CmoCh01G001650 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh01G001650
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Signal recognition particle 54 kDa protein
Location	Cmo_Chr01: 711595 .. 716266 (+)
RNA-Seq Expression	CmoCh01G001650
Synteny	CmoCh01G001650

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ACTTTCCATTTTTACCACTCCGAATCGGACTCTGAAAGGCGGAGAAGGACGTCGTAAATTCTCTGAAACCCTCAAATCGGAACCCTGCTCCAAAAGCTCGCTCAATCAATCAAAAACTCGAATTCAGATTTCGAACAATCGGCCAAGATGGTTTTAGCACAGCTTGGAGGGAGCATCTCCCGTGCCCTCCAGCAGATGAGCAATGCGACGGTCATCGACGAGAAGGTTTTGAACGAATGTCTCAACGAGATCACCCGCGCTCTTCTTCAATCCGATGTCCAATTCAAGCTTGTCCGTGACATGCAGACCAATATCAAGAAAATTGTCAATCTGGATGACCTCGCCGCCGGTCATAATAAGCGCAAGATCATTCAACAAGTATGTGTCGTTTTTATTTTCCATCTTCTCGTCATGGCCAATGATTTTTTTTGTTTTGTTTTTATGATTTAGCGTTTTATGAAATTAAAGTTGATCGCAAGAGTTGTAGCTGAATTTAAGACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCTGTTGCTGCTGCTGTATCTTAGTGCTCAATGACTTTCGAAATTGTCCATATATTTGATTATGTACTACGAGAATCAATGGGAAACGAAAAATCTTTCTGAGGGCACTTAATTTTAGCTGTTTCTATGTTTCGAAGTTTATAAATATGACATGTTTTAGGATTTGTGTACTTTAACGTTGCTATAGCAATTTTTGTTCGGCTTTCCAAATTTTCAAAGTATGCTGTTGTAGAGAGATAACTGGGTGGGTTAGTACTTCCGTGGGCATCATTGTTCTGTGGGATTCTTGTTTTGGAAAGAGAGGGTTAACCTCAAGAGTGTGACCTTATGATTAAAGAGGAAACTAGTTGGAGGTAGTAAAAGAAAAACTGAAATGGACAAAGAAGGTGATTGCAACACTCCCTAACCCTTTTGTACAGAGTAACTGATGTTTGTAGCTAACCAAGGTTAATTTCCAACGGTCAGCATTTGAAGATGATATATCCTTCATCATTTTTACGACTACTTTTGATAATAAAACCATGCTGAACAACTTTACTCGTTTTGTTGGTCTCTTCACTCACCTATTTTAAAAATTACCTATTGTATACTCTTCATTGGTAAGCTGCATTTTAAGAGGTTTTCTTTTCTCCTTATGTAGGCTGTATTTAATGAATTGTGCAAAATGCTTGATCCTGGGAAGCCATCTTTTACGCCAAAGAAAGGAAAAACTAGTGTTATCATGTTTGTTGGTTTGCAAGGTATGTCGGCTGTAAGATTGTTTTCTTCAGTATTCATTTATTGATCCACTTAAATGTGGCGTTTGGACATTCAGACTGATGTGGGTTAGTTGCTGTTATCATCATTCGTCACTATTTGAGTTTGACGAGATGAAATCTAAAGCTACCATCTGGGAGCTGTTTTATTCACGATGTAGCAGCATCTGAAAGATTTGTAGTTATATGTTTGTTTAGAAAAAGGATTTCTCTTATAATTCATTCTTGTTGAACTATATTTGTTTGATTCGTGAAATCCATAGTTTTCTTTTTACCATTTTTCACTTTTTTCTACATGTAATTGGTTACTCTATACTTCTTTAAATTTTCTAAAATACAGGGTCTGGGAAGACCACAACATGTACGAAGTATGCATATTATCATCAGAAGAAAGGCTGGAAGCCTGCCTTGGTGTGTGCAGATACATTCAGAGCTGGTGCATTTGATCAATTGAAGCAGAATGCAACCAAAGCAAAGATTCCCTTTTATGGAAGGTATGGTACCTATATATTATTGAATTGACTCGTCTGTGCATTTCTATGATTATGGAAGCACGGTTTTACGAAAAGAATAGTACTATATGTGAGGGGGTGGTTTTACCAAATTAATAACTTAGTGTGTTATCCTCTTTAGAACTACTTTCTTGCTAAGATCAAACTACTTTCTTGCATGTATTGATCATTGTGTTTGATAGTATTCGACATCTTTGCTTTCTTTCTTCTAGCGTTTTTGTAATTTGGTTGGTATTGGTGGCGGGTGAGGTATGGAAGGAGATATGTTTAGAGTTTATGGTTCCAGGTATATCCTGGAACATAAATATGTATATACATGTGTGTGTGTGTGTGTTCGCTCTCTCTCTTTTTTTTTTTTTTTTTTTCCCCTTTTCCTTTTAGTTTTTACTTTTATAGTTGAAGTTTTCTTTGTTTCTGGAGTGTGCTCGATTTATTCATCAAGATGTCATTCAGTATATCCATTATTCTTTGTTTCCCTATTTTGTAGTTACATGGAATCAGATCCTGTAAAAATTGCGGAGGAAGGTGTGGAGAGATTCAAGAAAGAAAATTGTGATCTCATAATTGTTGATACCAGTGGGCGTCACAAACAAGAAGCTGCTCTTTTTGAAGAAATGCGGCAAGTTTCTGAAGCAACGGTAATTTTCTTGTACTTATTCTTTTGTTGGCCATTTGATTATCTTGTTGAAATTCCTGACTGTTCTTTGCCTTGTCCAGAAACCAGATCTTGTTATATTTGTTATGGATAGCAGTATTGGTCAGGCAGCATTTGACCAAGCTCAAGCATTCAAACAAAGTGTTGCAGTTGGTGCTGTGATTGTGACTAAAATGGATGGTCACGCAAAGGGAGGTGGTGCTCTTAGTGCGTAAGTTTTCAAAGCTCTGTTTATTCCTGCTTTTTTTGGGATGAAAAACCATAGTGAAAGTTGGAAACTCCATGCCGATTGTTTTGGAAAGCTTTATTTTTCTTGGTAGTCTTTGAGCCTTATGGAACATATCTGTAGATATTCATTGGATTTATTGTTTGATCAAGTGCTTGGTCACGTTAAATAGCTTAGTCCAATTGACGCTAGGAGGATATTGTGTCAAAATCTGTTACACACTTGCAGTTCTCTTTTTTCTGGGATTCATTGCATCCTATGAAAGATGTATAGATGAATGGTGAATCATTGAGCTAAATCTCTTTGTTTTCTACGTATGGTTGCAGTGTTGCAGCAACAAAGAGTCCTGTCATTTTCATTGGAATTGGAGAACACATGGATGAGTTTGAAGTTTTTGATGTTAAACCATTTGTCAGCCGTCTCCTAGGTGCTTTGTCTATTGAATCTGAACTTGTTGGCTTCAGTTATTGCATGTTTTCTGTCATTACCTGATTGTTTTATTTCTTTAGGCATGGGAGACTGGTCTGGATTCATGGATAAAATTCATGAAGTCGTGCCAATGGATCAGCAACCAGAGCTTTTGCAAAAGCTTTCAGAAGGAAATTTTACTTTGAGAATTATGTACGAGCAGTTTCAGAACTTGCTTAAGATGGGTCCAATTAGCCAGGTATTATTCTGACATGATATAATATACCATTTATCTTATTATTTGCTTCTCCCATACATTTGGAAAAAAAAAAAGTAGGTTAACCTTTTGAAGTTCTGAGGGAGATTTGTGAGTAGTAGTGTCACTTAGTGGTTCATCATAGTAAAAACTGTTCCTCAGGTTCTAAACTTTCCACTACTAAGGTTAATGATATCGACATAAATCTTGGAAATACGGCCTGTTTCTTGCAATAGATACTTTATAGAGGAACGCAGAGTTGCATTGTAACATCGGTTAAGCAAGTTTAGAATATGTTTTGCTTCACATTTTTATTCACAGATCTGCAACTGTCCTAGCAAATACAAGTTCTTTCTAGCCAATTTCGTGTTATAAATAATTGAGATAATGTGTGTTTACATGGAATTTGAACCTCTGCTCTAAATACTTGCTATACGCTGATTGGGTGGTCAAGTTTTTAATTCTTTGATTGCAGTCTTTCTTTACATCAATGACTTCTTGAAACGCATTATTCTAAGAAATGGTCTGTTTAGGTATTTTCAATGCTTCCTGGATTTAGTGCTGAATTGATGCCAAAAGGGCGTGAAAAGGAAAGCCAAGCGAAACTAAAACGCTACATGACTATGATGGACTCAATGACGGATGAAGGAAAGCAAAAACTATCCATATGCTCTGCCTATCTTTTTCTTGCTACCTCGGTGTGTATTGAATTTGATGATTGTGAGACTGATACATGGATTTATTATTTTAACAGAATTGGATAGCTCAAACCCGAAGCTCATGAACGAGTCAAGAATGATGCGAGTAGCACGAGGTTCAGGTCGCCGCATTCAGGAAGTAATGGAAATGATGGAAGAGTACAAACGCCTCGCCAAGGTATGGAGCAAGATGAAAGGGCTGAAGATCCCAAAGAAGGGCGAAATGAGCGCTCTATCTCGAAACATGAATGCACAGCACATGAGTAAGGTCCTTCCTCCCCAGATTTTGAAGCAAATTGGCGGGATGGGTGGCTTACAGAGCTTGATGAAGCAAATGGGTTCCAACAAAGATATGATGGGGATGTTTGGAGGTGGAGACAAGTAG

mRNA sequence

ACTTTCCATTTTTACCACTCCGAATCGGACTCTGAAAGGCGGAGAAGGACGTCGTAAATTCTCTGAAACCCTCAAATCGGAACCCTGCTCCAAAAGCTCGCTCAATCAATCAAAAACTCGAATTCAGATTTCGAACAATCGGCCAAGATGGTTTTAGCACAGCTTGGAGGGAGCATCTCCCGTGCCCTCCAGCAGATGAGCAATGCGACGGTCATCGACGAGAAGGTTTTGAACGAATGTCTCAACGAGATCACCCGCGCTCTTCTTCAATCCGATGTCCAATTCAAGCTTGTCCGTGACATGCAGACCAATATCAAGAAAATTGTCAATCTGGATGACCTCGCCGCCGGTCATAATAAGCGCAAGATCATTCAACAAGCTGTATTTAATGAATTGTGCAAAATGCTTGATCCTGGGAAGCCATCTTTTACGCCAAAGAAAGGAAAAACTAGTGTTATCATGTTTGTTGGTTTGCAAGGGTCTGGGAAGACCACAACATGTACGAAGTATGCATATTATCATCAGAAGAAAGGCTGGAAGCCTGCCTTGGTGTGTGCAGATACATTCAGAGCTGGTGCATTTGATCAATTGAAGCAGAATGCAACCAAAGCAAAGATTCCCTTTTATGGAAGTTACATGGAATCAGATCCTGTAAAAATTGCGGAGGAAGGTGTGGAGAGATTCAAGAAAGAAAATTGTGATCTCATAATTGTTGATACCAGTGGGCGTCACAAACAAGAAGCTGCTCTTTTTGAAGAAATGCGGCAAGTTTCTGAAGCAACGAAACCAGATCTTGTTATATTTGTTATGGATAGCAGTATTGGTCAGGCAGCATTTGACCAAGCTCAAGCATTCAAACAAAGTGTTGCAGTTGGTGCTGTGATTGTGACTAAAATGGATGGTCACGCAAAGGGAGGTGGTGCTCTTAGTGCTGTTGCAGCAACAAAGAGTCCTGTCATTTTCATTGGAATTGGAGAACACATGGATGAGTTTGAAGTTTTTGATGTTAAACCATTTGTCAGCCGTCTCCTAGGCATGGGAGACTGGTCTGGATTCATGGATAAAATTCATGAAGTCGTGCCAATGGATCAGCAACCAGAGCTTTTGCAAAAGCTTTCAGAAGGAAATTTTACTTTGAGAATTATGTACGAGCAGTTTCAGAACTTGCTTAAGATGGGTCCAATTAGCCAGGTATTTTCAATGCTTCCTGGATTTAGTGCTGAATTGATGCCAAAAGGGCGTGAAAAGGAAAGCCAAGCGAAACTAAAACGCTACATGACTATGATGGACTCAATGACGGATGAAGGAAAGCAAAAACTATCCATATGCTCTGCCTATCTTTTTCTTGCTACCTCGGTCTCAAACCCGAAGCTCATGAACGAGTCAAGAATGATGCGAGTAGCACGAGGTTCAGGTCGCCGCATTCAGGAAGTAATGGAAATGATGGAAGAGTACAAACGCCTCGCCAAGGTATGGAGCAAGATGAAAGGGCTGAAGATCCCAAAGAAGGGCGAAATGAGCGCTCTATCTCGAAACATGAATGCACAGCACATGAGTAAGGTCCTTCCTCCCCAGATTTTGAAGCAAATTGGCGGGATGGGTGGCTTACAGAGCTTGATGAAGCAAATGGGTTCCAACAAAGATATGATGGGGATGTTTGGAGGTGGAGACAAGTAG

Coding sequence (CDS)

ATGGTTTTAGCACAGCTTGGAGGGAGCATCTCCCGTGCCCTCCAGCAGATGAGCAATGCGACGGTCATCGACGAGAAGGTTTTGAACGAATGTCTCAACGAGATCACCCGCGCTCTTCTTCAATCCGATGTCCAATTCAAGCTTGTCCGTGACATGCAGACCAATATCAAGAAAATTGTCAATCTGGATGACCTCGCCGCCGGTCATAATAAGCGCAAGATCATTCAACAAGCTGTATTTAATGAATTGTGCAAAATGCTTGATCCTGGGAAGCCATCTTTTACGCCAAAGAAAGGAAAAACTAGTGTTATCATGTTTGTTGGTTTGCAAGGGTCTGGGAAGACCACAACATGTACGAAGTATGCATATTATCATCAGAAGAAAGGCTGGAAGCCTGCCTTGGTGTGTGCAGATACATTCAGAGCTGGTGCATTTGATCAATTGAAGCAGAATGCAACCAAAGCAAAGATTCCCTTTTATGGAAGTTACATGGAATCAGATCCTGTAAAAATTGCGGAGGAAGGTGTGGAGAGATTCAAGAAAGAAAATTGTGATCTCATAATTGTTGATACCAGTGGGCGTCACAAACAAGAAGCTGCTCTTTTTGAAGAAATGCGGCAAGTTTCTGAAGCAACGAAACCAGATCTTGTTATATTTGTTATGGATAGCAGTATTGGTCAGGCAGCATTTGACCAAGCTCAAGCATTCAAACAAAGTGTTGCAGTTGGTGCTGTGATTGTGACTAAAATGGATGGTCACGCAAAGGGAGGTGGTGCTCTTAGTGCTGTTGCAGCAACAAAGAGTCCTGTCATTTTCATTGGAATTGGAGAACACATGGATGAGTTTGAAGTTTTTGATGTTAAACCATTTGTCAGCCGTCTCCTAGGCATGGGAGACTGGTCTGGATTCATGGATAAAATTCATGAAGTCGTGCCAATGGATCAGCAACCAGAGCTTTTGCAAAAGCTTTCAGAAGGAAATTTTACTTTGAGAATTATGTACGAGCAGTTTCAGAACTTGCTTAAGATGGGTCCAATTAGCCAGGTATTTTCAATGCTTCCTGGATTTAGTGCTGAATTGATGCCAAAAGGGCGTGAAAAGGAAAGCCAAGCGAAACTAAAACGCTACATGACTATGATGGACTCAATGACGGATGAAGGAAAGCAAAAACTATCCATATGCTCTGCCTATCTTTTTCTTGCTACCTCGGTCTCAAACCCGAAGCTCATGAACGAGTCAAGAATGATGCGAGTAGCACGAGGTTCAGGTCGCCGCATTCAGGAAGTAATGGAAATGATGGAAGAGTACAAACGCCTCGCCAAGGTATGGAGCAAGATGAAAGGGCTGAAGATCCCAAAGAAGGGCGAAATGAGCGCTCTATCTCGAAACATGAATGCACAGCACATGAGTAAGGTCCTTCCTCCCCAGATTTTGAAGCAAATTGGCGGGATGGGTGGCTTACAGAGCTTGATGAAGCAAATGGGTTCCAACAAAGATATGATGGGGATGTTTGGAGGTGGAGACAAGTAG

Protein sequence

MVLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIVNLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFTPKKGKTSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAEEGVERFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSVAVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGIGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNLLKMGPISQVFSMLPGFSAELMPKGREKESQAKLKRYMTMMDSMTDEGKQKLSICSAYLFLATSVSNPKLMNESRMMRVARGSGRRIQEVMEMMEEYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQILKQIGGMGGLQSLMKQMGSNKDMMGMFGGGDK

Homology

[Close]

BLAST of CmoCh01G001650 vs. ExPASy Swiss-Prot
Match: P49972 (Signal recognition particle 54 kDa protein 2 OS=Solanum lycopersicum OX=4081 PE=2 SV=1)

HSP 1 Score: 892.9 bits (2306), Expect = 1.7e-258
Identity = 458/513 (89.28%), Postives = 480/513 (93.57%), Query Frame = 0


Query: 1   MVLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV 60
           MVLA+LGGSISRALQQMSNAT+IDEKVLNECLNEITRALLQ+DVQFKLVRDM TNIKKIV
Sbjct: 1   MVLAELGGSISRALQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVRDMTTNIKKIV 60

Query: 61  NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFTPKKGKTSVIMFVGLQGSGKTTTCTK 120
           NLDDLAAGHNKR+IIQQAVFNELCK+LDPGKPSFTPKKGK S++MFVGLQGSGKTTTCTK
Sbjct: 61  NLDDLAAGHNKRRIIQQAVFNELCKILDPGKPSFTPKKGKPSIVMFVGLQGSGKTTTCTK 120

Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAEEGVERFK 180
           YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSY ESDPVKIA +GVE FK
Sbjct: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVKIAVDGVETFK 180

Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
           KENCDLIIVDTSGRHKQEAALFEEMRQV+EATKPDLVIFVMDSSIGQAAFDQAQAFKQSV
Sbjct: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVAEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240

Query: 241 AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGIGEHMDEFEVFDVKPFVSRLLGMGDW 300
           AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIG GEHMDEFEVFDVKPFVSRLLGMGDW
Sbjct: 241 AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300

Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNLLKMGPISQVFSMLPGFSAEL 360
           SGFMDKIHEVVPMDQQPELLQKLSEG+FTLRIMYEQFQN+LKMGPI QVFSMLPGFSAEL
Sbjct: 301 SGFMDKIHEVVPMDQQPELLQKLSEGHFTLRIMYEQFQNILKMGPIGQVFSMLPGFSAEL 360

Query: 361 MPKGREKESQAKLKRYMTMMDSMTDEGKQKLSICSAYLFLATSVSNPKLMNESRMMRVAR 420
           MPKGRE ESQAK+KRYMTMMDSMT+E                  SNPKLM +SR+MR+AR
Sbjct: 361 MPKGRENESQAKIKRYMTMMDSMTNE--------------ELDSSNPKLMTDSRIMRIAR 420

Query: 421 GSGRRIQEVMEMMEEYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQILKQ 480
           GSGR++ EVM+MMEEYKRLAK+WSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQ+LKQ
Sbjct: 421 GSGRQVHEVMDMMEEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQMLKQ 480

Query: 481 IGGMGGLQSLMKQMGSNKDMM----GMFGGGDK 510
           IGGMGGLQ+LMKQMGS KDMM    GMFGGGDK
Sbjct: 481 IGGMGGLQNLMKQMGSAKDMMGGMGGMFGGGDK 499

[Close]

BLAST of CmoCh01G001650 vs. ExPASy Swiss-Prot
Match: P49967 (Signal recognition particle 54 kDa protein 3 OS=Arabidopsis thaliana OX=3702 GN=SRP-54C PE=2 SV=2)

HSP 1 Score: 856.3 bits (2211), Expect = 1.8e-247
Identity = 429/509 (84.28%), Postives = 470/509 (92.34%), Query Frame = 0


Query: 1   MVLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV 60
           MVLA+LGG I+RA+QQMSN T+IDEK LNECLNEITRALLQSDV F LV++MQ+NIKKIV
Sbjct: 1   MVLAELGGRITRAIQQMSNVTIIDEKALNECLNEITRALLQSDVSFPLVKEMQSNIKKIV 60

Query: 61  NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFTPKKGKTSVIMFVGLQGSGKTTTCTK 120
           NL+DLAAGHNKR+II+QA+F+ELCKMLDPGKP+F PKK K SV+MFVGLQG+GKTTTCTK
Sbjct: 61  NLEDLAAGHNKRRIIEQAIFSELCKMLDPGKPAFAPKKAKASVVMFVGLQGAGKTTTCTK 120

Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAEEGVERFK 180
           YAYYHQKKG+KPALVCADTFRAGAFDQLKQNATKAKIPFYGSY ESDPVKIA EGV+ FK
Sbjct: 121 YAYYHQKKGYKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVKIAVEGVDTFK 180

Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
           KENCDLIIVDTSGRHKQEA+LFEEMRQV+EATKPDLVIFVMDSSIGQAAFDQAQAFKQSV
Sbjct: 181 KENCDLIIVDTSGRHKQEASLFEEMRQVAEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240

Query: 241 AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGIGEHMDEFEVFDVKPFVSRLLGMGDW 300
           AVGAVI+TKMDGHAKGGGALSAVAATKSPVIFIG GEHMDEFEVFDVKPFVSRLLGMGDW
Sbjct: 241 AVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300

Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNLLKMGPISQVFSMLPGFSAEL 360
           SGF+DK+ EVVP DQQPELL+KLS+GNFTLRIMY+QFQN+L MGP+ +VFSMLPG SAE+
Sbjct: 301 SGFVDKLQEVVPKDQQPELLEKLSQGNFTLRIMYDQFQNILNMGPLKEVFSMLPGISAEM 360

Query: 361 MPKGREKESQAKLKRYMTMMDSMTDEGKQKLSICSAYLFLATSVSNPKLMNESRMMRVAR 420
           MPKG EKESQAK+KRYMTMMDSMT++                  SNPK+ NESRMMR+AR
Sbjct: 361 MPKGHEKESQAKIKRYMTMMDSMTND--------------ELDSSNPKVFNESRMMRIAR 420

Query: 421 GSGRRIQEVMEMMEEYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQILKQ 480
           GSGR+++EVMEM+EEYKRLAK+WSKMKGLKIPK G+MSALSRNMNAQHMSKVLPPQ+LKQ
Sbjct: 421 GSGRQVREVMEMLEEYKRLAKIWSKMKGLKIPKNGDMSALSRNMNAQHMSKVLPPQMLKQ 480

Query: 481 IGGMGGLQSLMKQMGSNKDMMGMFGGGDK 510
           IGGMGGLQSLMKQMGS KDMMGMFGGGDK
Sbjct: 481 IGGMGGLQSLMKQMGSGKDMMGMFGGGDK 495

[Close]

BLAST of CmoCh01G001650 vs. ExPASy Swiss-Prot
Match: P49971 (Signal recognition particle 54 kDa protein 1 OS=Solanum lycopersicum OX=4081 PE=3 SV=1)

HSP 1 Score: 841.3 bits (2172), Expect = 5.9e-243
Identity = 435/508 (85.63%), Postives = 470/508 (92.52%), Query Frame = 0


Query: 1   MVLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV 60
           MVLAQLGGSISRALQQMSNAT+IDEKVLNECLNEITRALLQ+DVQFKLVRDM TNIKKIV
Sbjct: 1   MVLAQLGGSISRALQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVRDMSTNIKKIV 60

Query: 61  NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFTPKKGKTSVIMFVGLQGSGKTTTCTK 120
           NL+DLAAGHNKR+IIQQAV+NELCK+LDPGKP+FT KKGK SV+MFVGLQGSGKTTTCTK
Sbjct: 61  NLEDLAAGHNKRRIIQQAVYNELCKILDPGKPAFTLKKGKPSVVMFVGLQGSGKTTTCTK 120

Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYG-SYMESDPVKIAEEGVERF 180
           YAY+HQK+GWKPALVCADTFRAGAFDQLKQNATKAKIPFYG SY ESDPVKIA +GVE F
Sbjct: 121 YAYHHQKRGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSSYTESDPVKIAVDGVETF 180

Query: 181 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQS 240
           KKENCDLIIVDTSGRHKQEAALFEEMRQVSEA KPDLVIFVMDSSIGQAAFDQAQAF+QS
Sbjct: 181 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEAQKPDLVIFVMDSSIGQAAFDQAQAFRQS 240

Query: 241 VAVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGIGEHMDEFEVFDVKPFVSRLLGMGD 300
           VAVGAVIVTKMDGHAKGGGALS VAATKSPVIFIG GEHMDEFEVFDVKPFVSRLLGMGD
Sbjct: 241 VAVGAVIVTKMDGHAKGGGALSRVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300

Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNLLKMGPISQVFSMLPGFSAE 360
            SG ++KI +VVPMDQQPELLQKLSEG+FTLRIMYEQFQ++LKMGP+  VFSMLPGFSAE
Sbjct: 301 LSGLVNKIQDVVPMDQQPELLQKLSEGHFTLRIMYEQFQSMLKMGPLG-VFSMLPGFSAE 360

Query: 361 LMPKGREKESQAKLKRYMTMMDSMTDEGKQKLSICSAYLFLATSVSNPKLMNESRMMRVA 420
           +MP+GREKESQAK KRYMTMMDSMTDE                  +NPK++ ESR+MR+A
Sbjct: 361 MMPQGREKESQAKFKRYMTMMDSMTDE--------------ELDSTNPKILTESRIMRIA 420

Query: 421 RGSGRRIQEVMEMMEEYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQILK 480
           RGSGR + EVMEM+EEYKRLAK++SKMKGLKIPKKG+MS+LSRNMNAQ+MSKVLPPQ+LK
Sbjct: 421 RGSGRLVHEVMEMLEEYKRLAKIFSKMKGLKIPKKGDMSSLSRNMNAQNMSKVLPPQMLK 480

Query: 481 QIGGMGGLQSLMKQMGSNKDMMGMFGGG 508
           QIGGMGGLQ+LMKQMGS KDMMGMFGGG
Sbjct: 481 QIGGMGGLQNLMKQMGSAKDMMGMFGGG 493

[Close]

BLAST of CmoCh01G001650 vs. ExPASy Swiss-Prot
Match: P49969 (Signal recognition particle 54 kDa protein 2 OS=Hordeum vulgare OX=4513 GN=SRP54-2 PE=2 SV=1)

HSP 1 Score: 798.9 bits (2062), Expect = 3.4e-230
Identity = 410/506 (81.03%), Postives = 456/506 (90.12%), Query Frame = 0


Query: 1   MVLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV 60
           MVLAQLGGSISRAL QMSNATVIDEKVL ECLNEI+RALLQSDVQFK+VRDMQTNI+KIV
Sbjct: 1   MVLAQLGGSISRALAQMSNATVIDEKVLGECLNEISRALLQSDVQFKMVRDMQTNIRKIV 60

Query: 61  NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFTPKKGKTSVIMFVGLQGSGKTTTCTK 120
           NL+ LAAG NKR+IIQQAVF ELC MLDPGKP+FTPKKGK SV+MFVGLQGSGKTTTCTK
Sbjct: 61  NLETLAAGTNKRRIIQQAVFTELCNMLDPGKPAFTPKKGKPSVVMFVGLQGSGKTTTCTK 120

Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAEEGVERFK 180
           YAYYHQ+KG+KP+LVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIA EG+ERF+
Sbjct: 121 YAYYHQRKGFKPSLVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGLERFR 180

Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
           KEN DLII+DTSGRHKQEAALFEEMRQV+EATKPDLVIFVMD SIGQAAFDQAQAFKQS 
Sbjct: 181 KENSDLIIIDTSGRHKQEAALFEEMRQVAEATKPDLVIFVMDGSIGQAAFDQAQAFKQSA 240

Query: 241 AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGIGEHMDEFEVFDVKPFVSRLLGMGDW 300
           +VGAVI+TK+DGHAKGGGALSAVAATKSPVIFIG GEH+DEFE+FDVKPFVSRLLGMGD 
Sbjct: 241 SVGAVIITKLDGHAKGGGALSAVAATKSPVIFIGTGEHIDEFEIFDVKPFVSRLLGMGDL 300

Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNLLKMGPISQVFSMLPGFSAEL 360
           SG MDKI +V+P DQQPELL KL+EG FTLR++YEQFQNLLKMGPI QVFSMLPGFS+EL
Sbjct: 301 SGLMDKIQDVMPADQQPELLAKLAEGTFTLRLLYEQFQNLLKMGPIGQVFSMLPGFSSEL 360

Query: 361 MPKGREKESQAKLKRYMTMMDSMTDEGKQKLSICSAYLFLATSVSNPKLMNESRMMRVAR 420
           MPKG EKE QAK+KRYMT+MDSMT          +A L      +NPKLM ESR++R+AR
Sbjct: 361 MPKGHEKEGQAKIKRYMTIMDSMT----------AAEL----DSTNPKLMTESRIIRIAR 420

Query: 421 GSGRRIQEVMEMMEEYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQILKQ 480
           GSGR+I++V +M+EEYKRLAK+WSKMKGLK+PK G+MS LS+N+N Q M+K LPPQ+LKQ
Sbjct: 421 GSGRQIRDVTDMLEEYKRLAKMWSKMKGLKMPKNGKMSDLSQNLNIQQMTKALPPQVLKQ 480

Query: 481 IGGMGGLQSLMKQMGSNKDMMGMFGG 507
           +GGMGGLQ+LMKQMG  KDM  M GG
Sbjct: 481 MGGMGGLQALMKQMG-GKDMSKMLGG 491

[Close]

BLAST of CmoCh01G001650 vs. ExPASy Swiss-Prot
Match: P49968 (Signal recognition particle 54 kDa protein 1 OS=Hordeum vulgare OX=4513 GN=SRP54-1 PE=2 SV=1)

HSP 1 Score: 795.8 bits (2054), Expect = 2.8e-229
Identity = 409/506 (80.83%), Postives = 455/506 (89.92%), Query Frame = 0


Query: 1   MVLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV 60
           MVLAQLGGSISRAL QMSNATVIDEKVL ECLNEI+RALLQSDVQFK+VRDMQTNI+KIV
Sbjct: 1   MVLAQLGGSISRALAQMSNATVIDEKVLGECLNEISRALLQSDVQFKMVRDMQTNIRKIV 60

Query: 61  NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFTPKKGKTSVIMFVGLQGSGKTTTCTK 120
           NL+ LAAG NKR+IIQQAVF ELC MLDPGKP+FT KKGK SV+MFVGLQGSGKTTTCTK
Sbjct: 61  NLETLAAGTNKRRIIQQAVFTELCNMLDPGKPAFTTKKGKPSVVMFVGLQGSGKTTTCTK 120

Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAEEGVERFK 180
           YAYYHQ+KG+KP+LVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIA EG+ERF+
Sbjct: 121 YAYYHQRKGFKPSLVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGLERFR 180

Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
           KEN DLII+DTSGRHKQEAALFEEMRQV+EATKPDLVIFVMD SIGQAAFDQAQAFKQS 
Sbjct: 181 KENSDLIIIDTSGRHKQEAALFEEMRQVAEATKPDLVIFVMDGSIGQAAFDQAQAFKQSA 240

Query: 241 AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGIGEHMDEFEVFDVKPFVSRLLGMGDW 300
           +VGAVI+TK+DGHAKGGGALSAVAATKSPVIFIG GEH+DEFE+FDVKPFVSRLLGMGD 
Sbjct: 241 SVGAVIITKLDGHAKGGGALSAVAATKSPVIFIGTGEHIDEFEIFDVKPFVSRLLGMGDL 300

Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNLLKMGPISQVFSMLPGFSAEL 360
           SG MDKI +V+P DQQPELL KL+EG FTLR++YEQFQNLLKMGPI QVFSMLPGFS+EL
Sbjct: 301 SGLMDKIQDVMPADQQPELLAKLAEGTFTLRLLYEQFQNLLKMGPIGQVFSMLPGFSSEL 360

Query: 361 MPKGREKESQAKLKRYMTMMDSMTDEGKQKLSICSAYLFLATSVSNPKLMNESRMMRVAR 420
           MPKG EKE QAK+KRYMT+MDSMT          +A L      +NPKLM ESR++R+AR
Sbjct: 361 MPKGHEKEGQAKIKRYMTIMDSMT----------AAEL----DSTNPKLMTESRIIRIAR 420

Query: 421 GSGRRIQEVMEMMEEYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQILKQ 480
           GSGR+I++V +M+EEYKRLAK+WSKMKGLK+PK G+MS LS+N+N Q M+K LPPQ+LKQ
Sbjct: 421 GSGRQIRDVTDMLEEYKRLAKMWSKMKGLKMPKNGKMSDLSQNLNIQQMTKALPPQVLKQ 480

Query: 481 IGGMGGLQSLMKQMGSNKDMMGMFGG 507
           +GGMGGLQ+LMKQMG  KDM  M GG
Sbjct: 481 MGGMGGLQALMKQMG-GKDMSKMLGG 491

[Close]

BLAST of CmoCh01G001650 vs. ExPASy TrEMBL
Match: A0A6J1G940 (Signal recognition particle 54 kDa protein OS=Cucurbita moschata OX=3662 GN=LOC111452092 PE=3 SV=1)

HSP 1 Score: 946.0 bits (2444), Expect = 6.3e-272
Identity = 491/509 (96.46%), Postives = 491/509 (96.46%), Query Frame = 0


Query: 1   MVLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV 60
           MVLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV
Sbjct: 1   MVLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV 60

Query: 61  NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFTPKKGKTSVIMFVGLQGSGKTTTCTK 120
           NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFTPKKGKTSVIMFVGLQGSGKTTTCTK
Sbjct: 61  NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFTPKKGKTSVIMFVGLQGSGKTTTCTK 120

Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAEEGVERFK 180
           YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAEEGVERFK
Sbjct: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAEEGVERFK 180

Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
           KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV
Sbjct: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240

Query: 241 AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGIGEHMDEFEVFDVKPFVSRLLGMGDW 300
           AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGIGEHMDEFEVFDVKPFVSRLLGMGDW
Sbjct: 241 AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGIGEHMDEFEVFDVKPFVSRLLGMGDW 300

Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNLLKMGPISQVFSMLPGFSAEL 360
           SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNLLKMGPISQVFSMLPGFSAEL
Sbjct: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNLLKMGPISQVFSMLPGFSAEL 360

Query: 361 MPKGREKESQAKLKRYMTMMDSMTDEGKQKLSICSAYLFLATSVSNPKLMNESRMMRVAR 420
           MPKGREKESQAKLKRYMTMMDSMTDE                  SNPKLMNESRMMRVAR
Sbjct: 361 MPKGREKESQAKLKRYMTMMDSMTDE--------------ELDSSNPKLMNESRMMRVAR 420

Query: 421 GSGRRIQEVMEMMEEYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQILKQ 480
           GSGRRIQEVMEMMEEYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQILKQ
Sbjct: 421 GSGRRIQEVMEMMEEYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQILKQ 480

Query: 481 IGGMGGLQSLMKQMGSNKDMMGMFGGGDK 510
           IGGMGGLQSLMKQMGSNKDMMGMFGGGDK
Sbjct: 481 IGGMGGLQSLMKQMGSNKDMMGMFGGGDK 495

[Close]

BLAST of CmoCh01G001650 vs. ExPASy TrEMBL
Match: A0A6J1KE35 (Signal recognition particle 54 kDa protein OS=Cucurbita maxima OX=3661 GN=LOC111493016 PE=3 SV=1)

HSP 1 Score: 943.7 bits (2438), Expect = 3.1e-271
Identity = 489/509 (96.07%), Postives = 490/509 (96.27%), Query Frame = 0


Query: 1   MVLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV 60
           MVLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV
Sbjct: 1   MVLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV 60

Query: 61  NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFTPKKGKTSVIMFVGLQGSGKTTTCTK 120
           NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFTPKKGKTSVIMFVGLQGSGKTTTCTK
Sbjct: 61  NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFTPKKGKTSVIMFVGLQGSGKTTTCTK 120

Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAEEGVERFK 180
           YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAEEGVERFK
Sbjct: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAEEGVERFK 180

Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
           KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV
Sbjct: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240

Query: 241 AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGIGEHMDEFEVFDVKPFVSRLLGMGDW 300
           AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIG GEHMDEFEVFDVKPFVSRLLGMGDW
Sbjct: 241 AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300

Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNLLKMGPISQVFSMLPGFSAEL 360
           SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNLLKMGPISQVFSMLPGFSAEL
Sbjct: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNLLKMGPISQVFSMLPGFSAEL 360

Query: 361 MPKGREKESQAKLKRYMTMMDSMTDEGKQKLSICSAYLFLATSVSNPKLMNESRMMRVAR 420
           MPKGREKESQAKLKRYMTMMDSMTDE                  SNPKLMNESRMMR+AR
Sbjct: 361 MPKGREKESQAKLKRYMTMMDSMTDE--------------ELDSSNPKLMNESRMMRIAR 420

Query: 421 GSGRRIQEVMEMMEEYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQILKQ 480
           GSGRRIQEVMEMMEEYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQILKQ
Sbjct: 421 GSGRRIQEVMEMMEEYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQILKQ 480

Query: 481 IGGMGGLQSLMKQMGSNKDMMGMFGGGDK 510
           IGGMGGLQSLMKQMGSNKDMMGMFGGGDK
Sbjct: 481 IGGMGGLQSLMKQMGSNKDMMGMFGGGDK 495

[Close]

BLAST of CmoCh01G001650 vs. ExPASy TrEMBL
Match: A0A6J1GTY4 (Signal recognition particle 54 kDa protein OS=Cucurbita moschata OX=3662 GN=LOC111457512 PE=3 SV=1)

HSP 1 Score: 938.3 bits (2424), Expect = 1.3e-269
Identity = 485/509 (95.28%), Postives = 488/509 (95.87%), Query Frame = 0


Query: 1   MVLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV 60
           MVLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV
Sbjct: 1   MVLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV 60

Query: 61  NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFTPKKGKTSVIMFVGLQGSGKTTTCTK 120
           NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFTPKKGK SV+MFVGLQGSGKTTTCTK
Sbjct: 61  NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFTPKKGKPSVVMFVGLQGSGKTTTCTK 120

Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAEEGVERFK 180
           YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAEEGVERFK
Sbjct: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAEEGVERFK 180

Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
           KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV
Sbjct: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240

Query: 241 AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGIGEHMDEFEVFDVKPFVSRLLGMGDW 300
           AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIG GEHMDEFEVFDVKPFVSRLLGMGDW
Sbjct: 241 AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300

Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNLLKMGPISQVFSMLPGFSAEL 360
           SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQ LLKMGPISQVFSMLPGFSAEL
Sbjct: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQKLLKMGPISQVFSMLPGFSAEL 360

Query: 361 MPKGREKESQAKLKRYMTMMDSMTDEGKQKLSICSAYLFLATSVSNPKLMNESRMMRVAR 420
           MPKGREKESQAKLKRYMTMMDSMTDE                  SNPKLMNESRMMR+AR
Sbjct: 361 MPKGREKESQAKLKRYMTMMDSMTDE--------------ELDSSNPKLMNESRMMRIAR 420

Query: 421 GSGRRIQEVMEMMEEYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQILKQ 480
           GSGRR+QEVMEMMEEYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQILKQ
Sbjct: 421 GSGRRVQEVMEMMEEYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQILKQ 480

Query: 481 IGGMGGLQSLMKQMGSNKDMMGMFGGGDK 510
           IGGMGGLQSLMKQMGSNKDMMGMFGGGDK
Sbjct: 481 IGGMGGLQSLMKQMGSNKDMMGMFGGGDK 495

[Close]

BLAST of CmoCh01G001650 vs. ExPASy TrEMBL
Match: A0A5A7TRJ6 (Signal recognition particle 54 kDa protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G002130 PE=3 SV=1)

HSP 1 Score: 936.0 bits (2418), Expect = 6.5e-269
Identity = 483/509 (94.89%), Postives = 489/509 (96.07%), Query Frame = 0


Query: 1   MVLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV 60
           MVLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV
Sbjct: 1   MVLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV 60

Query: 61  NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFTPKKGKTSVIMFVGLQGSGKTTTCTK 120
           NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFTPKKGKTSV+MFVGLQGSGKTTTCTK
Sbjct: 61  NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFTPKKGKTSVVMFVGLQGSGKTTTCTK 120

Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAEEGVERFK 180
           YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIA EGVERFK
Sbjct: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFK 180

Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
           KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV
Sbjct: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240

Query: 241 AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGIGEHMDEFEVFDVKPFVSRLLGMGDW 300
           AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIG GEHMDEFEVFDVKPFVSRLLGMGDW
Sbjct: 241 AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300

Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNLLKMGPISQVFSMLPGFSAEL 360
           SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQ+LLKMGPISQVFSMLPG SAEL
Sbjct: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQSLLKMGPISQVFSMLPGVSAEL 360

Query: 361 MPKGREKESQAKLKRYMTMMDSMTDEGKQKLSICSAYLFLATSVSNPKLMNESRMMRVAR 420
           MPKGREKESQAKLKRYMTMMDSMTDEG                 +NPKL+NESRMMR+AR
Sbjct: 361 MPKGREKESQAKLKRYMTMMDSMTDEG----------------YTNPKLINESRMMRIAR 420

Query: 421 GSGRRIQEVMEMMEEYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQILKQ 480
           GSGRR+QEVMEMMEEYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQILKQ
Sbjct: 421 GSGRRVQEVMEMMEEYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQILKQ 480

Query: 481 IGGMGGLQSLMKQMGSNKDMMGMFGGGDK 510
           IGGMGGLQSLMKQMGSNKDMMGMFGGGDK
Sbjct: 481 IGGMGGLQSLMKQMGSNKDMMGMFGGGDK 493

[Close]

BLAST of CmoCh01G001650 vs. ExPASy TrEMBL
Match: A0A1S3BY04 (Signal recognition particle 54 kDa protein OS=Cucumis melo OX=3656 GN=LOC103494661 PE=3 SV=1)

HSP 1 Score: 932.9 bits (2410), Expect = 5.5e-268
Identity = 482/509 (94.70%), Postives = 488/509 (95.87%), Query Frame = 0


Query: 1   MVLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV 60
           MVLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV
Sbjct: 1   MVLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV 60

Query: 61  NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFTPKKGKTSVIMFVGLQGSGKTTTCTK 120
           NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFTPKKGKTSV+MFVGLQGSGKTTTCTK
Sbjct: 61  NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFTPKKGKTSVVMFVGLQGSGKTTTCTK 120

Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAEEGVERFK 180
           YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIA EGVERFK
Sbjct: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFK 180

Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
           KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV
Sbjct: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240

Query: 241 AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGIGEHMDEFEVFDVKPFVSRLLGMGDW 300
           AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIG GEHMDEFEVFDVKPFVSRLLGMGDW
Sbjct: 241 AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300

Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNLLKMGPISQVFSMLPGFSAEL 360
           SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQ+LLKMGPISQVFSMLPG SAEL
Sbjct: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQSLLKMGPISQVFSMLPGVSAEL 360

Query: 361 MPKGREKESQAKLKRYMTMMDSMTDEGKQKLSICSAYLFLATSVSNPKLMNESRMMRVAR 420
           MPKGREKESQAKLKRYMTMMDSMTDE                  +NPKL+NESRMMR+AR
Sbjct: 361 MPKGREKESQAKLKRYMTMMDSMTDE--------------ELDSTNPKLINESRMMRIAR 420

Query: 421 GSGRRIQEVMEMMEEYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQILKQ 480
           GSGRR+QEVMEMMEEYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQILKQ
Sbjct: 421 GSGRRVQEVMEMMEEYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQILKQ 480

Query: 481 IGGMGGLQSLMKQMGSNKDMMGMFGGGDK 510
           IGGMGGLQSLMKQMGSNKDMMGMFGGGDK
Sbjct: 481 IGGMGGLQSLMKQMGSNKDMMGMFGGGDK 495

[Close]

BLAST of CmoCh01G001650 vs. NCBI nr
Match: XP_022948401.1 (signal recognition particle 54 kDa protein 2-like [Cucurbita moschata])

HSP 1 Score: 946.0 bits (2444), Expect = 1.3e-271
Identity = 491/509 (96.46%), Postives = 491/509 (96.46%), Query Frame = 0


Query: 1   MVLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV 60
           MVLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV
Sbjct: 1   MVLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV 60

Query: 61  NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFTPKKGKTSVIMFVGLQGSGKTTTCTK 120
           NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFTPKKGKTSVIMFVGLQGSGKTTTCTK
Sbjct: 61  NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFTPKKGKTSVIMFVGLQGSGKTTTCTK 120

Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAEEGVERFK 180
           YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAEEGVERFK
Sbjct: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAEEGVERFK 180

Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
           KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV
Sbjct: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240

Query: 241 AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGIGEHMDEFEVFDVKPFVSRLLGMGDW 300
           AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGIGEHMDEFEVFDVKPFVSRLLGMGDW
Sbjct: 241 AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGIGEHMDEFEVFDVKPFVSRLLGMGDW 300

Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNLLKMGPISQVFSMLPGFSAEL 360
           SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNLLKMGPISQVFSMLPGFSAEL
Sbjct: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNLLKMGPISQVFSMLPGFSAEL 360

Query: 361 MPKGREKESQAKLKRYMTMMDSMTDEGKQKLSICSAYLFLATSVSNPKLMNESRMMRVAR 420
           MPKGREKESQAKLKRYMTMMDSMTDE                  SNPKLMNESRMMRVAR
Sbjct: 361 MPKGREKESQAKLKRYMTMMDSMTDE--------------ELDSSNPKLMNESRMMRVAR 420

Query: 421 GSGRRIQEVMEMMEEYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQILKQ 480
           GSGRRIQEVMEMMEEYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQILKQ
Sbjct: 421 GSGRRIQEVMEMMEEYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQILKQ 480

Query: 481 IGGMGGLQSLMKQMGSNKDMMGMFGGGDK 510
           IGGMGGLQSLMKQMGSNKDMMGMFGGGDK
Sbjct: 481 IGGMGGLQSLMKQMGSNKDMMGMFGGGDK 495

[Close]

BLAST of CmoCh01G001650 vs. NCBI nr
Match: XP_023523909.1 (signal recognition particle 54 kDa protein 2 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023523910.1 signal recognition particle 54 kDa protein 2 isoform X2 [Cucurbita pepo subsp. pepo] >XP_023523911.1 signal recognition particle 54 kDa protein 2 isoform X3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 944.1 bits (2439), Expect = 4.9e-271
Identity = 490/509 (96.27%), Postives = 490/509 (96.27%), Query Frame = 0


Query: 1   MVLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV 60
           MVLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV
Sbjct: 1   MVLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV 60

Query: 61  NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFTPKKGKTSVIMFVGLQGSGKTTTCTK 120
           NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFTPKKGKTSVIMFVGLQGSGKTTTCTK
Sbjct: 61  NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFTPKKGKTSVIMFVGLQGSGKTTTCTK 120

Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAEEGVERFK 180
           YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAEEGVERFK
Sbjct: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAEEGVERFK 180

Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
           KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV
Sbjct: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240

Query: 241 AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGIGEHMDEFEVFDVKPFVSRLLGMGDW 300
           AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIG GEHMDEFEVFDVKPFVSRLLGMGDW
Sbjct: 241 AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300

Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNLLKMGPISQVFSMLPGFSAEL 360
           SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNLLKMGPISQVFSMLPGFSAEL
Sbjct: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNLLKMGPISQVFSMLPGFSAEL 360

Query: 361 MPKGREKESQAKLKRYMTMMDSMTDEGKQKLSICSAYLFLATSVSNPKLMNESRMMRVAR 420
           MPKGREKESQAKLKRYMTMMDSMTDE                  SNPKLMNESRMMRVAR
Sbjct: 361 MPKGREKESQAKLKRYMTMMDSMTDE--------------ELDSSNPKLMNESRMMRVAR 420

Query: 421 GSGRRIQEVMEMMEEYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQILKQ 480
           GSGRRIQEVMEMMEEYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQILKQ
Sbjct: 421 GSGRRIQEVMEMMEEYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQILKQ 480

Query: 481 IGGMGGLQSLMKQMGSNKDMMGMFGGGDK 510
           IGGMGGLQSLMKQMGSNKDMMGMFGGGDK
Sbjct: 481 IGGMGGLQSLMKQMGSNKDMMGMFGGGDK 495

[Close]

BLAST of CmoCh01G001650 vs. NCBI nr
Match: KAG6606813.1 (hypothetical protein SDJN03_00155, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 943.7 bits (2438), Expect = 6.4e-271
Identity = 490/509 (96.27%), Postives = 491/509 (96.46%), Query Frame = 0


Query: 1   MVLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV 60
           MVLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV
Sbjct: 1   MVLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV 60

Query: 61  NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFTPKKGKTSVIMFVGLQGSGKTTTCTK 120
           NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFTPKKGKTSVIMFVGLQGSGKTTTCTK
Sbjct: 61  NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFTPKKGKTSVIMFVGLQGSGKTTTCTK 120

Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAEEGVERFK 180
           YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAEEGVERFK
Sbjct: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAEEGVERFK 180

Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
           KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV
Sbjct: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240

Query: 241 AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGIGEHMDEFEVFDVKPFVSRLLGMGDW 300
           AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIG GEHMDEFEVFDVKPFVSRLLGMGDW
Sbjct: 241 AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300

Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNLLKMGPISQVFSMLPGFSAEL 360
           SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNLLKMGPISQVFSMLPGFSAEL
Sbjct: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNLLKMGPISQVFSMLPGFSAEL 360

Query: 361 MPKGREKESQAKLKRYMTMMDSMTDEGKQKLSICSAYLFLATSVSNPKLMNESRMMRVAR 420
           MPKGREKESQAKLKRYMTMMDSMTDEGKQKLSICSAYLFLATSVS            +  
Sbjct: 361 MPKGREKESQAKLKRYMTMMDSMTDEGKQKLSICSAYLFLATSVS------------IEF 420

Query: 421 GSGRRIQEVMEMMEEYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQILKQ 480
              RRIQEVMEMMEEYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQILKQ
Sbjct: 421 DDCRRIQEVMEMMEEYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQILKQ 480

Query: 481 IGGMGGLQSLMKQMGSNKDMMGMFGGGDK 510
           IGGMGGLQSLMKQMGSNKDMMGMFGGGDK
Sbjct: 481 IGGMGGLQSLMKQMGSNKDMMGMFGGGDK 497

[Close]

BLAST of CmoCh01G001650 vs. NCBI nr
Match: XP_022998349.1 (signal recognition particle 54 kDa protein 2 [Cucurbita maxima])

HSP 1 Score: 943.7 bits (2438), Expect = 6.4e-271
Identity = 489/509 (96.07%), Postives = 490/509 (96.27%), Query Frame = 0


Query: 1   MVLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV 60
           MVLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV
Sbjct: 1   MVLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV 60

Query: 61  NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFTPKKGKTSVIMFVGLQGSGKTTTCTK 120
           NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFTPKKGKTSVIMFVGLQGSGKTTTCTK
Sbjct: 61  NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFTPKKGKTSVIMFVGLQGSGKTTTCTK 120

Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAEEGVERFK 180
           YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAEEGVERFK
Sbjct: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAEEGVERFK 180

Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
           KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV
Sbjct: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240

Query: 241 AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGIGEHMDEFEVFDVKPFVSRLLGMGDW 300
           AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIG GEHMDEFEVFDVKPFVSRLLGMGDW
Sbjct: 241 AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300

Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNLLKMGPISQVFSMLPGFSAEL 360
           SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNLLKMGPISQVFSMLPGFSAEL
Sbjct: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNLLKMGPISQVFSMLPGFSAEL 360

Query: 361 MPKGREKESQAKLKRYMTMMDSMTDEGKQKLSICSAYLFLATSVSNPKLMNESRMMRVAR 420
           MPKGREKESQAKLKRYMTMMDSMTDE                  SNPKLMNESRMMR+AR
Sbjct: 361 MPKGREKESQAKLKRYMTMMDSMTDE--------------ELDSSNPKLMNESRMMRIAR 420

Query: 421 GSGRRIQEVMEMMEEYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQILKQ 480
           GSGRRIQEVMEMMEEYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQILKQ
Sbjct: 421 GSGRRIQEVMEMMEEYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQILKQ 480

Query: 481 IGGMGGLQSLMKQMGSNKDMMGMFGGGDK 510
           IGGMGGLQSLMKQMGSNKDMMGMFGGGDK
Sbjct: 481 IGGMGGLQSLMKQMGSNKDMMGMFGGGDK 495

[Close]

BLAST of CmoCh01G001650 vs. NCBI nr
Match: XP_022955506.1 (signal recognition particle 54 kDa protein 2 [Cucurbita moschata])

HSP 1 Score: 938.3 bits (2424), Expect = 2.7e-269
Identity = 485/509 (95.28%), Postives = 488/509 (95.87%), Query Frame = 0


Query: 1   MVLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV 60
           MVLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV
Sbjct: 1   MVLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV 60

Query: 61  NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFTPKKGKTSVIMFVGLQGSGKTTTCTK 120
           NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFTPKKGK SV+MFVGLQGSGKTTTCTK
Sbjct: 61  NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFTPKKGKPSVVMFVGLQGSGKTTTCTK 120

Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAEEGVERFK 180
           YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAEEGVERFK
Sbjct: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAEEGVERFK 180

Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
           KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV
Sbjct: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240

Query: 241 AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGIGEHMDEFEVFDVKPFVSRLLGMGDW 300
           AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIG GEHMDEFEVFDVKPFVSRLLGMGDW
Sbjct: 241 AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300

Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNLLKMGPISQVFSMLPGFSAEL 360
           SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQ LLKMGPISQVFSMLPGFSAEL
Sbjct: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQKLLKMGPISQVFSMLPGFSAEL 360

Query: 361 MPKGREKESQAKLKRYMTMMDSMTDEGKQKLSICSAYLFLATSVSNPKLMNESRMMRVAR 420
           MPKGREKESQAKLKRYMTMMDSMTDE                  SNPKLMNESRMMR+AR
Sbjct: 361 MPKGREKESQAKLKRYMTMMDSMTDE--------------ELDSSNPKLMNESRMMRIAR 420

Query: 421 GSGRRIQEVMEMMEEYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQILKQ 480
           GSGRR+QEVMEMMEEYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQILKQ
Sbjct: 421 GSGRRVQEVMEMMEEYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQILKQ 480

Query: 481 IGGMGGLQSLMKQMGSNKDMMGMFGGGDK 510
           IGGMGGLQSLMKQMGSNKDMMGMFGGGDK
Sbjct: 481 IGGMGGLQSLMKQMGSNKDMMGMFGGGDK 495

[Close]

BLAST of CmoCh01G001650 vs. TAIR 10
Match: AT1G48900.1 (Signal recognition particle, SRP54 subunit protein )

HSP 1 Score: 856.3 bits (2211), Expect = 1.3e-248
Identity = 429/509 (84.28%), Postives = 470/509 (92.34%), Query Frame = 0


Query: 1   MVLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV 60
           MVLA+LGG I+RA+QQMSN T+IDEK LNECLNEITRALLQSDV F LV++MQ+NIKKIV
Sbjct: 1   MVLAELGGRITRAIQQMSNVTIIDEKALNECLNEITRALLQSDVSFPLVKEMQSNIKKIV 60

Query: 61  NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFTPKKGKTSVIMFVGLQGSGKTTTCTK 120
           NL+DLAAGHNKR+II+QA+F+ELCKMLDPGKP+F PKK K SV+MFVGLQG+GKTTTCTK
Sbjct: 61  NLEDLAAGHNKRRIIEQAIFSELCKMLDPGKPAFAPKKAKASVVMFVGLQGAGKTTTCTK 120

Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAEEGVERFK 180
           YAYYHQKKG+KPALVCADTFRAGAFDQLKQNATKAKIPFYGSY ESDPVKIA EGV+ FK
Sbjct: 121 YAYYHQKKGYKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVKIAVEGVDTFK 180

Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
           KENCDLIIVDTSGRHKQEA+LFEEMRQV+EATKPDLVIFVMDSSIGQAAFDQAQAFKQSV
Sbjct: 181 KENCDLIIVDTSGRHKQEASLFEEMRQVAEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240

Query: 241 AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGIGEHMDEFEVFDVKPFVSRLLGMGDW 300
           AVGAVI+TKMDGHAKGGGALSAVAATKSPVIFIG GEHMDEFEVFDVKPFVSRLLGMGDW
Sbjct: 241 AVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300

Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNLLKMGPISQVFSMLPGFSAEL 360
           SGF+DK+ EVVP DQQPELL+KLS+GNFTLRIMY+QFQN+L MGP+ +VFSMLPG SAE+
Sbjct: 301 SGFVDKLQEVVPKDQQPELLEKLSQGNFTLRIMYDQFQNILNMGPLKEVFSMLPGISAEM 360

Query: 361 MPKGREKESQAKLKRYMTMMDSMTDEGKQKLSICSAYLFLATSVSNPKLMNESRMMRVAR 420
           MPKG EKESQAK+KRYMTMMDSMT++                  SNPK+ NESRMMR+AR
Sbjct: 361 MPKGHEKESQAKIKRYMTMMDSMTND--------------ELDSSNPKVFNESRMMRIAR 420

Query: 421 GSGRRIQEVMEMMEEYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQILKQ 480
           GSGR+++EVMEM+EEYKRLAK+WSKMKGLKIPK G+MSALSRNMNAQHMSKVLPPQ+LKQ
Sbjct: 421 GSGRQVREVMEMLEEYKRLAKIWSKMKGLKIPKNGDMSALSRNMNAQHMSKVLPPQMLKQ 480

Query: 481 IGGMGGLQSLMKQMGSNKDMMGMFGGGDK 510
           IGGMGGLQSLMKQMGS KDMMGMFGGGDK
Sbjct: 481 IGGMGGLQSLMKQMGSGKDMMGMFGGGDK 495

[Close]

BLAST of CmoCh01G001650 vs. TAIR 10
Match: AT1G15310.1 (signal recognition particle 54 kDa subunit )

HSP 1 Score: 740.0 bits (1909), Expect = 1.3e-213
Identity = 383/509 (75.25%), Postives = 435/509 (85.46%), Query Frame = 0


Query: 1   MVLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV 60
           MVLA+LGG I+RA+QQM+N T+IDEKVLN+ LNEITRALLQSDV F LV  MQTNIKKIV
Sbjct: 1   MVLAELGGRITRAIQQMNNVTIIDEKVLNDFLNEITRALLQSDVSFGLVEKMQTNIKKIV 60

Query: 61  NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFTPKKGKTSVIMFVGLQGSGKTTTCTK 120
           NLDDLAAGHNKR II+QA+F ELC+MLDPGKP+F PKK K SV+MFVGLQG+GKTTTCTK
Sbjct: 61  NLDDLAAGHNKRLIIEQAIFKELCRMLDPGKPAFAPKKAKPSVVMFVGLQGAGKTTTCTK 120

Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAEEGVERFK 180
           YAYYHQKKG+K ALVCADTFRAGAFDQLKQNATKAKIPFYGSY ESDPVKIA EGV+RFK
Sbjct: 121 YAYYHQKKGYKAALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVKIAVEGVDRFK 180

Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
           KE CDLIIVDTSGRHKQ A+LFEEMRQV+EAT+PDLVIFVMDSSIGQAAF+QA+AFK++V
Sbjct: 181 KEKCDLIIVDTSGRHKQAASLFEEMRQVAEATEPDLVIFVMDSSIGQAAFEQAEAFKETV 240

Query: 241 AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGIGEHMDEFEVFDVKPFVSRLLGMGDW 300
           +VGAVI+TKMDGHAKGGGALSAVAATKSPVIFIG GEHMDEFEVFDVKPFVSRLLG GDW
Sbjct: 241 SVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGKGDW 300

Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNLLKMGPISQVFSMLPGFSAEL 360
           SG +DK+ EVVP D Q EL++ LS+GNFTLR MY+QFQ  L++ P++Q+FSMLPG SAE+
Sbjct: 301 SGLVDKLQEVVPKDLQNELVENLSQGNFTLRSMYDQFQCSLRI-PLNQLFSMLPGISAEM 360

Query: 361 MPKGREKESQAKLKRYMTMMDSMTDEGKQKLSICSAYLFLATSVSNPKLMNESRMMRVAR 420
           MPKG  +ES+ K+KRYMTMMDSMT++                   NPK+ NESR+MR+AR
Sbjct: 361 MPKGHGEESRVKMKRYMTMMDSMTNK--------------ELDSPNPKIFNESRIMRIAR 420

Query: 421 GSGRRIQEVMEMMEEYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQILKQ 480
           GSGR ++EVMEM+EEYKR+AK    MKG+KIPK G+            MSKV+PPQ+LKQ
Sbjct: 421 GSGRLVREVMEMLEEYKRIAKT---MKGIKIPKNGD------------MSKVIPPQMLKQ 479

Query: 481 IGGMGGLQSLMKQMGSNKDMMGMFGGGDK 510
           +GGM GLQSLMKQMGS KDMMGMFGGG K
Sbjct: 481 MGGMSGLQSLMKQMGSAKDMMGMFGGGGK 479

[Close]

BLAST of CmoCh01G001650 vs. TAIR 10
Match: AT5G49500.1 (Signal recognition particle, SRP54 subunit protein )

HSP 1 Score: 739.2 bits (1907), Expect = 2.2e-213
Identity = 379/511 (74.17%), Postives = 434/511 (84.93%), Query Frame = 0


Query: 1   MVLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV 60
           MVLA+LGG I  A+Q+M+N T+IDEK LN+CLNEITRALLQSDV F LV++MQTNIKKIV
Sbjct: 1   MVLAELGGRIMSAIQKMNNVTIIDEKALNDCLNEITRALLQSDVSFPLVKEMQTNIKKIV 60

Query: 61  NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFTPKKGKTSVIMFVGLQGS--GKTTTC 120
           NL+DLAAGHNKR+II+QA+F+ELCKMLDPGK +F PKK K SV+MFVGLQG    K    
Sbjct: 61  NLEDLAAGHNKRRIIEQAIFSELCKMLDPGKSAFAPKKAKPSVVMFVGLQGEVLEKPQLV 120

Query: 121 TKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAEEGVER 180
                  ++KG+KPALVCADTFRAGAFDQLKQNATK+KIP+YGSY  SDPVKIA EGV+R
Sbjct: 121 PSMLIIIRRKGYKPALVCADTFRAGAFDQLKQNATKSKIPYYGSYTGSDPVKIAVEGVDR 180

Query: 181 FKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQ 240
           FKKENCDLIIVDTSGRHKQ+A+LFEEMRQ+SEATKPDLVIFVMDSSIGQ AF+QA+AFKQ
Sbjct: 181 FKKENCDLIIVDTSGRHKQQASLFEEMRQISEATKPDLVIFVMDSSIGQTAFEQARAFKQ 240

Query: 241 SVAVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGIGEHMDEFEVFDVKPFVSRLLGMG 300
           +VAVGAVI+TKMDGHAKGGG LSAVAATKSPVIFIG GEHMDEFEVFD KPFVSRLLG G
Sbjct: 241 TVAVGAVIITKMDGHAKGGGTLSAVAATKSPVIFIGTGEHMDEFEVFDAKPFVSRLLGNG 300

Query: 301 DWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNLLKMGPISQVFSMLPGFSA 360
           D SGF++K+ EVVP DQQPELL+ LS G FTLRIMY+QFQN+L MGP+ +VFSMLPG  A
Sbjct: 301 DMSGFVNKLQEVVPKDQQPELLEMLSHGKFTLRIMYDQFQNMLNMGPLKEVFSMLPGMRA 360

Query: 361 ELMPKGREKESQAKLKRYMTMMDSMTDEGKQKLSICSAYLFLATSVSNPKLMNESRMMRV 420
           E+MP+G EKESQAK+KRYMTMMDSMT+E                  SNPK+ NESR+MR+
Sbjct: 361 EMMPEGHEKESQAKIKRYMTMMDSMTNE--------------ELDSSNPKVFNESRIMRI 420

Query: 421 ARGSGRRIQEVMEMMEEYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQIL 480
           ARGSGR ++EVMEM+EEYKRL  +W K+KGLK  +KG MSALS+N N+Q +SKVLP Q+L
Sbjct: 421 ARGSGRIVREVMEMLEEYKRLTTMWGKVKGLKNLEKGNMSALSKNKNSQQLSKVLPAQML 480

Query: 481 KQIGGMGGLQSLMKQMGSNKDMMGMFGGGDK 510
           KQIGGM GLQSLMKQMGS KD+MGMFGG D+
Sbjct: 481 KQIGGMSGLQSLMKQMGSGKDLMGMFGGRDE 497

[Close]

BLAST of CmoCh01G001650 vs. TAIR 10
Match: AT1G48900.2 (Signal recognition particle, SRP54 subunit protein )

HSP 1 Score: 716.1 bits (1847), Expect = 2.0e-206
Identity = 357/432 (82.64%), Postives = 395/432 (91.44%), Query Frame = 0


Query: 1   MVLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV 60
           MVLA+LGG I+RA+QQMSN T+IDEK LNECLNEITRALLQSDV F LV++MQ+NIKKIV
Sbjct: 1   MVLAELGGRITRAIQQMSNVTIIDEKALNECLNEITRALLQSDVSFPLVKEMQSNIKKIV 60

Query: 61  NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFTPKKGKTSVIMFVGLQGSGKTTTCTK 120
           NL+DLAAGHNKR+II+QA+F+ELCKMLDPGKP+F PKK K SV+MFVGLQG+GKTTTCTK
Sbjct: 61  NLEDLAAGHNKRRIIEQAIFSELCKMLDPGKPAFAPKKAKASVVMFVGLQGAGKTTTCTK 120

Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAEEGVERFK 180
           YAYYHQKKG+KPALVCADTFRAGAFDQLKQNATKAKIPFYGSY ESDPVKIA EGV+ FK
Sbjct: 121 YAYYHQKKGYKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVKIAVEGVDTFK 180

Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
           KENCDLIIVDTSGRHKQEA+LFEEMRQV+EATKPDLVIFVMDSSIGQAAFDQAQAFKQSV
Sbjct: 181 KENCDLIIVDTSGRHKQEASLFEEMRQVAEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240

Query: 241 AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGIGEHMDEFEVFDVKPFVSRLLGMGDW 300
           AVGAVI+TKMDGHAKGGGALSAVAATKSPVIFIG GEHMDEFEVFDVKPFVSRLLGMGDW
Sbjct: 241 AVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300

Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNLLKMGPISQVFSMLPGFSAEL 360
           SGF+DK+ EVVP DQQPELL+KLS+GNFTLRIMY+QFQN+L MGP+ +VFSMLPG SAE+
Sbjct: 301 SGFVDKLQEVVPKDQQPELLEKLSQGNFTLRIMYDQFQNILNMGPLKEVFSMLPGISAEM 360

Query: 361 MPKGREKESQAKLKRYMTMMDSMTDEGKQKLSICSAYLFLATSVSNPKLMNESRMMRVAR 420
           MPKG EKESQAK+KRYMTMMDSMT++                  SNPK+ NESRMMR+AR
Sbjct: 361 MPKGHEKESQAKIKRYMTMMDSMTND--------------ELDSSNPKVFNESRMMRIAR 418

Query: 421 GSGRRIQEVMEM 433
           GSGR+++EVME+
Sbjct: 421 GSGRQVREVMEI 418

[Close]

BLAST of CmoCh01G001650 vs. TAIR 10
Match: AT5G03940.1 (chloroplast signal recognition particle 54 kDa subunit )

HSP 1 Score: 196.4 bits (498), Expect = 5.4e-50
Identity = 140/510 (27.45%), Postives = 248/510 (48.63%), Query Frame = 0


Query: 2   VLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIVN 61
           +  QL G +  A  ++    V+ +  + E + +I RALL++DV   +VR    ++     
Sbjct: 77  MFGQLTGGLEAAWSKLKGEEVLTKDNIAEPMRDIRRALLEADVSLPVVRRFVQSVSDQAV 136

Query: 62  LDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFTPKKGKTSVIMFVGLQGSGKTTTCTKY 121
              +  G    + + + V +EL K++          K   +VI+  GLQG GKTT C K 
Sbjct: 137 GMGVIRGVKPDQQLVKIVHDELVKLMGGEVSELQFAKSGPTVILLAGLQGVGKTTVCAKL 196

Query: 122 AYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAEEGVERFKK 181
           A Y +K+G    L+  D +R  A DQL     +  +P Y +  +  P  IA++G++  KK
Sbjct: 197 ACYLKKQGKSCMLIAGDVYRPAAIDQLVILGEQVGVPVYTAGTDVKPADIAKQGLKEAKK 256

Query: 182 ENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSVA 241
            N D++I+DT+GR + +  + +E++ V +   P  V+ V+D+  GQ A      F   + 
Sbjct: 257 NNVDVVIMDTAGRLQIDKGMMDELKDVKKFLNPTEVLLVVDAMTGQEAAALVTTFNVEIG 316

Query: 242 VGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGIGEHMDEFEVFDVKPFVSRLLGMGDWS 301
           +   I+TK+DG ++GG ALS    +  P+  +G GE M++ E F       R+LGMGD  
Sbjct: 317 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 376

Query: 302 GFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNLLKMGPISQVFSMLPGFSAELM 361
            F++K  EV+  +   +L +K+    F      +Q + + KMG +++V  M+PG     +
Sbjct: 377 SFVEKATEVMRQEDAEDLQKKIMSAKFDFNDFLKQTRAVAKMGSMTRVLGMIPGMGK--V 436

Query: 362 PKGREKESQAKLKRYMTMMDSMTDEGKQKLSICSAYLFLATSVSNPKLMNES--RMMRVA 421
              + +E++  L     M++ MT E +++                P+L+ ES  R  R+A
Sbjct: 437 SPAQIREAEKNLLVMEAMIEVMTPEERER----------------PELLAESPERRKRIA 496

Query: 422 RGSGRRIQEVMEMMEEYKRLAKVWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPPQIL 481
           + SG+  Q+V  ++ +   + ++  KMK L  + + G + ALS   +A    +  PP   
Sbjct: 497 KDSGKTEQQVSALVAQ---IFQMRVKMKNLMGVMEGGSIPALSGLEDALKAEQKAPPGTA 556

Query: 482 KQIGGMGGLQSLMKQMGSNKDMMGMFGGGD 509
           ++       +  ++   S     G FG G+
Sbjct: 557 RRKRKADSRKKFVESASSKPGPRG-FGSGN 564

The following BLAST results are available for this feature:

BLAST of CmoCh01G001650 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P49972	1.7e-258	89.28	Signal recognition particle 54 kDa protein 2 OS=Solanum lycopersicum OX=4081 PE=...	[more]
P49967	1.8e-247	84.28	Signal recognition particle 54 kDa protein 3 OS=Arabidopsis thaliana OX=3702 GN=...	[more]
P49971	5.9e-243	85.63	Signal recognition particle 54 kDa protein 1 OS=Solanum lycopersicum OX=4081 PE=...	[more]
P49969	3.4e-230	81.03	Signal recognition particle 54 kDa protein 2 OS=Hordeum vulgare OX=4513 GN=SRP54...	[more]
P49968	2.8e-229	80.83	Signal recognition particle 54 kDa protein 1 OS=Hordeum vulgare OX=4513 GN=SRP54...	[more]

BLAST of CmoCh01G001650 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G940	6.3e-272	96.46	Signal recognition particle 54 kDa protein OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A6J1KE35	3.1e-271	96.07	Signal recognition particle 54 kDa protein OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]
A0A6J1GTY4	1.3e-269	95.28	Signal recognition particle 54 kDa protein OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A5A7TRJ6	6.5e-269	94.89	Signal recognition particle 54 kDa protein OS=Cucumis melo var. makuwa OX=119469...	[more]
A0A1S3BY04	5.5e-268	94.70	Signal recognition particle 54 kDa protein OS=Cucumis melo OX=3656 GN=LOC1034946...	[more]

BLAST of CmoCh01G001650 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022948401.1	1.3e-271	96.46	signal recognition particle 54 kDa protein 2-like [Cucurbita moschata]	[more]
XP_023523909.1	4.9e-271	96.27	signal recognition particle 54 kDa protein 2 isoform X1 [Cucurbita pepo subsp. p...	[more]
KAG6606813.1	6.4e-271	96.27	hypothetical protein SDJN03_00155, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022998349.1	6.4e-271	96.07	signal recognition particle 54 kDa protein 2 [Cucurbita maxima]	[more]
XP_022955506.1	2.7e-269	95.28	signal recognition particle 54 kDa protein 2 [Cucurbita moschata]	[more]

BLAST of CmoCh01G001650 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G48900.1	1.3e-248	84.28	Signal recognition particle, SRP54 subunit protein	[more]
AT1G15310.1	1.3e-213	75.25	signal recognition particle 54 kDa subunit	[more]
AT5G49500.1	2.2e-213	74.17	Signal recognition particle, SRP54 subunit protein	[more]
AT1G48900.2	2.0e-206	82.64	Signal recognition particle, SRP54 subunit protein	[more]
AT5G03940.1	5.4e-50	27.45	chloroplast signal recognition particle 54 kDa subunit	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003593	AAA+ ATPase domain	SMART	SM00382	AAA_5	coord: 100..277 e-value: 1.7E-5 score: 34.2
IPR013822	Signal recognition particle SRP54, helical bundle	SMART	SM00963	SRP54_N_2	coord: 2..87 e-value: 3.5E-13 score: 59.8
IPR013822	Signal recognition particle SRP54, helical bundle	PFAM	PF02881	SRP54_N	coord: 6..83 e-value: 2.6E-15 score: 56.4
IPR000897	Signal recognition particle, SRP54 subunit, GTPase domain	SMART	SM00962	SRP54_3	coord: 101..296 e-value: 3.2E-95 score: 332.3
IPR000897	Signal recognition particle, SRP54 subunit, GTPase domain	PFAM	PF00448	SRP54	coord: 102..296 e-value: 2.7E-78 score: 262.1
IPR000897	Signal recognition particle, SRP54 subunit, GTPase domain	PROSITE	PS00300	SRP54	coord: 269..282
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 91..285 e-value: 9.7E-128 score: 427.3
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 95..298
IPR036891	Signal recognition particle, SRP54 subunit, M-domain superfamily	GENE3D	1.10.260.30		coord: 312..450 e-value: 5.5E-41 score: 141.6
IPR036891	Signal recognition particle, SRP54 subunit, M-domain superfamily	SUPERFAMILY	47446	Signal peptide-binding domain	coord: 298..447
IPR004125	Signal recognition particle, SRP54 subunit, M-domain	PFAM	PF02978	SRP_SPB	coord: 327..442 e-value: 2.9E-25 score: 88.8
IPR042101	Signal recognition particle SRP54, N-terminal domain superfamily	GENE3D	1.20.120.140		coord: 5..306 e-value: 9.7E-128 score: 427.3
IPR006325	Signal recognition particle, SRP54 subunit, eukaryotic	TIGRFAM	TIGR01425	TIGR01425	coord: 2..441 e-value: 2.1E-218 score: 723.3
None	No IPR available	PANTHER	PTHR11564:SF33	SIGNAL RECOGNITION PARTICLE 54 KDA PROTEIN	coord: 1..508
None	No IPR available	CDD	cd17875	SRP54_G	coord: 102..294 e-value: 3.4431E-140 score: 399.645
IPR022941	Signal recognition particle, SRP54 subunit	PANTHER	PTHR11564	SIGNAL RECOGNITION PARTICLE 54K PROTEIN SRP54	coord: 1..508
IPR022941	Signal recognition particle, SRP54 subunit	HAMAP	MF_00306	SRP54	coord: 6..491 score: 34.608784
IPR036225	SRP/SRP receptor, N-terminal	SUPERFAMILY	47364	Domain of the SRP/SRP receptor G-proteins	coord: 1..94

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh01G001650.1	CmoCh01G001650.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006616	SRP-dependent cotranslational protein targeting to membrane, translocation
biological_process	GO:0006614	SRP-dependent cotranslational protein targeting to membrane
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005786	signal recognition particle, endoplasmic reticulum targeting
cellular_component	GO:0048500	signal recognition particle
molecular_function	GO:0008312	7S RNA binding
molecular_function	GO:0030942	endoplasmic reticulum signal peptide binding
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding