CmoCh01G001330 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh01G001330
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Unknown protein
Location	Cmo_Chr01: 578908 .. 579993 (+)
RNA-Seq Expression	CmoCh01G001330
Synteny	CmoCh01G001330

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTATTGTGGTGTCGTAAGTCTCTTCTCACCATTATTGTAGAAAACTTGTGATTCTGCTCTGAAAGTTAATATATGTGGAAAGGAGACGGATTTTTTTATTTACGAGTGGTTTTCCATATTTTCTCTTCCACTTTTTTTTCCTAACTAAAAATTTTGGAAGGAAAATCATATTATTTAGGTGATTTCGTTTTCAGAAAATATAATTAAGGTATTGATATCCCAGCATTTTAGGACATAACGTAATTATTGAAATTTGTTATTATCTCTCAAGTTATCTCGATAATTGATAATCACAACATTTTATTTAATAATATAGAAAGAAATAAGTTAGTTTGAAATTTCGTCCCAAGCCTTGCCAAAGACGTCAATTTTTTTGTCAATCAATTGTTTTAAAAAAAATTAAGTGCTACAAAAATATTATGTTCCCTTTGGTCACGTTATAGTTTTTTCTTTATAAATATATTTTAAAAATACTAGTGGACTCTACCATATGCTTTAAAAAAAAATTGAGTTGACAAGCCATTTAAATATATCTTCATTCAACCAAAAAAATAAAAATAAAAATAAATAATACATGTGTGTTGGTGTAGTTCCCCTAAAATATAATACTAGTAGTTTCAAAAAATGAAATTGATTTATCGATATTAAAAATCATTATGTATTTGAATTTCTAATTTTAAGTTTAATAGGTTATTTATTTAAAATTAGTTTAAAATTTACAAATTAAATACGATATTAAAAATTCAGAATCCTATTAAAAAAAAATTAATTTTAGTACGTCAGACACTGATTAAAATTTAATTAGTTTAGGGATTATTAAATTTAAAATTGGAATTTTATAAACATAGTAAAATACAAGTGGGTAATTTAAGTGGGAAAATTTTCGCACGGCACGTGTCATGTAATAGCCTCGTGCCAAACCATCGGGTACTGTACCACCCTCGGCCTCAGCCGGATCTCCACTTGACTTATTCTACATTTCTCCACTTACAAAACCAAAACGCTGAGGAAGAAGAAGAAGAAGGAGAGAGAGAGAGAGACAGAGACAGAGAGGGTAATCAGTTCGCCGTCGAAGGGGAGTGA

mRNA sequence

ATGGTATTGTGGTGTCGTAAGTCTCTTCTCACCATTATTGTAGAAAACTTTAAAATACAAGTGGGTAATTTAAGTGGGAAAATTTTCGCACGGCACGTGTCATGTAATAGCCTCGTGCCAAACCATCGGGTACTGTACCACCCTCGGCCTCAGCCGGATCTCCACTTGACTTATTCTACATTTCTCCACTTACAAAACCAAAACGCTGAGGAAGAAGAAGAAGAAGGAGAGAGAGAGAGAGACAGAGACAGAGAGGGTAATCAGTTCGCCGTCGAAGGGGAGTGA

Coding sequence (CDS)

ATGGTATTGTGGTGTCGTAAGTCTCTTCTCACCATTATTGTAGAAAACTTTAAAATACAAGTGGGTAATTTAAGTGGGAAAATTTTCGCACGGCACGTGTCATGTAATAGCCTCGTGCCAAACCATCGGGTACTGTACCACCCTCGGCCTCAGCCGGATCTCCACTTGACTTATTCTACATTTCTCCACTTACAAAACCAAAACGCTGAGGAAGAAGAAGAAGAAGGAGAGAGAGAGAGAGACAGAGACAGAGAGGGTAATCAGTTCGCCGTCGAAGGGGAGTGA

Protein sequence

MVLWCRKSLLTIIVENFKIQVGNLSGKIFARHVSCNSLVPNHRVLYHPRPQPDLHLTYSTFLHLQNQNAEEEEEEGERERDRDREGNQFAVEGE

Homology

The following BLAST results are available for this feature:

BLAST of CmoCh01G001330 vs.


Match Name	E-value	Identity	Description

BLAST of CmoCh01G001330 vs.


Match Name	E-value	Identity	Description

BLAST of CmoCh01G001330 vs.


Match Name	E-value	Identity	Description

BLAST of CmoCh01G001330 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 62..86
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 66..94
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 79..94

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh01G001330.1	CmoCh01G001330.1	mRNA