPRPETRTGCPAMIKF
Sbjct: 61  YSCYAKEQGFGVRVSNTWYRKSKERYRGKLSCSSAGFKKKSEANRPRPETRTGCPAMIKF 120

[Close]

BLAST of CmoCh01G001670 vs. NCBI nr
Match: XP_023523301.1 (protein FAR1-RELATED SEQUENCE 6-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023523302.1 protein FAR1-RELATED SEQUENCE 6-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 79.7 bits (195), Expect = 2.2e-11
Identity = 39/40 (97.50%), Postives = 40/40 (100.00%), Query Frame = 0


Query: 105 FRSIVQVIEEGRKSKERYDIAIQGINDILSKLRLGTNPSS 145
           +RSIVQVIEEGRKSKERYDIAIQGINDILSKLRLGTNPSS
Sbjct: 629 YRSIVQVIEEGRKSKERYDIAIQGINDILSKLRLGTNPSS 668

HSP 2 Score: 100.1 bits (248), Expect = 1.6e-17
Identity = 65/121 (53.72%), Postives = 68/121 (56.20%), Query Frame = 0


Query: 24  MDGVSLNTDPVGDEEADYFEIEGDSVLADYVDQTVAMQKNR----------DSESELVTL 83
           MDGV LNTDPVGDEEADYFEIEGDSVLADYVDQT   Q             +S  ++   
Sbjct: 1   MDGVYLNTDPVGDEEADYFEIEGDSVLADYVDQTGMFQGENPLPPAVGMEFESYEDVYYF 60

Query: 84  --------GIG-------------RVR-------KGFKKKSEANRPRPETRTGCPAMIKF 107
                   G G             R R        GFKKKSEANRPRPETRTGCPAMIKF
Sbjct: 61  YSCYAKEQGFGVRVSNTWYRKSKERYRGKLSCSSAGFKKKSEANRPRPETRTGCPAMIKF 120

[Close]

BLAST of CmoCh01G001670 vs. TAIR 10
Match: AT1G52520.1 (FAR1-related sequence 6 )

HSP 1 Score: 42.0 bits (97), Expect = 4.8e-04
Identity = 17/29 (58.62%), Postives = 23/29 (79.31%), Query Frame = 0


Query: 80  KGFKKKSEANRPRPETRTGCPAMIKFRSI 109
           +GFK+ ++ NR R ETRTGCPAMI+ R +
Sbjct: 136 QGFKRINDVNRVRKETRTGCPAMIRMRQV 164

The following BLAST results are available for this feature:

BLAST of CmoCh01G001670 vs.


Match Name	E-value	Identity	Description

BLAST of CmoCh01G001670 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KFY1	1.6e-18	54.55	Protein FAR1-RELATED SEQUENCE OS=Cucurbita maxima OX=3661 GN=LOC111492869 PE=3 S...	[more]
A0A6J1KFY1	1.2e-10	92.50	Protein FAR1-RELATED SEQUENCE OS=Cucurbita maxima OX=3661 GN=LOC111492869 PE=3 S...	[more]
A0A6J1G944	1.1e-11	97.50	Protein FAR1-RELATED SEQUENCE OS=Cucurbita moschata OX=3662 GN=LOC111452090 PE=3...	[more]
A0A0A0KVM3	3.3e-08	82.50	Protein FAR1-RELATED SEQUENCE OS=Cucumis sativus OX=3659 GN=Csa_4G006410 PE=3 SV...	[more]
A0A6J1DHG7	1.2e-10	90.00	uncharacterized protein LOC111020950 OS=Momordica charantia OX=3673 GN=LOC111020...	[more]

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BLAST of CmoCh01G001670 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7036521.1	1.4e-29	61.11	Protein FAR1-RELATED SEQUENCE 6, partial [Cucurbita argyrosperma subsp. argyrosp...	[more]
KAG7036521.1	2.2e-11	97.50	Protein FAR1-RELATED SEQUENCE 6, partial [Cucurbita argyrosperma subsp. argyrosp...	[more]
XP_022948397.1	2.2e-11	97.50	protein FAR1-RELATED SEQUENCE 6-like isoform X1 [Cucurbita moschata]	[more]
XP_022998133.1	2.5e-10	92.50	protein FAR1-RELATED SEQUENCE 6-like isoform X1 [Cucurbita maxima]	[more]
XP_023523301.1	2.2e-11	97.50	protein FAR1-RELATED SEQUENCE 6-like isoform X1 [Cucurbita pepo subsp. pepo] >XP...	[more]

Pages

BLAST of CmoCh01G001670 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G52520.1	4.8e-04	58.62	FAR1-related sequence 6	[more]

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh01G001670.1	CmoCh01G001670.1	mRNA